Cp4.1LG03g06400 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g06400
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTSA: Wollemia nobilis Ref_Wollemi_Transcript_16136_1020 transcribed RNA sequence
LocationCp4.1LG03 : 4029853 .. 4030476 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTCCAATCCTCTGTAAGAGTCAAGAGGCTTTGGAATGTTCTTAAGGCGACGCTTATCCTAATGGCAAGAAAGGGTCTGATCTCAAAGAGAAGGTTCATCATGGACATGAATTTAATGGTGAAGAGAGGGAAGGTGTTCAGAAAATCTATGACCAATTACTTCATGTTCCATCACCACCACCACCACTCCGGTGGAAGAGATATGACACGTGGCAGTTTCGACATACAGGACTATGAATTCCCTTGGAGCAACACTCCCATTAATCCTGTTTTTTCCCACATGTCAAAGCGCAGTACCAAATACCAGACTTACTTCCCCTGTATCAACATTCCTGTGGAGATAAAGCAACAAGAAAAGAAAGAAGAGGAAGAAGATTCATACCCAGAAGCCGAGGCGGCCTGTACTGATGCTTGTAGCTATGCTTTGAGTCCTGCAATGGTGGAGGGAAGCCCACTCGTTACCCCATTTAACGTACGGATATCAAACTATTCATCTGAGGAAGAAAATGATATTACCTGTGAAAGTGGACAAGTGGATAATCAGGCTGAGGAGTTCATCAGAAGGTTCTATGAACAGCTGAAGATGCAACGAAGCCTGCAACTACTGCAATATAACTAA

mRNA sequence

ATGGGTCTCCAATCCTCTGTAAGAGTCAAGAGGCTTTGGAATGTTCTTAAGGCGACGCTTATCCTAATGGCAAGAAAGGGTCTGATCTCAAAGAGAAGGTTCATCATGGACATGAATTTAATGGTGAAGAGAGGGAAGGTGTTCAGAAAATCTATGACCAATTACTTCATGTTCCATCACCACCACCACCACTCCGGTGGAAGAGATATGACACGTGGCAGTTTCGACATACAGGACTATGAATTCCCTTGGAGCAACACTCCCATTAATCCTGTTTTTTCCCACATGTCAAAGCGCAGTACCAAATACCAGACTTACTTCCCCTGTATCAACATTCCTGTGGAGATAAAGCAACAAGAAAAGAAAGAAGAGGAAGAAGATTCATACCCAGAAGCCGAGGCGGCCTGTACTGATGCTTGTAGCTATGCTTTGAGTCCTGCAATGGTGGAGGGAAGCCCACTCGTTACCCCATTTAACGTACGGATATCAAACTATTCATCTGAGGAAGAAAATGATATTACCTGTGAAAGTGGACAAGTGGATAATCAGGCTGAGGAGTTCATCAGAAGGTTCTATGAACAGCTGAAGATGCAACGAAGCCTGCAACTACTGCAATATAACTAA

Coding sequence (CDS)

ATGGGTCTCCAATCCTCTGTAAGAGTCAAGAGGCTTTGGAATGTTCTTAAGGCGACGCTTATCCTAATGGCAAGAAAGGGTCTGATCTCAAAGAGAAGGTTCATCATGGACATGAATTTAATGGTGAAGAGAGGGAAGGTGTTCAGAAAATCTATGACCAATTACTTCATGTTCCATCACCACCACCACCACTCCGGTGGAAGAGATATGACACGTGGCAGTTTCGACATACAGGACTATGAATTCCCTTGGAGCAACACTCCCATTAATCCTGTTTTTTCCCACATGTCAAAGCGCAGTACCAAATACCAGACTTACTTCCCCTGTATCAACATTCCTGTGGAGATAAAGCAACAAGAAAAGAAAGAAGAGGAAGAAGATTCATACCCAGAAGCCGAGGCGGCCTGTACTGATGCTTGTAGCTATGCTTTGAGTCCTGCAATGGTGGAGGGAAGCCCACTCGTTACCCCATTTAACGTACGGATATCAAACTATTCATCTGAGGAAGAAAATGATATTACCTGTGAAAGTGGACAAGTGGATAATCAGGCTGAGGAGTTCATCAGAAGGTTCTATGAACAGCTGAAGATGCAACGAAGCCTGCAACTACTGCAATATAACTAA

