Cp4.1LG03g03360 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG03g03360
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionKinase family protein
LocationCp4.1LG03 : 7739 .. 9174 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTACTTCAGGCTTTAGCTTACAAACTTTACCATTTTGTTATTTCCAATTTATCTTGTGATAAAAAAAAAAAAAAAAAAAAAAGACCTTGTATATATCCTTCCATAATCCGCTCCCATATTTCCATGTCAACCCGTTTATATCTGTCCCCGACAGATGAAATTAACAAACCTCTACTGTCCTGCTTACTACTGATTTTGATTCTTGGATCATCGCCTAGAGCTGCTTGAGCACTGAAATTACCATCTCTATTTATGCCGGAAAAAGTCGCACTAATTTCCGTAAACCTTAATGCACACTTGGTTGCAGTCTTGCAAATTCAACGTATTCATGATCTACACAAAAAGCCTCCACAGTTGTCCCAAGAGCAACAAGAAATTATTTTTCACATATAATTTTACAGTAATTGGTGTTTCTTTTCAGTGCTGAGAATTGGTAAGGTTTTTCTCTGATATAGTGAAGTGCCTTGTGGATTTCATTGTCACCAAGCTTCTATTTTGAAATATAGGGCACTTGACAGCAAGGAGTGATGTATACAGTTTCGGTGTTGTTCTTCTGGAGCTTTTGACAGGAAGAAAGTCTGTTGACAAGACAAAACCAAGCAAGGAGCAGAATTTAGTAGATTGGGCCCGACCTAAACTAAATGACAAGAGGAAGTTGCTACAGATAATTGACCCCAGATTGGAAAATCAATACTCGATAAGGGCAGCACAGAAGGCTTGCAGCCTAGCATACTATTGCCTGAGCCAGAACCCCAAAGCAAGACCATTAATGAGCGATGTAGTTGAAACTCTGGAACCTTTGCAGAGTGGTAACGGTGCAACTGAATACTCCTTAACGGGAACTAGTCCATTTGTGAGGGGGGGCGTCCGTGATTGCAGGATGCGGCAAAGGTTTGCCGATAATGTTGGTCCGGGGGTTAGTTGCCGGTCTGCCAACCCCAACTGTTCCCCGAGCGGCCATGCAGCATGTAGGGTTAGATGAGAATGCATCTTGGGCTTGATCTTTGCCCTTAATGAAATGAGAATGTCCACTGTAAGACGTCGTACGTTGGTGTCTTGTACATGATCGCAGTTGTAATATTTGGCCATGTGTTGTGCAGAACATTTGGAAGTGTAATTATTGTATGGACACATCGCTCTAACTTGCATCCGAAGATGCTGCCTCTCGGATGATTGATCGGCTGCATGTGTTTTTTAAAGGCCTTATGTAGGGCGTTCTTTTGTAGTTAATCTGCGTATTTCCGTGAGCCTAGGCTTCAGCAGGATCTGCTGTTTTTCTTGCCTCTACCATTCATGTATATGCGATTTTGGGATTTTGTAATTAACCTCCGACTTTATGAACGATCTTGACTTTTCTCGTCTGCCGAACATCCAGGTCAGAAACTTATTTTTATTTTATTCACTAGGTCAGAAACTTCATCAAATAACGTAA

mRNA sequence

ATGGCACAGAAGGCTTGCAGCCTAGCATACTATTGCCTGAGCCAGAACCCCAAAGCAAGACCATTAATGAGCGATGTAGTTGAAACTCTGGAACCTTTGCAGAGTGGTAACGGTGCAACTGAATACTCCTTAACGGGAACTAGTCCATTTGTGAGGGGGGGCGTCCGTGATTGCAGGATGCGGCAAAGGTTTGCCGATAATGTTGGTCCGGGGGTTAGTTGCCGGTCTGCCAACCCCAACTGTTCCCCGAGCGGCCATGCAGCATGTAGGAAACTTCATCAAATAACGTAA

Coding sequence (CDS)

ATGGCACAGAAGGCTTGCAGCCTAGCATACTATTGCCTGAGCCAGAACCCCAAAGCAAGACCATTAATGAGCGATGTAGTTGAAACTCTGGAACCTTTGCAGAGTGGTAACGGTGCAACTGAATACTCCTTAACGGGAACTAGTCCATTTGTGAGGGGGGGCGTCCGTGATTGCAGGATGCGGCAAAGGTTTGCCGATAATGTTGGTCCGGGGGTTAGTTGCCGGTCTGCCAACCCCAACTGTTCCCCGAGCGGCCATGCAGCATGTAGGAAACTTCATCAAATAACGTAA

