BLAST of Cp4.1LG03g07390 vs. Swiss-Prot
Match:
C3H41_ARATH (Zinc finger CCCH domain-containing protein 41 OS=Arabidopsis thaliana GN=At3g27700 PE=1 SV=1)
HSP 1 Score: 588.6 bits (1516), Expect = 1.2e-166
Identity = 389/877 (44.36%), Postives = 531/877 (60.55%), Query Frame = 1
Query: 1 MELKVSYPKLGI-SSSEYVSDPEEK-DISDDEDDDRNHKHRRR-ETRSQSLERDTREHVL 60
MEL VS PK + S + +SDPEE+ +IS++EDDDRNHKHRR+ ETRSQSLE+D+ +
Sbjct: 1 MELSVSSPKQSVLSPPDCMSDPEEEHEISEEEDDDRNHKHRRKEETRSQSLEQDSSDQAF 60
Query: 61 -RPYGKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGD 120
RPY K + ENG S ++ +KR G G R+ D
Sbjct: 61 SRPYRKNYRHYENGNSFSEH------------------------EKRSFGTGSGQRVQFD 120
Query: 121 FNQRIRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGL 180
NQR+R+N FS D GRGRG G+W Q DSRF+PVD++S +V G +F GRGL
Sbjct: 121 -NQRMRSNPMFSRDSGPGRGRG-NYGSWAQRDSRFNPVDLSSHMVQVGSMGQGMFGGRGL 180
Query: 181 PSVSTAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEER 240
VS AQ+APW FG++PG+PN GL+ H LQG+LRPP+N PLN+GIPRQRCRDFEER
Sbjct: 181 AGVSAAQSAPWPPFGMIPGVPNGGLDGFH--HLQGSLRPPLNAPLNMGIPRQRCRDFEER 240
Query: 241 GFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTSTTVMS 300
GFCLRGDMCPMEHG+NRIVV+DVQSLSQFNLP+S+P A + ++ +PA + M+
Sbjct: 241 GFCLRGDMCPMEHGMNRIVVDDVQSLSQFNLPVSVPGAPHLAASSKQVPA-QFGGASFMN 300
Query: 301 GKGLLGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSS 360
KG G+ ++ G+ D L + Y +G D YDPDQPLWNN+ E A+S ++S
Sbjct: 301 PKGAHGRTNEGGMAVDGLGYGDAYPSAGG---TDFYDPDQPLWNNSTGETSGAISTLNSH 360
Query: 361 KIDDVESLMGDDPSDRNQVRKCDAADNGCSSRITATSGSQGTSSSVWGRV-GSRNRQDVK 420
+D+ + + D NQ DAA+NGC R S+ TS SVWGR+ GS ++ + K
Sbjct: 361 GVDENVAPL----DDSNQ----DAAENGCGIR-----DSRSTSQSVWGRMKGSNSQANSK 420
Query: 421 GKLDPV-NSSGCLDNEVKEHNEVLTSVQGNSH-QQKHMAQGDAH-TEAGNLPHKALNDAN 480
K D V NSS ++++KE SV + H +Q H+ + A ++ N+ + +N+
Sbjct: 421 EKADAVLNSSAVPEDQLKE-----VSVNSSRHGKQNHVGESVAKVVDSSNISNDMMNNT- 480
Query: 481 AMRTMRKPSQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKR 540
RKP+QKA+RTLFVN +P +SN+ + +L+HF+K+G+VIDI+IP NS+RAFVQFSKR
Sbjct: 481 -----RKPTQKAMRTLFVNYVPHESNRRDLILAHFQKFGKVIDIHIPVNSERAFVQFSKR 540
Query: 541 EEAEAALKSPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHI---AAVSLLPLVV 600
EEAE+AL++PDAVMGNRFIKLWWANRDSIPD G+ + +G + R + A + P+
Sbjct: 541 EEAESALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGSGASMKGRSMTASGAQNQFPIAA 600
Query: 601 KGKNSVQVSTSKGSVSHPLESSLAAPDHSH-------AFSSPKVSSPLQKKLENLEQLKE 660
K++ S +K P + AP S S PKV+ QKK + LE+LKE
Sbjct: 601 ASKSNHVSSIAK----VPTFQTGGAPSSSEQPKPVVVTTSGPKVTPLQQKKADTLERLKE 660
Query: 661 ELRKKQEMLDMKRNDFRRQLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKAS 720
LRKKQEML+ KRN++R++L LEKQ T K E AKR+K+ AS
Sbjct: 661 TLRKKQEMLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKL-----------DTAS 720
Query: 721 DSGIALASPHTEASGEHVECPCPEP------TTSIVQQESSKFEPVHPLSSETPFD---V 780
DSG A+ASP TE+S + + P +P +T +S F+ P S T + V
Sbjct: 721 DSGAAIASPKTESSTDK-KVPILKPLSTAKLSTETPSPDSKNFKQ-RPYSFTTSLNAPMV 780
Query: 781 DGDKSGSCSTGFRVVPPLPVDFANEDVIKKHFSSLGDVCTVELVSEDGDRISNASNNCSA 840
+ K + +T +VVPPLP A+ V+K+HFSS G+V VEL ED I + ++ +
Sbjct: 781 NRYKLDNRTTTIKVVPPLPTGLADVAVVKEHFSSYGEVSKVEL--EDNASIDSGKDHETQ 802
Query: 841 N------VTFLTRHSAERAFKDGKSWQGQDLKLIWLS 845
N VTF+ R +AE+AF + K WQ L+L+W++
Sbjct: 841 NESRAACVTFVKRSAAEKAFANAKCWQEHTLQLVWVT 802
BLAST of Cp4.1LG03g07390 vs. Swiss-Prot
Match:
C3H27_ORYSJ (Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica GN=Os04g0394300 PE=2 SV=2)
HSP 1 Score: 494.2 bits (1271), Expect = 3.0e-138
Identity = 346/866 (39.95%), Postives = 484/866 (55.89%), Query Frame = 1
Query: 13 SSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPYGKRSKPSENGRS 72
S+SE +D E+ +ISDD+DDDRNHKHR+RE R QS + +T + P KR K S
Sbjct: 27 SNSEAATDNEDFEISDDDDDDRNHKHRKREARPQSFDENTEQSPGGPLKKRHKISGGA-- 86
Query: 73 IRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFNQRIRANQTFSGDLS 132
D+ +A +KD KF +R PGA G ++ R N +F +
Sbjct: 87 --DSHGEA------------QKDFFPKFKRR-----PGA---GAHSRAPRVNPSFRDSSA 146
Query: 133 S-------GRGRGRESGTWNQFDSRFSP---VDIASQIVHRGP-FPPSLFAGRGLPSVST 192
S RGRGR W Q + RF+ +D ASQ+ +GP PSLF G LPS +
Sbjct: 147 SVAARAPMTRGRGRNGAPWAQHEPRFNTLEMIDFASQMASQGPPTHPSLFMGPALPSGGS 206
Query: 193 AQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCLR 252
AQ W +G +PG+PN L+ +HP+G+QG ++P I+P +++G+PRQRCRDFEERGFCLR
Sbjct: 207 AQNGSWGPYGFMPGMPNGMLDPIHPLGMQGPIQPAISPLIDLGMPRQRCRDFEERGFCLR 266
Query: 253 GDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTSTTVMSG-KGL 312
GDMCPMEHG+NRIVVED+QSLSQFNLP+++PN +G + P + +T+ + G KG+
Sbjct: 267 GDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGLG--IQNEPGTAPVNTSSLGGSKGV 326
Query: 313 LGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGM-HSSKID 372
K+ K V +D L +G + + + ++AD+YDPDQPLWNN E P+A +G H+ +
Sbjct: 327 PAKDIKSAVTNDVLKLNG--TTALAVSDADVYDPDQPLWNN---EHPDASAGFAHTDGVW 386
Query: 373 DVESLMGDDPSDRNQVRKCDAADNGCSSRITATSGSQGTSSSVWGRVGSRNRQDVKGKLD 432
+ ESL + ++ +++ A SQ + SSVWGR+ S+ GK
Sbjct: 387 NAESLGYEAAREQ-------------GNQVLAADSSQNSKSSVWGRIASKKLG--HGKTA 446
Query: 433 PVNSSGCLDNEVKE-HNEVLTSVQGNSHQQKHMAQGDAHTEAGNLPHKALNDANAMRTMR 492
S+ N+ E ++E+ S H+ A G + D R
Sbjct: 447 NATSTSATGNKRNESYDEMAPST-------VHVNPASAKDSNGQSNSRIFGDVG--RQSN 506
Query: 493 KPSQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAA 552
+ S KA RTL+VNGIPL+SN+ E LLSHF+K+G+VIDIYIP+NS++AFVQFSKREEAEAA
Sbjct: 507 RASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFVQFSKREEAEAA 566
Query: 553 LKSPDAVMGNRFIKLWWANRDSIPDAGVG--SNNGIHVPPRHIAAVSLLPLVVKGKNSVQ 612
LK+PDAVMGNRFIKLWWANRD IPD G H+ +V +GK ++Q
Sbjct: 567 LKAPDAVMGNRFIKLWWANRDRIPDEVEGRIPAKSSHMSAALANSVPQPSSSNRGKENLQ 626
Query: 613 VSTSKGSVSHPLESSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRN 672
+T + S E+S H ++ S P K + +L EELRKKQE+L KR+
