Cp4.1LG03g05270 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g05270
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	At2g25920/F17H15.5
Location	Cp4.1LG03 : 4963953 .. 4968281 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCTCCATCTCCATCAATGTCCTGCACTAAATGGGATGCTGCTCGCAGAGCAATGAAATTCCTACGCCGGTGGAAAATTCACACCCACCGCCGCTGCCGTCGCTCCTTTCCGGTGGATTTCTGTCACGTGTGGCGGTTCATCAAGCGACTCATTCACCCAACCCCAACGCCTCTCCGCCCATATTCTGCAGAGCGTCAATTCTCCTTCAATGACAACCCCATTGTTCACCTGAAATTGCATCGCCTTCCGCCGCCGTCGCCGCCGTGTGATTATGAAGCGGAGGAGGAAGAGGAAGAAGAAGGGATTGATTCGAAGGCGGAGAAGTTTATTAAAATGTTTTACGAGGAAATGAGGTTGCAGAGTCAGGTGTCGTATTTGCCGTTGGATTGGTTTTCTGACGCTGATGAGTCACCGTCGGATCAATATTTTGTTTTATCTTAACTATTTATTAGTTATATTTTAATTAATTTTTAATATTACTTTTAATGAATGTTTTCGGAAGAATGTATTTAAATAATACTAATTTCAATTTTGAAATAAAATAAAAGAAAAGCGGTTTTTGGGAAAGCTCCAAACAGGGCCCCGAAAAGGAAAAACCAAAGAAGAGCGTACTATTATCCTTCTTCATCAACGATCCTAAACTGGTTGCGGTGATTCCAGTTTCCATAAATTGCCAACATTATCCTCTTTCTCAATCTAAATGATCGTCGATTTTGTACTTTTTCCTTCAATTTCTTGCTTGGAGAACTGTTGAAATTCCCCTGATGGGCGTTGAATCGAACTCCGCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGTCTTCTACGCCATCGCCGAGCGGGAAGAGGGCTAGAGATCCCGACGATGAAGTTTATCTCGACAATTTTCACTCTCACAAGCGCTACCTAAGTGAGGTACCCCTTGTGTGCCCTTAATTTATTGTTAGGGCATCTGAAACTTCTTTGCCTTAAGACATTTTGTTTTGATCCAGAAAAGCTATTGGTTTGTAGGTTGAACTTGAAATTTCAGCGTTTAGGGTATGAGTCTTTGTGGCATTTCTTAATTTGGGTCGATTATGCTCTTTCAGTTTTGCGTCATTCCTGTGTCTGCCTTTCTGGGTGCAAAATTCCCTCCTAACGTATATCCTTTCGTTGTTAATGATCTTGCACAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCTCTTTCAGAGAATCTCATGGATTCCCCTGCTAGGTCAGAGTCCATGCTTTATCTAAGGTAATGGAATTTGTTCCAATAAAGTTTAACTGATTTACTTTTAGATTGTCTTGTATACGAACGAGAATTTTAATACATAGAAGTTTACAAGCTCTTGTGCTGTATAAGATTACGGAAACAAATGGATGTTACTGGAAGGAATTGAAATTCTCCAATGTAACAAATCTTGTACTTTTGAAATGCGTCTGAAATGCCATTATGGGTCGGGATTTCTGAAACAAAATTCTCTTGATTCCTTTGCTTAGTATTCTCAAGATGTAGTTTTCCTAAAAAACTATGAATTTCCTTTACACTGCAAATAAAAAGTTACCGAGTTTATCCAGAAAGTTCGAATCTGACATTTAATTTCAAAATGTAATTGGCTCAACAAAACGCACAGTTCAAAACTTCGAAGTACCCTTCCCGGATTCTTGTAGGTAGAGGGTATCCTATCTACTTTACATGCCTATTGAATAAGCTTATCGTCGTTACCTATTGATGCTTGTGCTGTTATAACCAAGTAGTAATGATGCACTTGATAGTGTATCCTAGGAACGCGAAGTTTCATGGTTTTAATATGTGAGGGGTATGTACTTCACTTCAGGCAAAAGTTTGATAAATGTTGTTTGGTGTACCATCTTGGTTTGAACGGAGGAGTATTTAGTATTCTTTGTTAAAATCTGATGGCTGAAAAGATGAATAATGTCCACGAGGATGGTTTTCCCTGTTCTTATCTTCTGCCCCATCTTGGAGATTTAAAAATCTTGTCTGATTATTGTTATTTTTTCCTAGAATTGATCATTCATCCTTCTCTCTTAAGTTTAGCTTTGTGCAAATTGTATGTGATAAAGTACTTTCAAATCCTTGGTATGCATGTTAAAATTTTCTTCCACTAATTACATTATAAGAAGAATCTCTCTAGTACATGCGTACCACAACTTGCGTTCATGAGACTTCCAATTTCGTTTTTTTATGTGTTCTTAAGATTTAACGAGGATATAGATTTATCTTTTAAATTTTCATTATAAATCTTTCTGCTCCGTAGAGTTAACTCTACTTGTTTTTTCCTTTTATAATTCAACATTGTGGGATTGATTATTTAAACCCACCTTTAGAACAAGTGTGCAATGTCTTAACGAGTCGAAATATGCTTAAGTTGACATAGAACAAGTGTGCAATGCCTTCGCTTAAGTTGACATAGAACAAATGTGCAATGCCTTAACAAGTCGAAATATGCTTAAAGTTGACATAGAGTCAACTTTATGTCGTTGAAAGTATGTTAGTTTATCTTTATACTTATATAAGGCATAATATGAAACTTTGGTTGGAAAAGAGGTTTATGTTTCAATTTCTCTGTTATGGAAAATCGACTTATATCTCAGCTTGATTGAAATGTAAGGTTAGGGGACTTTTGTATTCCTTCTAATTGTTCAACAAATGGTAGTCTTATGTTCTACATTAAAAATGTTTTATTTCAAAGCTTAAGAGTATTGCTATTCATATTCATTTTTATTTACTCTTTAACAGTGTAAAAGGCCTTCAACTACATTATTTTGTTCTTTGTAAGCCGTATAAATAGTAGTTTATTTTATTTTAATTTTAAACAGTAGTTGGGAAGTGTAACGGAGGAGACTATGATGGACTGGGTTAAAACATTTATTATCTAAAATTGTGATCATCTTTAAAAGTTCGTTAAGTTTTCTAGATCACGAACGACATGCATATCTCTTCTTCTCATCTGTGTTCCACTGTCTAAACTAGTAGCGAAGAGATGCAGTATTCACCTATTCCAACTCTTCTGCAATTTTAGAGCCTCTTACTGCAATCCTTATTCTTTGGTTTAAAACTTTTTCCCTCATTGTATGTTTATTCCTTCCAGTTTGGCCAAATCACATGCATCTCGACTAATTCATTATGTAGAAAATCAATTTCCCACTGCCACCTAGAGCCATGTATTACATTTTGGGTCAGTGTCTCGTTTAATATTGTATGATCCTAAATGATGGTTTTGGGATTTTCCGATTTTAATCTTTTTTTCTTTTTTCTCTAACCCTACATCTCAGGGATGAAATGTCCTGCCAATATTCTCCTATGTCGGAAGATTCAGATGACTGCCGGTTTTGTGAGACATCCACAAACTTATTTCCCTCGCAGTCTGATAGTAGTGTACCTACCAGTCCAGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGATGACTCCTTCAACAGGTACCAATACTTCACTTGGATGTAATACTGGTCCCGTCACTAGCTTGCAGCCCCATCAACGCGGATCAGATTCTGAGGGTCGTTTCCCATCGTCTCCTAGTGATATATGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGCTCGGTGCAAATGAGAGCACAGCCTCATGGCCCATCATCTATGGAGTTGCCATATTGCTCCATGCCTGAACCTGGACCTAATATAGAAGCTGAAGAGCGGTCATGTTCTTTCATAAAATCGTTGGTTGATGAAAGAGTTTACCAACTCGGGGAATGCTCCTCAATGGGAGTGTCCGAACCTGAATATAACGAACAGAAATCATGCAAGGACTTGAACGGGGAAATGAAAGACAGTGAGTCTGGAGGGTAGTAGTAGTAAATGCTCAGCAGAGGAAAAATCTCTTCTAACATAACACATGGAACACATTGCTGGGTGGAACTGTGAAGTGTTTGTTTTTTGGTTCAACCTCCATGGAAATTCTCTTTTTGCATATGCTGCAAAATTGCTTTTGCTTGATTGAGTATGGTTTGGTCTTCTTCTAGGTCCTTTCCCGAGTGTGTGGTGCCTTGTGTGCTATTTTCATTGTCGAGCGAGCTGTTCTTATGAAGCTCGAGTCGAGAAGAGATGTTCATTGTCAAGCTTGTGTGAGAAACTCTGTCTATTTGATTCCTACTCGAGCTCGAGTCGAGAGAAGATGTCTGTCAGAGCTAATTTTCTAGATAAAATGCTGCTGCGGCTTTAGAGGTCACAAGATTGAAGCTGCCAGTGTCCCATTCGTTCCGTATTTATAACGCTGCTATTATTGTC