Protein sequence

MAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNGATEYSLTGTSPFVRGGVRDCRMRQRFADNVGPGVSCRSANPNCSPSGHAACRKLHQIT
BLAST of Cp4.1LG03g03360 vs. Swiss-Prot
Match: Y5102_ARATH (Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-26
Identity = 64/91 (70.33%), Postives = 66/91 (72.53%), Query Frame = 1

Query: 2   AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNGATEYSLTGT--SPFVRGGVRDCR 61
           AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ    A     T T  + F  GGV D R
Sbjct: 318 AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCTGDALIPCATTTAGAAFAMGGVPDYR 377

Query: 62  MRQRFADNVGPGVSCRSANPNCSPSGHAACR 91
           M +RFA NVGPG  CRS NPN SP G AACR
Sbjct: 378 MHRRFAKNVGPGAICRSPNPNYSPGGPAACR 408

BLAST of Cp4.1LG03g03360 vs. Swiss-Prot
Match: Y5564_ARATH (Probable receptor-like protein kinase At5g56460 OS=Arabidopsis thaliana GN=At5g56460 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 8.5e-07
Identity = 23/33 (69.70%), Postives = 30/33 (90.91%), Query Frame = 1

Query: 3   QKACSLAYYCLSQNPKARPLMSDVVETLEPLQS 36
           QKA  LAY+CL++NPKARPLM D+V++LEPLQ+
Sbjct: 329 QKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQA 361

BLAST of Cp4.1LG03g03360 vs. TrEMBL
Match: A0A0A0LCK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G727920 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.0e-34
Identity = 74/89 (83.15%), Postives = 77/89 (86.52%), Query Frame = 1

Query: 2   AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNGATEYSLTGTSPFVRGGVRDCRMR 61
           AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGN A EYS  G +PFVRGGV D RMR
Sbjct: 447 AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNDAIEYSSMGNTPFVRGGVPDYRMR 506

Query: 62  QRFADNVGPGVSCRSANPNCSPSGHAACR 91
           QRF +NVG G SCRS NPNCSP+G AACR
Sbjct: 507 QRFINNVGSGASCRSPNPNCSPNGPAACR 535

BLAST of Cp4.1LG03g03360 vs. TrEMBL
Match: B9S1V9_RICCO (Protein kinase APK1B, chloroplast, putative OS=Ricinus communis GN=RCOM_1323300 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 7.2e-29
Identity = 69/95 (72.63%), Postives = 75/95 (78.95%), Query Frame = 1

Query: 2   AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ-SGNGATEYSLT-----GTSPFVRGGV 61
           AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ S +GATE + T     G   F  GGV
Sbjct: 334 AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCSNDGATEVTFTPTLAGGAGAFAMGGV 393

Query: 62  RDCRMRQRFADNVGPGVSCRSANPNCSPSGHAACR 91
            D RMR+RFA+NVGPG +CRS NP+CSP G AACR
Sbjct: 394 PDYRMRRRFANNVGPGANCRSPNPSCSPGGPAACR 428

BLAST of Cp4.1LG03g03360 vs. TrEMBL
Match: A0A061EFT2_THECC (Kinase superfamily protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_017868 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-27
Identity = 68/97 (70.10%), Postives = 72/97 (74.23%), Query Frame = 1

Query: 2   AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ-SGNGATEYSLT-------GTSPFVRG 61
           AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ +G  A E S +       G  PF  G
Sbjct: 307 AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCTGGSAGEVSSSLNPKLTGGAGPFAMG 366

Query: 62  GVRDCRMRQRFADNVGPGVSCRSANPNCSPSGHAACR 91
           GV D RMR RF++NVGPG  CRS NPNCSP G AACR
Sbjct: 367 GVPDYRMRHRFSNNVGPGTICRSPNPNCSPGGPAACR 403

BLAST of Cp4.1LG03g03360 vs. TrEMBL
Match: A0A061EE73_THECC (Kinase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_017868 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-27
Identity = 68/97 (70.10%), Postives = 72/97 (74.23%), Query Frame = 1

Query: 2   AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ-SGNGATEYSLT-------GTSPFVRG 61
           AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ +G  A E S +       G  PF  G
Sbjct: 328 AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCTGGSAGEVSSSLNPKLTGGAGPFAMG 387

Query: 62  GVRDCRMRQRFADNVGPGVSCRSANPNCSPSGHAACR 91
           GV D RMR RF++NVGPG  CRS NPNCSP G AACR
Sbjct: 388 GVPDYRMRHRFSNNVGPGTICRSPNPNCSPGGPAACR 424

BLAST of Cp4.1LG03g03360 vs. TrEMBL
Match: A0A067JDB9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00604 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.3e-27
Identity = 67/96 (69.79%), Postives = 74/96 (77.08%), Query Frame = 1