Sbjct: 627 SATPRASSGSSAEASGPGTGHKMLPANSVKSLPPDTKRQESLELLEELRKKQEILAQKRD 686
Query: 673 DFRRQLDKLEKQATGNKGETVVGFSAKRLKVG----IEADASKLVTPKASDSGI-----A 732
+FRRQL+KL KQ KG + SAK+ + G D ++ K+ ++G A
Sbjct: 687 EFRRQLEKLAKQ----KG---LANSAKQAEAGGKEVASNDVHRVTDSKSMNTGTEGPRDA 746
Query: 733 LASPHTEASGEHVECPCPEPTTSIVQQESSKFEPVHPL--SSETPFDVDGDKSGSCSTGF 792
+ SGE TS Q+ + + PL S+ F +D + +T F
Sbjct: 747 AGTLQNRTSGELASSSHKSSATS-AQKPAVATKQTSPLLVPSQNRFKLD-----NRTTSF 806
Query: 793 RVVPPLPVDFANEDVIKKHFSSLGDVCTVELVSEDG---DRISNASNNCSANVTFLTRHS 849
R++PPLP + A+E V+K HF S G++ +V L + D S +CSA VT+ TR S
Sbjct: 807 RILPPLPPEIADESVLKDHFMSFGELSSVVLEDTEAYNHDATLKPSLSCSACVTYTTRQS 824
BLAST of Cp4.1LG03g07390 vs. Swiss-Prot
Match:
RBM26_MOUSE (RNA-binding protein 26 OS=Mus musculus GN=Rbm26 PE=1 SV=2)
HSP 1 Score: 66.6 bits (161), Expect = 1.5e-09
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 217 INPPLNIGIPRQRCRDFEERGFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLP 273
+ PP+ P++RCRD++E+GFC+RGDMCP +HG + +VVEDV NLP LP
Sbjct: 285 VRPPM----PKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDV------NLPGMLP 330
BLAST of Cp4.1LG03g07390 vs. Swiss-Prot
Match:
RBM26_HUMAN (RNA-binding protein 26 OS=Homo sapiens GN=RBM26 PE=1 SV=3)
HSP 1 Score: 66.6 bits (161), Expect = 1.5e-09
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 217 INPPLNIGIPRQRCRDFEERGFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLP 273
+ PP+ P++RCRD++E+GFC+RGDMCP +HG + +VVEDV NLP LP
Sbjct: 285 VRPPM----PKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDV------NLPGMLP 330
BLAST of Cp4.1LG03g07390 vs. Swiss-Prot
Match:
RBM26_XENLA (RNA-binding protein 26 OS=Xenopus laevis GN=rbm26 PE=2 SV=2)
HSP 1 Score: 62.4 bits (150), Expect = 2.9e-08
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 227 RQRCRDFEERGFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLP 273
++RCRD++E+GFC+RGDMCP +HG + +VVEDV NLP LP
Sbjct: 330 KKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDV------NLPGILP 369
BLAST of Cp4.1LG03g07390 vs. TrEMBL
Match:
A0A0A0LI12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G838750 PE=4 SV=1)
HSP 1 Score: 1357.8 bits (3513), Expect = 0.0e+00
Identity = 694/777 (89.32%), Postives = 719/777 (92.54%), Query Frame = 1
Query: 1 MELKVSYPKLGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
MELKVSYPK GISS +YVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERD REHVLRPY
Sbjct: 1 MELKVSYPKPGISS-DYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDAREHVLRPY 60
Query: 61 GKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFNQR 120
GKRSKP ENGRS RDNDSQANEAWKSFN PTLEKD PGKFDKRRLGAVPG R+ GDFNQR
Sbjct: 61 GKRSKPFENGRSFRDNDSQANEAWKSFNAPTLEKDTPGKFDKRRLGAVPGPRVVGDFNQR 120
Query: 121 IRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPSVS 180
IR NQ FSGDLSSGRGRGR+SGTWNQFDSRFSPVDIASQIVH G FPPSLFAGRGLPSVS
Sbjct: 121 IRGNQAFSGDLSSGRGRGRDSGTWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPSVS 180
Query: 181 TAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
TAQTAPWNAFGL+ GIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLISGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTSTTVMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHL+GKTTGSLPAVST+STTVMSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLIGKTTGSLPAVSTSSTTVMSGKGL 300
Query: 301 LGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDD 360
LGKN KP VGDDS+PFHGVYSGSGSA EADLYDPDQPLWNNNCPEKPNALSGMHSSKID+
Sbjct: 301 LGKNIKPSVGDDSMPFHGVYSGSGSAGEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDE 360
Query: 361 VESLMGDDPSDRNQVRKCDAADNGCSSRITATSGSQGTSSSVWGRVGSRNRQDVKGKLDP 420
VES +GDDPSDRNQVRKCDA DNGC+SRITA SGS TSSSVWGRVGSRNRQDVKGKLDP
Sbjct: 361 VESFIGDDPSDRNQVRKCDAGDNGCTSRITAPSGSHVTSSSVWGRVGSRNRQDVKGKLDP 420
Query: 421 VNSSGCLDNEVKEHNEVLTSVQGNSHQQKHMAQGDAHTEAGNLPHKALNDANAMRTMRKP 480
VN+SGCLDNEVKE N VL SVQGNSHQQKHMAQ DAHT+AG+L KA +DAN MRTMRKP
Sbjct: 421 VNASGCLDNEVKEQNVVLASVQGNSHQQKHMAQDDAHTKAGDLSLKAQSDANTMRTMRKP 480
Query: 481 SQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALK 540
SQKA TLFVNGIPLQSNKTETLLSHF KYGEVIDIYIPANSQRAFVQFSKREEAEAALK
Sbjct: 481 SQKATCTLFVNGIPLQSNKTETLLSHFNKYGEVIDIYIPANSQRAFVQFSKREEAEAALK 540
Query: 541 SPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHIAAVSLLPLVVKGKNSVQVSTS 600
SPDAVMGNRFIKLWWANRDSIPD GV SNNGIHVPPRHIAA SL L VKGKNSV VSTS
Sbjct: 541 SPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVPPRHIAAASLPSLAVKGKNSVPVSTS 600
Query: 601 KGSVSHPLESSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRNDFRR 660
KGS+SHPLESSLA PDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQ+MLDMKRNDFRR
Sbjct: 601 KGSISHPLESSLAGPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQQMLDMKRNDFRR 660
Query: 661 QLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIALASPHTEASGEHV 720
QLDKLEKQATGNK E V G SAKRLKVGIEAD SKLV PKASDS +AL+SPHTE +GEH
Sbjct: 661 QLDKLEKQATGNKVEAVTGSSAKRLKVGIEADTSKLV-PKASDSSVALSSPHTEVNGEH- 720
Query: 721 ECPCPEPTTSIVQQESSKFEPVHPLSSETPFDVDGDKSGSCSTGFRVVPPLPVDFAN 778
PEPTTSIVQQESSKFEPV P+++E PFD DG+K GSCSTGF++VPPLPVDFAN
Sbjct: 721 ----PEPTTSIVQQESSKFEPVDPMTTEEPFDNDGEKLGSCSTGFKIVPPLPVDFAN 770
BLAST of Cp4.1LG03g07390 vs. TrEMBL
Match:
F6HUX2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g00790 PE=4 SV=1)
HSP 1 Score: 880.9 bits (2275), Expect = 1.3e-252
Identity = 507/923 (54.93%), Postives = 636/923 (68.91%), Query Frame = 1
Query: 1 MELKVSYPK-LGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVL-R 60
MELKVS PK G+S S+ SDPEEK+ISD++DDDRNHKHRRRETRSQSLERD+ E VL R
Sbjct: 1 MELKVSSPKPSGLSPSDGESDPEEKEISDEDDDDRNHKHRRRETRSQSLERDSLEQVLSR 60
Query: 61 PYGKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFN 120
PY KR+KP ENG S R+NDSQ++ +WK++N +EKD GKF+KRR G AR D N
Sbjct: 61 PYRKRNKPFENGHSFRENDSQSSGSWKNYNISPMEKDFSGKFEKRRPGLATFARAPLDLN 120
