Cp4.1LG03g04430 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g04430
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDNA-damage-repair/toleration DRT100-like protein
LocationCp4.1LG03 : 5547459 .. 5548019 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCTCGACCTCAGGAACAATCAAATTTCCGGCGAAGTTCCATCCGATTTTGGGAAATTAGAGATGCTGAGTCGAGCGCTTCTTAGCAGCAACCAACTCGGGGGATCGATTCCGGCTTCGGTTACGAAAATGAACCGCCTCGCAGATTTGGATTTGTCGATGAACGGTATCTCCGGCATGATTCCGGAGAATATGGGAAACATGCCGGTTTTGTCGACTCTGAATCTGGACAGCAACAGAATCTCAGGGCAAATACCTCCAACTCTGATCAGCAATGGCGGGCTAGGGATTCTGAATTTGAGCAGAAACGCTCTGGACGGGCAGATTCCGGACGTTTTCTGCCCGGGTTCATACTTCATGGCGCTCGACTTGTCGTTCAATGCCCTTAAAGGTCCGATACCAAATTCATTGTCGTCAGCCGAATACGTTGGGCATTTGAATCTGAGTCATAACCATCTTTGCGGGTCCATACCCATCGGGTCGCCCTTTGATCACCTCGAAGCGTCGTCGTTTTCCAACAATGACTGCCTCTGTGGGAACCCATTAAGCACTTGTTGA

mRNA sequence

ATGCATCTCGACCTCAGGAACAATCAAATTTCCGGCGAAGTTCCATCCGATTTTGGGAAATTAGAGATGCTGAGTCGAGCGCTTCTTAGCAGCAACCAACTCGGGGGATCGATTCCGGCTTCGGTTACGAAAATGAACCGCCTCGCAGATTTGGATTTGTCGATGAACGGTATCTCCGGCATGATTCCGGAGAATATGGGAAACATGCCGGTTTTGTCGACTCTGAATCTGGACAGCAACAGAATCTCAGGGCAAATACCTCCAACTCTGATCAGCAATGGCGGGCTAGGGATTCTGAATTTGAGCAGAAACGCTCTGGACGGGCAGATTCCGGACGTTTTCTGCCCGGGTTCATACTTCATGGCGCTCGACTTGTCGTTCAATGCCCTTAAAGGTCCGATACCAAATTCATTGTCGTCAGCCGAATACGTTGGGCATTTGAATCTGAGTCATAACCATCTTTGCGGGTCCATACCCATCGGGTCGCCCTTTGATCACCTCGAAGCGTCGTCGTTTTCCAACAATGACTGCCTCTGTGGGAACCCATTAAGCACTTGTTGA

Coding sequence (CDS)

ATGCATCTCGACCTCAGGAACAATCAAATTTCCGGCGAAGTTCCATCCGATTTTGGGAAATTAGAGATGCTGAGTCGAGCGCTTCTTAGCAGCAACCAACTCGGGGGATCGATTCCGGCTTCGGTTACGAAAATGAACCGCCTCGCAGATTTGGATTTGTCGATGAACGGTATCTCCGGCATGATTCCGGAGAATATGGGAAACATGCCGGTTTTGTCGACTCTGAATCTGGACAGCAACAGAATCTCAGGGCAAATACCTCCAACTCTGATCAGCAATGGCGGGCTAGGGATTCTGAATTTGAGCAGAAACGCTCTGGACGGGCAGATTCCGGACGTTTTCTGCCCGGGTTCATACTTCATGGCGCTCGACTTGTCGTTCAATGCCCTTAAAGGTCCGATACCAAATTCATTGTCGTCAGCCGAATACGTTGGGCATTTGAATCTGAGTCATAACCATCTTTGCGGGTCCATACCCATCGGGTCGCCCTTTGATCACCTCGAAGCGTCGTCGTTTTCCAACAATGACTGCCTCTGTGGGAACCCATTAAGCACTTGTTGA

Protein sequence

MHLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGMIPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFMALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCGNPLSTC
Homology
[Close]
BLAST of Cp4.1LG03g04430 vs. Swiss-Prot
Match: DR100_ARATH (DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2)

HSP 1 Score: 240.0 bits (611), Expect = 2.1e-62
Identity = 118/184 (64.13%), Postives = 144/184 (78.26%), Query Frame = 1 

Query: 2   HLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGM 61
           HL+L  N I+G +P+DFG L+MLSR LL  N+L GSIP S++ M RLADLDLS N I G 
Sbjct: 187 HLELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGP 246

Query: 62  IPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFM 121
           IPE MGNM VLS LNLD N ++G IP +L+SN GL + NLSRNAL+G IPDVF   +Y +
Sbjct: 247 IPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLV 306

Query: 122 ALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCGN 181
           +LDLS N+L G IP+SLSSA++VGHL++SHN LCG IP G PFDHLEA+SFS+N CLCG 
Sbjct: 307 SLDLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQCLCGG 366

Query: 182 PLST 186
           PL+T
Sbjct: 367 PLTT 370

[Close]
BLAST of Cp4.1LG03g04430 vs. Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 8.2e-30
Identity = 76/208 (36.54%), Postives = 112/208 (53.85%), Query Frame = 1 

Query: 2   HLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGM 61
           H+DL NN +SG +P+  GKL +L    LSSN+  GS+P  +  +  +  L L  N ++G 
Sbjct: 652 HIDLNNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGS 711

Query: 62  IPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIP-DVFCPGSYF 121
           IP+ +GN+  L+ LNL+ N++SG +P T+     L  L LSRNAL G+IP ++       
Sbjct: 712 IPQEIGNLQALNALNLEENQLSGPLPSTIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQ 771

Query: 122 MALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIP--------------------- 181
            ALDLS+N   G IP+++S+   +  L+LSHN L G +P                     
Sbjct: 772 SALDLSYNNFTGRIPSTISTLPKLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEG 831

Query: 182 -IGSPFDHLEASSFSNNDCLCGNPLSTC 187
            +   F   +A +F  N  LCG+PLS C
Sbjct: 832 KLKKQFSRWQADAFVGNAGLCGSPLSHC 859

[Close]
BLAST of Cp4.1LG03g04430 vs. Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.9e-29
Identity = 72/183 (39.34%), Postives = 105/183 (57.38%), Query Frame = 1 

Query: 3   LDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGMI 62
           LDL +N+++G +P   GK+E LS   L +N + G IP  +  +  L  L+L    + G +
Sbjct: 313 LDLESNKLNGSIPGSIGKMESLSVIRLGNNSIDGVIPRDIGSLEFLQVLNLHNLNLIGEV 372

Query: 63  PENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFMA 122
           PE++ N  VL  L++  N + G+I   L++   + IL+L RN L+G IP      S    
Sbjct: 373 PEDISNCRVLLELDVSGNDLEGKISKKLLNLTNIKILDLHRNRLNGSIPPELGNLSKVQF 432

Query: 123 LDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCGNP 182
           LDLS N+L GPIP+SL S   + H N+S+N+L G IP         +S+FSNN  LCG+P
Sbjct: 433 LDLSQNSLSGPIPSSLGSLNTLTHFNVSYNNLSGVIPPVPMIQAFGSSAFSNNPFLCGDP 492

Query: 183 LST 186
           L T
Sbjct: 493 LVT 495

[Close]
BLAST of Cp4.1LG03g04430 vs. Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.5e-28
Identity = 76/208 (36.54%), Postives = 105/208 (50.48%), Query Frame = 1 

Query: 2   HLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGM 61
           H+DL NN +SG +P   GKL  L    LSSNQ   S+P  +    +L  L L  N ++G 
Sbjct: 651 HIDLNNNFLSGPIPPWLGKLSQLGELKLSSNQFVESLPTELFNCTKLLVLSLDGNSLNGS 710

Query: 62  IPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIP-DVFCPGSYF 121
           IP+ +GN+  L+ LNLD N+ SG +P  +     L  L LSRN+L G+IP ++       
Sbjct: 711 IPQEIGNLGALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTGEIPVEIGQLQDLQ 770

Query: 122 MALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIP--------------------- 181
            ALDLS+N   G IP+++ +   +  L+LSHN L G +P                     
Sbjct: 771 SALDLSYNNFTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKSLGYLNVSFNNLGG 830

Query: 182 -IGSPFDHLEASSFSNNDCLCGNPLSTC 187
            +   F    A SF  N  LCG+PLS C
Sbjct: 831 KLKKQFSRWPADSFLGNTGLCGSPLSRC 858

[Close]
BLAST of Cp4.1LG03g04430 vs. Swiss-Prot
Match: IRK_ARATH (Probable LRR receptor-like serine/threonine-protein kinase IRK OS=Arabidopsis thaliana GN=IRK PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.8e-28
Identity = 70/178 (39.33%), Postives = 98/178 (55.06%), Query Frame = 1 

Query: 3   LDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGMI 62
           LDL +N  SGE+ +  G L  L    LS N L G IP+++ ++  L+ LD+S N ++GMI
Sbjct: 381 LDLSHNAFSGEIGAGLGDLRDLEGLHLSRNSLTGPIPSTIGELKHLSVLDVSHNQLNGMI 440

Query: 63  PENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFMA 122
           P   G    L  L L++N + G IP ++ +   L  L LS N L G IP      +    
Sbjct: 441 PRETGGAVSLEELRLENNLLEGNIPSSIKNCSSLRSLILSHNKLLGSIPPELAKLTRLEE 500

Query: 123 LDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCG 181
           +DLSFN L G +P  L++  Y+   N+SHNHL G +P G  F+ L  SS S N  +CG
Sbjct: 501 VDLSFNELAGTLPKQLANLGYLHTFNISHNHLFGELPAGGIFNGLSPSSVSGNPGICG 558

[Close]
BLAST of Cp4.1LG03g04430 vs. TrEMBL
Match: A0A0A0LCF0_CUCSA (Leucine rich repeat protein OS=Cucumis sativus GN=Csa_3G697970 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.3e-86
Identity = 158/184 (85.87%), Postives = 173/184 (94.02%), Query Frame = 1 

Query: 3   LDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGMI 62
           LDLRNN+I+GE+PSDFGKL+MLSRALL  N+L GSIP S+TKM+RLADLDLSMNGISG+I
Sbjct: 204 LDLRNNRITGEIPSDFGKLQMLSRALLGRNELTGSIPNSITKMSRLADLDLSMNGISGLI 263

Query: 63  PENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFMA 122
           P N+G MPVLSTLNLDSNRISGQIPPTL+SNGGLGILNLSRN+L+GQIPDVF   SYFMA
Sbjct: 264 PPNIGKMPVLSTLNLDSNRISGQIPPTLMSNGGLGILNLSRNSLEGQIPDVFGKDSYFMA 323

Query: 123 LDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCGNP 182
           LDLSFNALKGPIPNSL SA+YVGHL+LSHNHLCGSIPIGSPFDHLEASSF+NNDCLCGNP
Sbjct: 324 LDLSFNALKGPIPNSLLSAKYVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNP 383

Query: 183 LSTC 187
           L TC
Sbjct: 384 LRTC 387

[Close]
BLAST of Cp4.1LG03g04430 vs. TrEMBL
Match: M5X876_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007530mg PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.8e-76
Identity = 140/186 (75.27%), Postives = 162/186 (87.10%), Query Frame = 1 

Query: 1   MHLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISG 60
           MHLDL NNQISGE+P+DFGKL+MLSRALL+ NQL GS+P S+  MNRLADLDLS N ISG
Sbjct: 179 MHLDLSNNQISGEMPADFGKLKMLSRALLNRNQLTGSVPVSIGNMNRLADLDLSRNRISG 238

Query: 61  MIPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYF 120
            +P+ +G M VLSTLNLD N ISGQ+P TL+SN GLGILNLSRN++ G IPDVF   SYF
Sbjct: 239 SVPDCLGKMQVLSTLNLDGNLISGQLPSTLLSNRGLGILNLSRNSIGGNIPDVFHGNSYF 298

Query: 121 MALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCG 180
           MALDLS+N LKGPIP SLS+A+Y+GHL+LSHNHLCG+IP+G+PFDHLEASSF+NNDCLCG
Sbjct: 299 MALDLSYNNLKGPIPGSLSAAKYIGHLDLSHNHLCGTIPVGNPFDHLEASSFANNDCLCG 358

Query: 181 NPLSTC 187
           NPL TC
Sbjct: 359 NPLRTC 364

[Close]
BLAST of Cp4.1LG03g04430 vs. TrEMBL
Match: B9RHG2_RICCO (Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1525390 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 9.0e-76
Identity = 139/185 (75.14%), Postives = 163/185 (88.11%), Query Frame = 1 

Query: 2   HLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGM 61
           HLDLRNNQ+SGE+PSDFG L+MLSRA+LS NQ+ GSIP+S+  M RLADLDL+MN ISG 
Sbjct: 238 HLDLRNNQVSGELPSDFGSLKMLSRAMLSRNQISGSIPSSIANMYRLADLDLAMNRISGW 297

Query: 62  IPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFM 121
           +P  +GNMPVLSTLNLDSN ISG++P +L+S  GLGILNLSRN+++G IP+VF P SYFM
Sbjct: 298 LPSWLGNMPVLSTLNLDSNMISGELPSSLLSCDGLGILNLSRNSIEGNIPNVFGPKSYFM 357

