Cp4.1LG03g01380 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGAGGTATAAATATAAACAGAGGAAGGGAGACAAAATAATATAAATTTACCTCAAAATGAACGAACGAACAAATCATTATGTGTTGTTTCAATGTTTTTGATTCCCCGTTGTTTGCTAAGACGACTTTTGAGAAGCATATTCGACGCATATACATATACATATAAATACATAATATATATATGTATATGTATATGTATATATATGACGTGTCAGAAAGTTCCGGTAGCTTCCAGTTTCTGCTTCGTGTCTCTGTATAAAGCCCTGAATCCGAAATCGAAATTCAAGAACAATAGAAACTGAAATGATGGAGGCAATCGACGGGAAGGAGAAGGTGACGATTCGAGACGTCAGCCACGACGAGGAAGGGATAAAGCTAATCGAGAAGACGAAGATCGACTCTCGCAACATCGACACCATTAAGTACGTCGAGAGGAAGCTCATTGACAAGGGATTCCAGCGTCTTGAACGCCAGCCGGTTCAGCCGCCGCCCAAGTCCGGCCATGGCGGCAAGTTCACTTGGGAAGGACCCCGTGATTCCATTCAGAACGAGCTCTCCCCTGCTCCGGCTGCCATTGATGAGAACGATCCGAACTATGTGGATGAAGTGAAGGAGGAGGAGGAGGTCGCCGGATTGGTGGTCGGTGAAGTGGAGGTGGCGAAGGCGGCGGAGGTCAGGGAGGGGGTTGCGAGAGTGGAGGTGGATCCTCGGCTTCAACTGCAGTGA ATGAAAGAGGTGACGATTCGAGACGTCAGCCACGACGAGGAAGGGATAAAGCTAATCGAGAAGACGAAGATCGACTCTCGCAACATCGACACCATTAAGTACGTCGAGAGGAAGCTCATTGACAAGGGATTCCAGCGTCTTGAACGCCAGCCGGTTCAGCCGCCGCCCAAGTCCGGCCATGGCGGCAAGTTCACTTGGGAAGGACCCCGTGATTCCATTCAGAACGAGCTCTCCCCTGCTCCGGCTGCCATTGATGAGAACGATCCGAACTATGTGGATGAAGTGAAGGAGGAGGAGGAGGTCGCCGGATTGGTGGTCGGTGAAGTGGAGGTGGCGAAGGCGGCGGAGGTCAGGGAGGGGGTTGCGAGAGTGGAGGTGGATCCTCGGCTTCAACTGCAGTGA ATGAAAGAGGTGACGATTCGAGACGTCAGCCACGACGAGGAAGGGATAAAGCTAATCGAGAAGACGAAGATCGACTCTCGCAACATCGACACCATTAAGTACGTCGAGAGGAAGCTCATTGACAAGGGATTCCAGCGTCTTGAACGCCAGCCGGTTCAGCCGCCGCCCAAGTCCGGCCATGGCGGCAAGTTCACTTGGGAAGGACCCCGTGATTCCATTCAGAACGAGCTCTCCCCTGCTCCGGCTGCCATTGATGAGAACGATCCGAACTATGTGGATGAAGTGAAGGAGGAGGAGGAGGTCGCCGGATTGGTGGTCGGTGAAGTGGAGGTGGCGAAGGCGGCGGAGGTCAGGGAGGGGGTTGCGAGAGTGGAGGTGGATCCTCGGCTTCAACTGCAGTGA MKEVTIRDVSHDEEGIKLIEKTKIDSRNIDTIKYVERKLIDKGFQRLERQPVQPPPKSGHGGKFTWEGPRDSIQNELSPAPAAIDENDPNYVDEVKEEEEVAGLVVGEVEVAKAAEVREGVARVEVDPRLQLQ
BLAST of Cp4.1LG03g01380 vs. TrEMBL
Match: A0A0A0LDV1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G748780 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 3.2e-43 Identity = 102/138 (73.91%), Postives = 113/138 (81.88%), Query Frame = 1
BLAST of Cp4.1LG03g01380 vs. TrEMBL
Match: M5WAT8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012775mg PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.1e-38 Identity = 92/138 (66.67%), Postives = 104/138 (75.36%), Query Frame = 1
BLAST of Cp4.1LG03g01380 vs. TrEMBL
Match: A0A0D2RX54_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G158600 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 9.0e-38 Identity = 91/140 (65.00%), Postives = 104/140 (74.29%), Query Frame = 1
BLAST of Cp4.1LG03g01380 vs. TrEMBL
Match: W9SB48_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012802 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 9.0e-38 Identity = 92/143 (64.34%), Postives = 106/143 (74.13%), Query Frame = 1
BLAST of Cp4.1LG03g01380 vs. TrEMBL
Match: A0A151TV88_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_010187 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 9.0e-38 Identity = 90/136 (66.18%), Postives = 108/136 (79.41%), Query Frame = 1
BLAST of Cp4.1LG03g01380 vs. TAIR10
Match: AT3G10020.1 (AT3G10020.1 unknown protein) HSP 1 Score: 115.9 bits (289), Expect = 1.9e-26 Identity = 72/136 (52.94%), Postives = 91/136 (66.91%), Query Frame = 1
BLAST of Cp4.1LG03g01380 vs. NCBI nr
Match: gi|659084250|ref|XP_008442790.1| (PREDICTED: uncharacterized protein LOC103486565 [Cucumis melo]) HSP 1 Score: 184.5 bits (467), Expect = 1.2e-43 Identity = 104/139 (74.82%), Postives = 114/139 (82.01%), Query Frame = 1
BLAST of Cp4.1LG03g01380 vs. NCBI nr
Match: gi|449440187|ref|XP_004137866.1| (PREDICTED: uncharacterized protein LOC101207081 [Cucumis sativus]) HSP 1 Score: 182.6 bits (462), Expect = 4.6e-43 Identity = 102/138 (73.91%), Postives = 113/138 (81.88%), Query Frame = 1
BLAST of Cp4.1LG03g01380 vs. NCBI nr
Match: gi|1009161045|ref|XP_015898684.1| (PREDICTED: uncharacterized protein LOC107432130 [Ziziphus jujuba]) HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39 Identity = 93/142 (65.49%), Postives = 109/142 (76.76%), Query Frame = 1
BLAST of Cp4.1LG03g01380 vs. NCBI nr
Match: gi|645272268|ref|XP_008241313.1| (PREDICTED: uncharacterized protein LOC103339746 [Prunus mume]) HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39 Identity = 93/138 (67.39%), Postives = 105/138 (76.09%), Query Frame = 1
BLAST of Cp4.1LG03g01380 vs. NCBI nr
Match: gi|502111688|ref|XP_004494135.1| (PREDICTED: uncharacterized protein LOC101495759 [Cicer arietinum]) HSP 1 Score: 171.0 bits (432), Expect = 1.4e-39 Identity = 92/137 (67.15%), Postives = 110/137 (80.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |