Cp4.1LG03g05760 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g05760
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG03 : 4567896 .. 4571526 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGAACCTCCTTGCTTCTGCATTTAAATCATCTCTGATTCACAAACCCACCTTCAAACCCACCTTCAAACCCACCATTGATCTTTCAATTTTGGAGTTTCATATGAAGCAATGTCAGAACATCAAGCAATTCGATCAAGTTCTATCTCAGATGCTTCTAACTGGGTTAATAAGAGACACTTACGCCGCAAGCAGACTAATCAAGTTCTCAACGGAATTTCCCTTCATTCACATCGATTACACCCTCCGAATCTTCAACCTGATTGAGAACACGAATTGCTTCATGTGGAATATGATGATGAGAGCTTATATTCAAAGAAACTCGCCGCATTTTGCTTTGAGTCTTTACAAATCGATGCTGTTCAAGTATCTGGAGGCTGATAATTACACTTACCCGCTTCTGATTCAGGCTTGTTCAATCCGTCGGTCAGAATGGGAAGGAAAACAGGTACATAATCATGTTATGAAGCTGGGTTTTGATTCAGATGTTTATGTTCAAAATACTTTGATTAATTTTTTTTCTGTTTGCTCGAAAATGAGTGATGCCCGCCGGGTGTTCGATGAAAGTTCTGTTTTGGATTCTGTGTCATGGAATTCAATTTTGGCTGGGTATGTTCAAATAGGGAATGTAGAGGAGGCTAAGTATATGTATGATCAAATGCCAGAGAAGAGTATAATTGCTTCGAATTCTATGATTGTTTTGTTTGGCAACAAAGGACTAGTGGTTGAAGCATGTAAACTGTTTGATGAAATGCCTGAGAGAGATATGGTAACATGGAGTGCATTAATTGCTTGCTATGAACAAAATGAGATGTTTGAGGAGGCTATGAGAACATTTGCAGGAATGCATAAATTTGGTGTAATGGTGGATGAAGTTGTAACAGTTAGTGCTCTTTCTGCTTGTGCAAACTTACTAATTGTCAATATGGGGAAATTGATCCACAGCTTGGCCTTGAAAATTGGAATTGAATCTTATATAAACCTTCAAAATGCTTTGATTCATATGTACTCGAAATTTGGGGATATAATGGTGGCACGAAAACTATTCGATGAAGCCTACTTGCTAGACTTGATATCTTGGAACTCTTTGATCTCCGGGTATTTGAAATGTGGTTTAGTTGAGAATGCCAAAACCATATTTGATTCCATGCCCAAGAAGGATGTTGTGTCTTGGAGTTCTATGATATCAGGATATGCACAACATGACCTTTTTTATGAGACACTCACACTTTTTCAGGAAATGCAATTGAACGGCTTCAGACCAGACGAGACCACGTTAGTAAGTGTGATATCTGCGTGCACTCGCTTGGCTGCCCTCGAGCAAGGGAAGTGGGTTCATGCTTACATAAAAAGGAACGGTCTCACTGTTAATGTTATTCTAGGTACAACTCTCATAGACATGTATATGAAGTGTGGATGTGTTGAAAGTGCCTTGGAGGTTTTCGACGGGATGGTTGAGAAAGGGGTTTCGACTTGGAATGCTCTAATTCTTGGGTTAGCTATGAACGGGTCGGTAGAAAGCTCGCTTGAGATGTTTTCTAATATGAAAAAAGGTCATGTAACACCTAATGAGATAACATTTGTGGGAGTACTTGGTGCTTGTCGACACATGGGTTTAGTAGATGAAGGGCGGCATCATTTTCATTCAATGATTTATGATCATAAGATAAAACCCAATGTTAAGCACTATGGGTGCATGGTTGATCTTCTAGGGCGTGCAGGTAAGCTTCAAGAAGCCGAGGAGCTTCTCAATCGTATGCCGATGACACCAGATGTTGCTACTTGGGGTGCCTTACTTGGGGCATGTAAGAAACATGGTGATAGTGAAATGGGAAGAAGGGTTGGGAGGAAGCTGATTGAGCTTCAACCTGATCATGACGGGTTCCACGTATTGCTATCGAACATATATGCTTCAAAAGGGAAATGGGACGATGTTCTTGAGATTAGGGGCATGATGACAAAACATAGAGTTTTAAAGACTCCTGGTTGTAGCATGATTGAAGCAAATGGAGTAGTTCACGAGTTTCTGGCTGGAGATAAAACGCACCCCGACATGGATGCAATTGAGGACATGTTAGGTCAAATGGCTATGAAATTAAAGCTAGAAGGTTATACACCTGATACAAATGAGGTTTTGCTTGATGTTGATGAAGAAGAGAAGGAGAGTACTCTGTTTAGACATAGTGAGAAGCTAGCCATTGCATTTGGCCTTATTAATATTAGTTCACCAACACCAATCAGGATAATTAAAAACTTGAGGATTTGTAATGACTGTCACACTGCTGCAAAACTAATCTCCAAGGCTTTTTGTCGTCAAATTGTGCTGAGAGATCGACATCGCTTTCATCACTTTGAACATGGAATTTGTTCGTGCAAGGATTACTGGTAGCTCATGAGGATTCGTTATACTTAAACAACTTGATTCTTTGAGATTATTTTGGCAGCACTTCTCTTGATCTTCACTGGACTGGTAACTCATTTGTCTCTTTGAGGTCTTGCAAGCCGCAGCTCACGAAGATGGTTTCGTTTCATATTTCCAAAGAGGGTGAACAGTTTGCTACAAACTCTACCATGGATGGTTATTGGTTCAAAGGCTGCAGCATGATTAGGACATAACGGGCAAGGATCGGCTGAAAATGACCGCCTCGAGGTATGCTTCTGCCCCGTTTATAATAAATATGAGAGCCTGTAGAGACATAGTATGGAGTATGAGTCTTACAAGATGATTGTAACGGCTCAAGCCCACCGCTAGCAAATATTGTTCTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACACAGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCATTCTCTTCCCCAACCGATGTGAGATCTCACAATCCACTCCCCTTCGGGGCCAGCGAGTCGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCTCTAACCGACGCATTATAAAATCTTGAGGAGAAGTCTAAAAAAGACAATATCTGCTAGGGATGGACCGTTACAACCATCTTACTCTAGGGTGGTATTTATTTTGTTCTTTAGGATTCAGTTCAAGTTTGGAACATCTGTTGTTGGGTTAGTCATTCACGACACAAAATCATATTATTAGATTCTTGGTGATCATGAGATATTATTGATATAGGCATTTTCAAAGCGGAATGGCTTTTATTATCAATCTGTAACTAAGTCCAAGTAAATAATTAATCTTAATCTTCTCTCTTGGATTTCAGACTTGAAGATGATGGTTCTCTACTTCCTGAACATAAACTAGGCCTTCAAGGCTACAAGAGTAGCTTCGGTTGTTTGTTTTCAACCGTAGTTGTTATTTTGGAACGCATACTTTCTCTCAATAAGGTCAAATTCGACTGTACACAAGACGGGTAATTCAAAGGAACATATGCTTTGAGGATGGATATCGATGTCGTATCCATCATATGCTCGTGTAAGATTGTACATAGTCTAGGTTGGGTTGGGCTGTTGAACTTTTTTGGATTAATTCAAAAGTTCAGGTTGGGTTAGGTTGGGTTGGGCTGTTGAACTTTTTTGGATTAATTCAAAAGTTCAGGTTGGGTTAGGTTG

