Cp4.1LG02g14540 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g14540
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pre-mRNA cleavage complex 2 protein Pcf11, putative isoform 2
Location	Cp4.1LG02 : 13862201 .. 13865228 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATACGTACATCTATACAAAGAAGTGGCGTATAATACAGAGTTATTCTGTACTAGAGAGAGAAAGGAAGAGAGGGAAAGGTGGTATTTCAGAAACCTCAGCGATGGTTTTTATTGCTTTCCCCTGATTTTGATACGTTCGAGAGCCCCAAAAAATGGCGGATAAAACCTTCCAAGTAAAGCCTTAACTTCATCTTCAACAGGGTTTTTGCAAAAATTCTCCATTCTTTCGCTTTGGCACTGTTTCTTATGAGATTACTTTTATGCATTTTTGAGTTTTGAGCTCGTTGTCTTCTTCTTCTTCTTCTTCTTCGATGGTTTTCATCCAAAACCAGGTGCTCTACTGTTTTTCCCCTTTTTAATAACTGCATTGCTGATCCATCCTTCATGTTTCTCGTTACTGTTGATCTTGATCCCTTTTTGTTCTGTGCATTTTTATGCTCTTTTGATTTTGAAGTTCGTCTTGGTTTTCGGGATTGTTTCGATGAAGAAGAACGTTTTTTATGTTTTCTTTTCGGTTTTATTTAGGTTTTCTACCAATTTGGTTTGTGCCCTAGTTTCGAAATTCTGTTGTTAATCTGATTTTTATGGTTTTCGTATTGGCTTCTTGTATGTGCTTTTGAATCTTGTGCTAGTTTATCGATCATTTTGGGAAATCTTTGACTGTTCGATTTTTTCCACTCTTGCGATTGATTTGTGGTCAGGCGAAGACGCCCGAGTAATTAGGGAATTCTGCAGGATTTTGAATCTTCTATGGAATTAACAGAACTCTTTATTTTATGCTGCGTACTTCTTTTATTAAAGTATTAATTACTTATTTTAAATTTGATCATTGTTCTTACTATACTAAAACCATTCTCCCGATTACGTTACTTCGTTGTTTCCTGATTTCCATAAAAATCTATCTTTGTTCTGTTTGATCAAAGTCCAACTCTGTTTCCGAACGTACTGCTACCAATTATGATACTTCTTACTACATTAGATTTTTGTTGAATGGATAATTTGGACCAAAATAGGGTTTATATGTAAAGTTGAGGCTATAGGATGTTTGAAAATGGATAATGAAACTTTAATACTTTATTTTTGATTGTTTTGAGTATGTAATTCACTTCCCTTCGTTTTCATCGTTCTTATTGTTGTAATAAGATACATTTGCTGCATTATTCAAAGAGGATTGTAATTGGTATCCCTTTTTGGGTGTTACTTGATGCAGCGAGAAGATCCTAAAAAATAAGCAATAATGGTCCTGGATAAGGCGATGGAAGAGTAGTTCTTGTAGAAAGAGAGAGAGATAGAGAGCATTTGATGGCTAATTCTGCTTCAGACTCCTACTTACAAGCTGTCTCATTGGGCAAACATATGAGCAGTTCTCTGTTCAGTATTCCTGGATTCTTTGCCGGGTTTGGGTCGAGAGGTTTCGTAGACAGCGATTCACTTAGAAGTCCTACGTCGCCTTTGGATTTCAGGCTTTTTTCCAATCTAAGCAACCCATTTGGTTTTAAATCCATATCATCAGCTGAATCTGAAAGTGGTCGTCAAAATAAGTTTGTTTCTAGTGAGATAGGTCTTGGCATCATAAATTCTATTGTTGTTGATGACTGTGGACCGACCAGTGAAGCCCCCGATTCGAACCCGAGGAAGAATGTAATATTTGGTCCACAAATCAAAACTAAAATCTTTAAATCGTCAACCCATTATATCAAATCTTTGGGTTCTTCTTGGAAATCTTATTCTTTGCCAAGCAATTATACAATCTCGTCACTTTCCAAAACCAAAGTTCCAAGCTCCTCTGGAGCCATAAATGGTGACTCTGCCAATGGAGAATTTTCTGCTTTAGAATCTGAACCCTTCGAACATAATGCTGGCAGCTTTTCCTCCTCTGGTATTGTTGACTTGACTCAAACTTCTGATCCAAGTGCTGAATTTTTTCCTTTGATTAACAATGGCCCTCAAGGGGAAAAGTCATTGCCCATGAAATCCTGTTCCTTGCCAATAACCATTGGAAACGATTCACATATAGCCTCTCTTTCTGCTAGAGAGATAGAACTTTCTGAAGACTATACTTGCATTATTTCTCATGGTCCAAACCCAAAGATGACGCGCATTTTTGGTGACTGTATTTTGGAATGTCAGACGGATGAAAATGTCGATTCCGGTAGGACAGATTCAGAAGAACCTGGGATCAAATCATCTCCGTTGGGAAGTTGCTCAGAAGGTTTGAGCTATGAAGCTGCTGGGAATGCGAGTTTGCGAATCTGTCACTCGTGCAGGAAAGTTTTGAAAGAAGAGCATGATATTTATCTATGGAGGTTTGTTTGATTGTCAGCACTTGTGTAACTCTTGAACTCCAAACTCCAAACTCTATCTTGATTGTCAAATTTTCCTCTTTATCAGGGATGGCAAGGCTCTCTGCAGTTCTCAATGCAGCTCTCAGGAGATTTCCGCAGAAGATAAAATCGAGAAGGGTTCGGAAGATGGCAGCGATAGCTCTGCAGCGTCGAGCTACCATGAAGATCTCTTCATCATGGGTCTCCCTTTTGCTTTATGACAATGAGTTATAGTTTCTTTTCGCACCCTCCCACAGACGTATTCAGTGAGGCGAAACGACAGGAAGAGGAGGATCATCTGTTTAGCAAGAGCTGTCTGTGTAAATCAATGAGTCTGCAGCCATGGATGATCGCAGAGCTTAGAGTTTTAATTTATTTTTTTTATCCATTTTGTGGTTTCATGGTGTTGGCGAGTCCCGAGTAGAAAGATGAGAGTTTTTGGTTGTTTATTGAAGATTTTGATCCGACTTTGTTAATCCTGGAGATCATTTTGGTGTTGTATCTCAAAGGCTTTTTTGTTAAGTTGAATAAAAGATTGTTTTGAAGAGTTGTTTAAGACAGTGTTGGAAAGTTCTCAGATTCTTTTGAACGACTTTGGAAGTTCAAAGATGTCTCAGTTTGAATGGTAGGAAGAGAAGTCCCTTGATTGGAAATATATGTTGTAAATATATGTTGTAAATATATGTTGTAAATATATGTTGT

