Cp4.1LG03g03360 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTACTTCAGGCTTTAGCTTACAAACTTTACCATTTTGTTATTTCCAATTTATCTTGTGATAAAAAAAAAAAAAAAAAAAAAAGACCTTGTATATATCCTTCCATAATCCGCTCCCATATTTCCATGTCAACCCGTTTATATCTGTCCCCGACAGATGAAATTAACAAACCTCTACTGTCCTGCTTACTACTGATTTTGATTCTTGGATCATCGCCTAGAGCTGCTTGAGCACTGAAATTACCATCTCTATTTATGCCGGAAAAAGTCGCACTAATTTCCGTAAACCTTAATGCACACTTGGTTGCAGTCTTGCAAATTCAACGTATTCATGATCTACACAAAAAGCCTCCACAGTTGTCCCAAGAGCAACAAGAAATTATTTTTCACATATAATTTTACAGTAATTGGTGTTTCTTTTCAGTGCTGAGAATTGGTAAGGTTTTTCTCTGATATAGTGAAGTGCCTTGTGGATTTCATTGTCACCAAGCTTCTATTTTGAAATATAGGGCACTTGACAGCAAGGAGTGATGTATACAGTTTCGGTGTTGTTCTTCTGGAGCTTTTGACAGGAAGAAAGTCTGTTGACAAGACAAAACCAAGCAAGGAGCAGAATTTAGTAGATTGGGCCCGACCTAAACTAAATGACAAGAGGAAGTTGCTACAGATAATTGACCCCAGATTGGAAAATCAATACTCGATAAGGGCAGCACAGAAGGCTTGCAGCCTAGCATACTATTGCCTGAGCCAGAACCCCAAAGCAAGACCATTAATGAGCGATGTAGTTGAAACTCTGGAACCTTTGCAGAGTGGTAACGGTGCAACTGAATACTCCTTAACGGGAACTAGTCCATTTGTGAGGGGGGGCGTCCGTGATTGCAGGATGCGGCAAAGGTTTGCCGATAATGTTGGTCCGGGGGTTAGTTGCCGGTCTGCCAACCCCAACTGTTCCCCGAGCGGCCATGCAGCATGTAGGGTTAGATGAGAATGCATCTTGGGCTTGATCTTTGCCCTTAATGAAATGAGAATGTCCACTGTAAGACGTCGTACGTTGGTGTCTTGTACATGATCGCAGTTGTAATATTTGGCCATGTGTTGTGCAGAACATTTGGAAGTGTAATTATTGTATGGACACATCGCTCTAACTTGCATCCGAAGATGCTGCCTCTCGGATGATTGATCGGCTGCATGTGTTTTTTAAAGGCCTTATGTAGGGCGTTCTTTTGTAGTTAATCTGCGTATTTCCGTGAGCCTAGGCTTCAGCAGGATCTGCTGTTTTTCTTGCCTCTACCATTCATGTATATGCGATTTTGGGATTTTGTAATTAACCTCCGACTTTATGAACGATCTTGACTTTTCTCGTCTGCCGAACATCCAGGTCAGAAACTTATTTTTATTTTATTCACTAGGTCAGAAACTTCATCAAATAACGTAA ATGGCACAGAAGGCTTGCAGCCTAGCATACTATTGCCTGAGCCAGAACCCCAAAGCAAGACCATTAATGAGCGATGTAGTTGAAACTCTGGAACCTTTGCAGAGTGGTAACGGTGCAACTGAATACTCCTTAACGGGAACTAGTCCATTTGTGAGGGGGGGCGTCCGTGATTGCAGGATGCGGCAAAGGTTTGCCGATAATGTTGGTCCGGGGGTTAGTTGCCGGTCTGCCAACCCCAACTGTTCCCCGAGCGGCCATGCAGCATGTAGGAAACTTCATCAAATAACGTAA ATGGCACAGAAGGCTTGCAGCCTAGCATACTATTGCCTGAGCCAGAACCCCAAAGCAAGACCATTAATGAGCGATGTAGTTGAAACTCTGGAACCTTTGCAGAGTGGTAACGGTGCAACTGAATACTCCTTAACGGGAACTAGTCCATTTGTGAGGGGGGGCGTCCGTGATTGCAGGATGCGGCAAAGGTTTGCCGATAATGTTGGTCCGGGGGTTAGTTGCCGGTCTGCCAACCCCAACTGTTCCCCGAGCGGCCATGCAGCATGTAGGAAACTTCATCAAATAACGTAA MAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNGATEYSLTGTSPFVRGGVRDCRMRQRFADNVGPGVSCRSANPNCSPSGHAACRKLHQIT
BLAST of Cp4.1LG03g03360 vs. Swiss-Prot
Match: Y5102_ARATH (Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.3e-26 Identity = 64/91 (70.33%), Postives = 66/91 (72.53%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. Swiss-Prot
Match: Y5564_ARATH (Probable receptor-like protein kinase At5g56460 OS=Arabidopsis thaliana GN=At5g56460 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 8.5e-07 Identity = 23/33 (69.70%), Postives = 30/33 (90.91%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. TrEMBL
Match: A0A0A0LCK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G727920 PE=3 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 2.0e-34 Identity = 74/89 (83.15%), Postives = 77/89 (86.52%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. TrEMBL
