Cp4.1LG03g07120 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g07120
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPhosphoribosylformimino-5-aminoimidazole carboxamide ribotideisomerase
LocationCp4.1LG03 : 3629853 .. 3634356 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGTTAAGAGGCCGTGGTTCGAACCCAATGCACAGCAGTTAGGCGCGAAACTCGAACCAAAATCAGTCGGCCAAACGAATCAGAGAGACGATGTTAACTCTGCATANTTACAGAATAATGTTGAGAAAAGTTAAGAGGCCGTGGTTCGATCCCAATCCACAGCAGTTAGGCGCGAAACTCGAACCAAAATCAGTCGGCCAGACGAATGAGAGAGACGATGTTAGCTTTGCAAAGGGCTTTCCGGACGATCCATACCACCGTTGATGCTCCGCAAATTACCAGTTTCGCTCTTCGCGCCCCCAAATATGTAAGCCTTTTCCCCGCTAATCTTCGTTTGATTTTCCATCTGATTTCGATTCTGGTTCAGTGTGCTTGTTATATCGATCCATTCTCGGGTTTTGATTTCTGGTTTTTTGTTTGTGATTTTAAAATGGTGATTTGAATCGGAACTGTCCGTTGTATTTCTTTTTTCATNCCCCCAAATATGTAAGCCTTTTCCCCGCTAATCTTCGTTTGATTTTCCATCTGATTTCGATTCTGGTTCAGTGTGCTTGTTATATCGATCCATTCTCGGGTTTTGATTTCTGGTTTTTTGTTTGTGATTATAAAATGGTGATTTGAATCAGAATTGCTCCTTCTCCTTTCAAAATATGTAAGCCTTTCCCCTACTAATCTTCGAAACTAAAAGGTAGACTAAAGCTAAGACCAAGTCACACGAGCAACATAGCTAGGTAAGAGCCCAAAACTAAAGACCAAAAAACAAACACTAAAATTTTACCACTAAACTTAGTCTTAACGAGGAAGAATTAATAGACCTTTCCAGGTAGTACAATTCCTTTACCTTTACTATCGACCAAGAAGAATCGTTCAGTAAGTAATAGGATTATTCAATTATATGGTCTTTTAACAAAGGGATATATAAAGTTACTATTTTACTTTAATGTTTTACTACCTTAGTTTAGGTTATCTAATGTTTAAACTATTCTTATGTGCAATAAATTGGTTGATCGGTAAAGATACGTGTACTTGATGTCCCGCCCAAGAAAGAGACCCGCTCAATGAACATGTCTCAGAGAATATCCCAAATTTCATTAGATAAGGCAGTCTGCCAACCAAAAGCCACTAGGATGTGTTCCCAAAAAGATCTAGCCTGTTTACACCAAATGAAAAGGTGACTATGTGTTTGCTCATCATATTTGTAAAAAATGCAGCAACTAGGAGAGATATTAATCCATGGAGATCTTCTTTGCAGCTTGTCGTGAGTATTAAGGCATGAAGGAAAAACTTCTACTTTTTAGGAAAATTTCCTTTCCAAATGGAAAGATATAGGTCGTTTTTATCATGATCACCAGCTGAGGATAGAAACTTGGAGAGGGATTCTGATGAGAAAGCCCCATCTTTTCCAAATTCCAGGACCAAAAATCGTTAGTATCATTGAGAACAACGACGGCAAGAGCATCAGATAGGCTGGTTCATTCCTCTATTTCCCTACCTGCAGGTTTCTCCTTGGCCAAAAATTTCAAGAAGGCAATGAATTATTCCATAAATTAGCCATTGAGGCTTCTTTTTTCTGTATGATAGCAAACATAGAGGTAAACTTGTCTTTTAGGGCACTATTTTCCAACCAAAACGGTGTGCCATCTCCTTTCCCTACCTTGCAGATGATGATATTTTTCCTTATGAAATTCCAAATCCACTTAACCAACAAGGAAGTATTTTTCTGTTCTAGATCTGCAATCCTCCTTCTTCCTTCTCGGGGAGCTTGATTGTTTCTCAATCAAGATTGTGTGTACCTTTCTTCTCCTTGTCGCCCTTCCACACTACAAGTTTCGAAATAGTCTCTCAATGGATGCCGTGATCTTTGTGAGGATGGGAAGGGGATAAATGATAGATGGGTAAGTTGGCCTAACTTGCTTGAATCAGATTTATGTGACCACTTCTTTGGGGGTGCATGGGTTAATCTCTAGTGAAAACTGTGGTATTTAGCTGATGAAAGGGTTTGCTTCAAAAGGTGGGTTGATTTATACTATCAAAGGGGGCAGAAGAAGACAATGGGAGGTGGAGACTTGCAAGGATGAAACTCTATATGTAATAGTNCAACTGTATATATGTAATAGTCCAAGCCCACCACTAGCACATATTGTCCACTTTGGTCAGCCTCACGGTTTTAAAATGTGTTTACTAGGGATAGTTTTCTACGCCCTTATAAGAAATGTTTCGTTTCCCTCNGCAAGGATGAAACTCTATATGTAATAGTCCAAGCCCACCACTAGCACCACTAGCACATATTGTCCATTTTGGTCAGCCTCACGGTTTTAAAATGTGTTTACTAGGGATAGTTTTCTACGCCCTTATAAGAAATGTTTCGTTTCCCTCTCCAACCAATGTGGGATCTCACAATCCACCCCCTTGGGGGCCCAGCGTCCTCGCTGGCACACCGCCCTGTGTCTGGCTCTGATACCATTTGTAACAGTTCAAGTCTGCCGCTAGTAGATATTGTCCACTTTGGACTGTTACATATCCCCGTTAGCCTCACGATTTCAAAACATGTCTACTAGGGAGAGGTTTCCACACCCTTATAAGAAATGTTTCGTTCCCCTCTCCAACCTANTTCAAGTCTGCCGCTAGTAGATATTGTCCACTTTGGACCGTTACATATCCCCGTCAGCCTCACGATTTCAAAACATGTCTACTAGGGAGAGGTTTCCACACCTTTATAAGAAATGTTTCGTTCCCCTCTCCAACCTATGTGGGATCCCACAATATATGTTCTCTTATAGACTTTGAAATTAGGTTTGGAGCATAACTTACATTAGAAGATCCTTTTGCAGAATGTTTTGATGTGCTATTAGCCTTCATTTTGTGAATATGGTTTTTTCTTTTTCACGTACACTGTTTAGTATGATGCAGTTCGTTAAATATTTCACTTTCAGGTTGAGGTTAAATTTGCAGATGGAAGTGTGTTCAACTTGTCAGCTGAATTCTTGAGAGTATATAGCCCAGCTGCTGATGCTAAGGTTCGGTCAATTGGGGGTGAAAAGGTACTGTAAAACAACTTTAGTTTCATATATCTTTCTATCTAAAACTCAAGCTAATTCATCATGGGCAATGGTCAAATAGCCAAATTGGATGGTTGGATGATTTTTAAGGCTAGTGCTTTTAAATGAAATATTTCAACTCAAGCCTACTGCTAGTAGATATTGTCCGCTTTGGCCCATTACGTATCGCTATCAACCTCACGGTTTTAAAATGCGTTTACTATGGAGAAGTTTCCACACTCTTATAAAAAATGTTTCGTTCCCCTCTCCAACCAATGTGGGATCTAACAATCCACCCCCCTCGAGGACCTAGCGTTCTCGCTGGCACACCGCCCCGTATCTGGCTTTGATACCATTTGTAACAGTCCAAGCCCACTACTAGTAGGTATTGTCCGTTTTGACTCGTTACATATCGCTGTCAGTCTCAGTTTTAAAATGCGTCTACAAGAGAGAAGTTTCTACACCCTTATAAGCAATGTTTCGTTCCCTTTTCCAACCAACGTGGGATCTCACATGCATTTTGACTATTAGAAAACAAGCTAACTAGATAGATGACTTCTATGGTTTGGACTATTTCTCTTTGAGCCCCACCCCATGAAACACTTCTTTTATAAATACTTTTGAAAAAAAAACAATTAACTTCTTGCCATTCTGAAAGTCATACCATACTCACCCTATACATCCTACAACTTTTCTAGCGTTAAATATTGTAATGACAAACTAATATCATAAAGTTAGTTGATGTATATGTAAATTGGTTCGAACACTCAAACCTGATTAGGTTAGGACTAAGTGTAAATAATTTCACCGACTTTAAGATATTCAGACACGATCGGTTTATAGAGATATCATTAGCCATATTCTAGAGTTTGGAGTATAAAATAACTGGTGCACGTGGGTTGGCCAAACTGTTCATTTAGCACGATTTTCTGTTTAGCCACGTTCTCATGATCCGATCCTTCTACTGATATATCAACATCATCTAGAACTTTAACTGATTTTGTTTTATCAGATTCAATTACTAAATGCACGTTTCAAACTTAGGTAATTTCTGGACGACGTCACGTCAGTATCATGTCTGCAGAACCAGTTGGGAACTATGGGGTAAGGTACTTTGAAACTACTAGCTACCATTAACTTTAGCAATCTTTTGGTATTGACTTTGAAGAATCCAAACATATTGCTTGAATTTGGTAGGATCCTTTTTGATGACTTACATAGAACTGGAATTTATTCGTGGGATTATTTCTATCATCTNTTTAGCAATCTTTTGGTATTGACTTTGAAGAATCCAAACATATTGCTTGAATTTGGTAGGATCCTTTTTGATGACTTACATAGAACTGGAATTTATTCGTGGGATTATTTCTATCATCTGGGGAGCAACAAGTTTACATTCTTGAGAAATTATGTTAAAACACTAAAGAAGCATGGACTGAGCCGAGATCCACCGAAGAGAAAGTGA