mRNA sequence

ATATACGTACATCTATACAAAGAAGTGGCGTATAATACAGAGTTATTCTGTACTAGAGAGAGAAAGGAAGAGAGGGAAAGGTGGTATTTCAGAAACCTCAGCGATGGTTTTTATTGCTTTCCCCTGATTTTGATACGTTCGAGAGCCCCAAAAAATGGCGGATAAAACCTTCCAAGTAAAGCCTTAACTTCATCTTCAACAGGGTTTTTGCAAAAATTCTCCATTCTTTCGCTTTGGCACTGTTTCTTATGAGATTACTTTTATGCATTTTTGAGTTTTGAGCTCGTTGTCTTCTTCTTCTTCTTCTTCTTCGATGGTTTTCATCCAAAACCAGCGAGAAGATCCTAAAAAATAAGCAATAATGGTCCTGGATAAGGCGATGGAAGAGTAGTTCTTGTAGAAAGAGAGAGAGATAGAGAGCATTTGATGGCTAATTCTGCTTCAGACTCCTACTTACAAGCTGTCTCATTGGGCAAACATATGAGCAGTTCTCTGTTCAGTATTCCTGGATTCTTTGCCGGGTTTGGGTCGAGAGGTTTCGTAGACAGCGATTCACTTAGAAGTCCTACGTCGCCTTTGGATTTCAGGCTTTTTTCCAATCTAAGCAACCCATTTGGTTTTAAATCCATATCATCAGCTGAATCTGAAAGTGGTCGTCAAAATAAGTTTGTTTCTAGTGAGATAGGTCTTGGCATCATAAATTCTATTGTTGTTGATGACTGTGGACCGACCAGTGAAGCCCCCGATTCGAACCCGAGGAAGAATGTAATATTTGGTCCACAAATCAAAACTAAAATCTTTAAATCGTCAACCCATTATATCAAATCTTTGGGTTCTTCTTGGAAATCTTATTCTTTGCCAAGCAATTATACAATCTCGTCACTTTCCAAAACCAAAGTTCCAAGCTCCTCTGGAGCCATAAATGGTGACTCTGCCAATGGAGAATTTTCTGCTTTAGAATCTGAACCCTTCGAACATAATGCTGGCAGCTTTTCCTCCTCTGGTATTGTTGACTTGACTCAAACTTCTGATCCAAGTGCTGAATTTTTTCCTTTGATTAACAATGGCCCTCAAGGGGAAAAGTCATTGCCCATGAAATCCTGTTCCTTGCCAATAACCATTGGAAACGATTCACATATAGCCTCTCTTTCTGCTAGAGAGATAGAACTTTCTGAAGACTATACTTGCATTATTTCTCATGGTCCAAACCCAAAGATGACGCGCATTTTTGGTGACTGTATTTTGGAATGTCAGACGGATGAAAATGTCGATTCCGGTAGGACAGATTCAGAAGAACCTGGGATCAAATCATCTCCGTTGGGAAGTTGCTCAGAAGGTTTGAGCTATGAAGCTGCTGGGAATGCGAGTTTGCGAATCTGTCACTCGTGCAGGAAAGTTTTGAAAGAAGAGCATGATATTTATCTATGGAGGGATGGCAAGGCTCTCTGCAGTTCTCAATGCAGCTCTCAGGAGATTTCCGCAGAAGATAAAATCGAGAAGGGTTCGGAAGATGGCAGCGATAGCTCTGCAGCGTCGAGCTACCATGAAGATCTCTTCATCATGGGTCTCCCTTTTGCTTTATGACAATGAGTTATAGTTTCTTTTCGCACCCTCCCACAGACGTATTCAGTGAGGCGAAACGACAGGAAGAGGAGGATCATCTGTTTAGCAAGAGCTGTCTGTGTAAATCAATGAGTCTGCAGCCATGGATGATCGCAGAGCTTAGAGTTTTAATTTATTTTTTTTATCCATTTTGTGGTTTCATGGTGTTGGCGAGTCCCGAGTAGAAAGATGAGAGTTTTTGGTTGTTTATTGAAGATTTTGATCCGACTTTGTTAATCCTGGAGATCATTTTGGTGTTGTATCTCAAAGGCTTTTTTGTTAAGTTGAATAAAAGATTGTTTTGAAGAGTTGTTTAAGACAGTGTTGGAAAGTTCTCAGATTCTTTTGAACGACTTTGGAAGTTCAAAGATGTCTCAGTTTGAATGGTAGGAAGAGAAGTCCCTTGATTGGAAATATATGTTGTAAATATATGTTGTAAATATATGTTGTAAATATATGTTGT