Protein sequence

MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHHHHHHSGGRDMTRGSFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINIPVEIKQQEKKEEEEDSYPEAEAACTDACSYALSPAMVEGSPLVTPFNVRISNYSSEEENDITCESGQVDNQAEEFIRRFYEQLKMQRSLQLLQYN
Homology
[Close]
BLAST of Cp4.1LG03g06400 vs. TrEMBL
Match: A0A0A0L6S8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G251950 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-79
Identity = 166/226 (73.45%), Postives = 181/226 (80.09%), Query Frame = 1 

Query: 1   MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHH 60
           MGLQS VR KRLWNVLK TLILMARKGLISKRRFIMDMNLMVKRGK+FRKS+TNYFMFHH
Sbjct: 1   MGLQSCVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSVTNYFMFHH 60

Query: 61  HHHHSGGRDMTRGSFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINIPVEI---- 120
           HH+HS  RDMTRG F IQDYEF  SNTPIN VFSHMSKR+TKYQ YFPCIN+PVEI    
Sbjct: 61  HHNHSSHRDMTRGVFGIQDYEFSCSNTPINSVFSHMSKRTTKYQAYFPCINLPVEIETRR 120

Query: 121 -KQQEKKEEEEDSYPEAEAAC--------------TDACSYALSPAMVEGSPLVTPFNVR 180
            +Q E +EEEEDSY EA+A                 + C++ALSPAM      V+PFNVR
Sbjct: 121 RQQDEDEEEEEDSYQEAKADSYLLMTPENTLSHLQYNGCTFALSPAM----EAVSPFNVR 180

Query: 181 ISNYSSEEENDITCESGQVDNQAEEFIRRFYEQLKMQRSLQLLQYN 208
           ISNYSSEEEN+I+ ESGQVDNQAEEFIRRFYEQLKMQ+ LQLLQYN
Sbjct: 181 ISNYSSEEENEISSESGQVDNQAEEFIRRFYEQLKMQKRLQLLQYN 222

[Close]
BLAST of Cp4.1LG03g06400 vs. TrEMBL
Match: A0A067F7W6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035841mg PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 7.7e-44
Identity = 112/210 (53.33%), Postives = 142/210 (67.62%), Query Frame = 1 

Query: 5   SSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHHHHHH 64
           +SV  KRLWNV++ T   M RKGL+SKR+ +MDMNLM+KRGK+ RKS++N  M HHHHHH
Sbjct: 8   NSVIAKRLWNVVRITFF-MVRKGLVSKRKLLMDMNLMMKRGKLLRKSLSN-LMSHHHHHH 67

Query: 65  SGGRDMTRGSFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINIPVEIKQQEKKEE 124
              + +TRGSF IQ+YEF  SN+P NPVF H+SKR      YFPCIN P  I+++E+ E 
Sbjct: 68  HHSKHVTRGSFGIQEYEFSCSNSP-NPVFFHVSKRK---HHYFPCINPPEVIEEEEEYEV 127

Query: 125 EEDSYPEAEAACTDACSYA---------LSPAMVEGSPLVTPFNVRISNYSSEEENDITC 184
           E    P+A A       Y          L+P     SPL +PF+VR+SNYSSE+END   
Sbjct: 128 E----PKAVALVPKTPEYTFNFRFDTADLAPGEKRSSPLRSPFSVRVSNYSSEDEND--T 187

Query: 185 ESGQVDNQAEEFIRRFYEQLKMQRSLQLLQ 206
            + QVD+ AE+FIRRFYEQL+ QR +QLLQ
Sbjct: 188 GNQQVDDDAEDFIRRFYEQLRSQRRMQLLQ 205

