Cp4.1LG03g04010 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g04010
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDNA polymerase delta subunit 2
LocationCp4.1LG03 : 1984715 .. 1989630 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCACGTGAGTGGGCCTCCAAAAGCTGGAGCGGCCCAAGTACGGCCCAAGTTTTTCTCTTAGAATTTTAGAATTGAAGTTTTGGGGAATGAAAAAGCAGTCTGGAAATTGCGCCAATTTTTAAGCAGGGGAATTCTACGGTTCTACCCTACCGATTGAGGTTCGTCGGAGTAAAATCATTCTCTTCCTCGCCATGGAAATCGATTCACAGAAGAATCTCCTGCGCAAGCAGTGTACCTATGAAATATTGGTATCTCTCAGTCTCTTCTATTTCTTAGTTCGCTGTTAATTTCCTCGAAAGTTCTTTTGGCTTTCCCGCCTTTTTTCTTTCCCCCAGCACGGCTACTTTGGAAGTGGGAGAAAATTTCCCTTGTTATTTGCTCGTTTCACTTACTTCAGATACGGAATTCAATGAAGGCCGGAAAATGCGCGGGAATTGGGAACAATCTCGCCGGTTTGTTGTTTATTTGTTTGTTTTNTATTGTTCCTTAAATAGTGAACATTTTGAAGCCTTGAGGGTGTATAGATAAGAGTCATGCTTTACTTGATGATATTTTTTTTAATGAAGTGTCTGTCAATTGCAACATATTTTGTGCGATTGTGGTGAACAGCCATGGGGCATTGCTCTTCACTCACTTTTGAATTGCTCCTTGATACGACCGGCTGTTTCTCTGAAGATGGATGATGGTTACCGTTTGATTAATTAGACTAAGGTCTCCTCATAGTGGAATGTGGTTTGAATATTAATAATGTTCCTAAGAGTATATNTTTTGGGCTAAATGGTGTTATTTTATGTAGGATGAGCAGTACAAGATTCAGAAGGAGACGTACAAGGGCCAGCAATACAGTCATATTTACTTTGTTCGACTCCACTTGATGAGAACGATACTTCATTCACTTGTCTCCAAGTGGAAACCCCATTTACCTGGTATTTATTTTCCCTTTTCATTTTATTTTTCTATTTGATACCATGAGAAGTGGGATGGAAAGTGGATTTTGTTCTGGATGCATGAGTACATAATAATTATTGATTTTAGGGTCCTTTAATCGGTTCATTTTCTTCCTTTTGGTGGGTTTCGATATCTTAACACATTCAAAAGTTCAGTGTTCGTATTGATGTGGTTGAACTCAATTTAGGATGGATTTGAACCAATCCTTACTTTAAATAGGTTTTTAGCTTTTCGTCTTGCATGTAAGTTGCAAGTGTAACTGTTTAAGCATTGTGTTTTTAATCATAGTTTAAGGTAGAATTTAGAAGGAATTTCTTGAGGAATGGGTTTTATGGGTCAGGTGAAAATTTTTCTTGAAAACAATGTCTTGCAGTTCGTACTGTATTGGAGTTGGAGGAAGGCAAGGAATGTGTCATCGTTGGAACCCTCTACAAGCACATGAAACTTAAACCTACCATTCTGGACGAGTATTCAAAGGAGGTAATACTTCAAACAAATATGTCAACTACCATTTATACGACTCTTTTATGATTTTGGCTTTATGGGATTTGATTGAGACGCTTAAATGGAATGTACAGAGATCTGTCACCCCACTGGTTAAGCCACACAACTTTATGCATCCAGATGATTATCTAGTCTTGGAAGATGACAGTGGGAGAGTAAAGCTTTCTGGGGCTGTGCTTTTACCTTCTGTATATGCTACAGGTCCGTATCACAGAATAAAATCGAATAGAACTATGATGCCCTTTTCCCAGCGAGATCCTCGAGGAATTTCATAAAATTGTGATAAATTTTTTGAGCATGTTGGTACATGCTGCACCTGTTCATCCTCTAACTTCTCTTCTAATTTTGTATGAGTTGATTCATATTGCATTTTTTGTTGCTGCTCATGTATTGCTTTTCTTCCCTGCTGCAATTAATGCAACAATTCATAATGTATTGTCTAATATGTGTGCCAGGGATTATTGTTGCATTGCATGGAAAGGAAACCTGCGTTGGTGACTTTTTTGTTGATGACATCCTAGAAGCTGGCTTGCCACCTCAGATAGAGCGGCCTCTCATACCAAGTAAGATGGGATAACCTCCCTCTTTTTTTCGTATTTACTGTTTCCATCTTTTTACAGGAGTGAAATGGATTCAATTATGATGTAGTGAGAGGTTTAATCACGTATTTTGTTATACTTTAATGTCACCAATTTCTGCCATATTAGTTTATTGTTCCTTAAATAGTGAACATTTTGAAGCCTTGAGGGTGTATAGATAAGAGTCATGCTTTACTTGATGATATTTTTTTTAATGAAGTGTCTGTCAATTGCAACATATTTTGTGCGATTGTGGTGAACAGCCATGGGGCATTGCTCTTCACTCACTTTTGAATTGCTCCTTGATACGACCGGCTGTTTCTCTGAAGATGGATGATGGTTACCGTTTGATTAATTAGACTAAGGTCTCCTCATAGTGGAATGTGGTTTGAATATTAATAATGTTCCTAAGAGTATATGACACTCCTTTCAAAATGATTATGAAGGTTCATGAGGGACCAAGATGCTTTATAGCAGTATTTCTTATATTAAAAAGGTTCAAATGTATGCAGACGAAGATAAATACGTGGTTTTTGTGTCGGGCCTAAGTATTGGGAGCAGTAGCTCTAATCCTCTACAGTTTCAGCTCCTTGTTGATCATATAACAGGACATTTAGGGGATGAGGAGGTTGGTTTCATCTTTATATTTTCCCTCTCTAAATGTTTATCAGTTGCTAAGATTTTTAGAACCATTAACTGAACAGGAACAAGGGATTGCGGCTCAAATAGTTCATGTTGTTATTGCTGGGAATTCTGTTGAAATTCCTCGTGGACTTTTAAATGGGCAGGTAGAGGCTTCACAAACTATGTTTCCGATATATCCTGTTTCAATATGTTTAAATATGTTGCCGAGATCAGTTTATTTTCTTTAACGAATGTAGTATCTTTTCTTGTCATTACTTACTAATGAAAGAATTGAAAGGCTGGTCTTCTTGAACTTTTACAAGAAGCCTTGAATGGAACAATTCGTTTTATGGTTTTTCTCGATTAATTTACTGGAGTTCTTATTTAACATGTAATTTTCTAATTTCGAGAAGAAAATGAAAGAAAAGTTAACGTGACGTTTGTTAGATAAGGATAAGGGGAAATTTAGAGCCATCCCAGTATTCAATTATTTTCTGTGCATTCCCTAGTAATGTCAGGGATGCTAGGCTTTTTGTTGATGCATGCATGATGTATTTCTGCAGCACCTATCTGCTAAGGACCAAACGAAGCTGACAGAACCACTTAAAGAGTTAGATATCCTGTTGAATCAGGTTCTTATCCAGTTGATTCTCAGTCCAACTTTTTATCAAATTCAAATTTATATTCTTTTTTCCTTTAATCCAATTACCTGATTGTAAATCCATTATCCTTTTCATCAGCTTGCTGCAGGTTTATCTGTGGACATCATGCCGGGTCCCAGTGACCCAGCCAATTTTTCGTTACCCCAGCAGGTTACAGCCGGAACTCCTGCTTTTCATCCCTTGTTTGATTTGTCCATAATGTCATTTTCGTTGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCGTCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTTGATAATTTCAGGCAAGTCAATAATGTCATCCTGATAGGGTAATTGGCTGTTTAGTGTGAACTTGAATCAGCCACACTTCAATTGGTAGTCCTTTGGTTTCAGGTTTCTTGGAACATCGGGCCAGAATGCAGACGATCTTGACAAGTATTCCGAAGCTAAAGATAAACTTGAATTTATGGAGAGGACCTTGAGATGGAGGCATCTAGCACCAACTGCTCCAAATACTCTCGGTACAAGCTACATTCTTATTTGTGTTGGTGGATAAGCCATTGAAACAATCTCTTCTTGATTCTATAAAAAATTTGCAATAATATAAAACTTTTCGTAAGTAGTATTTATATTATTCGAGTCTTACAGGTTGTTACCCTTTCACCGATCGAGATCCTTTCCTGATTGAAAGCTGTCCTCATGTCTATTTTATTGGCAATCAGGACAAGTTTGATACTCGCTTAATAAAGGGTATATTTTCACATAAACTCTCTATATTAATTAGTATAATTGCTGATTTACTTCTCCTAAAGGATGTATGAACAAGGTAATTTATTGTCATGTATATTACTTTTTGAAAATGCAGGTTCTGAAGGACAGATGGTAAGACTCATCGCAATTCCAAGATTTTGCGAGAATGGGACTGCCGTAATGGTAATTTTCTTTTACTGATTCACCTTTACCCAATATTTATACTTGTTTACCGCATCTCCCTAGTCGTTACTGTTGGAATGAAACGTTGTTAGATCAAAGGTTGAAGCATGTTGTTTATATAGAGAATTACCAATACAAATATTTATGCTCAACAAATTGGCCCTCATTTGTTTGTTTAACTTTTAATGTTTATGCAACCAAATCATCTGCATCATCGTCGTCTTTTTCCTCGGAAACTTCATTAAAGTCGGGAAAGGCTATGGATATTTTTTGTGTGCTTCTTACTGGTCCCTTTCATCTTCTGTATCTCAACTGTGATTGATTCCAAAGATAATGTTGTCCTCATCCCTTTTGCAGCTTAATTTGAGAAATCTCGACTGCCACGTTCTGAGTTTCGAGACTGAATTCAGCTGATTATTATGTCAAAAGAAACGTTAAAGCGATCGATCGAGAATCTGGTTTGGAATTCAGTTGTTTATGTATGGTGTAAAAAGGGTTTGCAGTGAAATGCAGAATGATCGCCATTTTCTCAACAGTTCATCTTCTGGGGAGGAGGATGATAGTGCTAAATTAATATTTTTTTTTAGTAAGGATTAGTGTGAGTTTAGTCCAATTTTTTTCTTTTTAAAATTGTGTTTGAATAGGTCTGTAAAATT

mRNA sequence

ATGGGCCACGTTCGTCGGAGTAAAATCATTCTCTTCCTCGCCATGGAAATCGATTCACAGAAGAATCTCCTGCGCAAGCAGTGTACCTATGAAATATTGGATGAGCAGTACAAGATTCAGAAGGAGACGTACAAGGGCCAGCAATACAGTCATATTTACTTTGTTCGACTCCACTTGATGAGAACGATACTTCATTCACTTGTCTCCAAGTGGAAACCCCATTTACCTGTTCGTACTGTATTGGAGTTGGAGGAAGGCAAGGAATGTGTCATCGTTGGAACCCTCTACAAGCACATGAAACTTAAACCTACCATTCTGGACGAGTATTCAAAGGAGAGATCTGTCACCCCACTGGTTAAGCCACACAACTTTATGCATCCAGATGATTATCTAGTCTTGGAAGATGACAGTGGGAGAGTAAAGCTTTCTGGGGCTGTGCTTTTACCTTCTGTATATGCTACAGGGATTATTGTTGCATTGCATGGAAAGGAAACCTGCGTTGGTGACTTTTTTGTTGATGACATCCTAGAAGCTGGCTTGCCACCTCAGATAGAGCGGCCTCTCATACCAAACGAAGATAAATACGTGGTTTTTGTGTCGGGCCTAAGTATTGGGAGCAGTAGCTCTAATCCTCTACAGTTTCAGCTCCTTGTTGATCATATAACAGGACATTTAGGGGATGAGGAGGAACAAGGGATTGCGGCTCAAATAGTTCATGTTGTTATTGCTGGGAATTCTGTTGAAATTCCTCGTGGACTTTTAAATGGGCAGCACCTATCTGCTAAGGACCAAACGAAGCTGACAGAACCACTTAAAGAGTTAGATATCCTGTTGAATCAGCTTGCTGCAGGTTTATCTGTGGACATCATGCCGGGTCCCAGTGACCCAGCCAATTTTTCGTTACCCCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCGTTTCTTGGAACATCGGGCCAGAATGCAGACGATCTTGACAAGTATTCCGAAGCTAAAGATAAACTTGAATTTATGGAGAGGACCTTGAGATGGAGGCATCTAGCACCAACTGCTCCAAATACTCTCGGTTGTTACCCTTTCACCGATCGAGATCCTTTCCTGATTGAAAGCTGTCCTCATGTCTATTTTATTGGCAATCAGGACAAGTTTGATACTCGCTTAATAAAGGGTTCTGAAGGACAGATGGTAAGACTCATCGCAATTCCAAGATTTTGCGAGAATGGGACTGCCGTAATGCTTAATTTGAGAAATCTCGACTGCCACGTTCTGAGTTTCGAGACTGAATTCAGCTGATTATTATGTCAAAAGAAACGTTAAAGCGATCGATCGAGAATCTGGTTTGGAATTCAGTTGTTTATGTATGGTGTAAAAAGGGTTTGCAGTGAAATGCAGAATGATCGCCATTTTCTCAACAGTTCATCTTCTGGGGAGGAGGATGATAGTGCTAAATTAATATTTTTTTTTAGTAAGGATTAGTGTGAGTTTAGTCCAATTTTTTTCTTTTTAAAATTGTGTTTGAATAGGTCTGTAAAATT