Query: 121 QRIRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPS 180
QR R NQ+FSGD RGRGR+ G+WNQ D RFS VDIASQ+V +G PP L+AGRGLP+
Sbjct: 121 QRTRMNQSFSGDSGPVRGRGRDPGSWNQRDPRFSQVDIASQMV-QGSIPPGLYAGRGLPN 180
Query: 181 VSTAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGF 240
VS Q A W+ FGLLPGIPN L+++H +GLQGTLRPP++ LN IPRQRCRDFEERGF
Sbjct: 181 VSNTQNASWSGFGLLPGIPNGALDSLHSLGLQGTLRPPLSTSLNKSIPRQRCRDFEERGF 240
Query: 241 CLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTT--GSLPAVSTTSTTVMS 300
CLRGDMCPMEHG+NRIVVEDVQSLSQFNLP+SLP+AHL+G G LP+V+ +T+M+
Sbjct: 241 CLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLPSAHLLGTPAGPGPLPSVNAPPSTLMN 300
Query: 301 GKGLLGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSS 360
KG K+ KP V +D L +G +SGS A+LYDPDQPLWNN+CPE P+AL +HS
Sbjct: 301 SKGFQNKSGKPEVAEDELGLNGAFSGSAVGGGAELYDPDQPLWNNDCPETPSALLALHSP 360
Query: 361 KIDDVESLMGDDPSDRNQVRKCDAADNGCSSRITATS-GSQGTSSSVWGRV-GSRNRQDV 420
KID+ E L+ + SDR R CD +DNG + T T+ GSQ T+ SVWGR+ G+++R +
Sbjct: 361 KIDETECLLDANSSDRYHARLCDGSDNGRPVKNTGTTVGSQSTNVSVWGRIGGAKDRLEA 420
Query: 421 KGKLDPV-NSSGCLDNEVKEHNEVLTSVQGNSHQQKHMAQGDAHTEAGNLPHKALNDANA 480
K K+D V +SS L+NE KE E LTSVQG S Q K + D ++ +L + +D A
Sbjct: 421 KEKIDSVISSSDYLENEGKEDQEALTSVQGTSRQGKRIIVEDIGSKNVDLSSRTQSD--A 480
Query: 481 MRTMRKPSQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKRE 540
MR +RKPSQKALRTLFVNGIP ++N+ E LLSHF+K+GEVIDIYIP NS+RAFVQFSKRE
Sbjct: 481 MRNIRKPSQKALRTLFVNGIPQKNNRKEALLSHFRKFGEVIDIYIPLNSERAFVQFSKRE 540
Query: 541 EAEAALKSPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHIAAVSL---LPLVVK 600
EAEAAL++PDAVMGNRFIKLWWANRDS+PD + NG V P + A S+ V +
Sbjct: 541 EAEAALQAPDAVMGNRFIKLWWANRDSVPDDSISGGNGASVIPHGVTAASVPSHPSAVNR 600
Query: 601 GKNSVQVSTSKGSVSHPLESSLAAPDHSHAF--SSPKVSSPLQKKLENLEQLKEELRKKQ 660
K+++Q + K + H +++ DHS + PK PLQKKLE+LE +KEELRKKQ
Sbjct: 601 AKDNLQSAAPKVNAVHAIDAPSPTSDHSKPIVTNGPKAPPPLQKKLESLELMKEELRKKQ 660
Query: 661 EMLDMKRNDFRRQLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIAL 720
EMLD KRNDFRRQLDKLEKQATG KGE +AKR KVGI DA+K TP+ +D GIA+
Sbjct: 661 EMLDQKRNDFRRQLDKLEKQATGLKGEVGAEQAAKRPKVGIVGDAAKAATPRCTDPGIAV 720
Query: 721 ASPHTE------ASGEHVECPCPEPTTSIVQQESSKF-EPVHPLS-SETPFDVDGDKSGS 780
SP TE S E+V + +++V E + + V PL+ TP ++ K +
Sbjct: 721 GSPQTEITMDKNKSAENVVPYSSKTNSAMVLLEPTVLKQSVRPLALGGTPSQMNRYKLDN 780
Query: 781 CSTGFRVVPPLPVDFANEDVIKKHFSSLGDVCTVE---LVSEDGDRISNASNNCSANVTF 840
GFR++ PLP AN V+K+HFSS GD+ TVE L + DG S+AS NCSA + F
Sbjct: 781 RPMGFRIMAPLPTGLANVGVLKEHFSSYGDLSTVELEDLEALDGGNGSDASRNCSARIIF 840
Query: 841 LTRHSAERAFKDGKSWQGQDLKLIWL----SGSE-GEDHDGALSDDASRDADMEPESEP- 890
TR SAERAF +GK WQG +L +WL SG+E G + S DAD++P +
Sbjct: 841 TTRRSAERAFVNGKCWQGHNLHFMWLISSNSGNELGGRESSPSASKGSSDADLQPAGKVA 900
BLAST of Cp4.1LG03g07390 vs. TrEMBL
Match:
A0A061ECV5_THECC (Zinc finger family protein / RNA recognition motif-containing protein, putative OS=Theobroma cacao GN=TCM_016945 PE=4 SV=1)
HSP 1 Score: 866.3 bits (2237), Expect = 3.2e-248
Identity = 498/894 (55.70%), Postives = 622/894 (69.57%), Query Frame = 1
Query: 1 MELKVSYPKLG-ISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVL-R 60
MELKV+ PKLG +S + VSDPEEK++SD++DDDRNHKHRRRETRSQSLE D + V R
Sbjct: 1 MELKVASPKLGGLSPPDCVSDPEEKEVSDEDDDDRNHKHRRRETRSQSLETDCTDPVFTR 60
Query: 61 PYGKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFN 120
PY K +KP ENG R+N+SQA E WK++N+ L+KD+ KFD+RR G R D N
Sbjct: 61 PYRKHNKPLENGHPFRENESQAGETWKNYNSLPLDKDLTSKFDRRRPGLASLPRGHLDLN 120
Query: 121 QRIRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPS 180
QRIR+NQTFSGD GRGRGR+S +WNQ DSRF+ VDIASQ+V P LFAGRGL +
Sbjct: 121 QRIRSNQTFSGDSGPGRGRGRDSTSWNQRDSRFNSVDIASQMVQPRSVAPGLFAGRGLSN 180
Query: 181 VSTAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGF 240
V+ AQ+ W+AFGL+ GIPN GL+T+HPIGLQG LRPP+N LN+GIPRQRCRDFEERGF
Sbjct: 181 VTNAQSPSWSAFGLMSGIPNGGLDTLHPIGLQGALRPPMNSSLNMGIPRQRCRDFEERGF 240
Query: 241 CLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVS--TTSTTVMS 300
CLRGDMCPMEHG+NRIVVEDVQSLSQFNLP+++PNA L+ G P S STT+M+
Sbjct: 241 CLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVTVPNAQLLATPAGPGPLTSGVPPSTTLMN 300
Query: 301 GKGLLGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSS 360
KG+ K+SK G+ DD L +G+Y+GS SA+ ADLYDPDQPLWN N PE ALSG+HS
Sbjct: 301 SKGIHSKSSKTGMADDVLGLNGIYTGSTSASGADLYDPDQPLWNKNGPEASAALSGIHSP 360
Query: 361 KIDDVESLMGDDPSDRNQVRKCDAADNGCSSRITATSGSQGTSSSVWGRV-GSRNRQDVK 420
K+D+ E L+ DD SDR+ R D+ DN R T GSQGTS SVWGR+ GSR+R D K
Sbjct: 361 KLDEAEPLLNDDMSDRHHGRLRDSVDNELPIRGT---GSQGTSLSVWGRIGGSRSRIDTK 420
Query: 421 GKLDPVNSSGCLDNEVKEHNEVLTSVQGNSHQQKHMAQGDAHTEAGNLPHKALNDANAMR 480
K+D + SS L+NE KE E S QG S KH++ D ++ + K+ D +MR
Sbjct: 421 EKID-LTSSDYLENETKEEQEAFPSSQGTSRHVKHISTEDDGSKVMDSSFKSQTD--SMR 480
Query: 481 TMRKPSQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEA 540
RKP+QKALRTLFVNGIP +SNK E LLSHF+K+GEV+DIYIP NS+RAFVQFS+REEA
Sbjct: 481 NSRKPTQKALRTLFVNGIPQKSNKREALLSHFRKFGEVVDIYIPLNSERAFVQFSRREEA 540
Query: 541 EAALKSPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHIAAVSLLP----LVVKG 600
EAALK+PDAVMGNRFIKLWWANRDSIPD GV S +GI + PR + A S++P + +G
Sbjct: 541 EAALKAPDAVMGNRFIKLWWANRDSIPDDGVSSGSGISITPRGLTA-SVIPSQTSVANRG 600
Query: 601 KNSVQVSTSKGSVSHPLE-SSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEM 660
K+++Q K +V H + SL +P A + PKV PLQKK E LEQ+KEELRKKQEM
Sbjct: 601 KDNLQPIPQKSNVVHGADVPSLNSPKPVSA-NGPKVPPPLQKKFETLEQMKEELRKKQEM 660
Query: 661 LDMKRNDFRRQLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIALAS 720
L+ KRNDFRRQLDKLEKQ++G KG+ + +AKR KVGI AD +K TP +S+ G + A+
Sbjct: 661 LEQKRNDFRRQLDKLEKQSSGVKGDLMTEQAAKRQKVGIAADPAKASTPMSSEPGASAAT 720
Query: 721 PHT------EASGEHVECPCPEPTTSIVQQE--SSKFEPVHPLSSETPFDVDGDKSGSCS 780