mRNA sequence

CCCTCTCCATCTCCATCAATGTCCTGCACTAAATGGGATGCTGCTCGCAGAGCAATGAAATTCCTACGCCGGTGGAAAATTCACACCCACCGCCGCTGCCGTCGCTCCTTTCCGGTGGATTTCTGTCACGTGTGGCGGTTCATCAAGCGACTCATTCACCCAACCCCAACGCCTCTCCGCCCATATTCTGCAGAGCGTCAATTCTCCTTCAATGACAACCCCATTGTTCACCTGAAATTGCATCGCCTTCCGCCGCCGTCGCCGCCGTGTGATTATGAAGCGGAGGAGGAAGAGGAAGAAGAAGGGATTGATTCGAAGGCGGAGAAGTTTATTAAAATGTTTTACGAGGAAATGAGGTTGCAGAGTCAGGTGTCGTATTTGCCGTTGGATTGGTTTTCTGACGCTGATGAGTCACCGTCGGATCAATATTTTGTTTTATCTTAACTATTTATTAGTTATATTTTAATTAATTTTTAATATTACTTTTAATGAATGTTTTCGGAAGAATGTATTTAAATAATACTAATTTCAATTTTGAAATAAAATAAAAGAAAAGCGGTTTTTGGGAAAGCTCCAAACAGGGCCCCGAAAAGGAAAAACCAAAGAAGAGCGTACTATTATCCTTCTTCATCAACGATCCTAAACTGGTTGCGGTGATTCCAGTTTCCATAAATTGCCAACATTATCCTCTTTCTCAATCTAAATGATCGTCGATTTTGTACTTTTTCCTTCAATTTCTTGCTTGGAGAACTGTTGAAATTCCCCTGATGGGCGTTGAATCGAACTCCGCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGTCTTCTACGCCATCGCCGAGCGGGAAGAGGGCTAGAGATCCCGACGATGAAGTTTATCTCGACAATTTTCACTCTCACAAGCGCTACCTAAGTGAGTTTTGCGTCATTCCTGTGTCTGCCTTTCTGGGTGCAAAATTCCCTCCTAACGTATATCCTTTCGTTGTTAATGATCTTGCACAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCTCTTTCAGAGAATCTCATGGATTCCCCTGCTAGGTCAGAGTCCATGCTTTATCTAAGAATTGATCATTCATCCTTCTCTCTTAAGTTTAGCTTTGTGCAAATTGTATGTGATAAAGTACTTTCAAATCCTTGGGATGAAATGTCCTGCCAATATTCTCCTATGTCGGAAGATTCAGATGACTGCCGGTTTTGTGAGACATCCACAAACTTATTTCCCTCGCAGTCTGATAGTAGTGTACCTACCAGTCCAGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGATGACTCCTTCAACAGGTACCAATACTTCACTTGGATGTAATACTGGTCCCGTCACTAGCTTGCAGCCCCATCAACGCGGATCAGATTCTGAGGGTCGTTTCCCATCGTCTCCTAGTGATATATGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGCTCGGTGCAAATGAGAGCACAGCCTCATGGCCCATCATCTATGGAGTTGCCATATTGCTCCATGCCTGAACCTGGACCTAATATAGAAGCTGAAGAGCGGTCATGTTCTTTCATAAAATCGTTGGTTGATGAAAGAGTTTACCAACTCGGGGAATGCTCCTCAATGGGAGTGTCCGAACCTGAATATAACGAACAGAAATCATGCAAGGACTTGAACGGGGAAATGAAAGACAGTGAGTCTGGAGGGTAGTAGTAGTAAATGCTCAGCAGAGGAAAAATCTCTTCTAACATAACACATGGAACACATTGCTGGGTGGAACTGTGAAGTGTTTGTTTTTTGGTTCAACCTCCATGGAAATTCTCTTTTTGCATATGCTGCAAAATTGCTTTTGCTTGATTGAGTATGGTTTGGTCTTCTTCTAGGTCCTTTCCCGAGTGTGTGGTGCCTTGTGTGCTATTTTCATTGTCGAGCGAGCTGTTCTTATGAAGCTCGAGTCGAGAAGAGATGTTCATTGTCAAGCTTGTGTGAGAAACTCTGTCTATTTGATTCCTACTCGAGCTCGAGTCGAGAGAAGATGTCTGTCAGAGCTAATTTTCTAGATAAAATGCTGCTGCGGCTTTAGAGGTCACAAGATTGAAGCTGCCAGTGTCCCATTCGTTCCGTATTTATAACGCTGCTATTATTGTC

Coding sequence (CDS)

ATGGGCGTTGAATCGAACTCCGCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGTCTTCTACGCCATCGCCGAGCGGGAAGAGGGCTAGAGATCCCGACGATGAAGTTTATCTCGACAATTTTCACTCTCACAAGCGCTACCTAAGTGAGTTTTGCGTCATTCCTGTGTCTGCCTTTCTGGGTGCAAAATTCCCTCCTAACGTATATCCTTTCGTTGTTAATGATCTTGCACAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCTCTTTCAGAGAATCTCATGGATTCCCCTGCTAGGTCAGAGTCCATGCTTTATCTAAGAATTGATCATTCATCCTTCTCTCTTAAGTTTAGCTTTGTGCAAATTGTATGTGATAAAGTACTTTCAAATCCTTGGGATGAAATGTCCTGCCAATATTCTCCTATGTCGGAAGATTCAGATGACTGCCGGTTTTGTGAGACATCCACAAACTTATTTCCCTCGCAGTCTGATAGTAGTGTACCTACCAGTCCAGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGATGACTCCTTCAACAGGTACCAATACTTCACTTGGATGTAATACTGGTCCCGTCACTAGCTTGCAGCCCCATCAACGCGGATCAGATTCTGAGGGTCGTTTCCCATCGTCTCCTAGTGATATATGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGCTCGGTGCAAATGAGAGCACAGCCTCATGGCCCATCATCTATGGAGTTGCCATATTGCTCCATGCCTGAACCTGGACCTAATATAGAAGCTGAAGAGCGGTCATGTTCTTTCATAAAATCGTTGGTTGATGAAAGAGTTTACCAACTCGGGGAATGCTCCTCAATGGGAGTGTCCGAACCTGAATATAACGAACAGAAATCATGCAAGGACTTGAACGGGGAAATGAAAGACAGTGAGTCTGGAGGGTAG