Coding sequence (CDS)

ATGGGCCACGTTCGTCGGAGTAAAATCATTCTCTTCCTCGCCATGGAAATCGATTCACAGAAGAATCTCCTGCGCAAGCAGTGTACCTATGAAATATTGGATGAGCAGTACAAGATTCAGAAGGAGACGTACAAGGGCCAGCAATACAGTCATATTTACTTTGTTCGACTCCACTTGATGAGAACGATACTTCATTCACTTGTCTCCAAGTGGAAACCCCATTTACCTGTTCGTACTGTATTGGAGTTGGAGGAAGGCAAGGAATGTGTCATCGTTGGAACCCTCTACAAGCACATGAAACTTAAACCTACCATTCTGGACGAGTATTCAAAGGAGAGATCTGTCACCCCACTGGTTAAGCCACACAACTTTATGCATCCAGATGATTATCTAGTCTTGGAAGATGACAGTGGGAGAGTAAAGCTTTCTGGGGCTGTGCTTTTACCTTCTGTATATGCTACAGGGATTATTGTTGCATTGCATGGAAAGGAAACCTGCGTTGGTGACTTTTTTGTTGATGACATCCTAGAAGCTGGCTTGCCACCTCAGATAGAGCGGCCTCTCATACCAAACGAAGATAAATACGTGGTTTTTGTGTCGGGCCTAAGTATTGGGAGCAGTAGCTCTAATCCTCTACAGTTTCAGCTCCTTGTTGATCATATAACAGGACATTTAGGGGATGAGGAGGAACAAGGGATTGCGGCTCAAATAGTTCATGTTGTTATTGCTGGGAATTCTGTTGAAATTCCTCGTGGACTTTTAAATGGGCAGCACCTATCTGCTAAGGACCAAACGAAGCTGACAGAACCACTTAAAGAGTTAGATATCCTGTTGAATCAGCTTGCTGCAGGTTTATCTGTGGACATCATGCCGGGTCCCAGTGACCCAGCCAATTTTTCGTTACCCCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCGTTTCTTGGAACATCGGGCCAGAATGCAGACGATCTTGACAAGTATTCCGAAGCTAAAGATAAACTTGAATTTATGGAGAGGACCTTGAGATGGAGGCATCTAGCACCAACTGCTCCAAATACTCTCGGTTGTTACCCTTTCACCGATCGAGATCCTTTCCTGATTGAAAGCTGTCCTCATGTCTATTTTATTGGCAATCAGGACAAGTTTGATACTCGCTTAATAAAGGGTTCTGAAGGACAGATGGTAAGACTCATCGCAATTCCAAGATTTTGCGAGAATGGGACTGCCGTAATGCTTAATTTGAGAAATCTCGACTGCCACGTTCTGAGTTTCGAGACTGAATTCAGCTGA

Protein sequence

MGHVRRSKIILFLAMEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPHLPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLEDDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDKYVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGLLNGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGSFLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVMLNLRNLDCHVLSFETEFS
Homology
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BLAST of Cp4.1LG03g04010 vs. Swiss-Prot
Match: DPOD2_ARATH (DNA polymerase delta small subunit OS=Arabidopsis thaliana GN=POLD2 PE=2 SV=2)

HSP 1 Score: 671.4 bits (1731), Expect = 6.6e-192
Identity = 320/438 (73.06%), Postives = 370/438 (84.47%), Query Frame = 1 

Query: 15  MEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 74
           MEIDS+K   RKQ  Y  LDE+++IQKE Y+GQQYS IYF RLHLMRT+L+SL   WK H
Sbjct: 1   MEIDSEKIHERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSH 60

Query: 75  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 134
           LPV  VL LE+GKEC+IVGTL+KHMKLKP +LDEYSKERSVTPLVKPHNFMHPDD L+LE
Sbjct: 61  LPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILE 120

Query: 135 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 194
           D+SGRVKL+G+ L P++Y TG++VALHGKET  G+FFV+D+LEAGLPPQIERP+   EDK
Sbjct: 121 DESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDK 180

Query: 195 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGLL 254
           YVV +SGL IGS S+NPLQFQLLVDHITGHLGDEEEQG+AAQIVHVVIAGNS E PR L+
Sbjct: 181 YVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKLI 240

Query: 255 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 314
           NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+SVDIMPG +DPANF+LPQQPL+RCLFPGS
Sbjct: 241 NGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGS 300

Query: 315 ---------------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAP 374
                                FLGTSGQN DDL KYSEAK KL+F+ERTLRWRHLAPTAP
Sbjct: 301 SPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTAP 360

Query: 375 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVM 432
           NTLGCYPFTDRDPFLIE+CPHVYF+GNQDK+D RLIKGSEGQ+VRLI IP+FCE G AV 
Sbjct: 361 NTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAVA 420

[Close]
BLAST of Cp4.1LG03g04010 vs. Swiss-Prot
Match: DPOD2_ORYSJ (DNA polymerase delta small subunit OS=Oryza sativa subsp. japonica GN=POLD2 PE=2 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 3.5e-177
Identity = 297/427 (69.56%), Postives = 346/427 (81.03%), Query Frame = 1 

Query: 25  RKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPHLPVRTVLELE 84
           RKQ  Y  LDE+Y IQ E Y+GQQYSHIYF RLH MR +LH+LV  WKPHLPV TVL LE
Sbjct: 3   RKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLGLE 62

Query: 85  EGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLEDDSGRVKLSG 144
           EGK+C+IVGTLYKHMKLKP+ILDEYSKERS  PLVKPHNFMHPDD+L+LED+SGRV L+G
Sbjct: 63  EGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVTLAG 122