P T S E+V P+ T++ QE SSK + + PF ++ K +
Sbjct: 721 PCTIGMTEKNKSTENVVSHSPKSNTTMALQESMSSKQQSRPSAPAGHPFLMNRYKLDNRP 780
Query: 781 TGFRVVPPLPVDFANEDVIKKHFSSLGDVCTVEL--VSEDGDRI-SNASNNCSANVTFLT 840
FRV+PPLP FA+ D +K+HF GD+ VEL V DGD + S A NCSA +T+ T
Sbjct: 781 PAFRVIPPLPSGFADVDALKEHFLQYGDLFAVELEEVENDGDGLGSEALKNCSALITYST 840
Query: 841 RHSAERAFKDGKSWQGQDLKLIWLSGSEGEDHDGALSDD---ASRDADMEPESE 871
R +AERAF +GK WQG +L+ WL+ + + S S DAD++ E +
Sbjct: 841 RRAAERAFVNGKCWQGNNLQFTWLTSTSNDPSSKETSSSIPKGSLDADVQREEK 886
BLAST of Cp4.1LG03g07390 vs. TrEMBL
Match:
V4U1P8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014173mg PE=4 SV=1)
HSP 1 Score: 859.4 bits (2219), Expect = 3.9e-246
Identity = 503/919 (54.73%), Postives = 633/919 (68.88%), Query Frame = 1
Query: 1 MELKVSYPK-LGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHV-LR 60
MELKVS PK +S + SDPEEK++SD++DDDRNHKHRRRETRSQSLERD+ + V +R
Sbjct: 1 MELKVSSPKPASLSPPDCTSDPEEKELSDEDDDDRNHKHRRRETRSQSLERDSLDQVYMR 60
Query: 61 PYGKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFN 120
Y KR+KP ENG S R+N+SQA+E+WK++N P LEKD KF++RR G +R D +
Sbjct: 61 SYRKRNKPFENGHSFRENESQASESWKNYNIPPLEKDFTAKFERRRPGFASLSRAPLDLS 120
Query: 121 QRIRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPS 180
QRIR N TF GDL GRGRGR+S +WNQ D+RFS VDIASQI+ PPS FAGRGLP+
Sbjct: 121 QRIRGNNTFYGDLGPGRGRGRDSASWNQRDTRFSSVDIASQILQPASMPPSRFAGRGLPN 180
Query: 181 VSTAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGF 240
+S +Q A + AFGL+PG+PN GL+T+ IGLQGTLRPP+N LN+GI RQRCRDFEERGF
Sbjct: 181 ISNSQNASF-AFGLIPGVPNGGLDTLPSIGLQGTLRPPLNSSLNMGISRQRCRDFEERGF 240
Query: 241 CLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGS--LPAVSTTSTTVMS 300
CLRGDMCPMEHG+NRIVVEDVQSLSQFNL + LP+A L+ G L +V STT+M+
Sbjct: 241 CLRGDMCPMEHGVNRIVVEDVQSLSQFNLTVPLPSAPLLATPAGPGLLSSVGAASTTLMN 300
Query: 301 GKGLLGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSS 360
KG+ K SK G+ DD + +G YS S +A ADLYDPDQPLWNNN P+ L+ +HSS
Sbjct: 301 SKGVHNKGSKTGLMDDGMGLNGAYSDSAAAGGADLYDPDQPLWNNNGPDTSPGLAALHSS 360
Query: 361 KIDDVESLMGDDPSDRNQVRKCDAADNGCSSRITATSG-SQGTSSSVWGRVG-SRNRQDV 420
D+ ESL+ +D S+ + +R D+ADN R T+ SQ TS SVWGR+G S+NR +V
Sbjct: 361 N-DETESLLNEDSSNNHHLRASDSADNDLPVRNAGTAAVSQNTSMSVWGRIGSSKNRSNV 420
Query: 421 KGKLD-PVNSSGCLDNEVKEHNEVLTSVQGNSHQQKHMAQGDAHTEAGNLPHKALNDANA 480
K K+D +NS L+NE KE E L S+QG+ H+ K + +GDA + + KA ND
Sbjct: 421 KEKIDATLNSLDYLENETKEDREALPSLQGSYHRGKRIIEGDAIQKNMDPSTKAQND--H 480
Query: 481 MRTMRKPSQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKRE 540
MR +RKPSQKALRTLFVN +PL+SN+ E LLSHF+K+GEV+DIYIP NS+RAFVQFSKRE
Sbjct: 481 MRNIRKPSQKALRTLFVNNVPLKSNRREALLSHFQKFGEVVDIYIPLNSERAFVQFSKRE 540
Query: 541 EAEAALKSPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHIAAVSL-----LPLV 600
EAEAALKSPDAVMGNRFIKLWWANRDSIPD G+ N + + + A S +
Sbjct: 541 EAEAALKSPDAVMGNRFIKLWWANRDSIPDDGISGVN-VSMTSHGMTAASFPAHTSVTNK 600
Query: 601 VKGKNSVQVSTSKGSVSHPLESSLAAPDHSHAF-SSPKVSSPLQKKLENLEQLKEELRKK 660
VK N + G++ + SL APDH +SPK PLQKKL+NLEQLKEELRKK
Sbjct: 601 VKDNNLQSTTLKGGNIVPAADVSLPAPDHPTVITNSPKPPPPLQKKLDNLEQLKEELRKK 660
Query: 661 QEMLDMKRNDFRRQLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIA 720
QE+LD KRNDFRRQLDKLEKQA G K + V +AKRLKVGI AD +K T ++SDS A
Sbjct: 661 QELLDQKRNDFRRQLDKLEKQA-GGKSDVVSEKAAKRLKVGIAADVAK-ATARSSDSTAA 720
Query: 721 LASPHTEASGEH------VECPCPEPTTSIVQQESSKF-EPVHPLS-SETPFDVDGDKSG 780
+ASPH E + V P + T++V QES+ F + + PL+ + PF ++ K
Sbjct: 721 VASPHAEMMADKNKLVDIVLSPSQKVNTAMVLQESTSFKQQIRPLAPAGPPFLMNRYKLD 780
Query: 781 SCSTGFRVVPPLPVDFANEDVIKKHFSSLGDVCTVELVS---EDGDRISNASNNCSANVT 840
+ T FR++PPLPV FA+ V+K+HFSS GD+ +VEL +GD S+AS NC +V+
Sbjct: 781 NRPTAFRIIPPLPVGFADVAVLKEHFSSYGDLASVELEDGEVHEGDNGSDASKNCQVHVS 840
Query: 841 FLTRHSAERAFKDGKSWQGQDLKLIWLSGSEGEDHDGALSDDA-----SRDADMEPESEP 890
F TR SAERAF GKSWQG DL+ WL S + G + S D D++ E +
Sbjct: 841 FTTRRSAERAFLSGKSWQGHDLQFTWLMPSSSSNDLGNKEKTSTFLKGSSDTDVQKEEKL 900
BLAST of Cp4.1LG03g07390 vs. TrEMBL
Match:
M5X9S1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001047mg PE=4 SV=1)
HSP 1 Score: 853.6 bits (2204), Expect = 2.2e-244
Identity = 501/897 (55.85%), Postives = 613/897 (68.34%), Query Frame = 1
Query: 1 MELKVSYPKLG-ISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVL-R 60
MELKVS PK G +S S+ +SDPEEK++SDD+DDDRNHKHRRRETRSQSLERDT + V+ R
Sbjct: 1 MELKVSSPKPGGLSPSDCISDPEEKEVSDDDDDDRNHKHRRRETRSQSLERDTLDQVIAR 60
Query: 61 PYGKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFN 120
PY KR+KP NG S RDNDSQA+ W+++N+ + +D KFDKRR G R D N
Sbjct: 61 PYRKRNKPFANGNSFRDNDSQASTTWRNYNSAS--QDFSVKFDKRRPGLASLPRAPFDLN 120
Query: 121 QRIRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPS 180
QRIRANQ F GD GRGRGR+SG+W Q DSRF+ DIASQ+V +G PP+LFAGRGLPS
Sbjct: 121 QRIRANQGFPGDPGLGRGRGRDSGSWGQRDSRFNS-DIASQMVQQGSIPPNLFAGRGLPS 180
Query: 181 VSTAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGF 240
VS+AQ A WNAFGL+PGIPN ++T+H IGLQGTLRPPI+ +N+GIPRQRCRDFEERGF
Sbjct: 181 VSSAQNASWNAFGLIPGIPNGAMDTLHSIGLQGTLRPPIHSSMNMGIPRQRCRDFEERGF 240
Query: 241 CLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTT--GSLPAVSTTSTTVMS 300
CLRGDMCPMEHG+NRIVVEDVQSLSQFNLP+S +AHL+GK T GSLP+VS +S +M+
Sbjct: 241 CLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVS--SAHLLGKPTGPGSLPSVSASSAALMN 300
Query: 301 GKGLLGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSS 360
KGL GK SK V DD L +G YSG G ADLYDPDQPLWNNN PE NAL G+ S
Sbjct: 301 SKGLHGKTSKSAVNDDGLGLNGPYSGPGYLGGADLYDPDQPLWNNNGPETSNALLGLQSP 360
Query: 361 KIDDVESLMGDDPSDRNQVRKCDAADNGCSSRITAT-SGSQGTSSSVWGRVG-SRNRQDV 420
+ D+ ESL+ D+ADN C R T + SQ TS SVWGR+G S+++ DV
Sbjct: 361 RNDETESLL-------------DSADNECPIRSVGTAANSQSTSVSVWGRIGSSKSKLDV 420
Query: 421 KGKLDPV-NSSGCLDNEVKEHNEVLTSVQGNSHQQKHMAQGDAHTEAGNLPHKALNDANA 480
K K+DP NSS C+++E KE E L S+Q Q K + D + P +