Protein sequence

MGVESNSAPPPPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSESMLYLRIDHSSFSLKFSFVQIVCDKVLSNPWDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKSCKDLNGEMKDSESGG

Homology

[Close]

BLAST of Cp4.1LG03g05270 vs. TrEMBL
Match: A0A0A0KWN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003080 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 5.0e-122
Identity = 251/330 (76.06%), Postives = 256/330 (77.58%), Query Frame = 1


Query: 1   MGVESNSAPPPPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEFCVIPV 60
           MGVESNSAPPPP       +SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSE      
Sbjct: 1   MGVESNSAPPPP-------TSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSE------ 60

Query: 61  SAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSESMLYLRIDHSS 120
                                 IMASSLNGLTVGDPLSENLMDSPARSESMLY R     
Sbjct: 61  ----------------------IMASSLNGLTVGDPLSENLMDSPARSESMLYQR----- 120

Query: 121 FSLKFSFVQIVCDKVLSNPWDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 180
                               DEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV
Sbjct: 121 --------------------DEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 180

Query: 181 SPYRYQRPFSGMTPSTGTNTSLGCNT-GPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 240
           SPYRYQRPFSG+ PSTGTNTSLGC+T  PVTSLQPHQRGSDSEGRFPSSPSDICHSADLR
Sbjct: 181 SPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 240

Query: 241 RAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSS 300
           RAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL ECSS
Sbjct: 241 RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS 270

Query: 301 M--GVSEPEYNEQKSCKDLNGEMKDSESGG 328
           M  GVSE EYNEQKSCKDLN +MKDS SGG
Sbjct: 301 MGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270

[Close]

BLAST of Cp4.1LG03g05270 vs. TrEMBL
Match: A0A067JWK8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14003 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.4e-84
Identity = 190/328 (57.93%), Postives = 212/328 (64.63%), Query Frame = 1


Query: 1   MGVESNSAPPPPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEFCVIPV 60
           MG +SNS PP             ST SP+GKR+RDP+DEVYLDN HSHKRYLSE      
Sbjct: 1   MGSDSNSTPP-------------STASPNGKRSRDPEDEVYLDNLHSHKRYLSE------ 60

Query: 61  SAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSESMLYLRIDHSS 120
                                 IMASSLNGLTVGDPLSENLM+SPARSE M Y R     
Sbjct: 61  ----------------------IMASSLNGLTVGDPLSENLMESPARSEGMFYAR----- 120

Query: 121 FSLKFSFVQIVCDKVLSNPWDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 180
                               DEMS QYSPMSEDS+D RFCET TN+  SQ DS +PTSPV
Sbjct: 121 --------------------DEMSLQYSPMSEDSEDSRFCETPTNICSSQPDS-LPTSPV 180

Query: 181 SPYRYQRPFSGMT--PSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 240
           SPYRYQRPF G +  PST +  + GC    VT  QP QRGSDSEGRFPSSPSDICHSADL
Sbjct: 181 SPYRYQRPFGGFSCAPSTSSYPAHGCTVNSVTCSQPRQRGSDSEGRFPSSPSDICHSADL 240

Query: 241 RRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECS 300
           RRAALLRSVQMR QP G SS ELP+ S  EP  N+EAEER CS++KSLVD+R YQ+ +CS
Sbjct: 241 RRAALLRSVQMRTQPLGSSSFELPFGSGQEPVSNMEAEERPCSYMKSLVDDRDYQIDDCS 261

Query: 301 SMGVSEPEYNEQKSCKDLNGEMKDSESG 327
           SM  SEPE+N  KSC+ LN  +K  E+G
Sbjct: 301 SMSASEPEFNGGKSCRVLNMNIKGDETG 261

[Close]

BLAST of Cp4.1LG03g05270 vs. TrEMBL
Match: B9RNH1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1347730 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 8.6e-82
Identity = 188/329 (57.14%), Postives = 209/329 (63.53%), Query Frame = 1


Query: 1   MGVESNSAPPPPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEFCVIPV 60
           MG +SNS P   PP       S+ST SP+GKR RDP+DEVYLDN HSHKRYLSE      
Sbjct: 1   MGSDSNSTPASTPP-------STSTASPNGKRNRDPEDEVYLDNLHSHKRYLSE------ 60

Query: 61  SAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSESMLYLRIDHSS 120
                                 IMASSLNGLTVGDP+ ENLM+SPARS+SM Y+      
Sbjct: 61  ----------------------IMASSLNGLTVGDPIPENLMESPARSDSMFYV------ 120

Query: 121 FSLKFSFVQIVCDKVLSNPWDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 180
                              WDEMS QYSPMSEDSDD RFCET      S    S+PTSPV
Sbjct: 121 -------------------WDEMSLQYSPMSEDSDDSRFCETGPINTCSSQPDSLPTSPV 180

