Cp4.1LG03g06650 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g06650
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGlutaredoxin family protein
LocationCp4.1LG03 : 3808499 .. 3808870 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTACCAAGCCCAACAACAATACGGAGCATCCTCTTCGTCCTCCTCTCCGATGCGGCGGATAGAGCGGATGGCGGCGGAGAACGCGGTGGTGATGTTCAGCATAAGTTCATGCTGCATGTGCCACGCGGTGAAGCGTCTCTTTTGTGGAATGGGAGTGAACCCGACAGTGTACGAGCTGGACGAGGATCCACGTGGCAAAGAGATTGAGAAAGCGTTGATGCGGTTAATGGGAAGCTCATCCTCCGCCGCCGTCCCCGCCGTCTTCATCGGTGGCAAGCTTGTCGGCTCCATGGATAGAGTCATGGCGTCTCATATCAATGGCTCACTCGTCCCCCTTCTCAAGAACGCCGGCGCTCTTTGGCTCTAA

mRNA sequence

ATGCAGTACCAAGCCCAACAACAATACGGAGCATCCTCTTCGTCCTCCTCTCCGATGCGGCGGATAGAGCGGATGGCGGCGGAGAACGCGGTGGTGATGTTCAGCATAAGTTCATGCTGCATGTGCCACGCGGTGAAGCGTCTCTTTTGTGGAATGGGAGTGAACCCGACAGTGTACGAGCTGGACGAGGATCCACGTGGCAAAGAGATTGAGAAAGCGTTGATGCGGTTAATGGGAAGCTCATCCTCCGCCGCCGTCCCCGCCGTCTTCATCGGTGGCAAGCTTGTCGGCTCCATGGATAGAGTCATGGCGTCTCATATCAATGGCTCACTCGTCCCCCTTCTCAAGAACGCCGGCGCTCTTTGGCTCTAA

Coding sequence (CDS)

ATGCAGTACCAAGCCCAACAACAATACGGAGCATCCTCTTCGTCCTCCTCTCCGATGCGGCGGATAGAGCGGATGGCGGCGGAGAACGCGGTGGTGATGTTCAGCATAAGTTCATGCTGCATGTGCCACGCGGTGAAGCGTCTCTTTTGTGGAATGGGAGTGAACCCGACAGTGTACGAGCTGGACGAGGATCCACGTGGCAAAGAGATTGAGAAAGCGTTGATGCGGTTAATGGGAAGCTCATCCTCCGCCGCCGTCCCCGCCGTCTTCATCGGTGGCAAGCTTGTCGGCTCCATGGATAGAGTCATGGCGTCTCATATCAATGGCTCACTCGTCCCCCTTCTCAAGAACGCCGGCGCTCTTTGGCTCTAA

Protein sequence

MQYQAQQQYGASSSSSSPMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL
Homology
[Close]
BLAST of Cp4.1LG03g06650 vs. Swiss-Prot
Match: GRXC5_ORYSJ (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-40
Identity = 79/114 (69.30%), Postives = 103/114 (90.35%), Query Frame = 1 

Query: 12  SSSSSSPMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIE 71
           ++++ +   R+ER+A+E+AVV+FS+SSCCMCHAVKRLFCGMGV+P V+ELD DPRG+++E
Sbjct: 22  AAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAVHELDLDPRGRDLE 81

Query: 72  KALMRLMGS--SSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 124
           +AL RL+G+  +++AAVP VFIGGKLVG+MDRVMA+HINGSLVPLLK AGALWL
Sbjct: 82  RALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGALWL 135

[Close]
BLAST of Cp4.1LG03g06650 vs. Swiss-Prot
Match: GRXC3_ORYSJ (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.4e-40
Identity = 88/135 (65.19%), Postives = 108/135 (80.00%), Query Frame = 1 

Query: 1   MQY--QAQQQYGASSSSSSPM-----RRIERMAAENAVVMFSISSCCMCHAVKRLFCGMG 60
           MQY   A+Q +   +++ +PM      R+ER+A+E+AVV+FS+SSCCMCHAVKRLFCGMG
Sbjct: 1   MQYGAAAEQAWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMG 60

Query: 61  VNPTVYELDEDPRGKEIEKALMRLMGSSSSAA-----VPAVFIGGKLVGSMDRVMASHIN 120
           V+PTV+ELD DPRG+E+E+AL RL+G    AA     VP VFIGGKLVG+MDRVMA+HIN
Sbjct: 61  VHPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHIN 120