mRNA sequence

TCGAACCTCCTTGCTTCTGCATTTAAATCATCTCTGATTCACAAACCCACCTTCAAACCCACCTTCAAACCCACCATTGATCTTTCAATTTTGGAGTTTCATATGAAGCAATGTCAGAACATCAAGCAATTCGATCAAGTTCTATCTCAGATGCTTCTAACTGGGTTAATAAGAGACACTTACGCCGCAAGCAGACTAATCAAGTTCTCAACGGAATTTCCCTTCATTCACATCGATTACACCCTCCGAATCTTCAACCTGATTGAGAACACGAATTGCTTCATGTGGAATATGATGATGAGAGCTTATATTCAAAGAAACTCGCCGCATTTTGCTTTGAGTCTTTACAAATCGATGCTGTTCAAGTATCTGGAGGCTGATAATTACACTTACCCGCTTCTGATTCAGGCTTGTTCAATCCGTCGGTCAGAATGGGAAGGAAAACAGGTACATAATCATGTTATGAAGCTGGGTTTTGATTCAGATGTTTATGTTCAAAATACTTTGATTAATTTTTTTTCTGTTTGCTCGAAAATGAGTGATGCCCGCCGGGTGTTCGATGAAAGTTCTGTTTTGGATTCTGTGTCATGGAATTCAATTTTGGCTGGGTATGTTCAAATAGGGAATGTAGAGGAGGCTAAGTATATGTATGATCAAATGCCAGAGAAGAGTATAATTGCTTCGAATTCTATGATTGTTTTGTTTGGCAACAAAGGACTAGTGGTTGAAGCATGTAAACTGTTTGATGAAATGCCTGAGAGAGATATGGTAACATGGAGTGCATTAATTGCTTGCTATGAACAAAATGAGATGTTTGAGGAGGCTATGAGAACATTTGCAGGAATGCATAAATTTGGTGTAATGGTGGATGAAGTTGTAACAGTTAGTGCTCTTTCTGCTTGTGCAAACTTACTAATTGTCAATATGGGGAAATTGATCCACAGCTTGGCCTTGAAAATTGGAATTGAATCTTATATAAACCTTCAAAATGCTTTGATTCATATACTTGAAGATGATGGTTCTCTACTTCCTGAACATAAACTAGGCCTTCAAGGCTACAAGAGTAGCTTCGGTTGTTTGTTTTCAACCGTAGTTGTTATTTTGGAACGCATACTTTCTCTCAATAAGGTCAAATTCGACTGTACACAAGACGGGTAATTCAAAGGAACATATGCTTTGAGGATGGATATCGATGTCGTATCCATCATATGCTCGTGTAAGATTGTACATAGTCTAGGTTGGGTTGGGCTGTTGAACTTTTTTGGATTAATTCAAAAGTTCAGGTTGGGTTAGGTTGGGTTGGGCTGTTGAACTTTTTTGGATTAATTCAAAAGTTCAGGTTGGGTTAGGTTG

Coding sequence (CDS)

TCGAACCTCCTTGCTTCTGCATTTAAATCATCTCTGATTCACAAACCCACCTTCAAACCCACCTTCAAACCCACCATTGATCTTTCAATTTTGGAGTTTCATATGAAGCAATGTCAGAACATCAAGCAATTCGATCAAGTTCTATCTCAGATGCTTCTAACTGGGTTAATAAGAGACACTTACGCCGCAAGCAGACTAATCAAGTTCTCAACGGAATTTCCCTTCATTCACATCGATTACACCCTCCGAATCTTCAACCTGATTGAGAACACGAATTGCTTCATGTGGAATATGATGATGAGAGCTTATATTCAAAGAAACTCGCCGCATTTTGCTTTGAGTCTTTACAAATCGATGCTGTTCAAGTATCTGGAGGCTGATAATTACACTTACCCGCTTCTGATTCAGGCTTGTTCAATCCGTCGGTCAGAATGGGAAGGAAAACAGGTACATAATCATGTTATGAAGCTGGGTTTTGATTCAGATGTTTATGTTCAAAATACTTTGATTAATTTTTTTTCTGTTTGCTCGAAAATGAGTGATGCCCGCCGGGTGTTCGATGAAAGTTCTGTTTTGGATTCTGTGTCATGGAATTCAATTTTGGCTGGGTATGTTCAAATAGGGAATGTAGAGGAGGCTAAGTATATGTATGATCAAATGCCAGAGAAGAGTATAATTGCTTCGAATTCTATGATTGTTTTGTTTGGCAACAAAGGACTAGTGGTTGAAGCATGTAAACTGTTTGATGAAATGCCTGAGAGAGATATGGTAACATGGAGTGCATTAATTGCTTGCTATGAACAAAATGAGATGTTTGAGGAGGCTATGAGAACATTTGCAGGAATGCATAAATTTGGTGTAATGGTGGATGAAGTTGTAACAGTTAGTGCTCTTTCTGCTTGTGCAAACTTACTAATTGTCAATATGGGGAAATTGATCCACAGCTTGGCCTTGAAAATTGGAATTGAATCTTATATAAACCTTCAAAATGCTTTGATTCATATACTTGAAGATGATGGTTCTCTACTTCCTGAACATAAACTAGGCCTTCAAGGCTACAAGAGTAGCTTCGGTTGTTTGTTTTCAACCGTAGTTGTTATTTTGGAACGCATACTTTCTCTCAATAAGGTCAAATTCGACTGTACACAAGACGGGTAA

Protein sequence

SNLLASAFKSSLIHKPTFKPTFKPTIDLSILEFHMKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCFMWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLINFFSVCSKMSDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAKYMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFEEAMRTFAGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSLLPEHKLGLQGYKSSFGCLFSTVVVILERILSLNKVKFDCTQDG
Homology
[Close]
BLAST of Cp4.1LG03g05760 vs. Swiss-Prot
Match: PP321_ARATH (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2)

HSP 1 Score: 181.0 bits (458), Expect = 2.4e-44
Identity = 112/339 (33.04%), Postives = 187/339 (55.16%), Query Frame = 1 

Query: 7   AFKSSLIHKPTFKP-TFKPTIDLSILEFHMKQCQNIKQFDQVLSQMLLTGLIRDTYAASR 66
           A+   L+ K   K  +   +  + IL F  ++ +++ +  Q  + ML TGL  DT++AS+
Sbjct: 18  AYNLRLLQKENLKKMSVCSSTPVPILSF-TERAKSLTEIQQAHAFMLKTGLFHDTFSASK 77