Sbjct: 421 KEKIDPTNNSSDCIESETKEGKEALVSIQNPPRQGKRIMAEDGPKAVDSSPKTHFDPT-- 480
Query: 481 MRTMRKPSQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKRE 540
R +RKPSQKALRTLFVNGIP +SNK E LLSHF+K+GEVIDIYIP NS+RAFVQFS+RE
Sbjct: 481 -RNIRKPSQKALRTLFVNGIPQKSNKREALLSHFQKFGEVIDIYIPLNSERAFVQFSRRE 540
Query: 541 EAEAALKSPDAVMGNRFIKLWWANRDSIPDAGVG-SNNGIHVPPRHIAAVSLLPLVVKGK 600
EAEAALK+PDAVMGNRFI+LWWANRDSIPD G G ++N + P H S+ K
Sbjct: 541 EAEAALKAPDAVMGNRFIRLWWANRDSIPDDGTGTASNFPGLIPPHPTVTSI------SK 600
Query: 601 NSVQVSTSKGSVSHPLESSLAAPDHSH-AFSSPKVSSPLQKKLENLEQLKEELRKKQEML 660
+++Q + K S+ H ++ L + D+S S+ + PLQKKLENLEQLKEELRKKQEML
Sbjct: 601 DNLQSAAPKSSIVHTSDAFLPSADNSKPVISNGPKAPPLQKKLENLEQLKEELRKKQEML 660
Query: 661 DMKRNDFRRQLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIALASP 720
D KRNDFRR+LDKLEKQATG KGE + +AKR KVGI AD K+ PK+S+ +
Sbjct: 661 DQKRNDFRRKLDKLEKQATGPKGEADIEQAAKRPKVGITADVGKVANPKSSNP-TPMEEL 720
Query: 721 HTEASGEH------VECPCPEPTTSIVQQESS-KFEPVHPLSS-ETPFDVDGDKSGSCST 780
H E + ++ V C TT ++QQ +S K + PL S TP V+ K + T
Sbjct: 721 HAEMTDKNKCVENVVSCSPKTSTTMVLQQSTSLKQLSIRPLGSIGTPSPVNRYKLDNRPT 780
Query: 781 GFRVVPPLPVDFANEDVIKKHFSSLGDVCTVE---LVSEDGDRISNASNNCSANVTFLTR 840
FR++PPLP FAN ++K+HFS GD+ E L S D AS +CSA +TF TR
Sbjct: 781 AFRILPPLPAGFANVAIMKEHFSPYGDLSNAELEDLESRDCGSELEASKDCSACITFTTR 840
Query: 841 HSAERAFKDGKSWQGQDLKLIWLSGS-EGEDHDGALSDDASRD------ADMEPESE 871
SAERAF +GK W+G DLK +WL+ S D G + ++ AD+EP E
Sbjct: 841 RSAERAFLNGKCWEGHDLKFMWLTSSISSNDRSGRENSPSTTTPKGPLIADVEPADE 869
BLAST of Cp4.1LG03g07390 vs. TAIR10
Match:
AT3G27700.1 (AT3G27700.1 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein)
HSP 1 Score: 588.6 bits (1516), Expect = 6.6e-168
Identity = 389/877 (44.36%), Postives = 531/877 (60.55%), Query Frame = 1
Query: 1 MELKVSYPKLGI-SSSEYVSDPEEK-DISDDEDDDRNHKHRRR-ETRSQSLERDTREHVL 60
MEL VS PK + S + +SDPEE+ +IS++EDDDRNHKHRR+ ETRSQSLE+D+ +
Sbjct: 1 MELSVSSPKQSVLSPPDCMSDPEEEHEISEEEDDDRNHKHRRKEETRSQSLEQDSSDQAF 60
Query: 61 -RPYGKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGD 120
RPY K + ENG S ++ +KR G G R+ D
Sbjct: 61 SRPYRKNYRHYENGNSFSEH------------------------EKRSFGTGSGQRVQFD 120
Query: 121 FNQRIRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGL 180
NQR+R+N FS D GRGRG G+W Q DSRF+PVD++S +V G +F GRGL
Sbjct: 121 -NQRMRSNPMFSRDSGPGRGRG-NYGSWAQRDSRFNPVDLSSHMVQVGSMGQGMFGGRGL 180
Query: 181 PSVSTAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEER 240
VS AQ+APW FG++PG+PN GL+ H LQG+LRPP+N PLN+GIPRQRCRDFEER
Sbjct: 181 AGVSAAQSAPWPPFGMIPGVPNGGLDGFH--HLQGSLRPPLNAPLNMGIPRQRCRDFEER 240
Query: 241 GFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTSTTVMS 300
GFCLRGDMCPMEHG+NRIVV+DVQSLSQFNLP+S+P A + ++ +PA + M+
Sbjct: 241 GFCLRGDMCPMEHGMNRIVVDDVQSLSQFNLPVSVPGAPHLAASSKQVPA-QFGGASFMN 300
Query: 301 GKGLLGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSS 360
KG G+ ++ G+ D L + Y +G D YDPDQPLWNN+ E A+S ++S
Sbjct: 301 PKGAHGRTNEGGMAVDGLGYGDAYPSAGG---TDFYDPDQPLWNNSTGETSGAISTLNSH 360
Query: 361 KIDDVESLMGDDPSDRNQVRKCDAADNGCSSRITATSGSQGTSSSVWGRV-GSRNRQDVK 420
+D+ + + D NQ DAA+NGC R S+ TS SVWGR+ GS ++ + K
Sbjct: 361 GVDENVAPL----DDSNQ----DAAENGCGIR-----DSRSTSQSVWGRMKGSNSQANSK 420
Query: 421 GKLDPV-NSSGCLDNEVKEHNEVLTSVQGNSH-QQKHMAQGDAH-TEAGNLPHKALNDAN 480
K D V NSS ++++KE SV + H +Q H+ + A ++ N+ + +N+
Sbjct: 421 EKADAVLNSSAVPEDQLKE-----VSVNSSRHGKQNHVGESVAKVVDSSNISNDMMNNT- 480
Query: 481 AMRTMRKPSQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKR 540
RKP+QKA+RTLFVN +P +SN+ + +L+HF+K+G+VIDI+IP NS+RAFVQFSKR
Sbjct: 481 -----RKPTQKAMRTLFVNYVPHESNRRDLILAHFQKFGKVIDIHIPVNSERAFVQFSKR 540
Query: 541 EEAEAALKSPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHI---AAVSLLPLVV 600
EEAE+AL++PDAVMGNRFIKLWWANRDSIPD G+ + +G + R + A + P+
Sbjct: 541 EEAESALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGSGASMKGRSMTASGAQNQFPIAA 600
Query: 601 KGKNSVQVSTSKGSVSHPLESSLAAPDHSH-------AFSSPKVSSPLQKKLENLEQLKE 660
K++ S +K P + AP S S PKV+ QKK + LE+LKE
Sbjct: 601 ASKSNHVSSIAK----VPTFQTGGAPSSSEQPKPVVVTTSGPKVTPLQQKKADTLERLKE 660
Query: 661 ELRKKQEMLDMKRNDFRRQLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKAS 720
LRKKQEML+ KRN++R++L LEKQ T K E AKR+K+ AS
Sbjct: 661 TLRKKQEMLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKL-----------DTAS 720
Query: 721 DSGIALASPHTEASGEHVECPCPEP------TTSIVQQESSKFEPVHPLSSETPFD---V 780
DSG A+ASP TE+S + + P +P +T +S F+ P S T + V
Sbjct: 721 DSGAAIASPKTESSTDK-KVPILKPLSTAKLSTETPSPDSKNFKQ-RPYSFTTSLNAPMV 780
Query: 781 DGDKSGSCSTGFRVVPPLPVDFANEDVIKKHFSSLGDVCTVELVSEDGDRISNASNNCSA 840
+ K + +T +VVPPLP A+ V+K+HFSS G+V VEL ED I + ++ +
Sbjct: 781 NRYKLDNRTTTIKVVPPLPTGLADVAVVKEHFSSYGEVSKVEL--EDNASIDSGKDHETQ 802
Query: 841 N------VTFLTRHSAERAFKDGKSWQGQDLKLIWLS 845
N VTF+ R +AE+AF + K WQ L+L+W++
Sbjct: 841 NESRAACVTFVKRSAAEKAFANAKCWQEHTLQLVWVT 802
BLAST of Cp4.1LG03g07390 vs. NCBI nr
Match:
gi|659085700|ref|XP_008443556.1| (PREDICTED: zinc finger CCCH domain-containing protein 41 isoform X1 [Cucumis melo])
HSP 1 Score: 1505.3 bits (3896), Expect = 0.0e+00
Identity = 775/890 (87.08%), Postives = 809/890 (90.90%), Query Frame = 1
Query: 1 MELKVSYPKLGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
MELKVSYPK GISSS+YVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY
Sbjct: 1 MELKVSYPKPGISSSDYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
Query: 61 GKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFNQR 120
GKR+KP ENGRS RDNDSQANEAWKSFN PTLEKD PGKFDKRRLG VPG R+ GDFNQR
Sbjct: 61 GKRNKPFENGRSFRDNDSQANEAWKSFNAPTLEKDTPGKFDKRRLGGVPGPRVVGDFNQR 120
Query: 121 IRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPSVS 180
IR NQ FSGDLSSGRGRGR+SG WNQFDSRFSPVDIASQIVH G FPPSLFAGRGLPSVS
Sbjct: 121 IRGNQGFSGDLSSGRGRGRDSGAWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPSVS 180