Coding sequence (CDS)

ATGGCTAATTCTGCTTCAGACTCCTACTTACAAGCTGTCTCATTGGGCAAACATATGAGCAGTTCTCTGTTCAGTATTCCTGGATTCTTTGCCGGGTTTGGGTCGAGAGGTTTCGTAGACAGCGATTCACTTAGAAGTCCTACGTCGCCTTTGGATTTCAGGCTTTTTTCCAATCTAAGCAACCCATTTGGTTTTAAATCCATATCATCAGCTGAATCTGAAAGTGGTCGTCAAAATAAGTTTGTTTCTAGTGAGATAGGTCTTGGCATCATAAATTCTATTGTTGTTGATGACTGTGGACCGACCAGTGAAGCCCCCGATTCGAACCCGAGGAAGAATGTAATATTTGGTCCACAAATCAAAACTAAAATCTTTAAATCGTCAACCCATTATATCAAATCTTTGGGTTCTTCTTGGAAATCTTATTCTTTGCCAAGCAATTATACAATCTCGTCACTTTCCAAAACCAAAGTTCCAAGCTCCTCTGGAGCCATAAATGGTGACTCTGCCAATGGAGAATTTTCTGCTTTAGAATCTGAACCCTTCGAACATAATGCTGGCAGCTTTTCCTCCTCTGGTATTGTTGACTTGACTCAAACTTCTGATCCAAGTGCTGAATTTTTTCCTTTGATTAACAATGGCCCTCAAGGGGAAAAGTCATTGCCCATGAAATCCTGTTCCTTGCCAATAACCATTGGAAACGATTCACATATAGCCTCTCTTTCTGCTAGAGAGATAGAACTTTCTGAAGACTATACTTGCATTATTTCTCATGGTCCAAACCCAAAGATGACGCGCATTTTTGGTGACTGTATTTTGGAATGTCAGACGGATGAAAATGTCGATTCCGGTAGGACAGATTCAGAAGAACCTGGGATCAAATCATCTCCGTTGGGAAGTTGCTCAGAAGGTTTGAGCTATGAAGCTGCTGGGAATGCGAGTTTGCGAATCTGTCACTCGTGCAGGAAAGTTTTGAAAGAAGAGCATGATATTTATCTATGGAGGGATGGCAAGGCTCTCTGCAGTTCTCAATGCAGCTCTCAGGAGATTTCCGCAGAAGATAAAATCGAGAAGGGTTCGGAAGATGGCAGCGATAGCTCTGCAGCGTCGAGCTACCATGAAGATCTCTTCATCATGGGTCTCCCTTTTGCTTTATGA

Protein sequence

MANSASDSYLQAVSLGKHMSSSLFSIPGFFAGFGSRGFVDSDSLRSPTSPLDFRLFSNLSNPFGFKSISSAESESGRQNKFVSSEIGLGIINSIVVDDCGPTSEAPDSNPRKNVIFGPQIKTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVPSSSGAINGDSANGEFSALESEPFEHNAGSFSSSGIVDLTQTSDPSAEFFPLINNGPQGEKSLPMKSCSLPITIGNDSHIASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVDSGRTDSEEPGIKSSPLGSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCSSQCSSQEISAEDKIEKGSEDGSDSSAASSYHEDLFIMGLPFAL