Query: 122 ALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCGN 181
           ALDLSFN LKGPIP+SLSSA+Y+GHL+LS+NHLCG IPIG+PFD LE SSFSNNDCLCGN
Sbjct: 358 ALDLSFNKLKGPIPSSLSSAKYIGHLDLSNNHLCGPIPIGAPFDRLEGSSFSNNDCLCGN 417

Query: 182 PLSTC 187
           PL TC
Sbjct: 418 PLRTC 422

[Close]
BLAST of Cp4.1LG03g04430 vs. TrEMBL
Match: W9SDM9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000482 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 6.4e-74
Identity = 137/185 (74.05%), Postives = 163/185 (88.11%), Query Frame = 1 

Query: 2   HLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGM 61
           H+DL NNQ++GE+P  FG+L+MLSRALL+ N+L G IP S+T M+RLADLDLSMN IS  
Sbjct: 188 HIDLSNNQLTGEIPVQFGQLKMLSRALLNRNRLTGPIPKSITSMDRLADLDLSMNQISDW 247

Query: 62  IPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFM 121
           IP+ +G M VLSTLNLDSN I+G+IPPTL+S+G +GILNLSRNAL+G IP+VF P SYFM
Sbjct: 248 IPDQIGKMRVLSTLNLDSNLITGKIPPTLLSSG-MGILNLSRNALEGNIPNVFGPHSYFM 307

Query: 122 ALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCGN 181
           ALDLSFN LKGPIP SLSSA+Y+GHL++SHNHLCG+IP+GSPFDHLEASSF+NNDCLCGN
Sbjct: 308 ALDLSFNNLKGPIPGSLSSAKYIGHLDMSHNHLCGAIPVGSPFDHLEASSFANNDCLCGN 367

Query: 182 PLSTC 187
           PL TC
Sbjct: 368 PLRTC 371

[Close]
BLAST of Cp4.1LG03g04430 vs. TrEMBL
Match: A0A067L4U5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16734 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.4e-73
Identity = 134/185 (72.43%), Postives = 160/185 (86.49%), Query Frame = 1 

Query: 2   HLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGM 61
           HLDL NN++SG++P+DFG L+MLSRALL+ NQL GSIP+S+  MN LADLDLSMN ISG 
Sbjct: 181 HLDLSNNKVSGKLPADFGNLKMLSRALLNRNQLTGSIPSSIANMNLLADLDLSMNQISGW 240

Query: 62  IPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFM 121
           +P  +GNM VLSTLNLDSN ISG+IP +L+S+ GLGILNLSRN+++G +P+VF P SYFM
Sbjct: 241 LPSWLGNMRVLSTLNLDSNMISGEIPASLLSSTGLGILNLSRNSIEGNVPNVFGPKSYFM 300

Query: 122 ALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCGN 181
           ALDLS+N LKGPIP S+SSA+Y+GHL+ SHNHLCG IP+GSPFD LE SSFSNNDCLCGN
Sbjct: 301 ALDLSYNNLKGPIPGSISSAKYIGHLDFSHNHLCGPIPVGSPFDRLEESSFSNNDCLCGN 360

Query: 182 PLSTC 187
           PL TC
Sbjct: 361 PLKTC 365

[Close]
BLAST of Cp4.1LG03g04430 vs. TAIR10
Match: AT3G20820.1 (AT3G20820.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 246.5 bits (628), Expect = 1.3e-65
Identity = 120/186 (64.52%), Postives = 147/186 (79.03%), Query Frame = 1 

Query: 1   MHLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISG 60
           MHLDLRNN ISG +PSD G+L+MLSRALLS N++ G IP S+T + RLAD+DLS N + G
Sbjct: 178 MHLDLRNNLISGVIPSDVGRLKMLSRALLSGNRITGRIPESLTNIYRLADVDLSGNQLYG 237

Query: 61  MIPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYF 120
            IP ++G M VL+TLNLD N+ISG+IP TL+++  +  LNLSRN L G+IP+ F P SYF
Sbjct: 238 TIPPSLGRMSVLATLNLDGNKISGEIPQTLMTSSVMN-LNLSRNLLQGKIPEGFGPRSYF 297

Query: 121 MALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCG 180
             LDLS+N LKGPIP S+S A ++GHL+LSHNHLCG IP+GSPFDHLEA+SF  NDCLCG
Sbjct: 298 TVLDLSYNNLKGPIPRSISGASFIGHLDLSHNHLCGRIPVGSPFDHLEAASFMFNDCLCG 357

Query: 181 NPLSTC 187
            PL  C
Sbjct: 358 KPLRAC 362

[Close]
BLAST of Cp4.1LG03g04430 vs. TAIR10
Match: AT3G12610.1 (AT3G12610.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 240.0 bits (611), Expect = 1.2e-63
Identity = 118/184 (64.13%), Postives = 144/184 (78.26%), Query Frame = 1 