Query: 121 GSLVPLLKNAGALWL 124
           GSLVPLLK AGALWL
Sbjct: 121 GSLVPLLKEAGALWL 135

[Close]
BLAST of Cp4.1LG03g06650 vs. Swiss-Prot
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.7e-37
Identity = 75/105 (71.43%), Postives = 91/105 (86.67%), Query Frame = 1 

Query: 19  MRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLM 78
           M R+ R+AA+ AVV+FS+SSCCMCH V RLFC +GVNPTV ELDEDPRGKE+EKAL RL+
Sbjct: 1   MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 79  GSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 124
           G   S AVPAVFIGG+LVGS D+VM+ H++G+LVPLL+NAGALW+
Sbjct: 61  G--RSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]
BLAST of Cp4.1LG03g06650 vs. Swiss-Prot
Match: GRXC8_ARATH (Glutaredoxin-C8 OS=Arabidopsis thaliana GN=GRXC8 PE=1 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 1.7e-36
Identity = 77/113 (68.14%), Postives = 93/113 (82.30%), Query Frame = 1 

Query: 16  SSPMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALM 75
           S  + +IE MAAENAVV+FS+S+CCMCHA+KRLF GMGV+P V+ELD  P G EI +AL+
Sbjct: 28  SETLAKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALL 87

Query: 76  RLMGSSSS-----AAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 124
           RL+G SS       A+P VFIGGK+VG+M+RVMASHINGSLVPLLK+AGALWL
Sbjct: 88  RLLGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]
BLAST of Cp4.1LG03g06650 vs. Swiss-Prot
Match: GRXC7_ARATH (Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 4.3e-35
Identity = 82/137 (59.85%), Postives = 104/137 (75.91%), Query Frame = 1 

Query: 1   MQYQAQQQYGASSSSS-----------SPMRRIERMAAENAVVMFSISSCCMCHAVKRLF 60
           MQYQ +  +G+   SS           + + RIE +A+E+AVV+FS+S+CCMCHAVK LF
Sbjct: 1   MQYQTES-WGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVNPTVYELDEDPRGKEIEKALMRLM---GSSSSAAVPAVFIGGKLVGSMDRVMASH 120
            GMGV+P V+ELD  P G +I++AL+RL+   GSSS  ++P VFIGGKLVG+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 121 INGSLVPLLKNAGALWL 124
           INGSLVPLLK+AGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]
BLAST of Cp4.1LG03g06650 vs. TrEMBL
Match: A0A0A0LB28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G563270 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.1e-53
Identity = 114/129 (88.37%), Postives = 119/129 (92.25%), Query Frame = 1 

Query: 1   MQYQAQQQYGASSSSSS------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGAS+SSSS      PMRRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPL 120
             TVYELDEDPRGKEIEKALMRLMGSSS  AVPAVFIGGKL+GSMDRVMASHINGSLVPL
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSS--AVPAVFIGGKLIGSMDRVMASHINGSLVPL 120

Query: 121 LKNAGALWL 124
           LK+AGALWL
Sbjct: 121 LKSAGALWL 127

[Close]
BLAST of Cp4.1LG03g06650 vs. TrEMBL
Match: F6H458_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g01570 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.4e-45
Identity = 97/125 (77.60%), Postives = 109/125 (87.20%), Query Frame = 1 

Query: 1   MQYQAQQ--QYGASSSSSSPMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTV 60
           M YQ +    Y  + S   P+ RIER+A+ENAVV+FSISSCCMCHA+KRLFCGMGVNPTV
Sbjct: 1   MHYQTESWGSYMPTRSVGDPLERIERLASENAVVIFSISSCCMCHAIKRLFCGMGVNPTV 60

Query: 61  YELDEDPRGKEIEKALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNA 120
           YELDEDPRGKE+EKALMRL+GSSS  AVP VFIGGKLVG+MDRVMASHING+LVPLLK+A
Sbjct: 61  YELDEDPRGKEMEKALMRLLGSSS--AVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDA 120

Query: 121 GALWL 124
           GALWL
Sbjct: 121 GALWL 123

[Close]
BLAST of Cp4.1LG03g06650 vs. TrEMBL
Match: W1PF59_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00016p00206670 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.2e-45
Identity = 92/111 (82.88%), Postives = 103/111 (92.79%), Query Frame = 1 