Query: 145 AVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDKYVVFVSGLSI 204
           A+  P+ Y TG+++ALHGKET  G+F V+DILEAG+PPQI  P I NEDKYVVFVSGLSI
Sbjct: 123 AI-PPAAYVTGVVIALHGKETSAGNFLVEDILEAGIPPQITLPSI-NEDKYVVFVSGLSI 182

Query: 205 GSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGLLNGQHLSAKDQ 264
           GS   NPLQFQLL+DHITGHLGDE EQ IA+ IV VV+AGNSV I     NGQ +++KDQ
Sbjct: 183 GSEKFNPLQFQLLIDHITGHLGDENEQSIASNIVRVVVAGNSVHISPRFFNGQAVASKDQ 242

Query: 265 TKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS---------- 324
           +++ EP+KELDI+L QL A L VD+MPG +DPANFSLPQQPLHRCLF G+          
Sbjct: 243 SRIAEPIKELDIMLTQLVASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSSCS 302

Query: 325 -----------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTD 384
                      F+GTSGQN DDL KYS+AKDKLEF+ERTLRWRHLAPTAPN+LGCYP+TD
Sbjct: 303 NPHQFELDSVRFIGTSGQNIDDLYKYSDAKDKLEFVERTLRWRHLAPTAPNSLGCYPYTD 362

Query: 385 RDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVMLNLRNLDCHV 431
           +DPFL+ESCPHVYF+GNQDK++T+L++G E Q VRLI IPRFC++G AVMLNLRNL+C  
Sbjct: 363 KDPFLVESCPHVYFVGNQDKYETQLLQGLEKQKVRLICIPRFCDSGVAVMLNLRNLECST 422

[Close]
BLAST of Cp4.1LG03g04010 vs. Swiss-Prot
Match: DPOD2_XENLA (DNA polymerase delta subunit 2 OS=Xenopus laevis GN=pold2 PE=2 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 6.2e-89
Identity = 176/417 (42.21%), Postives = 254/417 (60.91%), Query Frame = 1 

Query: 37  YKIQKETYKGQQYSHIYFVRLHLMRTIL-HSLVSKWKPHLPVRTVLELEEGKECVIVGTL 96
           +++ + T+  +QY+HIY  RL  MR +L  S   +W   + VR + EL+ G++C ++GTL
Sbjct: 39  FRLGERTFT-RQYAHIYATRLEQMRPLLIKSAKQRWGDDIAVRKLCELQGGEKCCVIGTL 98

Query: 97  YKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLEDDSGRVKLSGAVLLPSVYATG 156
           +K M+L+P+IL E S+E ++ P      ++   D L+LED+  R+KL GA  +  +  TG
Sbjct: 99  FKSMELQPSILREISEEHNLLPQPARQKYISDSDELILEDELQRIKLEGATDVQQL-VTG 158

Query: 157 IIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDKYVVFVSGLSIGSSSSNPLQ-F 216
            ++A+ G E   G F V+D     LP Q   P + +ED++V+  SGL +G  S + L   
Sbjct: 159 AVLAVLGAEEDAGKFVVEDFCLTSLPVQSPLPRL-SEDRFVLLTSGLGLGGGSGDSLMGL 218

Query: 217 QLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSV-EIPRG---LLNGQHLSAKDQTKLTEP 276
           QLL+D +TG  G EE+QG AA+I  V++AGN + E  +G   L   ++LS K Q    E 
Sbjct: 219 QLLLDLVTGQAGAEEDQGCAARISRVILAGNLLSENTQGKDSLNKAKYLSKKTQAASVEA 278

Query: 277 LKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS---------------- 336
           +K LD +L Q++  +SVD+MPG  DP N+ LPQQPLHRC+FP S                
Sbjct: 279 VKMLDEILLQMSGSVSVDVMPGAFDPTNYILPQQPLHRCMFPQSALYSTLQLVTNPYEAE 338

Query: 337 -----FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLI 396
                FLGTSGQN  D+ KYS  +D L+ +E TL+  HL PTAP+TLGCYPF   DPF++
Sbjct: 339 IDGVRFLGTSGQNIGDIYKYSSMQDYLDILEWTLQVGHLCPTAPDTLGCYPFYKSDPFIL 398

Query: 397 ESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVMLNLRNLDCHVLSF 427
           ++CPHVYF G+  KF  + + G+EGQ V L+ +P FC   TA ++NLR L C  +SF
Sbjct: 399 QNCPHVYFCGSAPKFSCKEVTGAEGQRVLLLTVPEFCSTQTACLVNLRTLQCQPISF 452

[Close]
BLAST of Cp4.1LG03g04010 vs. Swiss-Prot
Match: DPOD2_MOUSE (DNA polymerase delta subunit 2 OS=Mus musculus GN=Pold2 PE=1 SV=2)

HSP 1 Score: 323.9 bits (829), Expect = 2.6e-87
Identity = 178/426 (41.78%), Postives = 256/426 (60.09%), Query Frame = 1 

Query: 29  TYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSK-WKPHLPVRTVLELEEGK 88
           TY    + +++ + ++  +QY+HIY  RL  MR  L S   + W   + V+ + EL+ G+
Sbjct: 31  TYTNSSQPFRLGERSFN-RQYAHIYATRLIQMRPFLVSRAQQHWGSRVEVKKLCELQPGE 90

Query: 89  ECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLEDDSGRVKLSGAVL 148
           +C +VGTL+K M L+P+IL E S+E ++ P      ++HPDD LVLED+  R+KL G + 
Sbjct: 91  QCCVVGTLFKAMSLQPSILREISEEHNLVPQPPRSKYIHPDDELVLEDELQRIKLKGTID 150

Query: 149 LPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIP-NEDKYVVFVSGLSIGS 208
           + S   TG ++A+ G     G F V+D   A L PQ  +P+ P + D++V+ VSGL +G 
Sbjct: 151 V-SKLVTGTVLAVLGSAKDDGRFQVEDHCFADLAPQ--KPVPPLDTDRFVLLVSGLGLGG 210

Query: 209 SSSNPLQ-FQLLVDHITGHLGDEEEQGIAAQIVHVVIAGN----SVEIPRGLLNGQHLSA 268
                L   QLLVD +TG LGDE EQ  AA +  V++AGN    + +    +   ++L+ 
Sbjct: 211 GGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHNTQSRDSINKAKYLTK 270

Query: 269 KDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS------- 328
           K Q    E +K LD +L QL+A + VD+MPG  DP N++LPQQPLH C+FP +       
Sbjct: 271 KTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQ 330

Query: 329 --------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYP 388
                         FLGTSGQN  D+ +YS  +D LE +E TLR RH++PTAP+TLGCYP
Sbjct: 331 LVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYP 390