[Close]
BLAST of Cp4.1LG03g06400 vs. TrEMBL
Match: V4W2F5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016745mg PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.5e-43
Identity = 113/210 (53.81%), Postives = 142/210 (67.62%), Query Frame = 1 

Query: 5   SSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHHHHHH 64
           +SV  KRLWNV++ T   M RKGL+SKR+ +MDMNLM+KRGK+ RKS++N  M HHHHHH
Sbjct: 8   NSVIAKRLWNVVRITFF-MVRKGLVSKRKLLMDMNLMMKRGKLLRKSLSN-LMSHHHHHH 67

Query: 65  SGGRDMTRGSFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINIPVEIKQQEKKEE 124
           S  + +TRGSF IQ+YEF  SN+P NPVF H+SKR      YFPCIN P  I+++E+ E 
Sbjct: 68  S--KHVTRGSFGIQEYEFSCSNSP-NPVFFHVSKRK---HHYFPCINPPEVIEEEEEYEV 127

Query: 125 EEDSYPEAEAACTDACSYA---------LSPAMVEGSPLVTPFNVRISNYSSEEENDITC 184
           E    P+A A       Y          L+P     SPL +PF+VR+SNYSSE+END   
Sbjct: 128 E----PKAVALVPKTPEYTFNFRFDTADLAPGEKRSSPLRSPFSVRVSNYSSEDEND--T 187

Query: 185 ESGQVDNQAEEFIRRFYEQLKMQRSLQLLQ 206
            +  VD+ AEEFIRRFYEQL+ QR +QLLQ
Sbjct: 188 GNQHVDDDAEEFIRRFYEQLRSQRRMQLLQ 203

[Close]
BLAST of Cp4.1LG03g06400 vs. TrEMBL
Match: A9PEH7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s13600g PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.3e-39
Identity = 103/209 (49.28%), Postives = 140/209 (66.99%), Query Frame = 1 

Query: 5   SSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHHHHHH 64
           +S+  KRLWNVL+ T   M RKGL+SKR+ IMDMNLM+KRGK+ RKS++N    HHH HH
Sbjct: 8   NSMLAKRLWNVLRVTFF-MIRKGLVSKRKLIMDMNLMMKRGKLLRKSLSNLMSLHHHTHH 67

Query: 65  SGGRDMTRGSFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINIPVEIKQQEKKEE 124
              +D+ RGSF +Q+YEF  SN+P + VF  M KR      YFPCIN+P E+ ++++ E 
Sbjct: 68  HHSKDLARGSFGLQEYEFSCSNSP-DLVFFRMPKRK---HHYFPCINLP-EVIEEDQLEA 127

Query: 125 EEDSYPEAEAACTDACSYAL----SPAMVEG---SPLVTPFNVRISNYSSEEENDITCES 184
           EE          T   ++ +    +     G   SPL++PF+VR+S+YSSE+END    +
Sbjct: 128 EESKGAVVMVPKTPEYTFNIHFDHASEFAPGEKRSPLLSPFSVRVSDYSSEDEND--GGN 187

Query: 185 GQVDNQAEEFIRRFYEQLKMQRSLQLLQY 207
            QVD++AEEFIRRFYEQL++Q  +QLLQY
Sbjct: 188 VQVDDEAEEFIRRFYEQLRVQSRMQLLQY 208

[Close]
BLAST of Cp4.1LG03g06400 vs. TrEMBL
Match: A0A151QQL0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_046771 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.2e-38
Identity = 105/215 (48.84%), Postives = 140/215 (65.12%), Query Frame = 1 

Query: 1   MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFM--F 60
           M + S V  K+LWNVL+ T   M RKGL+SKR+ IMDMNLM+K+GK+ RKSM+N+    +
Sbjct: 1   MEVHSPVIAKKLWNVLRITFF-MIRKGLVSKRKLIMDMNLMMKKGKLLRKSMSNFMSSHY 60