mRNA sequence

AAAGTTAAGAGGCCGTGGTTCGAACCCAATGCACAGCAGTTAGGCGCGAAACTCGAACCAAAATCAGTCGGCCAAACGAATCAGAGAGACGATGTTAACTCTGCATANTTACAGAATAATGTTGAGAAAAGTTAAGAGGCCGTGGTTCGATCCCAATCCACAGCAGTTAGGCGCGAAACTCGAACCAAAATCAGTCGGCCAGACGAATGAGAGAGACGATGTTAGCTTTGCAAAGGGCTTTCCGGACGATCCATACCACCGTTGATGCTCCGCAAATTACCAGTTTCGCTCTTCGCGCCCCCAAATATGTTGAGGTTAAATTTGCAGATGGAAGTGTGTTCAACTTGTCAGCTGAATTCTTGAGAGTATATAGCCCAGCTGCTGATGCTAAGGTTCGGTCAATTGGGGGTGAAAAGGTAATTTCTGGACGACGTCACGTCAGTATCATGTCTGCAGAACCAGTTGGGAACTATGGGGTAAGGATCCTTTTTGATGACTTACATAGAACTGGAATTTATTCGTGGGATTATTTCTATCATCTNTTTAGCAATCTTTTGGTATTGACTTTGAAGAATCCAAACATATTGCTTGAATTTGGTAGGATCCTTTTTGATGACTTACATAGAACTGGAATTTATTCGTGGGATTATTTCTATCATCTGGGGAGCAACAAGTTTACATTCTTGAGAAATTATGTTAAAACACTAAAGAAGCATGGACTGAGCCGAGATCCACCGAAGAGAAAGTGA

Coding sequence (CDS)

ATGAGAGAGACGATGTTAGCTTTGCAAAGGGCTTTCCGGACGATCCATACCACCGTTGATGCTCCGCAAATTACCAGTTTCGCTCTTCGCGCCCCCAAATATGTTGAGGTTAAATTTGCAGATGGAAGTGTGTTCAACTTGTCAGCTGAATTCTTGAGAGTATATAGCCCAGCTGCTGATGCTAAGGTTCGGTCAATTGGGGGTGAAAAGGTAATTTCTGGACGACGTCACGTCAGTATCATGTCTGCAGAACCAGTTGGGAACTATGGGGTAAGGATCCTTTTTGATGACTTACATAGAACTGGAATTTATTCGTGGGATTATTTCTATCATCTNTTTAGCAATCTTTTGGTATTGACTTTGAAGAATCCAAACATATTGCTTGAATTTGGTAGGATCCTTTTTGATGACTTACATAGAACTGGAATTTATTCGTGGGATTATTTCTATCATCTGGGGAGCAACAAGTTTACATTCTTGAGAAATTATGTTAAAACACTAAAGAAGCATGGACTGAGCCGAGATCCACCGAAGAGAAAGTGA

