Cp4.1LG03g06860 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g06860
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein transport protein Sec61 subunit gamma
LocationCp4.1LG03 : 3748431 .. 3750808 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGATCATCGGATTTGAAATTATTTTTAATATAATTTTATTCTCGAGAGTTGACCATCGGATTATCTTCTCCGTCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTGTTCGGCGTTTTATCAACCAGACAGTGGAAATTTTGAGCCCCTGCAGAGAAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCTGATCGCAAAGGTACAAATTCCGAAGCCATTTTCGTCTCTTTGATTTTGTAGTTGTTTTTAATCTTTGGCAGAGATCTTATAACCAATTTCCTCTACTCCTGGAGATTTGTAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATCGGCTTCGTGGTGATGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTTGGATCTGGTTAGGTCAGGATTCTTTTTTTACTTATGCCTCTCTAGGTTTCACTGTTTTCCGAATTGAGTAATTGCTTGATTCTTTCTCGAGGTTGCGTTCCTTCAATTACTAAAATAGTCCGATCTTATTGAAGGTAAACAGGTTTGATCTATGTCGAATTTCTGTGTTATCCAAGTTTAGTCCCTTTCTAGTCTTGAGCATCAAATAAAATTGGATTCTGGAGAACGGAATTGAAATCTACAGCTTCTCTTTGACTTGGGGAATAATATGATTAATGTTTTTAGATTGTTAGATTAATCTATATCTAGGGCATGTAGGTTATGAAGGAAGAAATGTTTAATTTGTTAGATAAGTATTTTAGGTATGATTCTAAGTACGCCATTGATGGGTTGATCGAGTTTTTTTTGTTCATGACTCCTCTTGGCTTTCTTGTTTCTTAAAGGTTCTCCCTATATACCATATTCCTTTCAAACAAAATTATCCTGAAGACTTGCTCTCGCCATTTCATACAATTTACATTGTCTATGAATAATGTAGGATATGTGCATCTAAACTAATCTTCTCAAACTTTCACAACCACAAGGAGAAAACACATCTAGTCTTCTACATCGATCAATCCCGAGCTCAATAACAAAATTCTGTAACCCATATCAAGCCTTGTTGATTGCACATTGTTAGCTATATAGAGGAAGGAGGGCAGGGGGGAAGGGGGGAAGGGGGGAAAACTTACCTGGGAACTGTAATTGCTCATAATACCTTACCCTTACCTTATAACACACGAAAGCTGGTGAAGACCAATTCTTGTTGGGAGAGGGAGAGCTTGTAACGTATCAAGCCCGCCGCTAGCAAATATTGTCCTCTTTGGACTTCCCCTCAAGGTTTTGAATACATGTATGCTAGAGAGAGGTTTCCACACCCTTATAAAAATGTTTCGTTACCCTCTACAACCGATGTGGGATCTTATGACCCACCCCCATCGGGACCCAACGTCCTCGCTGGCACTCGTTCCCTTCTCCAATCAATGTGGGACCCCCAATCCACCCCCTTTGGGCCAACGTCCTTGTTGGCACACCGCCTTGTGTCAACCCTCTTTGGGGCTTAGTATCCTCACTGGCACATAGCCCGATGTTTGGCTCTAATACCATTTGTAACGGCCCAAGCCCACCACTAGCCGATACGGTCCTTTTTGGGCTTTCCTTTTCGGGCTTCCCTCAAGTTTTTTAAAACACGTCTGCTAAAAAGAGGTTTCCATACCCTTATAAACAATGTTTCGTTCCTCTTCAACCGATGTGTGATCTCACATAGTCATTTGGCTCAATTTTGCATAATCATAGAGATTGATGTAGTTTGCATTCTACTTTATGTCGGCATGATTGCTCACTGTTTCCATTCCCAAATAACAGTTCCATGTAATAATTGATGAGTGTGATTGCTGGCTTGACCTCTTTTTCAGACAACATTAACTTGCGTAAAACTTTGAATTGGTTCTGCCTTTTGACAATCATTCATTATTACCTGTTGAATCTGTGTTGCAGGCAGCTGAGGCCACAAAAGGAGCAAAAGCTGGCCAAAATAGATCTACTATTTCAAATCCTTACTGATGTTTTTGTTAATTTAAAAGCTTAATTTCTCTTCCATATGGTAAGTAGCAGACTTCCATGAATGGCTGTAACGAATTGTCAGGATTATGTCTTACTTTCTGATTAATCCAATGTGTTTTGTTCATGGTTACTGGTTATTTTAGAGTAATAAAGGAACAAGTTTTGGCTTCGTCATTGGGATGAAGATTATATTTACTGCCCTTTCCTTTATGCTGTCAAGCTTTAACGATTGGCAAATTAGTAGATACACAGCAAAAGAAGCCTATATATTTTCAGTAGATTTGATTGA

mRNA sequence

TGGGATCATCGGATTTGAAATTATTTTTAATATAATTTTATTCTCGAGAGTTGACCATCGGATTATCTTCTCCGTCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTGTTCGGCGTTTTATCAACCAGACAGTGGAAATTTTGAGCCCCTGCAGAGAAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCTGATCGCAAAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATCGGCTTCGTGGTGATGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTTGGATCTGGTTAGGCAGCTGAGGCCACAAAAGGAGCAAAAGCTGGCCAAAATAGATCTACTATTTCAAATCCTTACTGATGTTTTTGTTAATTTAAAAGCTTAATTTCTCTTCCATATGGTAAGTAGCAGACTTCCATGAATGGCTGTAACGAATTGTCAGGATTATGTCTTACTTTCTGATTAATCCAATGTGTTTTGTTCATGGTTACTGGTTATTTTAGAGTAATAAAGGAACAAGTTTTGGCTTCGTCATTGGGATGAAGATTATATTTACTGCCCTTTCCTTTATGCTGTCAAGCTTTAACGATTGGCAAATTAGTAGATACACAGCAAAAGAAGCCTATATATTTTCAGTAGATTTGATTGA

Coding sequence (CDS)

ATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCTGATCGCAAAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATCGGCTTCGTGGTGATGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTTGGATCTGGTTAG

Protein sequence

MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG
Homology
[Close]
BLAST of Cp4.1LG03g06860 vs. Swiss-Prot
Match: SC61G_ORYSJ (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica GN=Os02g0178400 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.3e-30
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSV DPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG03g06860 vs. Swiss-Prot
Match: S61G2_ARATH (Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana GN=SEC61G2 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.6e-29
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of Cp4.1LG03g06860 vs. Swiss-Prot
Match: S61G1_ARATH (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana GN=SEC61G1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.6e-29
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of Cp4.1LG03g06860 vs. Swiss-Prot
Match: S61G3_ARATH (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana GN=SEC61G3 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.1e-27
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+AIDS  DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]
BLAST of Cp4.1LG03g06860 vs. Swiss-Prot
Match: S61G1_GRYOR (Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis GN=SEC61G PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.5e-21
Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MD +    +P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+GFFVKLI IP
Sbjct: 1  MDQVTKFIEPGRQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFCIMGFIGFFVKLIHIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]
BLAST of Cp4.1LG03g06860 vs. TrEMBL
Match: A0A0D2TL23_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G086400 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.0e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG03g06860 vs. TrEMBL
Match: M5WRW7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014443mg PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.3e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREF+KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFSKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG03g06860 vs. TrEMBL
Match: A0A0D2T664_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G073400 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.3e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVALRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG03g06860 vs. TrEMBL
Match: G7JTA3_MEDTR (Protein transporter Sec61 subunit gamma-like protein OS=Medicago truncatula GN=MTR_4g127150 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.0e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEF+KVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFSKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG03g06860 vs. TrEMBL
Match: I1LTE6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G258900 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.0e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEF+KVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFSKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG03g06860 vs. TAIR10
Match: AT4G24920.1 (AT4G24920.1 secE/sec61-gamma protein transport protein)

HSP 1 Score: 128.6 bits (322), Expect = 1.4e-30
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of Cp4.1LG03g06860 vs. TAIR10
Match: AT5G50460.1 (AT5G50460.1 secE/sec61-gamma protein transport protein)