Query: 61  HHHHHHSGGRDMTRGSFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINIPVEIKQ 120
           HHHHH+   + + RG + +Q+YEF  SN+P NPVF H+ KR  K+   FPC+N P     
Sbjct: 61  HHHHHNHDSKSLARG-YGMQEYEFSCSNSP-NPVFFHVPKR--KHHFNFPCMNTP----- 120

Query: 121 QEKKEEEEDSYPEAEAACTDACSYAL----SPAMVEG---SPLVTPFNVRISNYSSEEEN 180
               E  E+  P      T  C++ L    +     G   SPL++PF+VRISN+SSE+EN
Sbjct: 121 ----EVVEEPRPVVLVPMTPECTFNLRFDNASDFASGEMKSPLLSPFSVRISNFSSEDEN 180

Query: 181 DITCESGQVDNQAEEFIRRFYEQLKMQRSLQLLQY 207
           +    SGQVD+QAE+FIRRFYEQL+ Q  +QLLQY
Sbjct: 181 E-EGGSGQVDDQAEDFIRRFYEQLRTQSRMQLLQY 200

[Close]
BLAST of Cp4.1LG03g06400 vs. TAIR10
Match: AT1G52140.1 (AT1G52140.1 unknown protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-07
Identity = 61/207 (29.47%), Postives = 90/207 (43.48%), Query Frame = 1 

Query: 10  KRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHHHHHHSGGRD 69
           K+LWN+++  L+ M RKG +SK + I D N  +KRGK          MFH       G  
Sbjct: 9   KKLWNIVRF-LLYMIRKG-VSKNKLIADFNATLKRGK--------NLMFHQRRRVHAGST 68

Query: 70  MTRG-------SFDIQDYEFPWSNTP-INPVFSHMS-KRSTKYQTYFPCINIPV----EI 129
            +         +   Q+YEF  SNTP  +  FS+M+  R   +   F C   P     ++
Sbjct: 69  ASAALNATSATASSRQEYEFSCSNTPNYSFPFSNMAFMRKKSHNNLFTCGQTPQTLDDDV 128

Query: 130 KQQEKKEEEEDSYPEAEAACTDACSYALSPAM--VEGSPLVTPFNVRISNYSSEEENDIT 189
                  E  +   E         + ALSP       +PLV P  V  S +    EN   
Sbjct: 129 AAARAVLELLNGVGEKGNVTPADLTVALSPYFPGFGQTPLVRPLRVTDSPFPLTPENGDV 188

Query: 190 CESGQVDNQAEEFIRRFYEQLKMQRSL 202
             +G VD  A++FI++FY+ L  Q+ +
Sbjct: 189 A-NGHVDKAADDFIKKFYKNLNQQKKM 204

[Close]
BLAST of Cp4.1LG03g06400 vs. TAIR10
Match: AT5G38700.1 (AT5G38700.1 unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 2.6e-06
Identity = 59/208 (28.37%), Postives = 88/208 (42.31%), Query Frame = 1 

Query: 6   SVRVKRLWNVLKATLILMARKGLISKRRFIMDM-NLMVKRGKVFRKSMTNYFMFHHHHHH 65
           S+  +R W++++  L L  RKG I KR  + ++ NL  K  K            +HH+  
Sbjct: 10  SMATQRAWSLVRMAL-LWGRKGGIFKRWHMFELRNLFSKHLKAL----------NHHNSV 69

Query: 66  SGGRDMTRGSFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINIPVEIKQQEKKEE 125
              R +TR      + +  +  TPI  V  H   R T  +   PCI  P +     + + 
Sbjct: 70  DNNRYLTRYG----EKQLSFDETPIFNVKMH---RPTSMRFLLPCIARPADFDYDFELDG 129