Protein sequence

MRETMLALQRAFRTIHTTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVRSIGGEKVISGRRHVSIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLFSNLLVLTLKNPNILLEFGRILFDDLHRTGIYSWDYFYHLGSNKFTFLRNYVKTLKKHGLSRDPPKRK
Homology
[Close]
BLAST of Cp4.1LG03g07120 vs. TrEMBL
Match: B9GJ00_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s36230g PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.8e-41
Identity = 82/115 (71.30%), Postives = 100/115 (86.96%), Query Frame = 1 

Query: 5   MLALQRAFRTIHTTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 64
           MLA+Q+A R +HT++DAP++T F L+APK VEV++A+GS FNLSAEFLR+ SPA D KVR
Sbjct: 1   MLAIQKAIRRVHTSLDAPRLTRFTLQAPKNVEVEYANGSKFNLSAEFLRIQSPAVDGKVR 60

Query: 65  SIGGEKVISGRRHVSIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLFSNLLVL 120
           S+GGEKVI GRRHV IMSAEPVGNYGVR++FDDLH+TGIY+WD+FYHL SN   L
Sbjct: 61  SVGGEKVIVGRRHVGIMSAEPVGNYGVRMIFDDLHKTGIYTWDFFYHLGSNKFTL 115

[Close]
BLAST of Cp4.1LG03g07120 vs. TrEMBL
Match: V4TJ07_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017134mg PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.1e-41
Identity = 82/115 (71.30%), Postives = 99/115 (86.09%), Query Frame = 1 

Query: 5   MLALQRAFRTIHTTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 64
           MLA+Q+A R +HT +DAP +T F+L APK VE++FA+GS F LSAE+LR++SPAAD K+R
Sbjct: 1   MLAIQKAIRRLHTALDAPPLTRFSLNAPKNVEIEFANGSKFTLSAEYLRIHSPAADGKIR 60

Query: 65  SIGGEKVISGRRHVSIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLFSNLLVL 120
           S+GGEKVI GRRHV IMSAEPVGNYGVRI+FDDLH+TGIYSWDYFY+L SN   L
Sbjct: 61  SVGGEKVIFGRRHVGIMSAEPVGNYGVRIVFDDLHKTGIYSWDYFYYLGSNKFTL 115

[Close]
BLAST of Cp4.1LG03g07120 vs. TrEMBL
Match: M5WRM3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013164mg PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.1e-41
Identity = 87/127 (68.50%), Postives = 100/127 (78.74%), Query Frame = 1 

Query: 5   MLALQRAFRTIHTTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 64
           M A+QRA R  H TV+AP++T  +L AP+ VEV+F +GSVFNLSAEFLR++SPA DAKVR
Sbjct: 1   MSAIQRAIRRFHATVNAPRLTRLSLHAPRCVEVEFGNGSVFNLSAEFLRIHSPAVDAKVR 60

Query: 65  SIGGEKVISGRRHVSIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLFSNLLVLTLKNP 124
           SI GEKVISGRRHV IMSAEPVGNYGVRI+FDDLH TGIYSWDY YHL SN   L     
Sbjct: 61  SIAGEKVISGRRHVGIMSAEPVGNYGVRIVFDDLHNTGIYSWDYLYHLGSNKFSLMRNYI 120

Query: 125 NILLEFG 132
             L ++G
Sbjct: 121 KTLNKYG 127

[Close]
BLAST of Cp4.1LG03g07120 vs. TrEMBL
Match: A0A0K9QV04_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_145250 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.9e-41
Identity = 86/116 (74.14%), Postives = 100/116 (86.21%), Query Frame = 1 