Query: 2   AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ-SGNGATEYS------LTGTSPFVRGG 61
           AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ S +G++E S      + G   F  GG
Sbjct: 336 AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCSNDGSSEVSPLAPTLMGGAGAFAMGG 395

Query: 62  VRDCRMRQRFADNVGPGVSCRSANPNCSPSGHAACR 91
           V D RMR+RF++NVGPG SCRS NPNCSP   AACR
Sbjct: 396 VPDYRMRRRFSNNVGPGSSCRSPNPNCSPGAPAACR 431

BLAST of Cp4.1LG03g03360 vs. TAIR10
Match: AT5G01020.1 (AT5G01020.1 Protein kinase superfamily protein)

HSP 1 Score: 120.2 bits (300), Expect = 7.1e-28
Identity = 64/91 (70.33%), Postives = 66/91 (72.53%), Query Frame = 1

Query: 2   AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNGATEYSLTGT--SPFVRGGVRDCR 61
           AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ    A     T T  + F  GGV D R
Sbjct: 318 AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCTGDALIPCATTTAGAAFAMGGVPDYR 377

Query: 62  MRQRFADNVGPGVSCRSANPNCSPSGHAACR 91
           M +RFA NVGPG  CRS NPN SP G AACR
Sbjct: 378 MHRRFAKNVGPGAICRSPNPNYSPGGPAACR 408

BLAST of Cp4.1LG03g03360 vs. TAIR10
Match: AT5G56460.1 (AT5G56460.1 Protein kinase superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 4.8e-08
Identity = 23/33 (69.70%), Postives = 30/33 (90.91%), Query Frame = 1

Query: 3   QKACSLAYYCLSQNPKARPLMSDVVETLEPLQS 36
           QKA  LAY+CL++NPKARPLM D+V++LEPLQ+
Sbjct: 329 QKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQA 361

BLAST of Cp4.1LG03g03360 vs. TAIR10
Match: AT2G07180.1 (AT2G07180.1 Protein kinase superfamily protein)

HSP 1 Score: 48.9 bits (115), Expect = 2.0e-06
Identity = 24/42 (57.14%), Postives = 27/42 (64.29%), Query Frame = 1

Query: 4   KACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNGATEYSLT 46
           K   LAY CLSQNPK RPLM+ VVE LE L+    A E  +T
Sbjct: 341 KVAGLAYQCLSQNPKGRPLMNHVVEVLETLKDDGDAQEEVMT 382

BLAST of Cp4.1LG03g03360 vs. NCBI nr
Match: gi|449439785|ref|XP_004137666.1| (PREDICTED: serine/threonine-protein kinase At5g01020 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 2.8e-34
Identity = 74/89 (83.15%), Postives = 77/89 (86.52%), Query Frame = 1

Query: 2   AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNGATEYSLTGTSPFVRGGVRDCRMR 61
           AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGN A EYS  G +PFVRGGV D RMR
Sbjct: 336 AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNDAIEYSSMGNTPFVRGGVPDYRMR 395

Query: 62  QRFADNVGPGVSCRSANPNCSPSGHAACR 91
           QRF +NVG G SCRS NPNCSP+G AACR
Sbjct: 396 QRFINNVGSGASCRSPNPNCSPNGPAACR 424

BLAST of Cp4.1LG03g03360 vs. NCBI nr
Match: gi|700203541|gb|KGN58674.1| (hypothetical protein Csa_3G727920 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 2.8e-34
Identity = 74/89 (83.15%), Postives = 77/89 (86.52%), Query Frame = 1

Query: 2   AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNGATEYSLTGTSPFVRGGVRDCRMR 61
           AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGN A EYS  G +PFVRGGV D RMR
Sbjct: 447 AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNDAIEYSSMGNTPFVRGGVPDYRMR 506

Query: 62  QRFADNVGPGVSCRSANPNCSPSGHAACR 91
           QRF +NVG G SCRS NPNCSP+G AACR
Sbjct: 507 QRFINNVGSGASCRSPNPNCSPNGPAACR 535

BLAST of Cp4.1LG03g03360 vs. NCBI nr
Match: gi|659083348|ref|XP_008442306.1| (PREDICTED: serine/threonine-protein kinase At5g01020 [Cucumis melo])

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-33
Identity = 73/89 (82.02%), Postives = 76/89 (85.39%), Query Frame = 1

Query: 2   AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNGATEYSLTGTSPFVRGGVRDCRMR 61
           AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGN A EYS  GT+PFVRGGV D RMR
Sbjct: 336 AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSGNDAIEYSSMGTTPFVRGGVPDYRMR 395