Query: 126 EED------SYPEAEAACTDACSYALSPAMVEGSPLVTPFNVRISNYSSEEENDITCESG 185
            +D      SY   + +C + C                    R +N   EEE     E  
Sbjct: 130 TQDDTDDVRSYGYYDGSCNEKCD-------------------RSANDDQEEE-----EEK 175

Query: 186 QVDNQAEEFIRRFYEQLKMQRSLQLLQY 207
            VD +AEEFI +FYEQ+K+QR +  LQY
Sbjct: 190 GVDVRAEEFIAKFYEQMKLQRQISYLQY 175

[Close]
BLAST of Cp4.1LG03g06400 vs. NCBI nr
Match: gi|778680515|ref|XP_011651333.1| (PREDICTED: uncharacterized protein LOC105434869 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 1.6e-79
Identity = 166/226 (73.45%), Postives = 181/226 (80.09%), Query Frame = 1 

Query: 1   MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHH 60
           MGLQS VR KRLWNVLK TLILMARKGLISKRRFIMDMNLMVKRGK+FRKS+TNYFMFHH
Sbjct: 1   MGLQSCVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKLFRKSVTNYFMFHH 60

Query: 61  HHHHSGGRDMTRGSFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINIPVEI---- 120
           HH+HS  RDMTRG F IQDYEF  SNTPIN VFSHMSKR+TKYQ YFPCIN+PVEI    
Sbjct: 61  HHNHSSHRDMTRGVFGIQDYEFSCSNTPINSVFSHMSKRTTKYQAYFPCINLPVEIETRR 120

Query: 121 -KQQEKKEEEEDSYPEAEAAC--------------TDACSYALSPAMVEGSPLVTPFNVR 180
            +Q E +EEEEDSY EA+A                 + C++ALSPAM      V+PFNVR
Sbjct: 121 RQQDEDEEEEEDSYQEAKADSYLLMTPENTLSHLQYNGCTFALSPAM----EAVSPFNVR 180

Query: 181 ISNYSSEEENDITCESGQVDNQAEEFIRRFYEQLKMQRSLQLLQYN 208
           ISNYSSEEEN+I+ ESGQVDNQAEEFIRRFYEQLKMQ+ LQLLQYN
Sbjct: 181 ISNYSSEEENEISSESGQVDNQAEEFIRRFYEQLKMQKRLQLLQYN 222

[Close]
BLAST of Cp4.1LG03g06400 vs. NCBI nr
Match: gi|659098558|ref|XP_008450198.1| (PREDICTED: uncharacterized protein LOC103491858 [Cucumis melo])

HSP 1 Score: 304.3 bits (778), Expect = 1.6e-79
Identity = 167/230 (72.61%), Postives = 182/230 (79.13%), Query Frame = 1 

Query: 1   MGLQSSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHH 60
           MGLQS VR KRLWNVLK TLILMARKGLISKRRFIMDMNLMVKRGKVFRKS+TNYFMFHH
Sbjct: 1   MGLQSCVRAKRLWNVLKVTLILMARKGLISKRRFIMDMNLMVKRGKVFRKSVTNYFMFHH 60

Query: 61  HHHHSGGRDMTRGSFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINIPVEIK--- 120
           HH+HS  RDMT G F IQDYEF  SNTPIN VFSHMSKRSTKYQTYFPCIN+PVE++   
Sbjct: 61  HHNHSSHRDMTCGGFGIQDYEFSCSNTPINSVFSHMSKRSTKYQTYFPCINLPVEMETRR 120

Query: 121 -----QQEKKEEEEDSYPEAEAAC---------------TDACSYALSPAMVEGSPLVTP 180
                 +E++EEEEDSY EA+A                  + CS+ALSPAM      V+P
Sbjct: 121 QQQDDDEEEEEEEEDSYQEAKADSYLLMTPENTLNNHLQYNGCSFALSPAM----EAVSP 180