Query: 67  LIKFSTEFPFIH-IDYTLRIFNLIENTNCFMWNMMMRAYIQRNSPHFALSLYKSMLFKYL 126
           L+ F+   P    + Y   I N I + N F  N ++RAY   ++P  AL++++ ML   +
Sbjct: 78  LVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPV 137

Query: 127 EADNYTYPLLIQACSIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLINFFSVCSKMSDARR 186
             D Y++  +++AC+      EG+Q+H   +K G  +DV+V+NTL+N +        AR+
Sbjct: 138 FPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARK 197

Query: 187 VFDESSVLDSVSWNSILAGYVQIGNVEEAKYMYDQMPEKSIIASNSMIVLFGNKGLVVEA 246
           V D   V D+VSWNS+L+ Y++ G V+EA+ ++D+M E+++ + N MI  +   GLV EA
Sbjct: 198 VLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEA 257

Query: 247 CKLFDEMPERDMVTWSALIACYEQNEMFEEAMRTFAGMHKFGV-MVDEVVTVSALSACAN 306
            ++FD MP RD+V+W+A++  Y     + E +  F  M        D    VS LSACA+
Sbjct: 258 KEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACAS 317

Query: 307 LLIVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSL 343
           L  ++ G+ +H    K GIE    L  AL+ +    G +
Sbjct: 318 LGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKI 355

[Close]
BLAST of Cp4.1LG03g05760 vs. Swiss-Prot
Match: PPR15_ARATH (Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 8.1e-40
Identity = 92/308 (29.87%), Postives = 171/308 (55.52%), Query Frame = 1 

Query: 35  MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCF 94
           +KQC   K  +  L+ M+ T L +D    ++ I   T F    +D  +     ++  N F
Sbjct: 35  IKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFK--RLDLAVSTMTQMQEPNVF 94

Query: 95  MWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHV 154
           ++N + + ++  + P  +L LY  ML   +   +YTY  L++A S   +   G+ +  H+
Sbjct: 95  VYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF--ASRFGESLQAHI 154

Query: 155 MKLGFDSDVYVQNTLINFFSVCSKMSDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 214
            K GF   V +Q TLI+F+S   ++ +AR+VFDE    D ++W ++++ Y ++ +++ A 
Sbjct: 155 WKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSAN 214

Query: 215 YMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFEE 274
            + +QM EK+   SN +I  +   G + +A  LF++MP +D+++W+ +I  Y QN+ + E
Sbjct: 215 SLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYRE 274

Query: 275 AMRTFAGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALIH 334
           A+  F  M + G++ DEV   + +SACA+L ++ +GK +H   L+ G    + + +AL+ 
Sbjct: 275 AIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVD 334

Query: 335 ILEDDGSL 343
           +    GSL
Sbjct: 335 MYSKCGSL 338

[Close]
BLAST of Cp4.1LG03g05760 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.3e-39
Identity = 96/309 (31.07%), Postives = 160/309 (51.78%), Query Frame = 1 

Query: 35  MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFP-FIHIDYTLRIFNLIENTNC 94
           +  C+ ++    + +QM+  GL    YA S+LI+F    P F  + Y + +F  I+  N 
Sbjct: 40  LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99

Query: 95  FMWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNH 154
            +WN M R +   + P  AL LY  M+   L  ++YT+P ++++C+  ++  EG+Q+H H
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159

Query: 155 VMKLGFDSDVYVQNTLINFFSVCSKMSDARRVFDESSVLDSVSWNSILAGYVQIGNVEEA 214
           V+KLG D D+YV  +LI+ +    ++ DA +VFD+S   D VS+ +++ GY   G +E A
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219

Query: 215 KYMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFE 274
           +                               KLFDE+P +D+V+W+A+I+ Y +   ++
Sbjct: 220 Q-------------------------------KLFDEIPVKDVVSWNAMISGYAETGNYK 279

Query: 275 EAMRTFAGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALI 334
           EA+  F  M K  V  DE   V+ +SACA    + +G+ +H      G  S + + NALI
Sbjct: 280 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 317

Query: 335 HILEDDGSL 343
            +    G L
Sbjct: 340 DLYSKCGEL 317

[Close]
BLAST of Cp4.1LG03g05760 vs. Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.4e-36
Identity = 101/343 (29.45%), Postives = 181/343 (52.77%), Query Frame = 1 

Query: 35  MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCF 94
           + +C N+ Q  Q+ +Q++   L  D + A +LI  S        +  +R+FN ++  N  
Sbjct: 26  LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLI--SALSLCRQTNLAVRVFNQVQEPNVH 85

Query: 95  MWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHV 154
           + N ++RA+ Q + P+ A  ++  M    L ADN+TYP L++ACS +      K +HNH+
Sbjct: 86  LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHI 145

Query: 155 MKLGFDSDVYVQNTLINFFSVCSKMS--DARRVFDESSVLDSVSWNSILAGYVQIGNVEE 214
            KLG  SD+YV N LI+ +S C  +   DA ++F++ S  D+VSWNS+L G V+ G + +
Sbjct: 146 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD 205

Query: 215 AKYMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMF 274
           A+ ++D+MP++ +I+ N+M+  +     + +A +LF++MPER+ V+WS ++  Y +    
Sbjct: 206 ARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDM 265

Query: 275 EEAMRTF-----------------AGMHKFGV------MVDEVVTVSALSACANLL---- 334
           E A   F                 AG  + G+      +VD++V        A ++    
Sbjct: 266 EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 325

Query: 335 ------IVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSL 343
                 ++++G  IHS+  +  + S   + NAL+ +    G+L
Sbjct: 326 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNL 366

[Close]
BLAST of Cp4.1LG03g05760 vs. Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.1e-36
Identity = 92/304 (30.26%), Postives = 153/304 (50.33%), Query Frame = 1 

Query: 35  MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEF-----PFIHIDYTLRIFNLIE 94
           ++ C +      +   +L T LI D + ASRL+    +      P   + Y   IF+ I+
Sbjct: 19  LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78

Query: 95  NTNCFMWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQ 154
           N N F++N+++R +     P  A   Y  ML   +  DN T+P LI+A S       G+Q
Sbjct: 79  NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138

Query: 155 VHNHVMKLGFDSDVYVQNTLINFFSVCSKMSDARRVFDESSVLDSVSWNSILAGYVQIGN 214
            H+ +++ GF +DVYV+N+L++ ++ C  ++ A R+F +    D VSW S++AGY + G 
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGM 198

Query: 215 VEEAKYMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQN 274
           VE A+                               ++FDEMP R++ TWS +I  Y +N
Sbjct: 199 VENAR-------------------------------EMFDEMPHRNLFTWSIMINGYAKN 258

Query: 275 EMFEEAMRTFAGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQ 334
             FE+A+  F  M + GV+ +E V VS +S+CA+L  +  G+  +   +K  +   + L 
Sbjct: 259 NCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG 291

[Close]
BLAST of Cp4.1LG03g05760 vs. TrEMBL
Match: F6I4U4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00880 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.8e-118
Identity = 217/347 (62.54%), Postives = 276/347 (79.54%), Query Frame = 1 