HSP 1 Score: 128.6 bits (322), Expect = 1.4e-30
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of Cp4.1LG03g06860 vs. TAIR10
Match: AT3G48570.1 (AT3G48570.1 secE/sec61-gamma protein transport protein)

HSP 1 Score: 123.2 bits (308), Expect = 6.1e-29
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+AIDS  DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]
BLAST of Cp4.1LG03g06860 vs. NCBI nr
Match: gi|449455852|ref|XP_004145664.1| (PREDICTED: protein transport protein Sec61 subunit gamma-like [Cucumis sativus])

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG03g06860 vs. NCBI nr
Match: gi|823185288|ref|XP_012489479.1| (PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii])

HSP 1 Score: 135.6 bits (340), Expect = 3.3e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVALRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG03g06860 vs. NCBI nr
Match: gi|595930399|ref|XP_007215225.1| (hypothetical protein PRUPE_ppa014443mg [Prunus persica])

HSP 1 Score: 135.6 bits (340), Expect = 3.3e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREF+KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFSKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG03g06860 vs. NCBI nr
Match: gi|356501180|ref|XP_003519405.1| (PREDICTED: protein transport protein Sec61 subunit gamma [Glycine max])

HSP 1 Score: 135.2 bits (339), Expect = 4.4e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEF+KVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFSKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of Cp4.1LG03g06860 vs. NCBI nr
Match: gi|823129040|ref|XP_012445899.1| (PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii])