Query: 181 FNVRISNYSSEEENDITCESGQVDNQAEEFIRRFYEQLKMQRSLQLLQYN 208
           FNVRISNYSSEEEN+I+ ESGQVDNQAEEFIRRFYEQLKMQ+ LQLLQYN
Sbjct: 181 FNVRISNYSSEEENEISSESGQVDNQAEEFIRRFYEQLKMQKRLQLLQYN 226

[Close]
BLAST of Cp4.1LG03g06400 vs. NCBI nr
Match: gi|568829252|ref|XP_006468939.1| (PREDICTED: uncharacterized protein LOC102611730 [Citrus sinensis])

HSP 1 Score: 192.2 bits (487), Expect = 9.0e-46
Identity = 112/210 (53.33%), Postives = 145/210 (69.05%), Query Frame = 1 

Query: 5   SSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHHHHHH 64
           +SV  K+LWNV++ T   M RKGL+SKR+ +MDMNLM+KRGK+ RKS++N  M HHHHHH
Sbjct: 8   NSVIAKKLWNVVRITFF-MVRKGLVSKRKLLMDMNLMMKRGKLLRKSLSN-LMSHHHHHH 67

Query: 65  SGGRDMTRGSFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINIPVEIKQQEKKEE 124
              + +TRGSF IQ+YEF  SN+P NPVF H+SKR      YFPCIN P  I+++E++EE
Sbjct: 68  HHSKHVTRGSFGIQEYEFSCSNSP-NPVFFHVSKRK---HHYFPCINPPEVIEEEEEEEE 127

Query: 125 EEDSYPEAEAACTDACSYA---------LSPAMVEGSPLVTPFNVRISNYSSEEENDITC 184
           E +  P+A A       Y          L+P     SPL +PF+VR+SNYSSE+END   
Sbjct: 128 EYEVEPKAVALVPKTPEYTFNFRFDTADLAPGEKRSSPLRSPFSVRVSNYSSEDEND--T 187

Query: 185 ESGQVDNQAEEFIRRFYEQLKMQRSLQLLQ 206
            + QVD+ AE+FIRRFYEQL+ QR +QLLQ
Sbjct: 188 GNQQVDDDAEDFIRRFYEQLRSQRRMQLLQ 209

[Close]
BLAST of Cp4.1LG03g06400 vs. NCBI nr
Match: gi|802564838|ref|XP_012067402.1| (PREDICTED: uncharacterized protein LOC105630243 [Jatropha curcas])

HSP 1 Score: 186.0 bits (471), Expect = 6.5e-44
Identity = 112/207 (54.11%), Postives = 145/207 (70.05%), Query Frame = 1 

Query: 5   SSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHHHHHH 64
           +SV  KRLWNVL+ T   M RKGL+SKR+ IMDMNLM+KRGK+ RKS+TN  + HHHH+H
Sbjct: 10  NSVLAKRLWNVLRVTFF-MIRKGLVSKRKLIMDMNLMMKRGKLLRKSVTN--LLHHHHNH 69

Query: 65  SGGRDMTRGSFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINIPVEIKQQEKKEE 124
              R MTRG++ IQDYEF  SN+P NPVF H+SKR  K+  YFPCINIP  ++++E+ EE
Sbjct: 70  ---RHMTRGNYGIQDYEFSCSNSP-NPVFFHVSKR--KHHHYFPCINIPDVVEEEEEDEE 129

Query: 125 EEDSYPEA--EAACTDACSYALSPAMVEG---SPLVTPFNVRISNYSSEEENDITCESGQ 184
              +      + +  +  +Y  S     G   SP  +PF+VR+SNYSSEEE   +   GQ
Sbjct: 130 NNKAVMVMLPKNSPDNTFNYFHSDQFASGEKRSPSPSPFSVRVSNYSSEEEIVDSGNGGQ 189

Query: 185 VDNQAEEFIRRFYEQLKMQRSLQLLQY 207
           VD++AEEFIRRFYEQL++Q  +QLLQY
Sbjct: 190 VDHEAEEFIRRFYEQLRLQSRMQLLQY 207