Query: 2   HLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGM 61
           HL+L  N I+G +P+DFG L+MLSR LL  N+L GSIP S++ M RLADLDLS N I G 
Sbjct: 187 HLELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGP 246

Query: 62  IPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFM 121
           IPE MGNM VLS LNLD N ++G IP +L+SN GL + NLSRNAL+G IPDVF   +Y +
Sbjct: 247 IPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLV 306

Query: 122 ALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCGN 181
           +LDLS N+L G IP+SLSSA++VGHL++SHN LCG IP G PFDHLEA+SFS+N CLCG 
Sbjct: 307 SLDLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQCLCGG 366

Query: 182 PLST 186
           PL+T
Sbjct: 367 PLTT 370

[Close]
BLAST of Cp4.1LG03g04430 vs. TAIR10
Match: AT5G12940.1 (AT5G12940.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 227.6 bits (579), Expect = 6.2e-60
Identity = 108/185 (58.38%), Postives = 142/185 (76.76%), Query Frame = 1 

Query: 2   HLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGM 61
           HLDLRNN ISG +P D G+L+M+SR LLS N++ G IP S+T++ RLADL+LSMN ++G 
Sbjct: 186 HLDLRNNNISGVIPRDIGRLKMVSRVLLSGNKISGQIPDSLTRIYRLADLELSMNRLTGP 245

Query: 62  IPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFM 121
           IP + G M VL+TLNLD N ISG IP +L+++  +  LNLS N + G IP+ F P SYF 
Sbjct: 246 IPASFGKMSVLATLNLDGNLISGMIPGSLLASS-ISNLNLSGNLITGSIPNTFGPRSYFT 305

Query: 122 ALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCGN 181
            LDL+ N L+GPIP S+++A ++GHL++SHNHLCG IP+GSPFDHL+A+SF+ N CLCG 
Sbjct: 306 VLDLANNRLQGPIPASITAASFIGHLDVSHNHLCGKIPMGSPFDHLDATSFAYNACLCGK 365

Query: 182 PLSTC 187
           PL  C
Sbjct: 366 PLGNC 369

[Close]
BLAST of Cp4.1LG03g04430 vs. TAIR10
Match: AT5G44700.1 (AT5G44700.1 Leucine-rich repeat transmembrane protein kinase)

HSP 1 Score: 131.7 bits (330), Expect = 4.6e-31
Identity = 76/208 (36.54%), Postives = 112/208 (53.85%), Query Frame = 1 

Query: 2   HLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGM 61
           H+DL NN +SG +P+  GKL +L    LSSN+  GS+P  +  +  +  L L  N ++G 
Sbjct: 652 HIDLNNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGS 711

Query: 62  IPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIP-DVFCPGSYF 121
           IP+ +GN+  L+ LNL+ N++SG +P T+     L  L LSRNAL G+IP ++       
Sbjct: 712 IPQEIGNLQALNALNLEENQLSGPLPSTIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQ 771

Query: 122 MALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIP--------------------- 181
            ALDLS+N   G IP+++S+   +  L+LSHN L G +P                     
Sbjct: 772 SALDLSYNNFTGRIPSTISTLPKLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEG 831

Query: 182 -IGSPFDHLEASSFSNNDCLCGNPLSTC 187
            +   F   +A +F  N  LCG+PLS C
Sbjct: 832 KLKKQFSRWQADAFVGNAGLCGSPLSHC 859

[Close]
BLAST of Cp4.1LG03g04430 vs. TAIR10
Match: AT1G12460.1 (AT1G12460.1 Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 128.6 bits (322), Expect = 3.9e-30
Identity = 72/183 (39.34%), Postives = 105/183 (57.38%), Query Frame = 1 

Query: 3   LDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGMI 62
           LDL +N+++G +P   GK+E LS   L +N + G IP  +  +  L  L+L    + G +
Sbjct: 313 LDLESNKLNGSIPGSIGKMESLSVIRLGNNSIDGVIPRDIGSLEFLQVLNLHNLNLIGEV 372

Query: 63  PENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFMA 122
           PE++ N  VL  L++  N + G+I   L++   + IL+L RN L+G IP      S    
Sbjct: 373 PEDISNCRVLLELDVSGNDLEGKISKKLLNLTNIKILDLHRNRLNGSIPPELGNLSKVQF 432