Query: 2   NLLASAFKSSLIHKPTFKPTFKPTIDLSILEFHMKQCQNIKQFDQVLSQMLLTGLIRDTY 61
           N L+SA KS+  HKPTF    KPTI LSILE H+  C N+KQF+++LSQM+LTG I DT+
Sbjct: 7   NQLSSALKSTFNHKPTF----KPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTF 66

Query: 62  AASRLIKFSTEFPFIHIDYTLRIFNLIENTNCFMWNMMMRAYIQRNSPHFALSLYKSMLF 121
           AASRL+KFST+ PFI +DY+L+IF+ IEN+N FMWN MMRAYIQ NS   AL LYK M+ 
Sbjct: 67  AASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVK 126

Query: 122 KYLEADNYTYPLLIQACSIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLINFFSVCSKMSD 181
             +  DNYTYPL++QAC++R  E+ GK++H+HV+K+GFDSDVYVQNTLIN ++VC  M D
Sbjct: 127 NNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRD 186

Query: 182 ARRVFDESSVLDSVSWNSILAGYVQIGNVEEAKYMYDQMPEKSIIASNSMIVLFGNKGLV 241
           AR++FDES VLDSVSWNSILAGYV+ G+VEEAK ++DQMP+++I+ASNSMIVL G  G V
Sbjct: 187 ARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQV 246

Query: 242 VEACKLFDEMPERDMVTWSALIACYEQNEMFEEAMRTFAGMHKFGVMVDEVVTVSALSAC 301
           +EA KLF+EM E+DMV+WSALI+ YEQN M+EEA+  F  M+  G+ +DEVV VS LSAC
Sbjct: 247 MEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSAC 306

Query: 302 ANLLIVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSLLPEHKL 349
           A+L IV  GK+IH L +++GIESY+NLQNALIH+    G ++   KL
Sbjct: 307 AHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKL 349

[Close]
BLAST of Cp4.1LG03g05760 vs. TrEMBL
Match: A0A067GSH7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003746mg PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 5.3e-115
Identity = 217/346 (62.72%), Postives = 268/346 (77.46%), Query Frame = 1 

Query: 4   LASAFKSSLIHKPTFKPTFKPTIDLSILEFHMKQCQNIKQFDQVLSQMLLTGLIRDTYAA 63
           L+S  KSS+      KP FKPTI+LSILE H+++CQ+ KQF Q+LSQM+LTGLI DT+AA
Sbjct: 10  LSSTIKSSV----NAKPIFKPTINLSILETHLQKCQSFKQFTQILSQMILTGLIADTFAA 69

Query: 64  SRLIKFSTEF-PFIHIDYTLRIFNLIENTNCFMWNMMMRAYIQRNSPHFALSLYKSMLFK 123
           SRLIKFST+  PFI + Y+ +IF  +E+ N F++N MMRAYIQRN P  A+ LYK ML  
Sbjct: 70  SRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNN 129

Query: 124 YLEADNYTYPLLIQACSIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLINFFSVCSKMSDA 183
            +  DNYTYPLL QA ++R S +EGK +H+HV+K GFDSDVYV NTLIN ++VC  +S A
Sbjct: 130 NVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAA 189

Query: 184 RRVFDESSVLDSVSWNSILAGYVQIGNVEEAKYMYDQMPEKSIIASNSMIVLFGNKGLVV 243
           R++FDES VLD VSWNSILAGYV   NVEEAK++Y++MPE++IIASNSMIVLFG KG V 
Sbjct: 190 RKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVA 249

Query: 244 EACKLFDEMPERDMVTWSALIACYEQNEMFEEAMRTFAGMHKFGVMVDEVVTVSALSACA 303
           EAC+LF EMP++D+V+WSALI+CYEQNEM+EEA+  F  M    VMVDEVV VS LSACA
Sbjct: 250 EACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACA 309

Query: 304 NLLIVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSLLPEHKL 349
           NL +V  G  +H+LA+KIGIE YINLQNALIH+    G +    KL
Sbjct: 310 NLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKL 351

[Close]
BLAST of Cp4.1LG03g05760 vs. TrEMBL
Match: U5GCY0_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0005s01450g PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 5.3e-115
Identity = 210/347 (60.52%), Postives = 276/347 (79.54%), Query Frame = 1 

Query: 2   NLLASAFKSSLIHKPTFKPTFKPTIDLSILEFHMKQCQNIKQFDQVLSQMLLTGLIRDTY 61
           N L+  FK      PTF  T KPT+ L ILE H+++CQNIKQF+Q+LSQM+L+G  +D++
Sbjct: 2   NYLSKPFKI-----PTF--TLKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSF 61

Query: 62  AASRLIKFSTEFPFIHIDYTLRIFNLIENTNCFMWNMMMRAYIQRNSPHFALSLYKSMLF 121
           AASRL+KFSTE PFI+I+ + +IF+ IEN N F+ N MM+ Y+QRNSP  A+ +YK ML 
Sbjct: 62  AASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLE 121

Query: 122 KYLEADNYTYPLLIQACSIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLINFFSVCSKMSD 181
             + ADNYTYP+L Q+CSIR +E++GK + +HV+K+GFDSDVY+QNTLIN ++VC  +SD
Sbjct: 122 SNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSD 181

Query: 182 ARRVFDESSVLDSVSWNSILAGYVQIGNVEEAKYMYDQMPEKSIIASNSMIVLFGNKGLV 241
           AR+VFD SSVLD VSWNS+LAGYV +GNVEEAK +YD+MPE+++IASNSMIVLFG KG V
Sbjct: 182 ARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNV 241

Query: 242 VEACKLFDEMPERDMVTWSALIACYEQNEMFEEAMRTFAGMHKFGVMVDEVVTVSALSAC 301
            EACKLF+EM ++D+V+WSALI+CYEQNEM+EEA+  F  M+  G+MVDEVV +S LSAC
Sbjct: 242 EEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSAC 301

Query: 302 ANLLIVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSLLPEHKL 349
           + LL+V  GKL+H L +K+GIE+Y+NLQNALIH+      ++   KL
Sbjct: 302 SRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKL 341

[Close]
BLAST of Cp4.1LG03g05760 vs. TrEMBL
Match: W9S8C8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004944 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-112
Identity = 201/298 (67.45%), Postives = 247/298 (82.89%), Query Frame = 1 

Query: 51  MLLTGLIRDTYAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCFMWNMMMRAYIQRNSPH 110
           M+LTG I+DT+AASRL+KFST+FPF+HIDY+  IFNLIEN+N F+WN MMRAY+QRN P 
Sbjct: 1   MILTGFIKDTFAASRLLKFSTDFPFVHIDYSFHIFNLIENSNGFIWNTMMRAYVQRNCPQ 60

Query: 111 FALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLI 170
            A+ L+K ML + +  DNYTYP+LI AC+IR SE EGKQ+H+HV K+GFDSDVYV NTLI
Sbjct: 61  KAVYLFKCMLEENVGPDNYTYPILIHACAIRLSENEGKQIHSHVFKVGFDSDVYVHNTLI 120