Query: 181 SPYRYQRPFSGMT--PSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 240
           SPYRYQR F G +  PST +  + GC    V   QP QRGSDSEGRFPSSPSDICHSADL
Sbjct: 181 SPYRYQRSFGGFSSAPSTSSYPAHGCTVSSVACSQPRQRGSDSEGRFPSSPSDICHSADL 240

Query: 241 RRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECS 300
           RRAALLRSVQMR QP G SS ELP+ S  EP  NIEAEER CS++KSLVDER YQ+ E S
Sbjct: 241 RRAALLRSVQMRTQPPGSSSFELPFGSGQEPASNIEAEERPCSYMKSLVDERDYQIEEQS 269

Query: 301 SMGVSEPEYNEQKSCKDLNGEMKDSESGG 328
           SMG SEPE+N+ KSC+ LN  ++   SGG
Sbjct: 301 SMGSSEPEFNDGKSCRVLNMNIEGDGSGG 269

[Close]

BLAST of Cp4.1LG03g05270 vs. TrEMBL
Match: A0A061DZ09_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_004773 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.8e-79
Identity = 182/314 (57.96%), Postives = 206/314 (65.61%), Query Frame = 1


Query: 15  PPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEFCVIPVSAFLGAKFPPNVYP 74
           P   S++++ST SPS KR+RDP+DEVYLDN HSHKRYLSE                    
Sbjct: 3   PESSSATTTSTSSPSAKRSRDPEDEVYLDNLHSHKRYLSE-------------------- 62

Query: 75  FVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSESMLYLRIDHSSFSLKFSFVQIVCDK 134
                   IMASSLNGLTVGDPL ENLM+SPAR+E M Y                     
Sbjct: 63  --------IMASSLNGLTVGDPLPENLMESPARAEGMFY--------------------- 122

Query: 135 VLSNPWDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMT- 194
               P DEMS QYSPMSEDSDD RFCET  N   S SDS +PTSPVSPYRYQRP +G   
Sbjct: 123 ----PRDEMSWQYSPMSEDSDDSRFCETPMNTCLSHSDS-LPTSPVSPYRYQRPLNGFCS 182

Query: 195 -PSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ 254
            PST +  S G N   V S QP QRGSD+EGRFPSSPSDICHSADLRRAALLRSVQMRAQ
Sbjct: 183 PPSTSSYPSHG-NVSAVASSQPRQRGSDTEGRFPSSPSDICHSADLRRAALLRSVQMRAQ 242

Query: 255 PHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS 314
           P  PSS ELP+ S  E  PNIE EER CS++KSLVD+R YQ+ ECSS+G+SEPE+++  S
Sbjct: 243 PSAPSSFELPFGSGQENVPNIEVEERPCSYMKSLVDDREYQIEECSSLGISEPEFSQDDS 261

Query: 315 CKDLNGEMKDSESG 327
           C+  N  +K  ESG
Sbjct: 303 CRVSNMNLKGDESG 261

[Close]

BLAST of Cp4.1LG03g05270 vs. TrEMBL
Match: A9PA99_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 6.8e-79
Identity = 186/330 (56.36%), Postives = 218/330 (66.06%), Query Frame = 1


Query: 1   MGVESNSAPPPPPPPPPPSSSSSSTPS-PSGKRARDPDDEVYLDNFHSHKRYLSEFCVIP 60
           MG +SN+ P         +S+S+STPS P+GKR+RDP+DEVYLDN HSHKRYLSE     
Sbjct: 1   MGSDSNAVPSASASAS--TSTSTSTPSTPNGKRSRDPEDEVYLDNLHSHKRYLSE----- 60

Query: 61  VSAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSESMLYLRIDHS 120
                                  IMASSLNGLTVGDPL +NLM+SPARS++M + R    
Sbjct: 61  -----------------------IMASSLNGLTVGDPLQDNLMESPARSDTMFFAR---- 120

Query: 121 SFSLKFSFVQIVCDKVLSNPWDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 180
                                DEMS QYSPMSED DD RFCET  N    QS+S +P SP
Sbjct: 121 ---------------------DEMSLQYSPMSEDFDDSRFCETPINACSPQSES-LPGSP 180

Query: 181 VSPYRYQRPFSGMT--PSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSAD 240
           VSPYRYQRP  G +  P + + +S GC+   VTS QP QRGSDSEGRFPSSPSDICHSAD
Sbjct: 181 VSPYRYQRPLCGFSSAPYSSSFSSHGCS---VTSSQPRQRGSDSEGRFPSSPSDICHSAD 240

Query: 241 LRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGEC 300
           LRRAALLRSVQMR QP G SS ELP+ S  EPG N+EAEER CS++KSLV+ER Y L EC
Sbjct: 241 LRRAALLRSVQMRTQPTGSSSFELPFSSGHEPGSNMEAEERPCSYMKSLVEEREYPLEEC 271

Query: 301 SSMGVSEPEYNEQKSCKDLNGEMKDSESGG 328
           SSM +SEPE+NE+K+C+ LN  +K  +SGG
Sbjct: 301 SSMSISEPEFNEEKACRVLNMNIKGDDSGG 271

[Close]

BLAST of Cp4.1LG03g05270 vs. TAIR10
Match: AT2G25920.1 (AT2G25920.1 BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2))

HSP 1 Score: 199.1 bits (505), Expect = 4.1e-51
Identity = 146/315 (46.35%), Postives = 168/315 (53.33%), Query Frame = 1


Query: 15  PPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEFCVIPVSAFLGAKFPPNVYP 74
           PP P S SS    P GKR RDP+DEVYLDN  S KRYLSE                    
Sbjct: 30  PPVPISVSS----PCGKRTRDPEDEVYLDNLRSQKRYLSE-------------------- 89

Query: 75  FVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSESMLYLRIDHSSFSLKFSFVQIVCDK 134
                   IMA SLNGLTVGD L  N+++SPARSES LY R                   
Sbjct: 90  --------IMACSLNGLTVGDSLPVNMLESPARSESFLYHR------------------- 149

Query: 135 VLSNPWDEMSCQYSPMSEDSDDCRFCE--TSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM 194
                 D++S QYSPMSEDSD+ RFCE  T+T    S    S PTSPVSPYRYQRP +  
Sbjct: 150 ------DDLSLQYSPMSEDSDEARFCEDPTATASTSSSQPESRPTSPVSPYRYQRPLTST 209

Query: 195 TPSTGTNT----------SLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAA 254
                + T          S+  N    T+ Q  QRGSD+EGRFPSSPSDICHS DLRR A
Sbjct: 210 NSPQPSPTILHHSHTCPASMISNAATTTTPQSRQRGSDTEGRFPSSPSDICHSGDLRRTA 269

Query: 255 LLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGV 314
           LLRSVQMR QP G SS   P         NI+ EER CS  KS+ ++R Y  GE   +  
Sbjct: 270 LLRSVQMRTQPCGYSSSSGP--------SNIDGEERMCS--KSMEEDRGYNKGE--DIPY 274

Query: 315 SEPEYNEQKSCKDLN 318
           +E   ++ KSCK L+
Sbjct: 330 AEVS-SKSKSCKALD 274

[Close]

BLAST of Cp4.1LG03g05270 vs. NCBI nr
Match: gi|659108632|ref|XP_008454305.1| (PREDICTED: putative protein TPRXL isoform X1 [Cucumis melo])

HSP 1 Score: 449.5 bits (1155), Expect = 5.0e-123
Identity = 250/329 (75.99%), Postives = 257/329 (78.12%), Query Frame = 1


Query: 1   MGVESNSAPPPPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEFCVIPV 60
           MGVESNSAPPPPP      +SSSSTPSPSGKRARDP+DEVYLDNFHSHKRYLSE      
Sbjct: 1   MGVESNSAPPPPP------TSSSSTPSPSGKRARDPEDEVYLDNFHSHKRYLSE------ 60

Query: 61  SAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSESMLYLRIDHSS 120
                                 IMASSLNGLTVG+PLSENLMDSPARSESMLY R     
Sbjct: 61  ----------------------IMASSLNGLTVGEPLSENLMDSPARSESMLYQR----- 120

Query: 121 FSLKFSFVQIVCDKVLSNPWDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 180
                               DEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV
Sbjct: 121 --------------------DEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 180

Query: 181 SPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRR 240
           SPYRYQRPFSGM PS GTNTSLGC+T PVTSLQPHQRGSDSEGRFPSSPSDICHSADLRR
Sbjct: 181 SPYRYQRPFSGMAPSNGTNTSLGCSTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRR 240

Query: 241 AALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSM 300
           AALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL ECSSM
Sbjct: 241 AALLRSVQMRAQPAGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSSM 270

Query: 301 --GVSEPEYNEQKSCKDLNGEMKDSESGG 328
             GVSE EYNEQKSCKDLN +MKDS+SGG
Sbjct: 301 GLGVSESEYNEQKSCKDLNRDMKDSQSGG 270

[Close]

BLAST of Cp4.1LG03g05270 vs. NCBI nr
Match: gi|449469296|ref|XP_004152357.1| (PREDICTED: uncharacterized protein LOC101212915 isoform X1 [Cucumis sativus])

HSP 1 Score: 445.7 bits (1145), Expect = 7.2e-122
Identity = 251/330 (76.06%), Postives = 256/330 (77.58%), Query Frame = 1


Query: 1   MGVESNSAPPPPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEFCVIPV 60
           MGVESNSAPPPP       +SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSE      
Sbjct: 1   MGVESNSAPPPP-------TSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSE------ 60

Query: 61  SAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSESMLYLRIDHSS 120
                                 IMASSLNGLTVGDPLSENLMDSPARSESMLY R     
Sbjct: 61  ----------------------IMASSLNGLTVGDPLSENLMDSPARSESMLYQR----- 120

Query: 121 FSLKFSFVQIVCDKVLSNPWDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 180
                               DEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV
Sbjct: 121 --------------------DEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 180

Query: 181 SPYRYQRPFSGMTPSTGTNTSLGCNT-GPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 240
           SPYRYQRPFSG+ PSTGTNTSLGC+T  PVTSLQPHQRGSDSEGRFPSSPSDICHSADLR
Sbjct: 181 SPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 240