Query: 123 LDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCGNP 182
           LDLS N+L GPIP+SL S   + H N+S+N+L G IP         +S+FSNN  LCG+P
Sbjct: 433 LDLSQNSLSGPIPSSLGSLNTLTHFNVSYNNLSGVIPPVPMIQAFGSSAFSNNPFLCGDP 492

Query: 183 LST 186
           L T
Sbjct: 493 LVT 495

[Close]
BLAST of Cp4.1LG03g04430 vs. NCBI nr
Match: gi|659123688|ref|XP_008461788.1| (PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Cucumis melo])

HSP 1 Score: 330.9 bits (847), Expect = 1.5e-87
Identity = 161/185 (87.03%), Postives = 173/185 (93.51%), Query Frame = 1 

Query: 2   HLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGM 61
           HLDLRNN+I+GE+PSDFGKL+MLSRALL  NQL GSIP SVTKM RLADLDLSMNGISG+
Sbjct: 179 HLDLRNNRITGEIPSDFGKLQMLSRALLGRNQLTGSIPDSVTKMYRLADLDLSMNGISGL 238

Query: 62  IPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFM 121
           IP NMGNMPVLSTLNLDSNR+SGQIPPTL++N GLGILNLSRN L+GQIPDVF P SYFM
Sbjct: 239 IPANMGNMPVLSTLNLDSNRLSGQIPPTLLNNDGLGILNLSRNGLEGQIPDVFHPDSYFM 298

Query: 122 ALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCGN 181
           ALDLSFNALKGPIPNSLSSA+YVGHL+LSHNHLCGSIP GSPFDHLEASSF+NNDCLCGN
Sbjct: 299 ALDLSFNALKGPIPNSLSSAKYVGHLDLSHNHLCGSIPNGSPFDHLEASSFTNNDCLCGN 358

Query: 182 PLSTC 187
           PL TC
Sbjct: 359 PLRTC 363

[Close]
BLAST of Cp4.1LG03g04430 vs. NCBI nr
Match: gi|778682826|ref|XP_004149603.2| (PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 6.1e-86
Identity = 158/184 (85.87%), Postives = 173/184 (94.02%), Query Frame = 1 

Query: 3   LDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISGMI 62
           LDLRNN+I+GE+PSDFGKL+MLSRALL  N+L GSIP S+TKM+RLADLDLSMNGISG+I
Sbjct: 204 LDLRNNRITGEIPSDFGKLQMLSRALLGRNELTGSIPNSITKMSRLADLDLSMNGISGLI 263

Query: 63  PENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYFMA 122
           P N+G MPVLSTLNLDSNRISGQIPPTL+SNGGLGILNLSRN+L+GQIPDVF   SYFMA
Sbjct: 264 PPNIGKMPVLSTLNLDSNRISGQIPPTLMSNGGLGILNLSRNSLEGQIPDVFGKDSYFMA 323

Query: 123 LDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCGNP 182
           LDLSFNALKGPIPNSL SA+YVGHL+LSHNHLCGSIPIGSPFDHLEASSF+NNDCLCGNP
Sbjct: 324 LDLSFNALKGPIPNSLLSAKYVGHLDLSHNHLCGSIPIGSPFDHLEASSFTNNDCLCGNP 383

Query: 183 LSTC 187
           L TC
Sbjct: 384 LRTC 387

[Close]
BLAST of Cp4.1LG03g04430 vs. NCBI nr
Match: gi|1009105726|ref|XP_015888084.1| (PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Ziziphus jujuba])

HSP 1 Score: 294.3 bits (752), Expect = 1.5e-76
Identity = 140/186 (75.27%), Postives = 163/186 (87.63%), Query Frame = 1 

Query: 1   MHLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISG 60
           MHLDL NN+++G+VPSDFG L+MLSRALLS NQL GSIP S+  MNRLADLDL+MN ISG
Sbjct: 179 MHLDLSNNRLTGQVPSDFGNLKMLSRALLSRNQLTGSIPESIGYMNRLADLDLAMNQISG 238

Query: 61  MIPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYF 120
            IP+ +G M VLSTLNLDSN++SGQIP TL+ N GLGILNLSRN+L+G IP+VF   SYF
Sbjct: 239 SIPDRLGKMAVLSTLNLDSNKLSGQIPSTLLGNTGLGILNLSRNSLEGNIPNVFSSNSYF 298

Query: 121 MALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCG 180
           M LDLS+N LKGPIP SLSSA++VGH++LSHNHLCG+IP+GSPFDHLEASSF+NNDCLCG
Sbjct: 299 MVLDLSYNNLKGPIPGSLSSAKFVGHMDLSHNHLCGTIPVGSPFDHLEASSFANNDCLCG 358