[Close]
BLAST of Cp4.1LG03g06400 vs. NCBI nr
Match: gi|641844601|gb|KDO63494.1| (hypothetical protein CISIN_1g035841mg [Citrus sinensis])

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-43
Identity = 112/210 (53.33%), Postives = 142/210 (67.62%), Query Frame = 1 

Query: 5   SSVRVKRLWNVLKATLILMARKGLISKRRFIMDMNLMVKRGKVFRKSMTNYFMFHHHHHH 64
           +SV  KRLWNV++ T   M RKGL+SKR+ +MDMNLM+KRGK+ RKS++N  M HHHHHH
Sbjct: 8   NSVIAKRLWNVVRITFF-MVRKGLVSKRKLLMDMNLMMKRGKLLRKSLSN-LMSHHHHHH 67

Query: 65  SGGRDMTRGSFDIQDYEFPWSNTPINPVFSHMSKRSTKYQTYFPCINIPVEIKQQEKKEE 124
              + +TRGSF IQ+YEF  SN+P NPVF H+SKR      YFPCIN P  I+++E+ E 
Sbjct: 68  HHSKHVTRGSFGIQEYEFSCSNSP-NPVFFHVSKRK---HHYFPCINPPEVIEEEEEYEV 127

Query: 125 EEDSYPEAEAACTDACSYA---------LSPAMVEGSPLVTPFNVRISNYSSEEENDITC 184
           E    P+A A       Y          L+P     SPL +PF+VR+SNYSSE+END   
Sbjct: 128 E----PKAVALVPKTPEYTFNFRFDTADLAPGEKRSSPLRSPFSVRVSNYSSEDEND--T 187

Query: 185 ESGQVDNQAEEFIRRFYEQLKMQRSLQLLQ 206
            + QVD+ AE+FIRRFYEQL+ QR +QLLQ
Sbjct: 188 GNQQVDDDAEDFIRRFYEQLRSQRRMQLLQ 205

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g06400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g06400 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6S8_CUCSA1.1e-7973.45Uncharacterized protein OS=Cucumis sativus GN=Csa_3G251950 PE=4 SV=1[more]
A0A067F7W6_CITSI7.7e-4453.33Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035841mg PE=4 SV=1[more]
V4W2F5_9ROSI6.5e-4353.81Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016745mg PE=4 SV=1[more]
A9PEH7_POPTR3.3e-3949.28Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s13600g PE=2 SV=1[more]
A0A151QQL0_CAJCA2.2e-3848.84Uncharacterized protein OS=Cajanus cajan GN=KK1_046771 PE=4 SV=1[more]
BLAST of Cp4.1LG03g06400 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G52140.12.3e-0729.47 unknown protein[more]
AT5G38700.12.6e-0628.37 unknown protein[more]
BLAST of Cp4.1LG03g06400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680515|ref|XP_011651333.1|1.6e-7973.45PREDICTED: uncharacterized protein LOC105434869 [Cucumis sativus][more]
gi|659098558|ref|XP_008450198.1|1.6e-7972.61PREDICTED: uncharacterized protein LOC103491858 [Cucumis melo][more]
gi|568829252|ref|XP_006468939.1|9.0e-4653.33PREDICTED: uncharacterized protein LOC102611730 [Citrus sinensis][more]
gi|802564838|ref|XP_012067402.1|6.5e-4454.11PREDICTED: uncharacterized protein LOC105630243 [Jatropha curcas][more]
gi|641844601|gb|KDO63494.1|1.1e-4353.33hypothetical protein CISIN_1g035841mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008480DUF761_pln
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g06400.1Cp4.1LG03g06400.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 179..207
score: 1.8
NoneNo IPR availablePANTHERPTHR33265FAMILY NOT NAMEDcoord: 1..206
score: 6.5
NoneNo IPR availablePANTHERPTHR33265:SF6SUBFAMILY NOT NAMEDcoord: 1..206
score: 6.5