Query: 241 RAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSS 300
           RAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL ECSS
Sbjct: 241 RAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS 270

Query: 301 M--GVSEPEYNEQKSCKDLNGEMKDSESGG 328
           M  GVSE EYNEQKSCKDLN +MKDS SGG
Sbjct: 301 MGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270

[Close]

BLAST of Cp4.1LG03g05270 vs. NCBI nr
Match: gi|659108634|ref|XP_008454306.1| (PREDICTED: putative protein TPRXL isoform X2 [Cucumis melo])

HSP 1 Score: 374.8 bits (961), Expect = 1.6e-100
Identity = 221/330 (66.97%), Postives = 230/330 (69.70%), Query Frame = 1


Query: 1   MGVESNSAPPPPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEFCVIPV 60
           MGVESNSAPPPPP      +SSSSTPSPSGKRARDP+DEVYLDNFHSHKRYLSE      
Sbjct: 1   MGVESNSAPPPPP------TSSSSTPSPSGKRARDPEDEVYLDNFHSHKRYLSE------ 60

Query: 61  SAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSE-SMLYLRIDHS 120
                                 IMASSLNGLTVG+PLSENLMDSPAR E S  Y  +   
Sbjct: 61  ----------------------IMASSLNGLTVGEPLSENLMDSPARDEMSWQYSPMSED 120

Query: 121 SFSLKFSFVQIVCDKVLSNPWDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 180
           S   +F                E S    P   D                   SSVPTSP
Sbjct: 121 SDDCRFC---------------ETSTNLFPSQSD-------------------SSVPTSP 180

Query: 181 VSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 240
           VSPYRYQRPFSGM PS GTNTSLGC+T PVTSLQPHQRGSDSEGRFPSSPSDICHSADLR
Sbjct: 181 VSPYRYQRPFSGMAPSNGTNTSLGCSTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLR 240

Query: 241 RAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSS 300
           RAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL ECSS
Sbjct: 241 RAALLRSVQMRAQPAGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSS 262

Query: 301 M--GVSEPEYNEQKSCKDLNGEMKDSESGG 328
           M  GVSE EYNEQKSCKDLN +MKDS+SGG
Sbjct: 301 MGLGVSESEYNEQKSCKDLNRDMKDSQSGG 262

[Close]

BLAST of Cp4.1LG03g05270 vs. NCBI nr
Match: gi|778689395|ref|XP_011652951.1| (PREDICTED: uncharacterized protein LOC101212915 isoform X2 [Cucumis sativus])

HSP 1 Score: 370.9 bits (951), Expect = 2.2e-99
Identity = 222/331 (67.07%), Postives = 229/331 (69.18%), Query Frame = 1


Query: 1   MGVESNSAPPPPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEFCVIPV 60
           MGVESNSAPPPP       +SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSE      
Sbjct: 1   MGVESNSAPPPP-------TSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSE------ 60

Query: 61  SAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSE-SMLYLRIDHS 120
                                 IMASSLNGLTVGDPLSENLMDSPAR E S  Y  +   
Sbjct: 61  ----------------------IMASSLNGLTVGDPLSENLMDSPARDEMSWQYSPMSED 120

Query: 121 SFSLKFSFVQIVCDKVLSNPWDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSP 180
           S   +F                E S    P   D                   SSVPTSP
Sbjct: 121 SDDCRFC---------------ETSTNLFPSQSD-------------------SSVPTSP 180

Query: 181 VSPYRYQRPFSGMTPSTGTNTSLGCN-TGPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 240
           VSPYRYQRPFSG+ PSTGTNTSLGC+ T PVTSLQPHQRGSDSEGRFPSSPSDICHSADL
Sbjct: 181 VSPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 240

Query: 241 RRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECS 300
           RRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL ECS
Sbjct: 241 RRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECS 262

Query: 301 SM--GVSEPEYNEQKSCKDLNGEMKDSESGG 328
           SM  GVSE EYNEQKSCKDLN +MKDS SGG
Sbjct: 301 SMGLGVSESEYNEQKSCKDLNRDMKDSRSGG 262

[Close]

BLAST of Cp4.1LG03g05270 vs. NCBI nr
Match: gi|802689464|ref|XP_012082862.1| (PREDICTED: uncharacterized protein LOC105642597 [Jatropha curcas])

HSP 1 Score: 321.2 bits (822), Expect = 2.0e-84
Identity = 190/328 (57.93%), Postives = 212/328 (64.63%), Query Frame = 1


Query: 1   MGVESNSAPPPPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEFCVIPV 60
           MG +SNS PP             ST SP+GKR+RDP+DEVYLDN HSHKRYLSE      
Sbjct: 1   MGSDSNSTPP-------------STASPNGKRSRDPEDEVYLDNLHSHKRYLSE------ 60

Query: 61  SAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSESMLYLRIDHSS 120
                                 IMASSLNGLTVGDPLSENLM+SPARSE M Y R     
Sbjct: 61  ----------------------IMASSLNGLTVGDPLSENLMESPARSEGMFYAR----- 120