Query: 389 FTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVMLNLRNLD 427
           F   DPF+   CPHVYF GN   F +++I+G E Q+V L+A+P F    TA ++NLR+L 
Sbjct: 391 FYKTDPFIFPECPHVYFCGNTPSFGSKIIRGPEDQVVLLVAVPDFSSTQTACLVNLRSLA 450

[Close]
BLAST of Cp4.1LG03g04010 vs. Swiss-Prot
Match: DPOD2_BOVIN (DNA polymerase delta subunit 2 OS=Bos taurus GN=POLD2 PE=1 SV=2)

HSP 1 Score: 322.0 bits (824), Expect = 9.9e-87
Identity = 177/426 (41.55%), Postives = 255/426 (59.86%), Query Frame = 1 

Query: 29  TYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVS-KWKPHLPVRTVLELEEGK 88
           TY    + +++ + ++  +QY+HIY  RL  MR  L S    +W   + V+ + EL+ G+
Sbjct: 31  TYTNSSQPFRLGERSFS-RQYAHIYATRLIQMRPFLVSRAQQRWGSGVLVKKLCELQPGE 90

Query: 89  ECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLEDDSGRVKLSGAVL 148
           +C +VGTL+K M L+P+IL E S+E ++ P      ++HPDD L+LED+  R+KL G + 
Sbjct: 91  KCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELILEDELQRIKLEGTID 150

Query: 149 LPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIP-NEDKYVVFVSGLSIGS 208
           + S   TG ++A+ G     G F V+D   AGL PQ  +P  P + D++V+ VSGL +G 
Sbjct: 151 V-SKLVTGTVLAVLGSAGDDGKFLVEDHCFAGLAPQ--KPACPLDTDRFVLLVSGLGLGG 210

Query: 209 SSSNPLQ-FQLLVDHITGHLGDEEEQGIAAQIVHVVIAGN----SVEIPRGLLNGQHLSA 268
                L   QLLVD +TG LGDE EQ  AA +  V++AGN    + +    +   ++L+ 
Sbjct: 211 GGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHNTQSRDSINKAKYLTK 270

Query: 269 KDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS------- 328
           K Q    E +K LD +L QL+A + VD+MPG  DP N++LPQQPLH C+FP +       
Sbjct: 271 KTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQ 330

Query: 329 --------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYP 388
                         FLGTSGQN  D+ +YS  +D LE +E TL+ RH++PTAP+TLGCYP
Sbjct: 331 LVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLQVRHISPTAPDTLGCYP 390

Query: 389 FTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVMLNLRNLD 427
           F   DPF+   CPHVYF GN   F +++I+G E Q V L+A+P F    TA ++NLR+L 
Sbjct: 391 FYKTDPFIFPECPHVYFCGNTPSFGSKIIQGPEDQTVLLVAVPDFSTTQTACLVNLRSLA 450

[Close]
BLAST of Cp4.1LG03g04010 vs. TrEMBL
Match: A0A0A0LF21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G807320 PE=4 SV=1)

HSP 1 Score: 759.2 bits (1959), Expect = 2.7e-216
Identity = 374/438 (85.39%), Postives = 390/438 (89.04%), Query Frame = 1 

Query: 15  MEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 74
           MEIDS  N+ RKQCTYE+ DEQYKIQKETYKGQQYSHIYF RLHLMRTILHSLVS WKPH
Sbjct: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60

Query: 75  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 134
           LPV TVL LEEGKECVIVGT+YKHMKLKPTILDEYSKERS  PLVKPHNFMHPDD+LVLE
Sbjct: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120

Query: 135 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 194
           D+SGRVKLSG VLLPSVY TGI++ALHGKET VGDF V DILEA LPPQIERPLI +EDK
Sbjct: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180

Query: 195 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGLL 254
           YV+FVSGLSIGSS SNPLQFQLLVDHITGHLGDE+EQGIAAQIVHVVI GNSVEIPRG+L
Sbjct: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240

Query: 255 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 314
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGL VDIMPG SDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300

Query: 315 ---------------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAP 374
                                FLGTSGQN DDL+KYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 375 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVM 432
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KG+EGQMVRLIAIPRFCE G AVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420

[Close]
BLAST of Cp4.1LG03g04010 vs. TrEMBL
Match: F6HLJ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06490 PE=4 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 5.4e-201
Identity = 339/439 (77.22%), Postives = 380/439 (86.56%), Query Frame = 1 

Query: 14  AMEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKP 73
           AMEID++K+L RKQ  YE LDE+++I+KETY+GQQYS IYF RLH+MRT+++SL+  WKP
Sbjct: 3   AMEIDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKP 62

Query: 74  HLPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVL 133
           HLPV TVL LEEGKEC+IVGTLYKHMKLKP ILDEYSKERSV PLVKPHNFMH DD LVL
Sbjct: 63  HLPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVL 122

Query: 134 EDDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNED 193
           ED+SGRVKL G +LLPSVY TG +V LHGKET  G+F V DIL+A LPPQIE PL   ED
Sbjct: 123 EDESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSRED 182

Query: 194 KYVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGL 253
           KYVVFVSGLS+GSS+SNPLQFQLLVDHITGHLGDE+EQGIAAQIVHVVIAGNSV +PRGL
Sbjct: 183 KYVVFVSGLSVGSSTSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGL 242

Query: 254 LNGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPG 313
           LNGQ+L++KDQ++L+EP+KELDILL Q+AAGL +DIMPGP DPANFSLPQQPLHRCLFPG
Sbjct: 243 LNGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFPG 302

Query: 314 S---------------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTA 373
           S                     FLGTSGQN DDL+KYSEAKDKLEFMERTLRWRHLAPTA
Sbjct: 303 SSAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTA 362

Query: 374 PNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAV 432
           PNTLGCYPFTDRDPFLIESCPHVYF+GNQDK++TRLIKGSEGQ+VRLI IP+FCE G AV
Sbjct: 363 PNTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETGVAV 422

[Close]
BLAST of Cp4.1LG03g04010 vs. TrEMBL
Match: A5B0L4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040861 PE=4 SV=1)

HSP 1 Score: 706.1 bits (1821), Expect = 2.7e-200
Identity = 338/438 (77.17%), Postives = 378/438 (86.30%), Query Frame = 1 

Query: 15  MEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 74
           MEID++K+L RKQ  YE LDE+++I+KETY+GQQYS IYF RLH+MRT+++SL+  WKPH
Sbjct: 1   MEIDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPH 60