Query: 181 TAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
TAQTAPWNAFGL+PGIP SGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLIPGIPTSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTSTTVMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHL+GKTTGSLPAVST+STTVMSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLIGKTTGSLPAVSTSSTTVMSGKGL 300
Query: 301 LGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDD 360
LGKN KP VGDDSLPFHGVYSGSGSA EADLYDPDQPLWNN+CPEKPNALSGMHSSKID+
Sbjct: 301 LGKNIKPSVGDDSLPFHGVYSGSGSAAEADLYDPDQPLWNNSCPEKPNALSGMHSSKIDE 360
Query: 361 VESLMGDDPSDRNQVRKCDAADNGCSSRITATSGSQGTSSSVWGRVGSRNRQDVKGKLDP 420
VES MGDDPSDRNQVRKCDA DNGC+SRITA SGSQ TSSSVWGRVGSRNRQDVKGKLDP
Sbjct: 361 VESFMGDDPSDRNQVRKCDAGDNGCTSRITAPSGSQVTSSSVWGRVGSRNRQDVKGKLDP 420
Query: 421 VNSSGCLDNEVKEHNEVLTSVQGNSHQQKHMAQGDAHTEAGNLPHKALNDANAMRTMRKP 480
VN+SGCLDNEVKE N VL SVQGNSHQQKHMAQ D H +AG+L KA +DAN MRTMRKP
Sbjct: 421 VNASGCLDNEVKEQNVVLASVQGNSHQQKHMAQDDPHNKAGDLSLKAQSDANTMRTMRKP 480
Query: 481 SQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALK 540
SQKA TLFVNGIPLQSNKTETLLSHF KYGEVIDIYIPAN+QRAFVQFSKREEAEAALK
Sbjct: 481 SQKATCTLFVNGIPLQSNKTETLLSHFNKYGEVIDIYIPANTQRAFVQFSKREEAEAALK 540
Query: 541 SPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHIAAVSLLPLVVKGKNSVQVSTS 600
SPDAVMGNRFIKLWWANRDSIPD GV SNNGIHVPPRHIAA SL + VKGKNSV VSTS
Sbjct: 541 SPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVPPRHIAAASLPSIAVKGKNSVPVSTS 600
Query: 601 KGSVSHPLESSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRNDFRR 660
KGS+SHPL+SSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQ+MLDMKRNDFRR
Sbjct: 601 KGSISHPLDSSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQQMLDMKRNDFRR 660
Query: 661 QLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIALASPHTEASGEHV 720
QLDKLEKQATGNK E V G SAKRLKVGIEAD SKL PKASDS +ALASPHTE +GEH
Sbjct: 661 QLDKLEKQATGNKAEAVTGSSAKRLKVGIEADTSKL-GPKASDSSVALASPHTEVNGEH- 720
Query: 721 ECPCPEPTTSIVQQESSKFEPVHPLSSETPFDVDGDKSGSCSTGFRVVPPLPVDFANEDV 780
PEPTTSIVQQESSKFEPV L++E PFD +G+K GSCSTGF++VPPLP DFANEDV
Sbjct: 721 ----PEPTTSIVQQESSKFEPVDSLTTEAPFDNEGEKLGSCSTGFKIVPPLPADFANEDV 780
Query: 781 IKKHFSSLGDVCTVELVSEDGDRISNASNNCSANVTFLTRHSAERAFKDGKSWQGQDLKL 840
IK+HFS+LGDVCTVELVSEDG RISNASNNCSANVTFLTRHSAERAF DG+SWQGQDLK
Sbjct: 781 IKQHFSALGDVCTVELVSEDGVRISNASNNCSANVTFLTRHSAERAFVDGRSWQGQDLKF 840
Query: 841 IWLSGSEGEDHDGALSDDASRDADMEPESEPESILLKEETPYHTESQNST 891
IWLS S+ + H S D SRDADMEPE+E E I L ETP H ESQ+ T
Sbjct: 841 IWLS-SDKDPH--RTSSDTSRDADMEPENEAEIISL-NETPCHKESQSPT 880
BLAST of Cp4.1LG03g07390 vs. NCBI nr
Match:
gi|449446871|ref|XP_004141194.1| (PREDICTED: zinc finger CCCH domain-containing protein 41 [Cucumis sativus])
HSP 1 Score: 1504.6 bits (3894), Expect = 0.0e+00
Identity = 773/890 (86.85%), Postives = 807/890 (90.67%), Query Frame = 1
Query: 1 MELKVSYPKLGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
MELKVSYPK GISS +YVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERD REHVLRPY
Sbjct: 1 MELKVSYPKPGISS-DYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDAREHVLRPY 60
Query: 61 GKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFNQR 120
GKRSKP ENGRS RDNDSQANEAWKSFN PTLEKD PGKFDKRRLGAVPG R+ GDFNQR
Sbjct: 61 GKRSKPFENGRSFRDNDSQANEAWKSFNAPTLEKDTPGKFDKRRLGAVPGPRVVGDFNQR 120
Query: 121 IRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPSVS 180
IR NQ FSGDLSSGRGRGR+SGTWNQFDSRFSPVDIASQIVH G FPPSLFAGRGLPSVS
Sbjct: 121 IRGNQAFSGDLSSGRGRGRDSGTWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPSVS 180
Query: 181 TAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
TAQTAPWNAFGL+ GIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLISGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTSTTVMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHL+GKTTGSLPAVST+STTVMSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLIGKTTGSLPAVSTSSTTVMSGKGL 300
Query: 301 LGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDD 360
LGKN KP VGDDS+PFHGVYSGSGSA EADLYDPDQPLWNNNCPEKPNALSGMHSSKID+
Sbjct: 301 LGKNIKPSVGDDSMPFHGVYSGSGSAGEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDE 360
Query: 361 VESLMGDDPSDRNQVRKCDAADNGCSSRITATSGSQGTSSSVWGRVGSRNRQDVKGKLDP 420
VES +GDDPSDRNQVRKCDA DNGC+SRITA SGS TSSSVWGRVGSRNRQDVKGKLDP
Sbjct: 361 VESFIGDDPSDRNQVRKCDAGDNGCTSRITAPSGSHVTSSSVWGRVGSRNRQDVKGKLDP 420
Query: 421 VNSSGCLDNEVKEHNEVLTSVQGNSHQQKHMAQGDAHTEAGNLPHKALNDANAMRTMRKP 480
VN+SGCLDNEVKE N VL SVQGNSHQQKHMAQ DAHT+AG+L KA +DAN MRTMRKP
Sbjct: 421 VNASGCLDNEVKEQNVVLASVQGNSHQQKHMAQDDAHTKAGDLSLKAQSDANTMRTMRKP 480
Query: 481 SQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALK 540
SQKA TLFVNGIPLQSNKTETLLSHF KYGEVIDIYIPANSQRAFVQFSKREEAEAALK
Sbjct: 481 SQKATCTLFVNGIPLQSNKTETLLSHFNKYGEVIDIYIPANSQRAFVQFSKREEAEAALK 540
Query: 541 SPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHIAAVSLLPLVVKGKNSVQVSTS 600
SPDAVMGNRFIKLWWANRDSIPD GV SNNGIHVPPRHIAA SL L VKGKNSV VSTS
Sbjct: 541 SPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVPPRHIAAASLPSLAVKGKNSVPVSTS 600
Query: 601 KGSVSHPLESSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRNDFRR 660
KGS+SHPLESSLA PDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQ+MLDMKRNDFRR
Sbjct: 601 KGSISHPLESSLAGPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQQMLDMKRNDFRR 660
Query: 661 QLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIALASPHTEASGEHV 720
QLDKLEKQATGNK E V G SAKRLKVGIEAD SKLV PKASDS +AL+SPHTE +GEH
Sbjct: 661 QLDKLEKQATGNKVEAVTGSSAKRLKVGIEADTSKLV-PKASDSSVALSSPHTEVNGEH- 720
Query: 721 ECPCPEPTTSIVQQESSKFEPVHPLSSETPFDVDGDKSGSCSTGFRVVPPLPVDFANEDV 780
PEPTTSIVQQESSKFEPV P+++E PFD DG+K GSCSTGF++VPPLPVDFANEDV
Sbjct: 721 ----PEPTTSIVQQESSKFEPVDPMTTEEPFDNDGEKLGSCSTGFKIVPPLPVDFANEDV 780
Query: 781 IKKHFSSLGDVCTVELVSEDGDRISNASNNCSANVTFLTRHSAERAFKDGKSWQGQDLKL 840