Query: 5   MLALQRAFRTIH-TTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKV 64
           MLALQRA R++H    DAP++T F+LR PK VEV+FADG  FNLSAEFLRVYSPAAD+K+
Sbjct: 3   MLALQRAARSMHIAAADAPRLTRFSLRPPKSVEVEFADGRAFNLSAEFLRVYSPAADSKI 62

Query: 65  RSIGGEKVISGRRHVSIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLFSNLLVL 120
           RSIGGEKVI GRRHV IMSAEPVGNYGVR+LFDDLH+TGIY+W+YF++L SN   L
Sbjct: 63  RSIGGEKVIFGRRHVGIMSAEPVGNYGVRLLFDDLHKTGIYTWNYFFYLGSNKFTL 118

[Close]
BLAST of Cp4.1LG03g07120 vs. TrEMBL
Match: K4BDG9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-39
Identity = 78/115 (67.83%), Postives = 100/115 (86.96%), Query Frame = 1 

Query: 5   MLALQRAFRTIHTTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 64
           M  ++R  R+I+TTVD+P++T FAL+ PK+VEV+F +GS++ LSAE+LR+YSPA D+K+R
Sbjct: 1   MNVIRRGVRSIYTTVDSPRLTRFALQPPKFVEVEFENGSLYKLSAEYLRIYSPAVDSKIR 60

Query: 65  SIGGEKVISGRRHVSIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLFSNLLVL 120
           SI GEKVISGRRHV IMSAEP+GNYGVR+LFDDLH+TGI++WDYFYHL SN   L
Sbjct: 61  SICGEKVISGRRHVGIMSAEPIGNYGVRLLFDDLHKTGIFTWDYFYHLGSNKFAL 115

[Close]
BLAST of Cp4.1LG03g07120 vs. TAIR10
Match: AT3G27340.1 (AT3G27340.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-37
Identity = 75/114 (65.79%), Postives = 93/114 (81.58%), Query Frame = 1 

Query: 5   MLALQRAF-RTIHTT--VDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADA 64
           M A+ R   R +H T  +  P+++ F++ +PK VEV++ADG+ FN S+EFLR++SPAAD 
Sbjct: 1   MWAITRVISRRVHGTSFITIPKLSGFSIVSPKQVEVEYADGTKFNFSSEFLRIHSPAADG 60

Query: 65  KVRSIGGEKVISGRRHVSIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLFSN 116
           KVRSIGGEKVISGRR+V IMSAEPVGNYGVR++FDDLHRTGIY WDYFY L SN
Sbjct: 61  KVRSIGGEKVISGRRYVGIMSAEPVGNYGVRLVFDDLHRTGIYPWDYFYELGSN 114

[Close]
BLAST of Cp4.1LG03g07120 vs. NCBI nr
Match: gi|778688690|ref|XP_004145682.2| (PREDICTED: uncharacterized protein LOC101219823 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 104/118 (88.14%), Postives = 108/118 (91.53%), Query Frame = 1 

Query: 2   RETMLALQRAFRTIHTTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADA 61
           RE ML L R FRTIHTT+DAPQIT+FAL APKYVEVKFADGSVFNLSAEFLRVYSPAADA
Sbjct: 352 REAMLPLHRLFRTIHTTLDAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADA 411

Query: 62  KVRSIGGEKVISGRRHVSIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLFSNLLVL 120
           K+RSIGGEKVISGRRHV IMSAEPVGNYGVRILFDDLHRTGIYSWDYF+HL SN   L
Sbjct: 412 KIRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTL 469

[Close]
BLAST of Cp4.1LG03g07120 vs. NCBI nr
Match: gi|659098262|ref|XP_008450051.1| (PREDICTED: uncharacterized protein LOC103491759 isoform X1 [Cucumis melo])

HSP 1 Score: 210.3 bits (534), Expect = 2.8e-51
Identity = 104/118 (88.14%), Postives = 108/118 (91.53%), Query Frame = 1 

Query: 2   RETMLALQRAFRTIHTTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADA 61
           RETML L R FRTIHTT++APQIT+FAL APKYVEVKFADGSVFNLSAEFLR+YSPAADA
Sbjct: 20  RETMLPLNRLFRTIHTTLNAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRIYSPAADA 79