Match: B9S1V9_RICCO (Protein kinase APK1B, chloroplast, putative OS=Ricinus communis GN=RCOM_1323300 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 7.2e-29 Identity = 69/95 (72.63%), Postives = 75/95 (78.95%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. TrEMBL
Match: A0A061EFT2_THECC (Kinase superfamily protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_017868 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.0e-27 Identity = 68/97 (70.10%), Postives = 72/97 (74.23%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. TrEMBL
Match: A0A061EE73_THECC (Kinase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_017868 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.0e-27 Identity = 68/97 (70.10%), Postives = 72/97 (74.23%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. TrEMBL
Match: A0A067JDB9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00604 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.3e-27 Identity = 67/96 (69.79%), Postives = 74/96 (77.08%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. TAIR10
Match: AT5G01020.1 (AT5G01020.1 Protein kinase superfamily protein) HSP 1 Score: 120.2 bits (300), Expect = 7.1e-28 Identity = 64/91 (70.33%), Postives = 66/91 (72.53%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. TAIR10
Match: AT5G56460.1 (AT5G56460.1 Protein kinase superfamily protein) HSP 1 Score: 54.3 bits (129), Expect = 4.8e-08 Identity = 23/33 (69.70%), Postives = 30/33 (90.91%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. TAIR10
Match: AT2G07180.1 (AT2G07180.1 Protein kinase superfamily protein) HSP 1 Score: 48.9 bits (115), Expect = 2.0e-06 Identity = 24/42 (57.14%), Postives = 27/42 (64.29%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. NCBI nr
Match: gi|449439785|ref|XP_004137666.1| (PREDICTED: serine/threonine-protein kinase At5g01020 [Cucumis sativus]) HSP 1 Score: 152.9 bits (385), Expect = 2.8e-34 Identity = 74/89 (83.15%), Postives = 77/89 (86.52%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. NCBI nr
Match: gi|700203541|gb|KGN58674.1| (hypothetical protein Csa_3G727920 [Cucumis sativus]) HSP 1 Score: 152.9 bits (385), Expect = 2.8e-34 Identity = 74/89 (83.15%), Postives = 77/89 (86.52%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. NCBI nr
Match: gi|659083348|ref|XP_008442306.1| (PREDICTED: serine/threonine-protein kinase At5g01020 [Cucumis melo]) HSP 1 Score: 149.4 bits (376), Expect = 3.1e-33 Identity = 73/89 (82.02%), Postives = 76/89 (85.39%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. NCBI nr
Match: gi|223540742|gb|EEF42302.1| (Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]) HSP 1 Score: 134.4 bits (337), Expect = 1.0e-28 Identity = 69/95 (72.63%), Postives = 75/95 (78.95%), Query Frame = 1
BLAST of Cp4.1LG03g03360 vs. NCBI nr
Match: gi|1000964633|ref|XP_015575187.1| (PREDICTED: serine/threonine-protein kinase At5g01020 [Ricinus communis]) HSP 1 Score: 134.4 bits (337), Expect = 1.0e-28 Identity = 69/95 (72.63%), Postives = 75/95 (78.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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