Query: 13  SSSSSPMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEK 72
           ++ + P+ R+ER+AAENAVV+FSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKE+EK
Sbjct: 5   TAGTDPLERVERLAAENAVVIFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEMEK 64

Query: 73  ALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 124
           AL+RL+GSS   AVPAVFIGGKL+G MDRVMASHINGSLVPLLK AGALWL
Sbjct: 65  ALVRLLGSSQ--AVPAVFIGGKLIGPMDRVMASHINGSLVPLLKEAGALWL 113

[Close]
BLAST of Cp4.1LG03g06650 vs. TrEMBL
Match: M5WW88_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020474mg PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.4e-45
Identity = 96/128 (75.00%), Postives = 111/128 (86.72%), Query Frame = 1 

Query: 1   MQYQAQQQYGA-----SSSSSSPMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVN 60
           MQYQ +  +G+     SS    P+ RIERMA+ENAVV+FS+SSCCMCHA+KRLFCGMGVN
Sbjct: 1   MQYQTES-WGSYMPTRSSMGGDPLERIERMASENAVVIFSVSSCCMCHAIKRLFCGMGVN 60

Query: 61  PTVYELDEDPRGKEIEKALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLL 120
           PTVYELDEDPRGK++E+ALMRL+G+SS  AVP VFIGGKLVG+MDRVMASHING+LVPLL
Sbjct: 61  PTVYELDEDPRGKDLERALMRLLGTSS--AVPVVFIGGKLVGAMDRVMASHINGTLVPLL 120

Query: 121 KNAGALWL 124
           K AGALWL
Sbjct: 121 KEAGALWL 125

[Close]
BLAST of Cp4.1LG03g06650 vs. TrEMBL
Match: B9GF65_POPTR (Glutaredoxin family protein OS=Populus trichocarpa GN=POPTR_0001s33340g PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 9.2e-45
Identity = 93/113 (82.30%), Postives = 103/113 (91.15%), Query Frame = 1 

Query: 11  ASSSSSSPMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEI 70
           A ++   P+ RI R+A+ENAVV+FSISSCCMCHA+KRLFCGMGVNPTVYELDEDPRGKE+
Sbjct: 13  ARTNLGDPLERIGRLASENAVVIFSISSCCMCHAIKRLFCGMGVNPTVYELDEDPRGKEM 72

Query: 71  EKALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 124
           EKALMRL+GSSS  AVP VFIGGKLVG+MDRVMASHINGSLVPLLK AGALWL
Sbjct: 73  EKALMRLLGSSS--AVPVVFIGGKLVGAMDRVMASHINGSLVPLLKEAGALWL 123

[Close]
BLAST of Cp4.1LG03g06650 vs. TAIR10
Match: AT5G14070.1 (AT5G14070.1 Thioredoxin superfamily protein)

HSP 1 Score: 153.3 bits (386), Expect = 9.8e-38
Identity = 77/113 (68.14%), Postives = 93/113 (82.30%), Query Frame = 1 

Query: 16  SSPMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALM 75
           S  + +IE MAAENAVV+FS+S+CCMCHA+KRLF GMGV+P V+ELD  P G EI +AL+
Sbjct: 28  SETLAKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALL 87

Query: 76  RLMGSSSS-----AAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 124
           RL+G SS       A+P VFIGGK+VG+M+RVMASHINGSLVPLLK+AGALWL
Sbjct: 88  RLLGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]
BLAST of Cp4.1LG03g06650 vs. TAIR10
Match: AT3G02000.1 (AT3G02000.1 Thioredoxin superfamily protein)

HSP 1 Score: 148.7 bits (374), Expect = 2.4e-36
Identity = 82/137 (59.85%), Postives = 104/137 (75.91%), Query Frame = 1 

Query: 1   MQYQAQQQYGASSSSS-----------SPMRRIERMAAENAVVMFSISSCCMCHAVKRLF 60
           MQYQ +  +G+   SS           + + RIE +A+E+AVV+FS+S+CCMCHAVK LF
Sbjct: 1   MQYQTES-WGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVNPTVYELDEDPRGKEIEKALMRLM---GSSSSAAVPAVFIGGKLVGSMDRVMASH 120
            GMGV+P V+ELD  P G +I++AL+RL+   GSSS  ++P VFIGGKLVG+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 121 INGSLVPLLKNAGALWL 124
           INGSLVPLLK+AGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]
BLAST of Cp4.1LG03g06650 vs. TAIR10
Match: AT4G15700.1 (AT4G15700.1 Thioredoxin superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 8.3e-29
Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = 1 