Query: 181 NPLSTC 187
           NPL TC
Sbjct: 359 NPLKTC 364

[Close]
BLAST of Cp4.1LG03g04430 vs. NCBI nr
Match: gi|596049234|ref|XP_007220472.1| (hypothetical protein PRUPE_ppa007530mg [Prunus persica])

HSP 1 Score: 293.5 bits (750), Expect = 2.6e-76
Identity = 140/186 (75.27%), Postives = 162/186 (87.10%), Query Frame = 1 

Query: 1   MHLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISG 60
           MHLDL NNQISGE+P+DFGKL+MLSRALL+ NQL GS+P S+  MNRLADLDLS N ISG
Sbjct: 179 MHLDLSNNQISGEMPADFGKLKMLSRALLNRNQLTGSVPVSIGNMNRLADLDLSRNRISG 238

Query: 61  MIPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYF 120
            +P+ +G M VLSTLNLD N ISGQ+P TL+SN GLGILNLSRN++ G IPDVF   SYF
Sbjct: 239 SVPDCLGKMQVLSTLNLDGNLISGQLPSTLLSNRGLGILNLSRNSIGGNIPDVFHGNSYF 298

Query: 121 MALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCG 180
           MALDLS+N LKGPIP SLS+A+Y+GHL+LSHNHLCG+IP+G+PFDHLEASSF+NNDCLCG
Sbjct: 299 MALDLSYNNLKGPIPGSLSAAKYIGHLDLSHNHLCGTIPVGNPFDHLEASSFANNDCLCG 358

Query: 181 NPLSTC 187
           NPL TC
Sbjct: 359 NPLRTC 364

[Close]
BLAST of Cp4.1LG03g04430 vs. NCBI nr
Match: gi|645250647|ref|XP_008231308.1| (PREDICTED: DNA-damage-repair/toleration protein DRT100 [Prunus mume])

HSP 1 Score: 292.4 bits (747), Expect = 5.8e-76
Identity = 140/186 (75.27%), Postives = 161/186 (86.56%), Query Frame = 1 

Query: 1   MHLDLRNNQISGEVPSDFGKLEMLSRALLSSNQLGGSIPASVTKMNRLADLDLSMNGISG 60
           MHLDL NNQISGE+P+DFGKL+MLSRALL+ NQL GSIP S+  MNRLADLDLS N ISG
Sbjct: 183 MHLDLSNNQISGEMPADFGKLKMLSRALLNRNQLTGSIPVSIGNMNRLADLDLSRNRISG 242

Query: 61  MIPENMGNMPVLSTLNLDSNRISGQIPPTLISNGGLGILNLSRNALDGQIPDVFCPGSYF 120
            +P+ +G M VLSTLNLD N ISGQ+P  L+SN GLGILNLSRN++ G IPDVF   SYF
Sbjct: 243 SVPDCLGKMQVLSTLNLDGNLISGQLPSALLSNRGLGILNLSRNSIGGNIPDVFHGNSYF 302

Query: 121 MALDLSFNALKGPIPNSLSSAEYVGHLNLSHNHLCGSIPIGSPFDHLEASSFSNNDCLCG 180
           MALDLS+N LKGPIP SLS+A+Y+GHL+LSHNHLCG+IP+G+PFDHLEASSF+NNDCLCG
Sbjct: 303 MALDLSYNNLKGPIPGSLSAAKYIGHLDLSHNHLCGTIPVGNPFDHLEASSFANNDCLCG 362