Homology

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BLAST of Cp4.1LG02g14540 vs. Swiss-Prot
Match: MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana GN=MARD1 PE=2 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 1.5e-09
Identity = 39/114 (34.21%), Postives = 58/114 (50.88%), Query Frame = 1


Query: 241 LSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVDSGRTDSEEPGIKSSPLGS 300
           L+  EI+ +EDYT +ISHGPNP +T IF + +                    ++++P   
Sbjct: 165 LAVSEIDQTEDYTRVISHGPNPTITHIFDNSVF-------------------VEATP--- 224

Query: 301 CSEGLSYEAAGNAS----LRICHSCRKVLKEEHDIYLWRDGKALCSSQCSSQEI 351
           CS  L   A    S    L  C +C+K L ++ DIY++R  K  CSS+C  QE+
Sbjct: 225 CSVPLPQPAMETKSTESFLSRCFTCKKNLDQKQDIYIYRGEKGFCSSECRYQEM 256

[Close]

BLAST of Cp4.1LG02g14540 vs. TrEMBL
Match: A0A0A0LBN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G477700 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 5.5e-152
Identity = 303/404 (75.00%), Postives = 331/404 (81.93%), Query Frame = 1


Query: 1   MANSASDSYLQAVSLGKHMSSSLFSIPGFFAGFGSRGFVDSDSLRSPTSPLDFRLFSNLS 60
           MA S SDSYLQ+ SLGKH+SSSLFSIPGFFAG GS+  VDSDSLRSPTSPLDFRLFSNLS
Sbjct: 1   MAQSDSDSYLQSGSLGKHISSSLFSIPGFFAGLGSKSSVDSDSLRSPTSPLDFRLFSNLS 60

Query: 61  NPFGFKSISSAESESGRQNKFVSSEIGLGIINSIVVDDCGPTSEAPDSNPRKNVIFGPQI 120
           NPFGFKSISSAE+ESGRQNKFVSSE+GLGIINSIVVDDCG TSE  DSN RKNVIFGPQI
Sbjct: 61  NPFGFKSISSAETESGRQNKFVSSEVGLGIINSIVVDDCGTTSEPRDSNWRKNVIFGPQI 120

Query: 121 KTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVPSS-SGAINGDSANGEFSALES 180
           KTKI KSS HYIK LGSS KSYSLPSNYTISSLSK K+PSS SGAI+    NGEFSALES
Sbjct: 121 KTKISKSSNHYIKYLGSSLKSYSLPSNYTISSLSKAKIPSSNSGAIDNICGNGEFSALES 180

Query: 181 EP-------FEHNAGSFSSSGIVDLTQTSDPSAE---------FFPLINNGPQGEKSLPM 240
           EP       F  NA SFSSSGI DLTQ SDPS E          FP+INN PQ E SLP+
Sbjct: 181 EPPFENNASFLSNAASFSSSGI-DLTQNSDPSTENFPLESNNTIFPMINNSPQRENSLPI 240

Query: 241 KSCSLPITIG-NDSHIASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVD 300
           KSCSLPITIG +++++ SL+AREIELSEDYTCIISHGPNPK T IFGDCILEC TDEN+ 
Sbjct: 241 KSCSLPITIGSSNAYVGSLTAREIELSEDYTCIISHGPNPKTTHIFGDCILECHTDENI- 300

Query: 301 SGRTDSEEPGIKSSPLGSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCS 360
            G +  EEPGI+SSPLGSC EG  +    +A+L+IC+SC+KVLKEEHDIYL RDGKA CS
Sbjct: 301 -GSSTIEEPGIESSPLGSCPEGFDHGVV-DANLQICYSCKKVLKEEHDIYLCRDGKAFCS 360

Query: 361 SQCSSQEISAEDKIEKGSEDGSDSSAASSYH-EDLFIMGLPFAL 386
           SQCSS+EI  E K+ K S+D S+SSA SSYH EDLFIMGLPFAL
Sbjct: 361 SQCSSEEIFGEHKLNKTSKDDSESSAGSSYHEEDLFIMGLPFAL 400

[Close]

BLAST of Cp4.1LG02g14540 vs. TrEMBL
Match: A0A067KM84_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06258 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 5.6e-72
Identity = 184/400 (46.00%), Postives = 241/400 (60.25%), Query Frame = 1


Query: 1   MANSASDSYLQAVSLG-KHMSSSLFSIPGFFAGFGSRGFVDSDSLRSPTSPLDFRLFSNL 60
           MA+SA +S+ Q+ +LG +H SSS F++PGFF GFGSRG  +SDS+RSPTSPLDF  FSNL
Sbjct: 1   MADSAPESHCQSDALGLRHTSSSFFNLPGFFVGFGSRGSTESDSVRSPTSPLDFSFFSNL 60