Query: 62  KVRSIGGEKVISGRRHVSIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLFSNLLVL 120
           KVRSIGGEKVI GRRHV IMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHL SN   L
Sbjct: 80  KVRSIGGEKVIFGRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLGSNKFTL 137

[Close]
BLAST of Cp4.1LG03g07120 vs. NCBI nr
Match: gi|1009124286|ref|XP_015878985.1| (PREDICTED: myb-related protein 315-like [Ziziphus jujuba])

HSP 1 Score: 179.5 bits (454), Expect = 5.3e-42
Identity = 87/127 (68.50%), Postives = 104/127 (81.89%), Query Frame = 1 

Query: 5   MLALQRAFRTIHTTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 64
           MLA+Q   R IH+ VDAP++T F L AP+ V+V+F++GSVFNLSAEFLR++SPAAD K+R
Sbjct: 327 MLAMQSVSRRIHSMVDAPRLTKFFLEAPQSVKVEFSNGSVFNLSAEFLRIHSPAADGKLR 386

Query: 65  SIGGEKVISGRRHVSIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLFSNLLVLTLKNP 124
           SIGGEKVISGRRHV IMSAEPVGNYGVR++FDDLH+TGIYSWDYFYHL SN   L     
Sbjct: 387 SIGGEKVISGRRHVGIMSAEPVGNYGVRLIFDDLHKTGIYSWDYFYHLGSNKFSLMRNYI 446

Query: 125 NILLEFG 132
             L ++G
Sbjct: 447 KTLRKYG 453

[Close]
BLAST of Cp4.1LG03g07120 vs. NCBI nr
Match: gi|743903702|ref|XP_011045206.1| (PREDICTED: uncharacterized protein LOC105140179 isoform X1 [Populus euphratica])

HSP 1 Score: 178.3 bits (451), Expect = 1.2e-41
Identity = 82/115 (71.30%), Postives = 100/115 (86.96%), Query Frame = 1 

Query: 5   MLALQRAFRTIHTTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 64
           MLA+Q+A R +HT++D P++T F L+APK VEV++A+GS FNLSAEFLR++SPA D KVR
Sbjct: 1   MLAIQKAIRRVHTSLDVPRLTRFTLQAPKNVEVEYANGSKFNLSAEFLRIHSPAVDGKVR 60

Query: 65  SIGGEKVISGRRHVSIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLFSNLLVL 120
           S+GGEKVI GRRHV IMSAEPVGNYGVR++FDDLH+TGIY+WDYFYHL SN   L
Sbjct: 61  SVGGEKVIVGRRHVGIMSAEPVGNYGVRMIFDDLHKTGIYTWDYFYHLGSNKFTL 115

[Close]
BLAST of Cp4.1LG03g07120 vs. NCBI nr
Match: gi|802539484|ref|XP_012071263.1| (PREDICTED: uncharacterized protein LOC105633300 [Jatropha curcas])

HSP 1 Score: 177.9 bits (450), Expect = 1.5e-41
Identity = 84/111 (75.68%), Postives = 97/111 (87.39%), Query Frame = 1 

Query: 5   MLALQRAFRTIHTTVDAPQITSFALRAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKVR 64
           MLA QRA R IHT++D P++T F L+APK VEV+FA+GS FNLS+EFLR++SPA D K R
Sbjct: 2   MLAAQRAIRLIHTSLDPPRLTRFTLQAPKCVEVEFANGSKFNLSSEFLRIHSPAVDGKTR 61

Query: 65  SIGGEKVISGRRHVSIMSAEPVGNYGVRILFDDLHRTGIYSWDYFYHLFSN 116
           SIGGEKVI GRRHV IMSAEPVGNYGVRI+FDDLH+TGIY+WDYFYHL SN
Sbjct: 62  SIGGEKVIFGRRHVGIMSAEPVGNYGVRIIFDDLHKTGIYTWDYFYHLGSN 112