Query: 181 NPLSTC 187
           NPL TC
Sbjct: 363 NPLKTC 368

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g04430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DR100_ARATH2.1e-6264.13DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE... [more]
GSO2_ARATH8.2e-3036.54LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana G... [more]
Y1124_ARATH6.9e-2939.34Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidop... [more]
GSO1_ARATH4.5e-2836.54LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana G... [more]
IRK_ARATH5.8e-2839.33Probable LRR receptor-like serine/threonine-protein kinase IRK OS=Arabidopsis th... [more]
BLAST of Cp4.1LG03g04430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCF0_CUCSA4.3e-8685.87Leucine rich repeat protein OS=Cucumis sativus GN=Csa_3G697970 PE=4 SV=1[more]
M5X876_PRUPE1.8e-7675.27Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007530mg PE=4 SV=1[more]
B9RHG2_RICCO9.0e-7675.14Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCO... [more]
W9SDM9_9ROSA6.4e-7474.05Uncharacterized protein OS=Morus notabilis GN=L484_000482 PE=4 SV=1[more]
A0A067L4U5_JATCU2.4e-7372.43Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16734 PE=4 SV=1[more]
BLAST of Cp4.1LG03g04430 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G20820.11.3e-6564.52 Leucine-rich repeat (LRR) family protein[more]
AT3G12610.11.2e-6364.13 Leucine-rich repeat (LRR) family protein[more]
AT5G12940.16.2e-6058.38 Leucine-rich repeat (LRR) family protein[more]
AT5G44700.14.6e-3136.54 Leucine-rich repeat transmembrane protein kinase[more]
AT1G12460.13.9e-3039.34 Leucine-rich repeat protein kinase family protein[more]
BLAST of Cp4.1LG03g04430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659123688|ref|XP_008461788.1|1.5e-8787.03PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Cucumis melo][more]
gi|778682826|ref|XP_004149603.2|6.1e-8685.87PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Cucumis sativus][more]
gi|1009105726|ref|XP_015888084.1|1.5e-7675.27PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Ziziphus jujuba][more]
gi|596049234|ref|XP_007220472.1|2.6e-7675.27hypothetical protein PRUPE_ppa007530mg [Prunus persica][more]
gi|645250647|ref|XP_008231308.1|5.8e-7675.27PREDICTED: DNA-damage-repair/toleration protein DRT100 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0016310 phosphorylation
biological_process GO:0042493 response to drug
biological_process GO:0009411 response to UV
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004650 polygalacturonase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g04430.1Cp4.1LG03g04430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 2..21
score:
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 1..182
score: 1.1
NoneNo IPR availablePANTHERPTHR27000:SF151DNA-DAMAGE-REPAIR/TOLERATION PROTEIN DRT100-RELATEDcoord: 1..182
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g04430CmaCh14G010160Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g04430CmaCh01G002180Cucurbita maxima (Rimu)cmacpeB494
Cp4.1LG03g04430CmoCh01G002290Cucurbita moschata (Rifu)cmocpeB453
Cp4.1LG03g04430CmoCh14G010320Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g04430Cla017256Watermelon (97103) v1cpewmB595
Cp4.1LG03g04430Csa3G697970Cucumber (Chinese Long) v2cpecuB599
Cp4.1LG03g04430MELO3C023962Melon (DHL92) v3.5.1cpemeB566
Cp4.1LG03g04430ClCG10G012510Watermelon (Charleston Gray)cpewcgB544
Cp4.1LG03g04430Lsi03G012160Bottle gourd (USVL1VR-Ls)cpelsiB500
Cp4.1LG03g04430MELO3C023962.2Melon (DHL92) v3.6.1cpemedB673
Cp4.1LG03g04430CsaV3_3G032280Cucumber (Chinese Long) v3cpecucB0748
Cp4.1LG03g04430Bhi11G001196Wax gourdcpewgoB0742
Cp4.1LG03g04430CsGy3G027630Cucumber (Gy14) v2cgybcpeB396
Cp4.1LG03g04430Carg11230Silver-seed gourdcarcpeB1147
Cp4.1LG03g04430Carg07315Silver-seed gourdcarcpeB1073
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g04430Cp4.1LG02g15490Cucurbita pepo (Zucchini)cpecpeB449
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g04430Silver-seed gourdcarcpeB0634
Cp4.1LG03g04430Cucumber (Chinese Long) v3cpecucB0789
Cp4.1LG03g04430Wax gourdcpewgoB0822
Cp4.1LG03g04430Cucurbita pepo (Zucchini)cpecpeB185
Cp4.1LG03g04430Cucurbita pepo (Zucchini)cpecpeB336
Cp4.1LG03g04430Cucumber (Gy14) v1cgycpeB0550
Cp4.1LG03g04430Cucurbita maxima (Rimu)cmacpeB404
Cp4.1LG03g04430Cucurbita maxima (Rimu)cmacpeB927
Cp4.1LG03g04430Cucurbita moschata (Rifu)cmocpeB367
Cp4.1LG03g04430Cucurbita moschata (Rifu)cmocpeB861
Cp4.1LG03g04430Wild cucumber (PI 183967)cpecpiB601
Cp4.1LG03g04430Wild cucumber (PI 183967)cpecpiB637
Cp4.1LG03g04430Cucumber (Chinese Long) v2cpecuB633
Cp4.1LG03g04430Bottle gourd (USVL1VR-Ls)cpelsiB494
Cp4.1LG03g04430Melon (DHL92) v3.5.1cpemeB559
Cp4.1LG03g04430Cucumber (Gy14) v2cgybcpeB957
Cp4.1LG03g04430Melon (DHL92) v3.6.1cpemedB665