Query: 61  SNPFGFKSISSAESESGRQNKFVSSEIGLGIINSIVVDDCGPTSEAPDSNPRKNVIFGPQ 120
           SNPF  KS  S  +++G Q K+ SS++GL IIN ++ D+  PTSE  +S  RKN+IFG Q
Sbjct: 61  SNPFSHKSPRSPPNQNGYQKKWDSSKVGLSIIN-LLADETKPTSEVLNSPKRKNIIFGSQ 120

Query: 121 IKTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVPSSSGAINGDSANGEFSALES 180
           +KT             G S +S SLP +Y +  LS+TK P+     +   A      ++S
Sbjct: 121 VKT-------------GYSVRSNSLPRDYMLLLLSQTKTPNFEFCKSDSDALFGNDGVQS 180

Query: 181 EPFEHNAGSFSSSGIVDLTQTSDPSAEFF------------PLI-NNGPQGEKSLPMKSC 240
           EP       F +S  + L+  S  S++ F            PLI   G Q +  L  KS 
Sbjct: 181 EP-----KPFENSSPISLSPKSPLSSKKFCSENRTTSITSLPLITGRGLQTDNPLETKSS 240

Query: 241 SLPITIG-NDSHIASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDE--NVDS 300
           S+P+ +G +  ++ SLSAREIELSEDYTCIIS+GPNPK T IFGDCILEC T+E  N D 
Sbjct: 241 SIPVPVGSSQGYVGSLSAREIELSEDYTCIISYGPNPKTTHIFGDCILECHTNELSNFDK 300

Query: 301 -GRTDSEEPGIKSSPLGSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCS 360
            G   SE P        +C EG S     +  L  C+SC+K L E  DI+++R  KA CS
Sbjct: 301 LGNLGSELP-----QEANCPEG-STPYPSDEFLSFCYSCKKKL-EGDDIHIYRGEKAFCS 360

Query: 361 SQCSSQEISAEDKIEKGSEDGSDSSAASSYHEDLFIMGLP 383
             C S+EI AED+ EK   +   SS  SSYHED+F+MG+P
Sbjct: 361 FDCRSEEIFAEDETEKTCNNSPKSSPESSYHEDVFLMGMP 374

[Close]

BLAST of Cp4.1LG02g14540 vs. TrEMBL
Match: W9RGT4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026173 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.2e-69
Identity = 177/403 (43.92%), Postives = 246/403 (61.04%), Query Frame = 1


Query: 1   MANSASDSYLQAVSLG-KHMSSSLFSIPGFFAGFGSRGFVDSDSLRSPTSPLDFRLFSNL 60
           MA+S  +S + + +LG +H+S SLFSIPGFF GFG +G  DSDS+RSPTSPLD  +FSNL
Sbjct: 6   MADSDPESEIPSDTLGLRHISGSLFSIPGFFVGFG-KGSSDSDSIRSPTSPLDIGVFSNL 65

Query: 61  SNPFGFK-SISSAESESGRQNKFVSSEIGLGIINSIVVDDCGPTSEAPDSNPRKNVIFGP 120
            NP   + + SS+ S++G Q ++  S++GLGI+NS+V D  G   + P    ++N+IFG 
Sbjct: 66  KNPANCRYARSSSLSQNGFQKEWHYSKVGLGIVNSLVDDTTGGVLDIP----KQNIIFGS 125

Query: 121 QIKTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVPSSSGAINGDSANGEFSALE 180
           Q+KT    S   Y  SL SS KS SLP+NY  S LS+TK   S         +G+   LE
Sbjct: 126 QVKTNTTNSFKDYHDSLDSSLKSKSLPTNYIASRLSQTKCLKSQLGAKNVVIDGKEVPLE 185

Query: 181 SEPFEHNAGSFSS----SGIVDLTQTSDPSAEFF-----------PLINNGPQGEKSLPM 240
           SEP+++    FS     S +V  + T +  +E F            +I    + E SL +
Sbjct: 186 SEPYKNTPLCFSDSTVPSSLVSFSYTHNLRSENFCSEAKTRMSSSLVIGTAFEVENSLSI 245

Query: 241 KSCSLPITIG-NDSHIASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVD 300
           K  ++PI IG +  ++ SLS RE+ELSEDYTCIISHGPNPK   IFGDC+LEC  +E  +
Sbjct: 246 KPSTVPIPIGPSQGYVGSLSKREMELSEDYTCIISHGPNPKTIHIFGDCVLECCANETEN 305

Query: 301 SGRTDSEEPGIKSSPLGSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCS 360
            G+   EE GIKS  + + SE L      +  L  C+SC++ L E+ DIY++R  KA CS
Sbjct: 306 FGK--KEELGIKSPQVAANSEDLG-PVHSDEVLTFCYSCKRKLVEDKDIYMYRGEKAFCS 365