Query: 19  MRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLM 78
           M  +++M +E +VV+FS +SCCM H +K LF  +GVNPT+YELDE  RGKEIE AL +L 
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQL- 60

Query: 79  GSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 124
               S  VP VFIGG+LVG  ++VM+ H+N SLVP+LK AGALWL
Sbjct: 61  --GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]
BLAST of Cp4.1LG03g06650 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 8.3e-29
Identity = 61/105 (58.10%), Postives = 75/105 (71.43%), Query Frame = 1 

Query: 19  MRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLM 78
           M  I +M  E  VV++S SSCCM H +K L C  G NP VYELDE  RG+EIE+AL+RL 
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRL- 60

Query: 79  GSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 124
               S AVP VFIGG+LVG  + VM+ H+NGSL+P+LK AGALW+
Sbjct: 61  --GCSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]
BLAST of Cp4.1LG03g06650 vs. TAIR10
Match: AT4G15670.1 (AT4G15670.1 Thioredoxin superfamily protein)

HSP 1 Score: 122.1 bits (305), Expect = 2.4e-28
Identity = 58/105 (55.24%), Postives = 79/105 (75.24%), Query Frame = 1 

Query: 19  MRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLM 78
           M ++++M +E ++V+FS +SCCM H +K LF  +GVNPT+YELDE  RGKEIE+AL +L 
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQL- 60

Query: 79  GSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 124
               S  VP VFIGG+LVG  ++VM+ H+N SL+P+LK  GALWL
Sbjct: 61  --GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

[Close]
BLAST of Cp4.1LG03g06650 vs. NCBI nr
Match: gi|449460543|ref|XP_004148005.1| (PREDICTED: glutaredoxin-C1-like [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 5.9e-53
Identity = 114/129 (88.37%), Postives = 119/129 (92.25%), Query Frame = 1 

Query: 1   MQYQAQQQYGASSSSSS------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGAS+SSSS      PMRRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPL 120
             TVYELDEDPRGKEIEKALMRLMGSSS  AVPAVFIGGKL+GSMDRVMASHINGSLVPL
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSS--AVPAVFIGGKLIGSMDRVMASHINGSLVPL 120

Query: 121 LKNAGALWL 124
           LK+AGALWL
Sbjct: 121 LKSAGALWL 127

[Close]
BLAST of Cp4.1LG03g06650 vs. NCBI nr
Match: gi|659098441|ref|XP_008450140.1| (PREDICTED: glutaredoxin-C1-like [Cucumis melo])

HSP 1 Score: 215.3 bits (547), Expect = 5.9e-53
Identity = 114/129 (88.37%), Postives = 119/129 (92.25%), Query Frame = 1 

Query: 1   MQYQAQQQYGASSSSSS------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGAS+SSSS      PMRRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSVNDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPL 120
             TVYELDEDPRGKEIEKALMRLMGSSS  AVPAVFIGGKL+GSMDRVMASHINGSLVPL
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSS--AVPAVFIGGKLIGSMDRVMASHINGSLVPL 120

Query: 121 LKNAGALWL 124
           LK+AGALWL
Sbjct: 121 LKSAGALWL 127

[Close]
BLAST of Cp4.1LG03g06650 vs. NCBI nr
Match: gi|225451521|ref|XP_002272852.1| (PREDICTED: glutaredoxin-C1 [Vitis vinifera])

HSP 1 Score: 190.3 bits (482), Expect = 2.0e-45
Identity = 97/125 (77.60%), Postives = 109/125 (87.20%), Query Frame = 1 

Query: 1   MQYQAQQ--QYGASSSSSSPMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTV 60
           M YQ +    Y  + S   P+ RIER+A+ENAVV+FSISSCCMCHA+KRLFCGMGVNPTV
Sbjct: 1   MHYQTESWGSYMPTRSVGDPLERIERLASENAVVIFSISSCCMCHAIKRLFCGMGVNPTV 60

Query: 61  YELDEDPRGKEIEKALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNA 120
           YELDEDPRGKE+EKALMRL+GSSS  AVP VFIGGKLVG+MDRVMASHING+LVPLLK+A
Sbjct: 61  YELDEDPRGKEMEKALMRLLGSSS--AVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDA 120

Query: 121 GALWL 124
           GALWL
Sbjct: 121 GALWL 123

[Close]
BLAST of Cp4.1LG03g06650 vs. NCBI nr
Match: gi|548847057|gb|ERN06261.1| (hypothetical protein AMTR_s00016p00206670 [Amborella trichopoda])

HSP 1 Score: 189.1 bits (479), Expect = 4.5e-45
Identity = 92/111 (82.88%), Postives = 103/111 (92.79%), Query Frame = 1 

Query: 13  SSSSSPMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEK 72
           ++ + P+ R+ER+AAENAVV+FSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKE+EK
Sbjct: 5   TAGTDPLERVERLAAENAVVIFSISSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEMEK 64

Query: 73  ALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGALWL 124
           AL+RL+GSS   AVPAVFIGGKL+G MDRVMASHINGSLVPLLK AGALWL
Sbjct: 65  ALVRLLGSSQ--AVPAVFIGGKLIGPMDRVMASHINGSLVPLLKEAGALWL 113

[Close]
BLAST of Cp4.1LG03g06650 vs. NCBI nr
Match: gi|719982906|ref|XP_010250605.1| (PREDICTED: glutaredoxin-C1-like [Nelumbo nucifera])

HSP 1 Score: 189.1 bits (479), Expect = 4.5e-45
Identity = 96/125 (76.80%), Postives = 108/125 (86.40%), Query Frame = 1 

Query: 1   MQYQAQQ--QYGASSSSSSPMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTV 60
           M YQ +    Y  + S   P+ R+ER+A+ENAVV+FSIS+CCMCHA+KRLFCGMGVNPTV
Sbjct: 1   MHYQMESWGSYMPTRSVGDPLERVERLASENAVVIFSISTCCMCHAIKRLFCGMGVNPTV 60

Query: 61  YELDEDPRGKEIEKALMRLMGSSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNA 120
           YELDEDPRGKEIEKALMRL+GSSS  AVP VFIGGKLVG+MDRVMASHING+LVPLLK A
Sbjct: 61  YELDEDPRGKEIEKALMRLLGSSS--AVPVVFIGGKLVGAMDRVMASHINGTLVPLLKEA 120