HSP 1 Score: 135.2 bits (339), Expect = 4.4e-29
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTA+GFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVALRTAVGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g06860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SC61G_ORYSJ2.3e-3095.65Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica GN... [more]
S61G2_ARATH2.6e-2994.12Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana GN=SEC61... [more]
S61G1_ARATH2.6e-2994.12Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana GN=SEC61... [more]
S61G3_ARATH1.1e-2789.71Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana GN=SEC61... [more]
S61G1_GRYOR1.5e-2173.53Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis GN=SEC61... [more]
BLAST of Cp4.1LG03g06860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2TL23_GOSRA1.0e-29100.00Uncharacterized protein OS=Gossypium raimondii GN=B456_012G086400 PE=3 SV=1[more]
M5WRW7_PRUPE2.3e-2998.55Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014443mg PE=3 SV=1[more]
A0A0D2T664_GOSRA2.3e-2998.55Uncharacterized protein OS=Gossypium raimondii GN=B456_007G073400 PE=3 SV=1[more]
G7JTA3_MEDTR3.0e-2998.55Protein transporter Sec61 subunit gamma-like protein OS=Medicago truncatula GN=M... [more]
I1LTE6_SOYBN3.0e-2998.55Uncharacterized protein OS=Glycine max GN=GLYMA_02G258900 PE=3 SV=1[more]
BLAST of Cp4.1LG03g06860 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24920.11.4e-3094.12 secE/sec61-gamma protein transport protein[more]
AT5G50460.11.4e-3094.12 secE/sec61-gamma protein transport protein[more]
AT3G48570.16.1e-2989.71 secE/sec61-gamma protein transport protein[more]
BLAST of Cp4.1LG03g06860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449455852|ref|XP_004145664.1|1.5e-29100.00PREDICTED: protein transport protein Sec61 subunit gamma-like [Cucumis sativus][more]
gi|823185288|ref|XP_012489479.1|3.3e-2998.55PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimond... [more]
gi|595930399|ref|XP_007215225.1|3.3e-2998.55hypothetical protein PRUPE_ppa014443mg [Prunus persica][more]
gi|356501180|ref|XP_003519405.1|4.4e-2998.55PREDICTED: protein transport protein Sec61 subunit gamma [Glycine max][more]
gi|823129040|ref|XP_012445899.1|4.4e-2997.10PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimond... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0015450P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
GO:0006886intracellular protein transport
GO:0006605protein targeting
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR023391Prot_translocase_SecE_dom_sf
IPR022943SecE
IPR008158Translocase_Sec61-g
IPR001901Translocase_SecE/Sec61-g
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006605 protein targeting
biological_process GO:0071806 protein transmembrane transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0015031 protein transport
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005622 intracellular
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g06860.1Cp4.1LG03g06860.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 13..65
score: 1.1
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPROSITEPS01067SECE_SEC61Gcoord: 14..42
scor
IPR008158Protein translocase SEC61 complex, gamma subunitTIGRFAMsTIGR00327TIGR00327coord: 11..66
score: 1.8
IPR022943Preprotein translocase subunit SecEHAMAPMF_00422SecEcoord: 9..64
score: 12
IPR023391Protein translocase SecE domainGENE3DG3DSA:1.20.5.820coord: 7..58
score: 4.
IPR023391Protein translocase SecE domainunknownSSF103456Preprotein translocase SecE subunitcoord: 5..65
score: 1.44
NoneNo IPR availablePANTHERPTHR12309SEC61 GAMMA SUBUNITcoord: 1..69
score: 4.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g06860Cucsa.054090Cucumber (Gy14) v1cgycpeB0062
Cp4.1LG03g06860CmaCh14G007220Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g06860CmoCh14G007370Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g06860Cla004078Watermelon (97103) v1cpewmB608
Cp4.1LG03g06860MELO3C014891Melon (DHL92) v3.5.1cpemeB582
Cp4.1LG03g06860ClCG06G017920Watermelon (Charleston Gray)cpewcgB563
Cp4.1LG03g06860ClCG05G013560Watermelon (Charleston Gray)cpewcgB555
Cp4.1LG03g06860CSPI03G25490Wild cucumber (PI 183967)cpecpiB612
Cp4.1LG03g06860Lsi07G014800Bottle gourd (USVL1VR-Ls)cpelsiB514
Cp4.1LG03g06860MELO3C014891.2Melon (DHL92) v3.6.1cpemedB695
Cp4.1LG03g06860CsaV3_3G026970Cucumber (Chinese Long) v3cpecucB0760
Cp4.1LG03g06860CsaV3_1G000530Cucumber (Chinese Long) v3cpecucB0739
Cp4.1LG03g06860Bhi01G001614Wax gourdcpewgoB0772
Cp4.1LG03g06860CsGy3G023920Cucumber (Gy14) v2cgybcpeB407
Cp4.1LG03g06860Carg09658Silver-seed gourdcarcpeB0613
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g06860Cucurbita pepo (Zucchini)cpecpeB358
Cp4.1LG03g06860Cucurbita pepo (Zucchini)cpecpeB477
Cp4.1LG03g06860Cucumber (Gy14) v1cgycpeB0416
Cp4.1LG03g06860Cucurbita maxima (Rimu)cmacpeB145
Cp4.1LG03g06860Cucurbita moschata (Rifu)cmocpeB124
Cp4.1LG03g06860Cucurbita moschata (Rifu)cmocpeB125
Cp4.1LG03g06860Wild cucumber (PI 183967)cpecpiB608
Cp4.1LG03g06860Cucumber (Chinese Long) v2cpecuB605
Cp4.1LG03g06860Cucumber (Chinese Long) v2cpecuB610
Cp4.1LG03g06860Bottle gourd (USVL1VR-Ls)cpelsiB511
Cp4.1LG03g06860Watermelon (Charleston Gray)cpewcgB560
Cp4.1LG03g06860Watermelon (97103) v1cpewmB609
Cp4.1LG03g06860Melon (DHL92) v3.5.1cpemeB564
Cp4.1LG03g06860Melon (DHL92) v3.5.1cpemeB584
Cp4.1LG03g06860Cucumber (Gy14) v2cgybcpeB106
Cp4.1LG03g06860Cucumber (Gy14) v2cgybcpeB402
Cp4.1LG03g06860Melon (DHL92) v3.6.1cpemedB669
Cp4.1LG03g06860Silver-seed gourdcarcpeB0518
Cp4.1LG03g06860Cucumber (Chinese Long) v3cpecucB0754
Cp4.1LG03g06860Wax gourdcpewgoB0794