Query: 361 SQCSSQEISAEDKIEKGSEDGSDSSAASSYHEDLFIMGLPFAL 386
             C   EIS +++ EK  +  + SS ASS+HEDLF++G+P A+
Sbjct: 366 FDCCLDEIS-DEETEKTDQKSARSSPASSFHEDLFLLGMPVAM 399

[Close]

BLAST of Cp4.1LG02g14540 vs. TrEMBL
Match: A0A0D2RT90_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G098700 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.7e-68
Identity = 171/385 (44.42%), Postives = 235/385 (61.04%), Query Frame = 1


Query: 1   MANSASDSYLQAVSLG-KHMSSSLFSIPGFFAGFGSRGFVDSDSLRSPTSPLDFRLFSNL 60
           MA+  S+S  ++ +LG +H+SSSLF+IPGF  GF ++G  DSD++RSPTSPLD R+F+NL
Sbjct: 6   MADPDSESIFRSDALGLRHISSSLFNIPGFLVGFSAKGSSDSDAVRSPTSPLDLRVFTNL 65

Query: 61  SNPFGFKSISSAESESGRQNKFVSSEIGLGIINSIVVDDCGPTSEAPDSNPRKNVIFGPQ 120
           SNPF  +S  S  S++G + K+  ++I LGI+N ++ D+  P  E  +   RKN+IF P+
Sbjct: 66  SNPFSVRSPQS-PSQNGYRKKWDCNKIDLGIVN-LLADENKPNGEKLEFPKRKNIIFRPR 125

Query: 121 IKTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVPSSSGAINGDSANGEFSALES 180
           +KT++  SS +  + LG+S KS SLP NY IS L + + P +    +GDS+       E 
Sbjct: 126 MKTELPCSSRYSHEFLGNSMKSNSLPRNYIISQLFQARKPETK---SGDSS--LVFGNEE 185

Query: 181 EPFEHNAGSFSSSGIVDLTQTSDPSAEFFPLINN--GPQGEKSLPMKSCSLPITIGNDSH 240
            P E    S+ S   +  TQ+SD S + F   N   G      L  K  SLP  +G+ S 
Sbjct: 186 VPLETKPDSWLSPSFIASTQSSDSSPKIFCSENRTIGINSSPQLVTKPSSLPTPLGHTS- 245

Query: 241 IASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVDSGRTDSEEPGIKSSP 300
             SLSA EIELSEDYTCIISHGPNPK TRIFGDCILEC  DE  +  +T    P      
Sbjct: 246 -GSLSAHEIELSEDYTCIISHGPNPKTTRIFGDCILECHNDELTNFDKTAELVP-----R 305

Query: 301 LGSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCSSQCSSQEISAEDKIE 360
            G  +E  S     +  L  C+SC+K  ++E DIY++R  KA CS+ C S+EI AE+++E
Sbjct: 306 FGKNTE-TSSAYPSDEFLSFCYSCKKKFEKEDDIYMYRGEKAFCSTDCRSEEIFAEEEME 365

Query: 361 KGSEDGSDSSAASSYHEDLFIMGLP 383
           K     SD S   S +EDLF++G+P
Sbjct: 366 KTGNKTSDDSPEHSDNEDLFVIGMP 375

[Close]

BLAST of Cp4.1LG02g14540 vs. TrEMBL
Match: A0A061GBF7_THECC (Pre-mRNA cleavage complex 2 protein Pcf11, putative isoform 2 OS=Theobroma cacao GN=TCM_028685 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 4.9e-68
Identity = 178/393 (45.29%), Postives = 233/393 (59.29%), Query Frame = 1


Query: 1   MANSASDSYLQAVSLG-KHMSSSLFSIPGFFAGFGSRGFVDSDSLRSPTSPLDFRLFSNL 60
           MA+  S+SY Q+ +LG +H+SSSLF+IPGF  GF ++G  DSD +RSPTSPLD R+F+N 
Sbjct: 6   MADPDSESYFQSDTLGLRHISSSLFNIPGFLVGFSTKGSSDSDMVRSPTSPLDLRVFANF 65

Query: 61  SNPFGFKSISSAESESGRQNKFVSSEIGLGIINSIVVDDCGPTSEAPDSNPRKNVIFGPQ 120
           SNPF  +S  S+ S+SG Q K+  S++GLGI+N ++ D+     E  DS  RKN+IFGPQ
Sbjct: 66  SNPFSVRSPRSS-SQSGYQKKWDCSKMGLGIVN-LLADEIKSDGEDLDSPKRKNIIFGPQ 125

Query: 121 IKTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVPSS-SGAINGDSANGEFSALE 180
           +KTK   SS +  + LG+S KS SLP NY IS LSK + P++ SG  +    N E     
Sbjct: 126 VKTKFPSSSRYSHEFLGNSMKSNSLPRNYIISQLSKDRKPNTNSGGSSLVFGNEEVPLEP 185