Query: 121 GALWL 124
           GALWL
Sbjct: 121 GALWL 123

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g06650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRXC5_ORYSJ1.2e-4069.30Glutaredoxin-C5 OS=Oryza sativa subsp. japonica GN=GRXC5 PE=2 SV=2[more]
GRXC3_ORYSJ3.4e-4065.19Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN=GRXC3 PE=2 SV=1[more]
GRXC1_ORYSJ2.7e-3771.43Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1[more]
GRXC8_ARATH1.7e-3668.14Glutaredoxin-C8 OS=Arabidopsis thaliana GN=GRXC8 PE=1 SV=2[more]
GRXC7_ARATH4.3e-3559.85Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2[more]
BLAST of Cp4.1LG03g06650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LB28_CUCSA4.1e-5388.37Uncharacterized protein OS=Cucumis sativus GN=Csa_3G563270 PE=4 SV=1[more]
F6H458_VITVI1.4e-4577.60Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g01570 PE=4 SV=... [more]
W1PF59_AMBTC3.2e-4582.88Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00016p00206670 PE=4 SV=... [more]
M5WW88_PRUPE5.4e-4575.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020474mg PE=4 SV=1[more]
B9GF65_POPTR9.2e-4582.30Glutaredoxin family protein OS=Populus trichocarpa GN=POPTR_0001s33340g PE=4 SV=... [more]
BLAST of Cp4.1LG03g06650 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G14070.19.8e-3868.14 Thioredoxin superfamily protein[more]
AT3G02000.12.4e-3659.85 Thioredoxin superfamily protein[more]
AT4G15700.18.3e-2958.10 Thioredoxin superfamily protein[more]
AT5G18600.18.3e-2958.10 Thioredoxin superfamily protein[more]
AT4G15670.12.4e-2855.24 Thioredoxin superfamily protein[more]
BLAST of Cp4.1LG03g06650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460543|ref|XP_004148005.1|5.9e-5388.37PREDICTED: glutaredoxin-C1-like [Cucumis sativus][more]
gi|659098441|ref|XP_008450140.1|5.9e-5388.37PREDICTED: glutaredoxin-C1-like [Cucumis melo][more]
gi|225451521|ref|XP_002272852.1|2.0e-4577.60PREDICTED: glutaredoxin-C1 [Vitis vinifera][more]
gi|548847057|gb|ERN06261.1|4.5e-4582.88hypothetical protein AMTR_s00016p00206670 [Amborella trichopoda][more]
gi|719982906|ref|XP_010250605.1|4.5e-4576.80PREDICTED: glutaredoxin-C1-like [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0009055electron carrier activity
Vocabulary: INTERPRO
TermDefinition
IPR012336Thioredoxin-like_fold
IPR011905GlrX-like_pln_2
IPR002109Glutaredoxin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005623 cell
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g06650.1Cp4.1LG03g06650.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 31..96
score: 7.2
IPR002109GlutaredoxinPROFILEPS51354GLUTAREDOXIN_2coord: 19..122
score: 2
IPR011905Glutaredoxin-like, plant IITIGRFAMsTIGR02189TIGR02189coord: 22..123
score: 1.1
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 15..122
score: 5.6
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 19..122
score: 1.01
NoneNo IPR availablePANTHERPTHR10168GLUTAREDOXINcoord: 1..123
score: 5.5
NoneNo IPR availablePANTHERPTHR10168:SF62GLUTAREDOXIN-C7-RELATEDcoord: 1..123
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g06650Cucsa.053940Cucumber (Gy14) v1cgycpeB0062
Cp4.1LG03g06650CmaCh11G015270Cucurbita maxima (Rimu)cmacpeB145
Cp4.1LG03g06650CmaCh14G007380Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g06650CmoCh11G015940Cucurbita moschata (Rifu)cmocpeB124
Cp4.1LG03g06650CmoCh14G007540Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g06650Cla002161Watermelon (97103) v1cpewmB610
Cp4.1LG03g06650Csa3G563270Cucumber (Chinese Long) v2cpecuB610
Cp4.1LG03g06650MELO3C014909Melon (DHL92) v3.5.1cpemeB582
Cp4.1LG03g06650ClCG05G013840Watermelon (Charleston Gray)cpewcgB555
Cp4.1LG03g06650CSPI03G25310Wild cucumber (PI 183967)cpecpiB612
Cp4.1LG03g06650MELO3C014909.2Melon (DHL92) v3.6.1cpemedB695
Cp4.1LG03g06650MELO3C022339.2Melon (DHL92) v3.6.1cpemedB657
Cp4.1LG03g06650CsaV3_3G026810Cucumber (Chinese Long) v3cpecucB0760
Cp4.1LG03g06650CsaV3_6G007950Cucumber (Chinese Long) v3cpecucB0788
Cp4.1LG03g06650Bhi01G001637Wax gourdcpewgoB0772
Cp4.1LG03g06650Bhi12G002146Wax gourdcpewgoB0767
Cp4.1LG03g06650CsGy3G023740Cucumber (Gy14) v2cgybcpeB407
Cp4.1LG03g06650CsGy6G007620Cucumber (Gy14) v2cgybcpeB837
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g06650Cp4.1LG04g06080Cucurbita pepo (Zucchini)cpecpeB477
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g06650Bottle gourd (USVL1VR-Ls)cpelsiB511
Cp4.1LG03g06650Bottle gourd (USVL1VR-Ls)cpelsiB514
Cp4.1LG03g06650Watermelon (Charleston Gray)cpewcgB560
Cp4.1LG03g06650Watermelon (97103) v1cpewmB609
Cp4.1LG03g06650Melon (DHL92) v3.5.1cpemeB584
Cp4.1LG03g06650Cucumber (Gy14) v2cgybcpeB402
Cp4.1LG03g06650Silver-seed gourdcarcpeB0518
Cp4.1LG03g06650Silver-seed gourdcarcpeB0613
Cp4.1LG03g06650Cucumber (Chinese Long) v3cpecucB0754
Cp4.1LG03g06650Wax gourdcpewgoB0794
Cp4.1LG03g06650Cucumber (Gy14) v1cgycpeB0416
Cp4.1LG03g06650Wild cucumber (PI 183967)cpecpiB608
Cp4.1LG03g06650Cucumber (Chinese Long) v2cpecuB605