IK+HFSSLGDVC+VE VSEDG +ISNASNNCSANVTFLTRHSAERAF+DG+SWQGQDLK
Sbjct: 781 IKQHFSSLGDVCSVEFVSEDGVQISNASNNCSANVTFLTRHSAERAFEDGRSWQGQDLKF 840
Query: 841 IWLSGSEGEDHDGALSDDASRDADMEPESEPESILLKEETPYHTESQNST 891
IWLS + H S D SRDADMEPE+E + ET H ESQ+ T
Sbjct: 841 IWLSNDKDPHH---TSSDTSRDADMEPENEEAETISLNETLSHKESQSPT 880
BLAST of Cp4.1LG03g07390 vs. NCBI nr
Match:
gi|700204563|gb|KGN59696.1| (hypothetical protein Csa_3G838750 [Cucumis sativus])
HSP 1 Score: 1357.8 bits (3513), Expect = 0.0e+00
Identity = 694/777 (89.32%), Postives = 719/777 (92.54%), Query Frame = 1
Query: 1 MELKVSYPKLGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
MELKVSYPK GISS +YVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERD REHVLRPY
Sbjct: 1 MELKVSYPKPGISS-DYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDAREHVLRPY 60
Query: 61 GKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFNQR 120
GKRSKP ENGRS RDNDSQANEAWKSFN PTLEKD PGKFDKRRLGAVPG R+ GDFNQR
Sbjct: 61 GKRSKPFENGRSFRDNDSQANEAWKSFNAPTLEKDTPGKFDKRRLGAVPGPRVVGDFNQR 120
Query: 121 IRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPSVS 180
IR NQ FSGDLSSGRGRGR+SGTWNQFDSRFSPVDIASQIVH G FPPSLFAGRGLPSVS
Sbjct: 121 IRGNQAFSGDLSSGRGRGRDSGTWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPSVS 180
Query: 181 TAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
TAQTAPWNAFGL+ GIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLISGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTSTTVMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHL+GKTTGSLPAVST+STTVMSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLIGKTTGSLPAVSTSSTTVMSGKGL 300
Query: 301 LGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDD 360
LGKN KP VGDDS+PFHGVYSGSGSA EADLYDPDQPLWNNNCPEKPNALSGMHSSKID+
Sbjct: 301 LGKNIKPSVGDDSMPFHGVYSGSGSAGEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDE 360
Query: 361 VESLMGDDPSDRNQVRKCDAADNGCSSRITATSGSQGTSSSVWGRVGSRNRQDVKGKLDP 420
VES +GDDPSDRNQVRKCDA DNGC+SRITA SGS TSSSVWGRVGSRNRQDVKGKLDP
Sbjct: 361 VESFIGDDPSDRNQVRKCDAGDNGCTSRITAPSGSHVTSSSVWGRVGSRNRQDVKGKLDP 420
Query: 421 VNSSGCLDNEVKEHNEVLTSVQGNSHQQKHMAQGDAHTEAGNLPHKALNDANAMRTMRKP 480
VN+SGCLDNEVKE N VL SVQGNSHQQKHMAQ DAHT+AG+L KA +DAN MRTMRKP
Sbjct: 421 VNASGCLDNEVKEQNVVLASVQGNSHQQKHMAQDDAHTKAGDLSLKAQSDANTMRTMRKP 480
Query: 481 SQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALK 540
SQKA TLFVNGIPLQSNKTETLLSHF KYGEVIDIYIPANSQRAFVQFSKREEAEAALK
Sbjct: 481 SQKATCTLFVNGIPLQSNKTETLLSHFNKYGEVIDIYIPANSQRAFVQFSKREEAEAALK 540
Query: 541 SPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHIAAVSLLPLVVKGKNSVQVSTS 600
SPDAVMGNRFIKLWWANRDSIPD GV SNNGIHVPPRHIAA SL L VKGKNSV VSTS
Sbjct: 541 SPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVPPRHIAAASLPSLAVKGKNSVPVSTS 600
Query: 601 KGSVSHPLESSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRNDFRR 660
KGS+SHPLESSLA PDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQ+MLDMKRNDFRR
Sbjct: 601 KGSISHPLESSLAGPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQQMLDMKRNDFRR 660
Query: 661 QLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIALASPHTEASGEHV 720
QLDKLEKQATGNK E V G SAKRLKVGIEAD SKLV PKASDS +AL+SPHTE +GEH
Sbjct: 661 QLDKLEKQATGNKVEAVTGSSAKRLKVGIEADTSKLV-PKASDSSVALSSPHTEVNGEH- 720
Query: 721 ECPCPEPTTSIVQQESSKFEPVHPLSSETPFDVDGDKSGSCSTGFRVVPPLPVDFAN 778
PEPTTSIVQQESSKFEPV P+++E PFD DG+K GSCSTGF++VPPLPVDFAN
Sbjct: 721 ----PEPTTSIVQQESSKFEPVDPMTTEEPFDNDGEKLGSCSTGFKIVPPLPVDFAN 770
BLAST of Cp4.1LG03g07390 vs. NCBI nr
Match:
gi|659085704|ref|XP_008443558.1| (PREDICTED: zinc finger CCCH domain-containing protein 41 isoform X2 [Cucumis melo])
HSP 1 Score: 1354.0 bits (3503), Expect = 0.0e+00
Identity = 689/777 (88.67%), Postives = 716/777 (92.15%), Query Frame = 1
Query: 1 MELKVSYPKLGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
MELKVSYPK GISSS+YVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY
Sbjct: 1 MELKVSYPKPGISSSDYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60
Query: 61 GKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFNQR 120
GKR+KP ENGRS RDNDSQANEAWKSFN PTLEKD PGKFDKRRLG VPG R+ GDFNQR
Sbjct: 61 GKRNKPFENGRSFRDNDSQANEAWKSFNAPTLEKDTPGKFDKRRLGGVPGPRVVGDFNQR 120
Query: 121 IRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPSVS 180
IR NQ FSGDLSSGRGRGR+SG WNQFDSRFSPVDIASQIVH G FPPSLFAGRGLPSVS
Sbjct: 121 IRGNQGFSGDLSSGRGRGRDSGAWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPSVS 180
Query: 181 TAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
TAQTAPWNAFGL+PGIP SGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLIPGIPTSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240
Query: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTTSTTVMSGKGL 300
RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHL+GKTTGSLPAVST+STTVMSGKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLIGKTTGSLPAVSTSSTTVMSGKGL 300
Query: 301 LGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDD 360
LGKN KP VGDDSLPFHGVYSGSGSA EADLYDPDQPLWNN+CPEKPNALSGMHSSKID+
Sbjct: 301 LGKNIKPSVGDDSLPFHGVYSGSGSAAEADLYDPDQPLWNNSCPEKPNALSGMHSSKIDE 360
Query: 361 VESLMGDDPSDRNQVRKCDAADNGCSSRITATSGSQGTSSSVWGRVGSRNRQDVKGKLDP 420
VES MGDDPSDRNQVRKCDA DNGC+SRITA SGSQ TSSSVWGRVGSRNRQDVKGKLDP
Sbjct: 361 VESFMGDDPSDRNQVRKCDAGDNGCTSRITAPSGSQVTSSSVWGRVGSRNRQDVKGKLDP 420
Query: 421 VNSSGCLDNEVKEHNEVLTSVQGNSHQQKHMAQGDAHTEAGNLPHKALNDANAMRTMRKP 480
VN+SGCLDNEVKE N VL SVQGNSHQQKHMAQ D H +AG+L KA +DAN MRTMRKP
Sbjct: 421 VNASGCLDNEVKEQNVVLASVQGNSHQQKHMAQDDPHNKAGDLSLKAQSDANTMRTMRKP 480
Query: 481 SQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALK 540
SQKA TLFVNGIPLQSNKTETLLSHF KYGEVIDIYIPAN+QRAFVQFSKREEAEAALK
Sbjct: 481 SQKATCTLFVNGIPLQSNKTETLLSHFNKYGEVIDIYIPANTQRAFVQFSKREEAEAALK 540