Query: 181 SEPFEHNAGSF---------SSSGIVDLTQTSDPSAEFFPLINNGPQGEKSLPMKSCSLP 240
                  + SF         SS        T+  ++   P I    Q + SL  K  SLP
Sbjct: 186 KSDSSRLSPSFIASTKNCNLSSRSFCSENGTTSLNSSSLP-IGRALQVDDSLLSKPSSLP 245

Query: 241 ITIGNDSHIASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVDSGRTDSE 300
           I +G+   I SLSA EIELSEDYTCIISHGPNPK T IFGDCILEC   E  +  +    
Sbjct: 246 IPVGHS--IGSLSAHEIELSEDYTCIISHGPNPKTTHIFGDCILECHNTELTNFDK--KA 305

Query: 301 EPGIKSSPLGSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCSSQCSSQE 360
           EP  K S L    E  S     +  L  C+SC+K L+++ DIY++R  KA CS  C S+E
Sbjct: 306 EPETKVSQLDKSPE-TSTPYPSDEFLSFCYSCQKKLEKDEDIYMYRGEKAFCSFDCRSEE 365

Query: 361 ISAEDKIEKGSEDGSDSSAASSYHEDLFIMGLP 383
           I AE+ +EK   +  + S   S  EDLF+MG+P
Sbjct: 366 IFAEE-MEKTCNNSFNGSPEQSDDEDLFLMGMP 389

[Close]

BLAST of Cp4.1LG02g14540 vs. TAIR10
Match: AT5G11460.1 (AT5G11460.1 Protein of unknown function (DUF581))

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-27
Identity = 120/375 (32.00%), Postives = 171/375 (45.60%), Query Frame = 1


Query: 4   SASDSYLQAVSLGKHMSSSLFSIPGFFAGFGSRGFVDSDSLRSPTSPLDFRLFSNLSNPF 63
           +ASD Y     L    S  L S     + F  +   D +S  SPTSPLDFRLFS L NPF
Sbjct: 11  TASDYYSTKPVLSAIRSHKLIS-----SVFEGKCPSDYESAWSPTSPLDFRLFSTLGNPF 70

Query: 64  GFKSISSAESESGRQNKFVSSEIGLGIINSIVVD---DCGPTSEAPDSNPRKNVIFGPQI 123
              + SS     G+Q  + S ++GL I++S+V D   D   T   P S   KN+IFG  +
Sbjct: 71  A--ASSSRSIWRGKQRSWDSGKVGLSIVHSLVDDHHTDSSATIVLP-SPDSKNIIFGSLM 130

Query: 124 KTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVPSSSGAINGDSANGEFSALESE 183
           +               S  K + L   +T + + K  +P++   I  D        LE  
Sbjct: 131 R---------------SGQKPHLLSQPFTKALMPKDVIPNAVFEIGHD----VIDVLE-- 190

Query: 184 PFEHNAGSFSSSGIVDLTQTSDPSAEFFPLINNGPQGEKSLPMKSCSLPITIGNDSHIAS 243
                      SG VD    S   AE F + NN  Q  K  P       +  G +S    
Sbjct: 191 --------LRKSGSVDAAYCS--GAENFSVNNNACQVTKQDPGS-----LNGGTES---- 250

Query: 244 LSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVDSGRTDSEEPGIKS-SPLG 303
               ++E+SEDYTC+ISHGPNPK T  +GD ++E    E + +    +E+  I + +PL 
Sbjct: 251 ----DMEISEDYTCVISHGPNPKTTHFYGDQVMESVEREELKNRCCKNEKESIFAVAPLD 310

Query: 304 SCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCSSQCSSQEISAEDKIEKG 363
             +            L  C+ C K L    DIY++   KA CSS+C S+EI  ++++E G
Sbjct: 311 LTTP--VDVLPPKDFLSFCYGCSKKLGMGEDIYMYSGYKAFCSSECRSKEIDLDEEMEDG 331

Query: 364 SEDGSDSSAASSYHE 375
            E+ +  S +SS  E
Sbjct: 371 DEEEAIKSVSSSDKE 331

[Close]

BLAST of Cp4.1LG02g14540 vs. TAIR10
Match: AT2G25690.1 (AT2G25690.1 Protein of unknown function (DUF581))

HSP 1 Score: 90.5 bits (223), Expect = 2.4e-18
Identity = 91/318 (28.62%), Postives = 150/318 (47.17%), Query Frame = 1


Query: 40  DSDSLRSPTSPLDFRLFSNLSNPFGFKSISSAESESGRQNKFVSSEIGLGIINSIVVDDC 99
           DSD +RSP SPL+FR+ S +++ F  +S  S+ +         ++++GL I++S+  D C
Sbjct: 56  DSDFVRSPKSPLEFRVLSTMADSFFLRSPRSSLTAHLNCCCGPAAKVGLSIVDSLGDDRC 115

Query: 100 GPTSEAPDSNPRKNVIFGPQIKTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVP 159
                 PD      ++FGP ++ K  +    + K L            + +++ SK    
Sbjct: 116 ----LLPD------IVFGPALRIKCSEVMDKHPKLL------------FPVANKSKKIEN 175