Query: 121 FSLKFSFVQIVCDKVLSNPWDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPV 180
                               DEMS QYSPMSEDS+D RFCET TN+  SQ DS +PTSPV
Sbjct: 121 --------------------DEMSLQYSPMSEDSEDSRFCETPTNICSSQPDS-LPTSPV 180

Query: 181 SPYRYQRPFSGMT--PSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADL 240
           SPYRYQRPF G +  PST +  + GC    VT  QP QRGSDSEGRFPSSPSDICHSADL
Sbjct: 181 SPYRYQRPFGGFSCAPSTSSYPAHGCTVNSVTCSQPRQRGSDSEGRFPSSPSDICHSADL 240

Query: 241 RRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECS 300
           RRAALLRSVQMR QP G SS ELP+ S  EP  N+EAEER CS++KSLVD+R YQ+ +CS
Sbjct: 241 RRAALLRSVQMRTQPLGSSSFELPFGSGQEPVSNMEAEERPCSYMKSLVDDRDYQIDDCS 261

Query: 301 SMGVSEPEYNEQKSCKDLNGEMKDSESG 327
           SM  SEPE+N  KSC+ LN  +K  E+G
Sbjct: 301 SMSASEPEFNGGKSCRVLNMNIKGDETG 261

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g05270 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG03g05270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWN0_CUCSA	5.0e-122	76.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003080 PE=4 SV=1	[more]
A0A067JWK8_JATCU	1.4e-84	57.93	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14003 PE=4 SV=1	[more]
B9RNH1_RICCO	8.6e-82	57.14	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1347730 PE=4 SV=1	[more]
A0A061DZ09_THECC	1.8e-79	57.96	Uncharacterized protein OS=Theobroma cacao GN=TCM_004773 PE=4 SV=1	[more]
A9PA99_POPTR	6.8e-79	56.36	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]

BLAST of Cp4.1LG03g05270 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25920.1	4.1e-51	46.35	BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain...	[more]

BLAST of Cp4.1LG03g05270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108632\|ref\|XP_008454305.1\|	5.0e-123	75.99	PREDICTED: putative protein TPRXL isoform X1 [Cucumis melo]	[more]
gi\|449469296\|ref\|XP_004152357.1\|	7.2e-122	76.06	PREDICTED: uncharacterized protein LOC101212915 isoform X1 [Cucumis sativus]	[more]
gi\|659108634\|ref\|XP_008454306.1\|	1.6e-100	66.97	PREDICTED: putative protein TPRXL isoform X2 [Cucumis melo]	[more]
gi\|778689395\|ref\|XP_011652951.1\|	2.2e-99	67.07	PREDICTED: uncharacterized protein LOC101212915 isoform X2 [Cucumis sativus]	[more]
gi\|802689464\|ref\|XP_012082862.1\|	2.0e-84	57.93	PREDICTED: uncharacterized protein LOC105642597 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g05270.1	Cp4.1LG03g05270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35717	FAMILY NOT NAMED	coord: 83..115 score: 3.5E-103coord: 14..54 score: 3.5E-103coord: 141..326 score: 3.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g05270	Cucsa.096810	Cucumber (Gy14) v1	cgycpeB0198
Cp4.1LG03g05270	CmaCh14G009240	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g05270	CmoCh14G009500	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g05270	Cla017376	Watermelon (97103) v1	cpewmB595
Cp4.1LG03g05270	Csa4G003080	Cucumber (Chinese Long) v2	cpecuB616
Cp4.1LG03g05270	ClCG10G011230	Watermelon (Charleston Gray)	cpewcgB544
Cp4.1LG03g05270	CSPI04G01140	Wild cucumber (PI 183967)	cpecpiB618
Cp4.1LG03g05270	Lsi03G011000	Bottle gourd (USVL1VR-Ls)	cpelsiB500
Cp4.1LG03g05270	MELO3C032866.2	Melon (DHL92) v3.6.1	cpemedB699
Cp4.1LG03g05270	CsaV3_4G001120	Cucumber (Chinese Long) v3	cpecucB0768
Cp4.1LG03g05270	Bhi11G001050	Wax gourd	cpewgoB0742
Cp4.1LG03g05270	CsGy4G001030	Cucumber (Gy14) v2	cgybcpeB553
Cp4.1LG03g05270	Carg11152	Silver-seed gourd	carcpeB1147

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g05270	Wax gourd	cpewgoB0819
Cp4.1LG03g05270	Cucurbita pepo (Zucchini)	cpecpeB336
Cp4.1LG03g05270	Cucurbita pepo (Zucchini)	cpecpeB449
Cp4.1LG03g05270	Cucurbita maxima (Rimu)	cmacpeB494
Cp4.1LG03g05270	Cucurbita moschata (Rifu)	cmocpeB453
Cp4.1LG03g05270	Melon (DHL92) v3.5.1	cpemeB589
Cp4.1LG03g05270	Cucumber (Gy14) v2	cgybcpeB396
Cp4.1LG03g05270	Silver-seed gourd	carcpeB1073
Cp4.1LG03g05270	Cucumber (Chinese Long) v3	cpecucB0748