Query: 171 NFFSVCSKMSDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAKYMYDQMPEKSIIASNS 230
           N ++VC  M DAR++FDES  LDSV+WNSIL GYVQ  +VEEAKY+YD+MPE++IIASNS
Sbjct: 121 NMYAVCQNMIDARKLFDESPCLDSVTWNSILGGYVQNRDVEEAKYIYDRMPERNIIASNS 180

Query: 231 MIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFEEAMRTFAGMHKFGVMVD 290
           MIVLFG +G V EAC+LFDEMPE+DMV+WSALI+CYEQNEM+EEA+  F  M   GV VD
Sbjct: 181 MIVLFGKEGQVTEACRLFDEMPEKDMVSWSALISCYEQNEMYEEALAIFVKMISKGVKVD 240

Query: 291 EVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSLLPEHKL 349
           EVV ++ALSACA+LL+V MGKLIHSL LKIG+E+Y+NLQNALIH+    G ++    L
Sbjct: 241 EVVVITALSACAHLLVVLMGKLIHSLVLKIGLETYLNLQNALIHMYSTYGDIMAAKNL 298

[Close]
BLAST of Cp4.1LG03g05760 vs. TrEMBL
Match: M5W5Y2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017672mg PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 6.1e-111
Identity = 200/298 (67.11%), Postives = 243/298 (81.54%), Query Frame = 1 

Query: 51  MLLTGLIRDTYAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCFMWNMMMRAYIQRNSPH 110
           M+LTG IRDTYAASR++KFST+  FIHID +LRIFNLIE+ N F+WN MMRAYIQRN P 
Sbjct: 1   MILTGFIRDTYAASRILKFSTDSSFIHIDLSLRIFNLIEDANGFIWNTMMRAYIQRNCPQ 60

Query: 111 FALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLI 170
            AL+LYK M+ K  E DNYTYPLL+QAC+IR SE+EG+Q+HNH++K GFDSDVYVQNTLI
Sbjct: 61  KALNLYKLMVDKNAEPDNYTYPLLVQACAIRVSEFEGRQIHNHILKTGFDSDVYVQNTLI 120

Query: 171 NFFSVCSKMSDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAKYMYDQMPEKSIIASNS 230
           N ++VC  MSDAR +FDE  VL+ VSWNSILAGYV+ G+ E+AK +YD+MPE++ IASNS
Sbjct: 121 NIYAVCENMSDARNLFDEIPVLNPVSWNSILAGYVRAGDAEKAKLIYDRMPERNTIASNS 180

Query: 231 MIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFEEAMRTFAGMHKFGVMVD 290
           MIVLFG  G V EAC+LF+E+PE+DMV+WSALI+CYEQNEM+EEA+  F  M   GVMVD
Sbjct: 181 MIVLFGRTGCVTEACRLFNELPEKDMVSWSALISCYEQNEMYEEALALFLRMVANGVMVD 240

Query: 291 EVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSLLPEHKL 349
           EVV V+ LSACA L IV+ GKLIH L +KIGIE+Y+NLQNA IH+    G ++   KL
Sbjct: 241 EVVVVTVLSACARLSIVHTGKLIHGLVVKIGIEAYVNLQNAFIHMYSSCGEIMAAQKL 298

[Close]
BLAST of Cp4.1LG03g05760 vs. TAIR10
Match: AT4G18840.1 (AT4G18840.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-45
Identity = 112/339 (33.04%), Postives = 187/339 (55.16%), Query Frame = 1 

Query: 7   AFKSSLIHKPTFKP-TFKPTIDLSILEFHMKQCQNIKQFDQVLSQMLLTGLIRDTYAASR 66
           A+   L+ K   K  +   +  + IL F  ++ +++ +  Q  + ML TGL  DT++AS+
Sbjct: 18  AYNLRLLQKENLKKMSVCSSTPVPILSF-TERAKSLTEIQQAHAFMLKTGLFHDTFSASK 77

Query: 67  LIKFSTEFPFIH-IDYTLRIFNLIENTNCFMWNMMMRAYIQRNSPHFALSLYKSMLFKYL 126
           L+ F+   P    + Y   I N I + N F  N ++RAY   ++P  AL++++ ML   +
Sbjct: 78  LVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPV 137

Query: 127 EADNYTYPLLIQACSIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLINFFSVCSKMSDARR 186
             D Y++  +++AC+      EG+Q+H   +K G  +DV+V+NTL+N +        AR+
Sbjct: 138 FPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARK 197

Query: 187 VFDESSVLDSVSWNSILAGYVQIGNVEEAKYMYDQMPEKSIIASNSMIVLFGNKGLVVEA 246
           V D   V D+VSWNS+L+ Y++ G V+EA+ ++D+M E+++ + N MI  +   GLV EA
Sbjct: 198 VLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEA 257

Query: 247 CKLFDEMPERDMVTWSALIACYEQNEMFEEAMRTFAGMHKFGV-MVDEVVTVSALSACAN 306
            ++FD MP RD+V+W+A++  Y     + E +  F  M        D    VS LSACA+
Sbjct: 258 KEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACAS 317

Query: 307 LLIVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSL 343
           L  ++ G+ +H    K GIE    L  AL+ +    G +
Sbjct: 318 LGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKI 355

[Close]
BLAST of Cp4.1LG03g05760 vs. TAIR10
Match: AT1G06150.1 (AT1G06150.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 166.0 bits (419), Expect = 4.5e-41
Identity = 92/308 (29.87%), Postives = 171/308 (55.52%), Query Frame = 1 

Query: 35   MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCF 94
            +KQC   K  +  L+ M+ T L +D    ++ I   T F    +D  +     ++  N F
Sbjct: 780  IKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFK--RLDLAVSTMTQMQEPNVF 839

Query: 95   MWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHV 154
            ++N + + ++  + P  +L LY  ML   +   +YTY  L++A S   +   G+ +  H+
Sbjct: 840  VYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF--ASRFGESLQAHI 899

Query: 155  MKLGFDSDVYVQNTLINFFSVCSKMSDARRVFDESSVLDSVSWNSILAGYVQIGNVEEAK 214
             K GF   V +Q TLI+F+S   ++ +AR+VFDE    D ++W ++++ Y ++ +++ A 
Sbjct: 900  WKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSAN 959

Query: 215  YMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFEE 274
             + +QM EK+   SN +I  +   G + +A  LF++MP +D+++W+ +I  Y QN+ + E
Sbjct: 960  SLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYRE 1019

Query: 275  AMRTFAGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALIH 334
            A+  F  M + G++ DEV   + +SACA+L ++ +GK +H   L+ G    + + +AL+ 
Sbjct: 1020 AIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVD 1079

Query: 335  ILEDDGSL 343
            +    GSL
Sbjct: 1080 MYSKCGSL 1083

[Close]
BLAST of Cp4.1LG03g05760 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-40
Identity = 96/309 (31.07%), Postives = 160/309 (51.78%), Query Frame = 1 