Query: 75  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 134
           LPV TVL LEEGKEC+IVGTLYKHMKLKP ILDEYSKERSV PLVKPHNFMH DD LVLE
Sbjct: 61  LPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLE 120

Query: 135 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 194
           D+SGRVKL G +LLPSVY TG +V LHGKET  G+F V DIL+A LPPQIE PL   EDK
Sbjct: 121 DESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDK 180

Query: 195 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGLL 254
           YVVFVSGLS+GSS SNPLQFQLLVDHITGHLGDE+EQGIAAQIVHVVIAGNSV +PRGLL
Sbjct: 181 YVVFVSGLSVGSSXSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGLL 240

Query: 255 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 314
           NGQ+L++KDQ++L+EP+KELDILL Q+AAGL +DIMPGP DPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFPGS 300

Query: 315 ---------------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAP 374
                                FLGTSGQN DDL+KYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 301 SAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 375 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVM 432
           NTLGCYPFTDRDPFLIESCPHVYF+GNQDK++TRLIKGSEGQ+VRLI IP+FCE G AV+
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETGVAVV 420

[Close]
BLAST of Cp4.1LG03g04010 vs. TrEMBL
Match: M5W8K3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005894mg PE=4 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 3.4e-195
Identity = 334/438 (76.26%), Postives = 375/438 (85.62%), Query Frame = 1 

Query: 15  MEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 74
           MEIDS+KNL RK  TY +LDE+++IQKE Y+GQQYS IYF RLH+MRT+L+SLV  WKPH
Sbjct: 1   MEIDSEKNLQRKHSTYNLLDERFEIQKEMYRGQQYSQIYFARLHMMRTLLYSLVPNWKPH 60

Query: 75  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 134
           LPV TVL LE+ KEC++VGTLYKHMKLKP ILDEYSK RS TPLVKPHNF+HPDD+LVLE
Sbjct: 61  LPVCTVLGLEKDKECIVVGTLYKHMKLKPCILDEYSKTRSTTPLVKPHNFVHPDDHLVLE 120

Query: 135 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 194
           D+SGRVKL+G +L PSVY TG IV LHGKET  GDF V D+LEAGLPPQIE PL   EDK
Sbjct: 121 DESGRVKLAG-MLSPSVYVTGSIVGLHGKETDAGDFLVLDVLEAGLPPQIELPLKSREDK 180

Query: 195 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGLL 254
           YVVFVSGL +GSSSSNPLQFQLLVDHITGHLGDE+EQGIAAQIVHVVIAGNS+E+PRGLL
Sbjct: 181 YVVFVSGLRVGSSSSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSIEVPRGLL 240

Query: 255 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 314
           NGQ+L++KDQ++L+EP+KELDILL Q+AAGL +DIMPG  DPANF+LPQQPL+RCLFPGS
Sbjct: 241 NGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGLDDPANFALPQQPLNRCLFPGS 300

Query: 315 ---------------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAP 374
                                FLGTSGQN DDL+KYSEAKDKLEF+ERTLRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFDLDDIRFLGTSGQNIDDLEKYSEAKDKLEFVERTLRWRHLAPTAP 360

Query: 375 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVM 432
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDK+D+RL+KGSEGQMVRLI IP+FCE G AV+
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKYDSRLVKGSEGQMVRLICIPKFCETGVAVV 420

[Close]
BLAST of Cp4.1LG03g04010 vs. TrEMBL
Match: A0A0B0N0D0_GOSAR (DNA polymerase delta small subunit-like protein OS=Gossypium arboreum GN=F383_32687 PE=4 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 1.3e-194
Identity = 330/438 (75.34%), Postives = 372/438 (84.93%), Query Frame = 1 

Query: 15  MEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 74
           ME+DSQ+ L RKQ TY  LDE ++IQKE Y+GQQYS IYF RLH+MRT+L+SLV  WK H
Sbjct: 1   MEVDSQEQLQRKQSTYLSLDENFEIQKEVYRGQQYSQIYFARLHMMRTLLYSLVPNWKSH 60

Query: 75  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 134
           LPV TVLELEEGKEC+IVGTLYKHMKLKP ILDEYSKERSV PL+KPHNFMH DDYLVLE
Sbjct: 61  LPVCTVLELEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLIKPHNFMHQDDYLVLE 120

Query: 135 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 194
           D+SGRVKL G  L PSVY TG++VALHGKET  G FFV+D+LEAGLPPQIERPL   EDK
Sbjct: 121 DESGRVKLGGTKLSPSVYVTGVVVALHGKETSAGAFFVEDVLEAGLPPQIERPLKSREDK 180

Query: 195 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGLL 254
           YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQG+AA+IVH+VI GNSVEI  GLL
Sbjct: 181 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGLAAEIVHLVIVGNSVEISHGLL 240

Query: 255 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 314
           NGQ+L++KDQ++L+EP KELDILL Q+AA L +DIMPG SDPANF+LPQQPL+RCLFPGS
Sbjct: 241 NGQNLASKDQSRLSEPFKELDILLTQIAASLPLDIMPGSSDPANFALPQQPLNRCLFPGS 300

Query: 315 ---------------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAP 374
                                FLGTSGQN DDL KYSEAKDKL+F+ERTLRWRHLAPTAP
Sbjct: 301 ATYNTFRSCTNPHCFELDSIRFLGTSGQNIDDLTKYSEAKDKLDFLERTLRWRHLAPTAP 360

Query: 375 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVM 432
           NTLGCYPFTDRDPFLI+SCP VYF+GNQ+K++TRL+KG EGQ+VRLI IPRFCE G AV+
Sbjct: 361 NTLGCYPFTDRDPFLIDSCPDVYFVGNQEKYETRLLKGLEGQLVRLICIPRFCETGVAVV 420

[Close]
BLAST of Cp4.1LG03g04010 vs. TAIR10
Match: AT2G42120.1 (AT2G42120.1 DNA polymerase delta small subunit)

HSP 1 Score: 666.8 bits (1719), Expect = 9.2e-192
Identity = 320/439 (72.89%), Postives = 370/439 (84.28%), Query Frame = 1 

Query: 15  MEIDSQKNLLRKQCTYEIL-DEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKP 74
           MEIDS+K   RKQ  Y  L DE+++IQKE Y+GQQYS IYF RLHLMRT+L+SL   WK 
Sbjct: 1   MEIDSEKIHERKQSDYNSLQDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKS 60

Query: 75  HLPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVL 134
           HLPV  VL LE+GKEC+IVGTL+KHMKLKP +LDEYSKERSVTPLVKPHNFMHPDD L+L
Sbjct: 61  HLPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLIL 120