Query: 541 SPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHIAAVSLLPLVVKGKNSVQVSTS 600
SPDAVMGNRFIKLWWANRDSIPD GV SNNGIHVPPRHIAA SL + VKGKNSV VSTS
Sbjct: 541 SPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVPPRHIAAASLPSIAVKGKNSVPVSTS 600
Query: 601 KGSVSHPLESSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRNDFRR 660
KGS+SHPL+SSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQ+MLDMKRNDFRR
Sbjct: 601 KGSISHPLDSSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQQMLDMKRNDFRR 660
Query: 661 QLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIALASPHTEASGEHV 720
QLDKLEKQATGNK E V G SAKRLKVGIEAD SKL PKASDS +ALASPHTE +GEH
Sbjct: 661 QLDKLEKQATGNKAEAVTGSSAKRLKVGIEADTSKL-GPKASDSSVALASPHTEVNGEH- 720
Query: 721 ECPCPEPTTSIVQQESSKFEPVHPLSSETPFDVDGDKSGSCSTGFRVVPPLPVDFAN 778
PEPTTSIVQQESSKFEPV L++E PFD +G+K GSCSTGF++VPPLP DFAN
Sbjct: 721 ----PEPTTSIVQQESSKFEPVDSLTTEAPFDNEGEKLGSCSTGFKIVPPLPADFAN 771
BLAST of Cp4.1LG03g07390 vs. NCBI nr
Match:
gi|359488670|ref|XP_002273438.2| (PREDICTED: zinc finger CCCH domain-containing protein 41 [Vitis vinifera])
HSP 1 Score: 880.9 bits (2275), Expect = 1.8e-252
Identity = 507/923 (54.93%), Postives = 636/923 (68.91%), Query Frame = 1
Query: 1 MELKVSYPK-LGISSSEYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVL-R 60
MELKVS PK G+S S+ SDPEEK+ISD++DDDRNHKHRRRETRSQSLERD+ E VL R
Sbjct: 1 MELKVSSPKPSGLSPSDGESDPEEKEISDEDDDDRNHKHRRRETRSQSLERDSLEQVLSR 60
Query: 61 PYGKRSKPSENGRSIRDNDSQANEAWKSFNTPTLEKDIPGKFDKRRLGAVPGARLAGDFN 120
PY KR+KP ENG S R+NDSQ++ +WK++N +EKD GKF+KRR G AR D N
Sbjct: 61 PYRKRNKPFENGHSFRENDSQSSGSWKNYNISPMEKDFSGKFEKRRPGLATFARAPLDLN 120
Query: 121 QRIRANQTFSGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHRGPFPPSLFAGRGLPS 180
QR R NQ+FSGD RGRGR+ G+WNQ D RFS VDIASQ+V +G PP L+AGRGLP+
Sbjct: 121 QRTRMNQSFSGDSGPVRGRGRDPGSWNQRDPRFSQVDIASQMV-QGSIPPGLYAGRGLPN 180
Query: 181 VSTAQTAPWNAFGLLPGIPNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGF 240
VS Q A W+ FGLLPGIPN L+++H +GLQGTLRPP++ LN IPRQRCRDFEERGF
Sbjct: 181 VSNTQNASWSGFGLLPGIPNGALDSLHSLGLQGTLRPPLSTSLNKSIPRQRCRDFEERGF 240
Query: 241 CLRGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTT--GSLPAVSTTSTTVMS 300
CLRGDMCPMEHG+NRIVVEDVQSLSQFNLP+SLP+AHL+G G LP+V+ +T+M+
Sbjct: 241 CLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLPSAHLLGTPAGPGPLPSVNAPPSTLMN 300
Query: 301 GKGLLGKNSKPGVGDDSLPFHGVYSGSGSATEADLYDPDQPLWNNNCPEKPNALSGMHSS 360
KG K+ KP V +D L +G +SGS A+LYDPDQPLWNN+CPE P+AL +HS
Sbjct: 301 SKGFQNKSGKPEVAEDELGLNGAFSGSAVGGGAELYDPDQPLWNNDCPETPSALLALHSP 360
Query: 361 KIDDVESLMGDDPSDRNQVRKCDAADNGCSSRITATS-GSQGTSSSVWGRV-GSRNRQDV 420
KID+ E L+ + SDR R CD +DNG + T T+ GSQ T+ SVWGR+ G+++R +
Sbjct: 361 KIDETECLLDANSSDRYHARLCDGSDNGRPVKNTGTTVGSQSTNVSVWGRIGGAKDRLEA 420
Query: 421 KGKLDPV-NSSGCLDNEVKEHNEVLTSVQGNSHQQKHMAQGDAHTEAGNLPHKALNDANA 480
K K+D V +SS L+NE KE E LTSVQG S Q K + D ++ +L + +D A
Sbjct: 421 KEKIDSVISSSDYLENEGKEDQEALTSVQGTSRQGKRIIVEDIGSKNVDLSSRTQSD--A 480
Query: 481 MRTMRKPSQKALRTLFVNGIPLQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKRE 540
MR +RKPSQKALRTLFVNGIP ++N+ E LLSHF+K+GEVIDIYIP NS+RAFVQFSKRE
Sbjct: 481 MRNIRKPSQKALRTLFVNGIPQKNNRKEALLSHFRKFGEVIDIYIPLNSERAFVQFSKRE 540
Query: 541 EAEAALKSPDAVMGNRFIKLWWANRDSIPDAGVGSNNGIHVPPRHIAAVSL---LPLVVK 600
EAEAAL++PDAVMGNRFIKLWWANRDS+PD + NG V P + A S+ V +
Sbjct: 541 EAEAALQAPDAVMGNRFIKLWWANRDSVPDDSISGGNGASVIPHGVTAASVPSHPSAVNR 600
Query: 601 GKNSVQVSTSKGSVSHPLESSLAAPDHSHAF--SSPKVSSPLQKKLENLEQLKEELRKKQ 660
K+++Q + K + H +++ DHS + PK PLQKKLE+LE +KEELRKKQ
Sbjct: 601 AKDNLQSAAPKVNAVHAIDAPSPTSDHSKPIVTNGPKAPPPLQKKLESLELMKEELRKKQ 660
Query: 661 EMLDMKRNDFRRQLDKLEKQATGNKGETVVGFSAKRLKVGIEADASKLVTPKASDSGIAL 720
EMLD KRNDFRRQLDKLEKQATG KGE +AKR KVGI DA+K TP+ +D GIA+
Sbjct: 661 EMLDQKRNDFRRQLDKLEKQATGLKGEVGAEQAAKRPKVGIVGDAAKAATPRCTDPGIAV 720
Query: 721 ASPHTE------ASGEHVECPCPEPTTSIVQQESSKF-EPVHPLS-SETPFDVDGDKSGS 780
SP TE S E+V + +++V E + + V PL+ TP ++ K +
Sbjct: 721 GSPQTEITMDKNKSAENVVPYSSKTNSAMVLLEPTVLKQSVRPLALGGTPSQMNRYKLDN 780
Query: 781 CSTGFRVVPPLPVDFANEDVIKKHFSSLGDVCTVE---LVSEDGDRISNASNNCSANVTF 840
GFR++ PLP AN V+K+HFSS GD+ TVE L + DG S+AS NCSA + F
Sbjct: 781 RPMGFRIMAPLPTGLANVGVLKEHFSSYGDLSTVELEDLEALDGGNGSDASRNCSARIIF 840
Query: 841 LTRHSAERAFKDGKSWQGQDLKLIWL----SGSE-GEDHDGALSDDASRDADMEPESEP- 890
TR SAERAF +GK WQG +L +WL SG+E G + S DAD++P +
Sbjct: 841 TTRRSAERAFVNGKCWQGHNLHFMWLISSNSGNELGGRESSPSASKGSSDADLQPAGKVA 900
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| C3H41_ARATH | 1.2e-166 | 44.36 | Zinc finger CCCH domain-containing protein 41 OS=Arabidopsis thaliana GN=At3g277... | [more] |
| C3H27_ORYSJ | 3.0e-138 | 39.95 | Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica GN... | [more] |
| RBM26_MOUSE | 1.5e-09 | 51.79 | RNA-binding protein 26 OS=Mus musculus GN=Rbm26 PE=1 SV=2 | [more] |
| RBM26_HUMAN | 1.5e-09 | 51.79 | RNA-binding protein 26 OS=Homo sapiens GN=RBM26 PE=1 SV=3 | [more] |
| RBM26_XENLA | 2.9e-08 | 56.52 | RNA-binding protein 26 OS=Xenopus laevis GN=rbm26 PE=2 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LI12_CUCSA | 0.0e+00 | 89.32 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G838750 PE=4 SV=1 | [more] |
| F6HUX2_VITVI | 1.3e-252 | 54.93 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g00790 PE=4 SV=... | [more] |
| A0A061ECV5_THECC | 3.2e-248 | 55.70 | Zinc finger family protein / RNA recognition motif-containing protein, putative ... | [more] |
| V4U1P8_9ROSI | 3.9e-246 | 54.73 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014173mg PE=4 SV=1 | [more] |
| M5X9S1_PRUPE | 2.2e-244 | 55.85 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001047mg PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G27700.1 | 6.6e-168 | 44.36 | zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)... | [more] |