Query: 35  MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFP-FIHIDYTLRIFNLIENTNC 94
           +  C+ ++    + +QM+  GL    YA S+LI+F    P F  + Y + +F  I+  N 
Sbjct: 40  LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99

Query: 95  FMWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNH 154
            +WN M R +   + P  AL LY  M+   L  ++YT+P ++++C+  ++  EG+Q+H H
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159

Query: 155 VMKLGFDSDVYVQNTLINFFSVCSKMSDARRVFDESSVLDSVSWNSILAGYVQIGNVEEA 214
           V+KLG D D+YV  +LI+ +    ++ DA +VFD+S   D VS+ +++ GY   G +E A
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219

Query: 215 KYMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMFE 274
           +                               KLFDE+P +D+V+W+A+I+ Y +   ++
Sbjct: 220 Q-------------------------------KLFDEIPVKDVVSWNAMISGYAETGNYK 279

Query: 275 EAMRTFAGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQNALI 334
           EA+  F  M K  V  DE   V+ +SACA    + +G+ +H      G  S + + NALI
Sbjct: 280 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 317

Query: 335 HILEDDGSL 343
            +    G L
Sbjct: 340 DLYSKCGEL 317

[Close]
BLAST of Cp4.1LG03g05760 vs. TAIR10
Match: AT3G29230.1 (AT3G29230.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 153.3 bits (386), Expect = 3.1e-37
Identity = 101/343 (29.45%), Postives = 181/343 (52.77%), Query Frame = 1 

Query: 35  MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCF 94
           + +C N+ Q  Q+ +Q++   L  D + A +LI  S        +  +R+FN ++  N  
Sbjct: 26  LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLI--SALSLCRQTNLAVRVFNQVQEPNVH 85

Query: 95  MWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHV 154
           + N ++RA+ Q + P+ A  ++  M    L ADN+TYP L++ACS +      K +HNH+
Sbjct: 86  LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHI 145

Query: 155 MKLGFDSDVYVQNTLINFFSVCSKMS--DARRVFDESSVLDSVSWNSILAGYVQIGNVEE 214
            KLG  SD+YV N LI+ +S C  +   DA ++F++ S  D+VSWNS+L G V+ G + +
Sbjct: 146 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD 205

Query: 215 AKYMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQNEMF 274
           A+ ++D+MP++ +I+ N+M+  +     + +A +LF++MPER+ V+WS ++  Y +    
Sbjct: 206 ARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDM 265

Query: 275 EEAMRTF-----------------AGMHKFGV------MVDEVVTVSALSACANLL---- 334
           E A   F                 AG  + G+      +VD++V        A ++    
Sbjct: 266 EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 325

Query: 335 ------IVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSL 343
                 ++++G  IHS+  +  + S   + NAL+ +    G+L
Sbjct: 326 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNL 366

[Close]
BLAST of Cp4.1LG03g05760 vs. TAIR10
Match: AT5G06540.1 (AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 152.9 bits (385), Expect = 4.0e-37
Identity = 92/304 (30.26%), Postives = 153/304 (50.33%), Query Frame = 1 

Query: 35  MKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEF-----PFIHIDYTLRIFNLIE 94
           ++ C +      +   +L T LI D + ASRL+    +      P   + Y   IF+ I+
Sbjct: 19  LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78

Query: 95  NTNCFMWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQACSIRRSEWEGKQ 154
           N N F++N+++R +     P  A   Y  ML   +  DN T+P LI+A S       G+Q
Sbjct: 79  NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138

Query: 155 VHNHVMKLGFDSDVYVQNTLINFFSVCSKMSDARRVFDESSVLDSVSWNSILAGYVQIGN 214
            H+ +++ GF +DVYV+N+L++ ++ C  ++ A R+F +    D VSW S++AGY + G 
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGM 198

Query: 215 VEEAKYMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVTWSALIACYEQN 274
           VE A+                               ++FDEMP R++ TWS +I  Y +N
Sbjct: 199 VENAR-------------------------------EMFDEMPHRNLFTWSIMINGYAKN 258

Query: 275 EMFEEAMRTFAGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLALKIGIESYINLQ 334
             FE+A+  F  M + GV+ +E V VS +S+CA+L  +  G+  +   +K  +   + L 
Sbjct: 259 NCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG 291

[Close]
BLAST of Cp4.1LG03g05760 vs. NCBI nr
Match: gi|778679874|ref|XP_011651205.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like isoform X1 [Cucumis sativus])

HSP 1 Score: 553.9 bits (1426), Expect = 2.2e-154
Identity = 279/353 (79.04%), Postives = 311/353 (88.10%), Query Frame = 1 

Query: 1   SNLLASAFKSSLIHKPTFKPTFKPTIDLSILEFHMKQCQNIKQFDQVLSQMLLTGLIRDT 60
           SN L+    SSLIHKP    TFKPTI+LSILEFH+ +CQ+I QF+Q+LSQMLLTG IR+T
Sbjct: 22  SNHLSYGRISSLIHKP----TFKPTINLSILEFHLNRCQHINQFNQILSQMLLTGFIRET 81

Query: 61  YAASRLIKFSTEFPFIHIDYTLRIFNLIENTNCFMWNMMMRAYIQRNSPHFALSLYKSML 120
           YAASRLIKFST FPFIHIDYT RIFN IENTNCFMWNMM+RAYIQ NSPHFA +LYKSML
Sbjct: 82  YAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSML 141

Query: 121 FKYLEADNYTYPLLIQACSIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLINFFSVCSKMS 180
             YL ADNYTYPLLIQACSIRRSEWE KQVHNHV+KLGFDSDVYV+NTLIN FSVCS M+
Sbjct: 142 SNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMT 201

Query: 181 DARRVFDESSVLDSVSWNSILAGYVQIGNVEEAKYMYDQMPEKSIIASNSMIVLFGNKGL 240
           DA RVF+ESSVLDSVSWNSILAGY++IGNVEEAK++Y QMPE+SIIASNSMIVLFG +GL
Sbjct: 202 DACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGL 261

Query: 241 VVEACKLFDEMPERDMVTWSALIACYEQNEMFEEAMRTFAGMHKFGVMVDEVVTVSALSA 300
           VVEACKLFDEM E+DMVTWSALIAC++QNEM+EEA+RTF GMHK GVMVDEVV VSALSA
Sbjct: 262 VVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSA 321

Query: 301 CANLLIVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSLLPEHKLGLQGY 354
           CANLL+VNMGKLIHSL+LKIG ESYINLQNALI++    G ++   KL  + Y
Sbjct: 322 CANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAY 370

[Close]
BLAST of Cp4.1LG03g05760 vs. NCBI nr
Match: gi|1009178940|ref|XP_015870808.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 449.5 bits (1155), Expect = 5.8e-123
Identity = 216/330 (65.45%), Postives = 273/330 (82.73%), Query Frame = 1 

Query: 19  KPTFKPTIDLSILEFHMKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFPFIHI 78
           KP +K TI+LS+LE H++QCQN K+F Q+LSQM+ TG I+DT+AASRL+KFST+ PFIH+
Sbjct: 29  KPIYKATINLSVLETHLQQCQNFKEFKQILSQMIFTGFIKDTFAASRLLKFSTDLPFIHV 88

Query: 79  DYTLRIFNLIENTNCFMWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQAC 138
           DY+ +IFNLIEN+N F+ N MM+AY+QRN P  A+S YK +L + L  DNYTYP+L+QAC
Sbjct: 89  DYSFQIFNLIENSNGFICNTMMKAYVQRNCPQKAISFYKFLLDRNLGPDNYTYPILVQAC 148

Query: 139 SIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLINFFSVCSKMSDARRVFDESSVLDSVSWN 198
           +IR S++EGKQ+HNHV K+GFDSDVYVQNTLIN ++VC  M+DAR+VFDES VLDSVSWN
Sbjct: 149 AIRLSQFEGKQMHNHVFKMGFDSDVYVQNTLINMYAVCENMADARKVFDESPVLDSVSWN 208

Query: 199 SILAGYVQIGNVEEAKYMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVT 258
           SILAGY+Q+ +VEEAK++Y  M EK+ IASNSMIVLFG  G+V EA +LF+EMPE+DMV+
Sbjct: 209 SILAGYIQMADVEEAKFIYYLMQEKNTIASNSMIVLFGKTGMVEEAHQLFNEMPEKDMVS 268

Query: 259 WSALIACYEQNEMFEEAMRTFAGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLAL 318
           WSALI+CYEQNEM+EEA+  F  M+  G+MVDEVV V+ LSACA+L  V +GKLIHSL +
Sbjct: 269 WSALISCYEQNEMYEEALDMFIEMNANGIMVDEVVVVTVLSACAHLSAVKVGKLIHSLVV 328

Query: 319 KIGIESYINLQNALIHILEDDGSLLPEHKL 349
           KIGIESY+NLQNALIH+    G ++    L
Sbjct: 329 KIGIESYVNLQNALIHMYSSSGEIISAQNL 358

[Close]
BLAST of Cp4.1LG03g05760 vs. NCBI nr
Match: gi|694419342|ref|XP_009337629.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Pyrus x bretschneideri])

HSP 1 Score: 431.0 bits (1107), Expect = 2.1e-117
Identity = 209/330 (63.33%), Postives = 264/330 (80.00%), Query Frame = 1 

Query: 19  KPTFKPTIDLSILEFHMKQCQNIKQFDQVLSQMLLTGLIRDTYAASRLIKFSTEFPFIHI 78
           KP  KP+I+LSILE H+ +C+N+KQF+ +LSQM+LTG I DTYAASR++KF T+   +H+
Sbjct: 20  KPMSKPSINLSILEAHLPKCRNLKQFNPILSQMILTGFINDTYAASRILKFCTDSHLVHV 79

Query: 79  DYTLRIFNLIENTNCFMWNMMMRAYIQRNSPHFALSLYKSMLFKYLEADNYTYPLLIQAC 138
           D++L+IF+ I++ N F+WN MMRAY+QRN P  AL LYK ML K    D+YTYPLL+QAC
Sbjct: 80  DFSLKIFDRIDDANGFIWNTMMRAYVQRNRPQKALKLYKLMLEKNAGPDHYTYPLLMQAC 139

Query: 139 SIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLINFFSVCSKMSDARRVFDESSVLDSVSWN 198
           +IR S +EGKQ+H HV + GFDSDVYVQNTLIN ++VC  M DAR++FDE  VL+SV+WN
Sbjct: 140 AIRVSGFEGKQIHGHVFRTGFDSDVYVQNTLINMYAVCDNMGDARKLFDEIPVLNSVAWN 199

Query: 199 SILAGYVQIGNVEEAKYMYDQMPEKSIIASNSMIVLFGNKGLVVEACKLFDEMPERDMVT 258
           SILAGYV+ G+VE+AK++YDQMPE++ IASNSMIVLFG  G V EAC+LF+EMPE+DMV+
Sbjct: 200 SILAGYVRAGDVEKAKFVYDQMPERNTIASNSMIVLFGRTGCVNEACRLFEEMPEKDMVS 259

Query: 259 WSALIACYEQNEMFEEAMRTFAGMHKFGVMVDEVVTVSALSACANLLIVNMGKLIHSLAL 318
           WSALI+CYEQNEM+EEA+  F  M    VMVDEVV V+ LSACANLL V  GKLIH L +
Sbjct: 260 WSALISCYEQNEMYEEALAKFLEMVANEVMVDEVVVVTVLSACANLLAVQTGKLIHGLVV 319

Query: 319 KIGIESYINLQNALIHILEDDGSLLPEHKL 349
           KIGIE+Y+NLQNA IH+    G ++   KL
Sbjct: 320 KIGIETYVNLQNAFIHMYSSCGEIMAAQKL 349

[Close]
BLAST of Cp4.1LG03g05760 vs. NCBI nr
Match: gi|641862943|gb|KDO81630.1| (hypothetical protein CISIN_1g003746mg [Citrus sinensis])

HSP 1 Score: 422.5 bits (1085), Expect = 7.6e-115
Identity = 217/346 (62.72%), Postives = 268/346 (77.46%), Query Frame = 1 

Query: 4   LASAFKSSLIHKPTFKPTFKPTIDLSILEFHMKQCQNIKQFDQVLSQMLLTGLIRDTYAA 63
           L+S  KSS+      KP FKPTI+LSILE H+++CQ+ KQF Q+LSQM+LTGLI DT+AA
Sbjct: 10  LSSTIKSSV----NAKPIFKPTINLSILETHLQKCQSFKQFTQILSQMILTGLIADTFAA 69

Query: 64  SRLIKFSTEF-PFIHIDYTLRIFNLIENTNCFMWNMMMRAYIQRNSPHFALSLYKSMLFK 123
           SRLIKFST+  PFI + Y+ +IF  +E+ N F++N MMRAYIQRN P  A+ LYK ML  
Sbjct: 70  SRLIKFSTDLLPFIEMSYSFKIFAFLESPNGFIFNTMMRAYIQRNVPQQAICLYKLMLNN 129

Query: 124 YLEADNYTYPLLIQACSIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLINFFSVCSKMSDA 183
            +  DNYTYPLL QA ++R S +EGK +H+HV+K GFDSDVYV NTLIN ++VC  +S A
Sbjct: 130 NVGVDNYTYPLLAQASALRLSVFEGKLIHDHVLKAGFDSDVYVNNTLINMYAVCGDLSAA 189

Query: 184 RRVFDESSVLDSVSWNSILAGYVQIGNVEEAKYMYDQMPEKSIIASNSMIVLFGNKGLVV 243
           R++FDES VLD VSWNSILAGYV   NVEEAK++Y++MPE++IIASNSMIVLFG KG V 
Sbjct: 190 RKLFDESPVLDLVSWNSILAGYVNADNVEEAKFIYNKMPERNIIASNSMIVLFGRKGNVA 249