Query: 135 EDDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNED 194
           ED+SGRVKL+G+ L P++Y TG++VALHGKET  G+FFV+D+LEAGLPPQIERP+   ED
Sbjct: 121 EDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQED 180

Query: 195 KYVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGL 254
           KYVV +SGL IGS S+NPLQFQLLVDHITGHLGDEEEQG+AAQIVHVVIAGNS E PR L
Sbjct: 181 KYVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKL 240

Query: 255 LNGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPG 314
           +NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+SVDIMPG +DPANF+LPQQPL+RCLFPG
Sbjct: 241 INGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPG 300

Query: 315 S---------------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTA 374
           S                     FLGTSGQN DDL KYSEAK KL+F+ERTLRWRHLAPTA
Sbjct: 301 SSPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTA 360

Query: 375 PNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAV 432
           PNTLGCYPFTDRDPFLIE+CPHVYF+GNQDK+D RLIKGSEGQ+VRLI IP+FCE G AV
Sbjct: 361 PNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAV 420

[Close]
BLAST of Cp4.1LG03g04010 vs. NCBI nr
Match: gi|659084752|ref|XP_008443055.1| (PREDICTED: DNA polymerase delta small subunit [Cucumis melo])

HSP 1 Score: 764.2 bits (1972), Expect = 1.2e-217
Identity = 377/440 (85.68%), Postives = 391/440 (88.86%), Query Frame = 1 

Query: 13  LAMEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWK 72
           + MEIDS KN+ RKQC YEI DEQYKIQKETYKGQQYSHIYF RLHLMRTILHSLVS WK
Sbjct: 1   MVMEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWK 60

Query: 73  PHLPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLV 132
           PHLPV TVL LEEGKECVIVGT+YKHMKLKPTILDEYSKERS  PLVKPHNFMHPDD+LV
Sbjct: 61  PHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLV 120

Query: 133 LEDDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNE 192
           LED+SGRVKLSG VLLPSVY TGI++ALHGKET VGDF V DILEA LPPQIERPLI +E
Sbjct: 121 LEDESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSE 180

Query: 193 DKYVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRG 252
           DKYV+FVSGLSIGSS SNPLQFQLLVDHITGHLGDE+EQGIAAQIVHVVI GNSVEIPRG
Sbjct: 181 DKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRG 240

Query: 253 LLNGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFP 312
           +LNGQHLSAKDQTKLTEPLKELDI LNQLAAGL VDIMPG SDPANFSLPQQPLHRCLFP
Sbjct: 241 ILNGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFP 300

Query: 313 GS---------------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPT 372
           GS                     FLGTSGQN DDL+KYSEAKDKLEFMERTLRWRHLAPT
Sbjct: 301 GSSAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPT 360

Query: 373 APNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTA 432
           APNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKG+EGQMVRLIAIPRFCE G A
Sbjct: 361 APNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIA 420

[Close]
BLAST of Cp4.1LG03g04010 vs. NCBI nr
Match: gi|449437575|ref|XP_004136567.1| (PREDICTED: DNA polymerase delta small subunit [Cucumis sativus])

HSP 1 Score: 759.2 bits (1959), Expect = 3.9e-216
Identity = 374/438 (85.39%), Postives = 390/438 (89.04%), Query Frame = 1 

Query: 15  MEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 74
           MEIDS  N+ RKQCTYE+ DEQYKIQKETYKGQQYSHIYF RLHLMRTILHSLVS WKPH
Sbjct: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60

Query: 75  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 134
           LPV TVL LEEGKECVIVGT+YKHMKLKPTILDEYSKERS  PLVKPHNFMHPDD+LVLE
Sbjct: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120

Query: 135 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 194
           D+SGRVKLSG VLLPSVY TGI++ALHGKET VGDF V DILEA LPPQIERPLI +EDK
Sbjct: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180

Query: 195 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGLL 254
           YV+FVSGLSIGSS SNPLQFQLLVDHITGHLGDE+EQGIAAQIVHVVI GNSVEIPRG+L
Sbjct: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240

Query: 255 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 314
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGL VDIMPG SDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300

Query: 315 ---------------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAP 374
                                FLGTSGQN DDL+KYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 375 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVM 432
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KG+EGQMVRLIAIPRFCE G AVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420

[Close]
BLAST of Cp4.1LG03g04010 vs. NCBI nr
Match: gi|731400252|ref|XP_002279533.2| (PREDICTED: DNA polymerase delta small subunit isoform X2 [Vitis vinifera])

HSP 1 Score: 708.4 bits (1827), Expect = 7.8e-201
Identity = 339/439 (77.22%), Postives = 380/439 (86.56%), Query Frame = 1 

Query: 14  AMEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKP 73
           AMEID++K+L RKQ  YE LDE+++I+KETY+GQQYS IYF RLH+MRT+++SL+  WKP
Sbjct: 3   AMEIDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKP 62

Query: 74  HLPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVL 133
           HLPV TVL LEEGKEC+IVGTLYKHMKLKP ILDEYSKERSV PLVKPHNFMH DD LVL
Sbjct: 63  HLPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVL 122

Query: 134 EDDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNED 193
           ED+SGRVKL G +LLPSVY TG +V LHGKET  G+F V DIL+A LPPQIE PL   ED
Sbjct: 123 EDESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSRED 182

Query: 194 KYVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGL 253
           KYVVFVSGLS+GSS+SNPLQFQLLVDHITGHLGDE+EQGIAAQIVHVVIAGNSV +PRGL
Sbjct: 183 KYVVFVSGLSVGSSTSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGL 242

Query: 254 LNGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPG 313
           LNGQ+L++KDQ++L+EP+KELDILL Q+AAGL +DIMPGP DPANFSLPQQPLHRCLFPG
Sbjct: 243 LNGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFPG 302

Query: 314 S---------------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTA 373
           S                     FLGTSGQN DDL+KYSEAKDKLEFMERTLRWRHLAPTA
Sbjct: 303 SSAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTA 362

Query: 374 PNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAV 432
           PNTLGCYPFTDRDPFLIESCPHVYF+GNQDK++TRLIKGSEGQ+VRLI IP+FCE G AV
Sbjct: 363 PNTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETGVAV 422

[Close]
BLAST of Cp4.1LG03g04010 vs. NCBI nr
Match: gi|297739835|emb|CBI30017.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 706.8 bits (1823), Expect = 2.3e-200
Identity = 338/438 (77.17%), Postives = 379/438 (86.53%), Query Frame = 1 