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g07120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g07120 vs. TrEMBL
Match NameE-valueIdentityDescription
B9GJ00_POPTR1.8e-4171.30Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s36230g PE=4 SV=1[more]
V4TJ07_9ROSI3.1e-4171.30Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017134mg PE=4 SV=1[more]
M5WRM3_PRUPE4.1e-4168.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013164mg PE=4 SV=1[more]
A0A0K9QV04_SPIOL6.9e-4174.14Uncharacterized protein OS=Spinacia oleracea GN=SOVF_145250 PE=4 SV=1[more]
K4BDG9_SOLLC1.0e-3967.83Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Cp4.1LG03g07120 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G27340.11.4e-3765.79 FUNCTIONS IN: molecular_function unknown[more]
BLAST of Cp4.1LG03g07120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778688690|ref|XP_004145682.2|1.6e-5188.14PREDICTED: uncharacterized protein LOC101219823 [Cucumis sativus][more]
gi|659098262|ref|XP_008450051.1|2.8e-5188.14PREDICTED: uncharacterized protein LOC103491759 isoform X1 [Cucumis melo][more]
gi|1009124286|ref|XP_015878985.1|5.3e-4268.50PREDICTED: myb-related protein 315-like [Ziziphus jujuba][more]
gi|743903702|ref|XP_011045206.1|1.2e-4171.30PREDICTED: uncharacterized protein LOC105140179 isoform X1 [Populus euphratica][more]
gi|802539484|ref|XP_012071263.1|1.5e-4175.68PREDICTED: uncharacterized protein LOC105633300 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010376GBH-like_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g07120.1Cp4.1LG03g07120.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010376Domain of unknown function DUF971PFAMPF06155DUF971coord: 32..110
score: 4.8
NoneNo IPR availablePANTHERPTHR35303FAMILY NOT NAMEDcoord: 152..179
score: 3.5E-53coord: 5..111
score: 3.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g07120Cucsa.156310Cucumber (Gy14) v1cgycpeB0415
Cp4.1LG03g07120CmaCh14G006950Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g07120CmoCh14G007120Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g07120Csa3G592140Cucumber (Chinese Long) v2cpecuB610
Cp4.1LG03g07120MELO3C014841Melon (DHL92) v3.5.1cpemeB582
Cp4.1LG03g07120ClCG05G013170Watermelon (Charleston Gray)cpewcgB555
Cp4.1LG03g07120CSPI03G25850Wild cucumber (PI 183967)cpecpiB612
Cp4.1LG03g07120MELO3C014841.2Melon (DHL92) v3.6.1cpemedB695
Cp4.1LG03g07120CsaV3_3G027380Cucumber (Chinese Long) v3cpecucB0760
Cp4.1LG03g07120Bhi01G001579Wax gourdcpewgoB0772
Cp4.1LG03g07120CsGy3G024230Cucumber (Gy14) v2cgybcpeB402
Cp4.1LG03g07120Carg09684Silver-seed gourdcarcpeB0613
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g07120Cucumber (Chinese Long) v3cpecucB0739
Cp4.1LG03g07120Cucumber (Chinese Long) v3cpecucB0754
Cp4.1LG03g07120Cucurbita pepo (Zucchini)cpecpeB358
Cp4.1LG03g07120Cucurbita pepo (Zucchini)cpecpeB477
Cp4.1LG03g07120Cucurbita maxima (Rimu)cmacpeB145
Cp4.1LG03g07120Cucurbita moschata (Rifu)cmocpeB124
Cp4.1LG03g07120Cucurbita moschata (Rifu)cmocpeB125
Cp4.1LG03g07120Wild cucumber (PI 183967)cpecpiB608
Cp4.1LG03g07120Cucumber (Chinese Long) v2cpecuB605
Cp4.1LG03g07120Bottle gourd (USVL1VR-Ls)cpelsiB509
Cp4.1LG03g07120Bottle gourd (USVL1VR-Ls)cpelsiB511
Cp4.1LG03g07120Watermelon (Charleston Gray)cpewcgB563
Cp4.1LG03g07120Melon (DHL92) v3.5.1cpemeB564
Cp4.1LG03g07120Cucumber (Gy14) v2cgybcpeB106
Cp4.1LG03g07120Cucumber (Gy14) v2cgybcpeB407
Cp4.1LG03g07120Melon (DHL92) v3.6.1cpemedB669
Cp4.1LG03g07120Silver-seed gourdcarcpeB0518