Query: 244 EACKLFDEMPERDMVTWSALIACYEQNEMFEEAMRTFAGMHKFGVMVDEVVTVSALSACA 303
           EAC+LF EMP++D+V+WSALI+CYEQNEM+EEA+  F  M    VMVDEVV VS LSACA
Sbjct: 250 EACRLFKEMPKKDLVSWSALISCYEQNEMYEEALVLFMNMIDHRVMVDEVVVVSVLSACA 309

Query: 304 NLLIVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSLLPEHKL 349
           NL +V  G  +H+LA+KIGIE YINLQNALIH+    G +    KL
Sbjct: 310 NLTVVKAGTSVHALAVKIGIECYINLQNALIHMYSSCGEITTAEKL 351

[Close]
BLAST of Cp4.1LG03g05760 vs. NCBI nr
Match: gi|566168773|ref|XP_006382364.1| (hypothetical protein POPTR_0005s01450g, partial [Populus trichocarpa])

HSP 1 Score: 422.5 bits (1085), Expect = 7.6e-115
Identity = 210/347 (60.52%), Postives = 276/347 (79.54%), Query Frame = 1 

Query: 2   NLLASAFKSSLIHKPTFKPTFKPTIDLSILEFHMKQCQNIKQFDQVLSQMLLTGLIRDTY 61
           N L+  FK      PTF  T KPT+ L ILE H+++CQNIKQF+Q+LSQM+L+G  +D++
Sbjct: 2   NYLSKPFKI-----PTF--TLKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSF 61

Query: 62  AASRLIKFSTEFPFIHIDYTLRIFNLIENTNCFMWNMMMRAYIQRNSPHFALSLYKSMLF 121
           AASRL+KFSTE PFI+I+ + +IF+ IEN N F+ N MM+ Y+QRNSP  A+ +YK ML 
Sbjct: 62  AASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLE 121

Query: 122 KYLEADNYTYPLLIQACSIRRSEWEGKQVHNHVMKLGFDSDVYVQNTLINFFSVCSKMSD 181
             + ADNYTYP+L Q+CSIR +E++GK + +HV+K+GFDSDVY+QNTLIN ++VC  +SD
Sbjct: 122 SNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSD 181

Query: 182 ARRVFDESSVLDSVSWNSILAGYVQIGNVEEAKYMYDQMPEKSIIASNSMIVLFGNKGLV 241
           AR+VFD SSVLD VSWNS+LAGYV +GNVEEAK +YD+MPE+++IASNSMIVLFG KG V
Sbjct: 182 ARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNV 241

Query: 242 VEACKLFDEMPERDMVTWSALIACYEQNEMFEEAMRTFAGMHKFGVMVDEVVTVSALSAC 301
            EACKLF+EM ++D+V+WSALI+CYEQNEM+EEA+  F  M+  G+MVDEVV +S LSAC
Sbjct: 242 EEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSAC 301

Query: 302 ANLLIVNMGKLIHSLALKIGIESYINLQNALIHILEDDGSLLPEHKL 349
           + LL+V  GKL+H L +K+GIE+Y+NLQNALIH+      ++   KL
Sbjct: 302 SRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKL 341

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g05760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP321_ARATH2.4e-4433.04Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN... [more]
PPR15_ARATH8.1e-4029.87Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN... [more]
PPR21_ARATH2.3e-3931.07Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
PP261_ARATH5.4e-3629.45Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN... [more]
PP367_ARATH7.1e-3630.26Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN... [more]
BLAST of Cp4.1LG03g05760 vs. TrEMBL
Match NameE-valueIdentityDescription
F6I4U4_VITVI1.8e-11862.54Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00880 PE=4 SV=... [more]
A0A067GSH7_CITSI5.3e-11562.72Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003746mg PE=4 SV=1[more]
U5GCY0_POPTR5.3e-11560.52Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0005s01450g P... [more]
W9S8C8_9ROSA1.1e-11267.45Uncharacterized protein OS=Morus notabilis GN=L484_004944 PE=4 SV=1[more]
M5W5Y2_PRUPE6.1e-11167.11Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017672mg PE=4 SV=1[more]
BLAST of Cp4.1LG03g05760 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G18840.11.4e-4533.04 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT1G06150.14.5e-4129.87 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G08070.11.3e-4031.07 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G29230.13.1e-3729.45 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G06540.14.0e-3730.26 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Cp4.1LG03g05760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778679874|ref|XP_011651205.1|2.2e-15479.04PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like isoform X1... [more]
gi|1009178940|ref|XP_015870808.1|5.8e-12365.45PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-... [more]
gi|694419342|ref|XP_009337629.1|2.1e-11763.33PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Pyrus x b... [more]
gi|641862943|gb|KDO81630.1|7.6e-11562.72hypothetical protein CISIN_1g003746mg [Citrus sinensis][more]
gi|566168773|ref|XP_006382364.1|7.6e-11560.52hypothetical protein POPTR_0005s01450g, partial [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g05760.1Cp4.1LG03g05760.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 257..287
score: 2.0E-5coord: 229..255
score: 1.3E-4coord: 94..120
score: 0.0023coord: 195..224
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 257..290
score: 1.6E-5coord: 195..225
score: 1.6E-7coord: 95..120
score: 3.7E-4coord: 229..256
score: 9.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 92..126
score: 8.265coord: 255..289
score: 10.238coord: 229..254
score: 5.448coord: 162..192
score: 5.996coord: 193..227
score: 11.301coord: 127..161
score: 6
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 181..281
score: 6.9E-5coord: 96..117
score: 6.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 3..333
score: 4.4E
NoneNo IPR availablePANTHERPTHR24015:SF678SUBFAMILY NOT NAMEDcoord: 3..333
score: 4.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g05760CmaCh14G008600Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g05760CmoCh14G008750Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g05760Cla013154Watermelon (97103) v1cpewmB614
Cp4.1LG03g05760MELO3C020309Melon (DHL92) v3.5.1cpemeB586
Cp4.1LG03g05760ClCG05G010780Watermelon (Charleston Gray)cpewcgB560
Cp4.1LG03g05760Lsi05G002860Bottle gourd (USVL1VR-Ls)cpelsiB511
Cp4.1LG03g05760MELO3C020309.2Melon (DHL92) v3.6.1cpemedB694
Cp4.1LG03g05760Bhi01G001332Wax gourdcpewgoB0786
Cp4.1LG03g05760Carg24233Silver-seed gourdcarcpeB0257
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g05760Cucurbita pepo (Zucchini)cpecpeB449
Cp4.1LG03g05760Cucumber (Gy14) v1cgycpeB0243
Cp4.1LG03g05760Cucurbita maxima (Rimu)cmacpeB494
Cp4.1LG03g05760Cucurbita moschata (Rifu)cmocpeB453
Cp4.1LG03g05760Wild cucumber (PI 183967)cpecpiB605
Cp4.1LG03g05760Cucumber (Chinese Long) v2cpecuB603
Cp4.1LG03g05760Cucumber (Gy14) v2cgybcpeB401
Cp4.1LG03g05760Silver-seed gourdcarcpeB1073
Cp4.1LG03g05760Cucumber (Chinese Long) v3cpecucB0753