Query: 15  MEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 74
           MEID++K+L RKQ  YE LDE+++I+KETY+GQQYS IYF RLH+MRT+++SL+  WKPH
Sbjct: 1   MEIDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPH 60

Query: 75  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 134
           LPV TVL LEEGKEC+IVGTLYKHMKLKP ILDEYSKERSV PLVKPHNFMH DD LVLE
Sbjct: 61  LPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLE 120

Query: 135 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 194
           D+SGRVKL G +LLPSVY TG +V LHGKET  G+F V DIL+A LPPQIE PL   EDK
Sbjct: 121 DESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDK 180

Query: 195 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGLL 254
           YVVFVSGLS+GSS+SNPLQFQLLVDHITGHLGDE+EQGIAAQIVHVVIAGNSV +PRGLL
Sbjct: 181 YVVFVSGLSVGSSTSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGLL 240

Query: 255 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 314
           NGQ+L++KDQ++L+EP+KELDILL Q+AAGL +DIMPGP DPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFPGS 300

Query: 315 ---------------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAP 374
                                FLGTSGQN DDL+KYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 301 SAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 375 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVM 432
           NTLGCYPFTDRDPFLIESCPHVYF+GNQDK++TRLIKGSEGQ+VRLI IP+FCE G AV+
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETGVAVV 420

[Close]
BLAST of Cp4.1LG03g04010 vs. NCBI nr
Match: gi|147776498|emb|CAN71889.1| (hypothetical protein VITISV_040861 [Vitis vinifera])

HSP 1 Score: 706.1 bits (1821), Expect = 3.9e-200
Identity = 338/438 (77.17%), Postives = 378/438 (86.30%), Query Frame = 1 

Query: 15  MEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 74
           MEID++K+L RKQ  YE LDE+++I+KETY+GQQYS IYF RLH+MRT+++SL+  WKPH
Sbjct: 1   MEIDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPH 60

Query: 75  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 134
           LPV TVL LEEGKEC+IVGTLYKHMKLKP ILDEYSKERSV PLVKPHNFMH DD LVLE
Sbjct: 61  LPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLE 120

Query: 135 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 194
           D+SGRVKL G +LLPSVY TG +V LHGKET  G+F V DIL+A LPPQIE PL   EDK
Sbjct: 121 DESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDK 180

Query: 195 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGLL 254
           YVVFVSGLS+GSS SNPLQFQLLVDHITGHLGDE+EQGIAAQIVHVVIAGNSV +PRGLL
Sbjct: 181 YVVFVSGLSVGSSXSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGLL 240

Query: 255 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 314
           NGQ+L++KDQ++L+EP+KELDILL Q+AAGL +DIMPGP DPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFPGS 300

Query: 315 ---------------------FLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAP 374
                                FLGTSGQN DDL+KYSEAKDKLEFMERTLRWRHLAPTAP
Sbjct: 301 SAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 375 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVM 432
           NTLGCYPFTDRDPFLIESCPHVYF+GNQDK++TRLIKGSEGQ+VRLI IP+FCE G AV+
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETGVAVV 420

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g04010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DPOD2_ARATH6.6e-19273.06DNA polymerase delta small subunit OS=Arabidopsis thaliana GN=POLD2 PE=2 SV=2[more]
DPOD2_ORYSJ3.5e-17769.56DNA polymerase delta small subunit OS=Oryza sativa subsp. japonica GN=POLD2 PE=2... [more]
DPOD2_XENLA6.2e-8942.21DNA polymerase delta subunit 2 OS=Xenopus laevis GN=pold2 PE=2 SV=1[more]
DPOD2_MOUSE2.6e-8741.78DNA polymerase delta subunit 2 OS=Mus musculus GN=Pold2 PE=1 SV=2[more]
DPOD2_BOVIN9.9e-8741.55DNA polymerase delta subunit 2 OS=Bos taurus GN=POLD2 PE=1 SV=2[more]
BLAST of Cp4.1LG03g04010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF21_CUCSA2.7e-21685.39Uncharacterized protein OS=Cucumis sativus GN=Csa_3G807320 PE=4 SV=1[more]
F6HLJ1_VITVI5.4e-20177.22Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g06490 PE=4 SV=... [more]
A5B0L4_VITVI2.7e-20077.17Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040861 PE=4 SV=1[more]
M5W8K3_PRUPE3.4e-19576.26Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005894mg PE=4 SV=1[more]
A0A0B0N0D0_GOSAR1.3e-19475.34DNA polymerase delta small subunit-like protein OS=Gossypium arboreum GN=F383_32... [more]
BLAST of Cp4.1LG03g04010 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42120.19.2e-19272.89 DNA polymerase delta small subunit[more]
BLAST of Cp4.1LG03g04010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659084752|ref|XP_008443055.1|1.2e-21785.68PREDICTED: DNA polymerase delta small subunit [Cucumis melo][more]
gi|449437575|ref|XP_004136567.1|3.9e-21685.39PREDICTED: DNA polymerase delta small subunit [Cucumis sativus][more]
gi|731400252|ref|XP_002279533.2|7.8e-20177.22PREDICTED: DNA polymerase delta small subunit isoform X2 [Vitis vinifera][more]
gi|297739835|emb|CBI30017.3|2.3e-20077.17unnamed protein product [Vitis vinifera][more]
gi|147776498|emb|CAN71889.1|3.9e-20077.17hypothetical protein VITISV_040861 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003887DNA-directed DNA polymerase activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR024826DNA_pol_delta/II_ssu
IPR007185DNA_pol_alpha/epsilon_bsu
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008283 cell proliferation
biological_process GO:0006346 methylation-dependent chromatin silencing
biological_process GO:0006271 DNA strand elongation involved in DNA replication
biological_process GO:0006974 cellular response to DNA damage stimulus
biological_process GO:0006260 DNA replication
biological_process GO:0009909 regulation of flower development
biological_process GO:0031048 chromatin silencing by small RNA
biological_process GO:0007020 microtubule nucleation
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0048449 floral organ formation
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0006306 DNA methylation
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0071897 DNA biosynthetic process
cellular_component GO:0042575 DNA polymerase complex
cellular_component GO:0043625 delta DNA polymerase complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003887 DNA-directed DNA polymerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g04010.1Cp4.1LG03g04010.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007185DNA polymerase alpha/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 196..313
score: 3.2E-19coord: 315..386
score: 1.9
IPR024826DNA polymerase delta/II small subunit familyPANTHERPTHR10416DNA POLYMERASE DELTA SUBUNIT 2coord: 1..430
score: 4.3E