Query: 62  QRFADNVGPGVSCRSANPNCSPSGHAACR 91
           QR  +NVG G SCRS N NCSP+G AACR
Sbjct: 396 QRLINNVGSGASCRSPNSNCSPNGPAACR 424

BLAST of Cp4.1LG03g03360 vs. NCBI nr
Match: gi|223540742|gb|EEF42302.1| (Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis])

HSP 1 Score: 134.4 bits (337), Expect = 1.0e-28
Identity = 69/95 (72.63%), Postives = 75/95 (78.95%), Query Frame = 1

Query: 2   AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ-SGNGATEYSLT-----GTSPFVRGGV 61
           AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ S +GATE + T     G   F  GGV
Sbjct: 334 AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCSNDGATEVTFTPTLAGGAGAFAMGGV 393

Query: 62  RDCRMRQRFADNVGPGVSCRSANPNCSPSGHAACR 91
            D RMR+RFA+NVGPG +CRS NP+CSP G AACR
Sbjct: 394 PDYRMRRRFANNVGPGANCRSPNPSCSPGGPAACR 428

BLAST of Cp4.1LG03g03360 vs. NCBI nr
Match: gi|1000964633|ref|XP_015575187.1| (PREDICTED: serine/threonine-protein kinase At5g01020 [Ricinus communis])

HSP 1 Score: 134.4 bits (337), Expect = 1.0e-28
Identity = 69/95 (72.63%), Postives = 75/95 (78.95%), Query Frame = 1

Query: 2   AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ-SGNGATEYSLT-----GTSPFVRGGV 61
           AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ S +GATE + T     G   F  GGV
Sbjct: 334 AQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCSNDGATEVTFTPTLAGGAGAFAMGGV 393

Query: 62  RDCRMRQRFADNVGPGVSCRSANPNCSPSGHAACR 91
            D RMR+RFA+NVGPG +CRS NP+CSP G AACR
Sbjct: 394 PDYRMRRRFANNVGPGANCRSPNPSCSPGGPAACR 428

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Y5102_ARATH1.3e-2670.33Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 P... [more]
Y5564_ARATH8.5e-0769.70Probable receptor-like protein kinase At5g56460 OS=Arabidopsis thaliana GN=At5g5... [more]
Match NameE-valueIdentityDescription
A0A0A0LCK4_CUCSA2.0e-3483.15Uncharacterized protein OS=Cucumis sativus GN=Csa_3G727920 PE=3 SV=1[more]
B9S1V9_RICCO7.2e-2972.63Protein kinase APK1B, chloroplast, putative OS=Ricinus communis GN=RCOM_1323300 ... [more]
A0A061EFT2_THECC1.0e-2770.10Kinase superfamily protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_017868... [more]
A0A061EE73_THECC1.0e-2770.10Kinase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_017868 PE=3 SV=1[more]
A0A067JDB9_JATCU2.3e-2769.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00604 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G01020.17.1e-2870.33 Protein kinase superfamily protein[more]
AT5G56460.14.8e-0869.70 Protein kinase superfamily protein[more]
AT2G07180.12.0e-0657.14 Protein kinase superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449439785|ref|XP_004137666.1|2.8e-3483.15PREDICTED: serine/threonine-protein kinase At5g01020 [Cucumis sativus][more]
gi|700203541|gb|KGN58674.1|2.8e-3483.15hypothetical protein Csa_3G727920 [Cucumis sativus][more]
gi|659083348|ref|XP_008442306.1|3.1e-3382.02PREDICTED: serine/threonine-protein kinase At5g01020 [Cucumis melo][more]
gi|223540742|gb|EEF42302.1|1.0e-2872.63Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis][more]
gi|1000964633|ref|XP_015575187.1|1.0e-2872.63PREDICTED: serine/threonine-protein kinase At5g01020 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004672 protein kinase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g03360.1Cp4.1LG03g03360.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR27001FAMILY NOT NAMEDcoord: 2..72
score: 1.7
NoneNo IPR availablePANTHERPTHR27001:SF136SUBFAMILY NOT NAMEDcoord: 2..72
score: 1.7

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g03360CSPI03G30460Wild cucumber (PI 183967)cpecpiB600
Cp4.1LG03g03360MELO3C009090.2Melon (DHL92) v3.6.1cpemedB678
Cp4.1LG03g03360CsaV3_3G032930Cucumber (Chinese Long) v3cpecucB0747
Cp4.1LG03g03360Bhi11G001428Wax gourdcpewgoB0744
Cp4.1LG03g03360CsGy3G028300Cucumber (Gy14) v2cgybcpeB395
Cp4.1LG03g03360Carg01157Silver-seed gourdcarcpeB0230
The following gene(s) are paralogous to this gene:

None