Query: 160 SSSGAIN--GDSANGEFSALESEPFEHNAGSFSSSGIVDLTQTSDPSAEFFPLINNGPQG 219
             SG +   GD+++      E+EP      SFS++  +  T+    S         G +G
Sbjct: 176 ERSGVVFEIGDNSS------ETEPVGLRNRSFSANDCLRKTRVLSRS-------KLGQEG 235

Query: 220 EKSLPMKSCSLPITIGNDSHIASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQT 279
           +              G+ S  A  S  ++   EDYTCII+HGPNPK T I+GD +LEC  
Sbjct: 236 DFP------------GSGSDNAFSSEDDM---EDYTCIIAHGPNPKTTHIYGDRVLECHK 295

Query: 280 DENVDSGRTDSEEPGIKSSPLGSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDG 339
           +E    G  D++E        GS     ++       L IC+ C K L    DIY++R+ 
Sbjct: 296 NEL--KGDEDNKE------KFGSVFPSDNF-------LGICNFCNKKLGGGDDIYMYRE- 307

Query: 340 KALCSSQCSSQEISAEDK 356
           K+ CS +C S+E+  +++
Sbjct: 356 KSFCSEECRSEEMMIDEE 307

[Close]

BLAST of Cp4.1LG02g14540 vs. TAIR10
Match: AT3G22550.1 (AT3G22550.1 Protein of unknown function (DUF581))

HSP 1 Score: 72.8 bits (177), Expect = 5.2e-13
Identity = 41/117 (35.04%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 243 AREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVDSGRTDSEEPGI----KSSPL 302
           A ++ELSEDYTC+  HGPNP+   IF +CI+E Q              PG+     S P+
Sbjct: 164 ASDMELSEDYTCVTCHGPNPRTIHIFDNCIVESQ--------------PGVVFFRSSDPV 223

Query: 303 GSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCSSQCSSQEISAEDK 356
              +E  S  +  ++ L  C +C+K L    DI+++R  +A CSS+C S E+   ++
Sbjct: 224 ---NESDSDYSPPDSFLSCCCNCKKSLGPRDDIFMYRGDRAFCSSECRSIEMMMSEE 263

[Close]

BLAST of Cp4.1LG02g14540 vs. TAIR10
Match: AT1G79970.1 (AT1G79970.1 unknown protein)

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-12
Identity = 45/115 (39.13%), Postives = 59/115 (51.30%), Query Frame = 1


Query: 177 LESEPFEHNAGSFSSSGIVDLTQTSDPSAEFFP--LINNGPQGEKSLPMKSCSLPITIGN 236
           L  +PF  +    +    V+   T+ P     P  ++    +   S PM   S       
Sbjct: 87  LGDDPFRRDYIVLAPQVKVNNVNTATPKLSSDPCVIVEEPRRSSSSSPMDIIS------- 146

Query: 237 DSHIASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVDSGRTDSE 290
            ++  SLS RE+ LSEDYTCIISHGPNPK T IFGDCIL+C   +  D G+ D E
Sbjct: 147 -TYSRSLSGREMALSEDYTCIISHGPNPKTTYIFGDCILDC---DPKDLGKEDIE 190

[Close]

BLAST of Cp4.1LG02g14540 vs. TAIR10
Match: AT3G63210.1 (AT3G63210.1 Protein of unknown function (DUF581))

HSP 1 Score: 65.5 bits (158), Expect = 8.4e-11
Identity = 39/114 (34.21%), Postives = 58/114 (50.88%), Query Frame = 1


Query: 241 LSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVDSGRTDSEEPGIKSSPLGS 300
           L+  EI+ +EDYT +ISHGPNP +T IF + +                    ++++P   
Sbjct: 165 LAVSEIDQTEDYTRVISHGPNPTITHIFDNSVF-------------------VEATP--- 224

Query: 301 CSEGLSYEAAGNAS----LRICHSCRKVLKEEHDIYLWRDGKALCSSQCSSQEI 351
           CS  L   A    S    L  C +C+K L ++ DIY++R  K  CSS+C  QE+
Sbjct: 225 CSVPLPQPAMETKSTESFLSRCFTCKKNLDQKQDIYIYRGEKGFCSSECRYQEM 256

[Close]

BLAST of Cp4.1LG02g14540 vs. NCBI nr
Match: gi|449466977|ref|XP_004151202.1| (PREDICTED: uncharacterized protein LOC101221258 [Cucumis sativus])

HSP 1 Score: 545.4 bits (1404), Expect = 7.8e-152
Identity = 303/404 (75.00%), Postives = 331/404 (81.93%), Query Frame = 1


Query: 1   MANSASDSYLQAVSLGKHMSSSLFSIPGFFAGFGSRGFVDSDSLRSPTSPLDFRLFSNLS 60
           MA S SDSYLQ+ SLGKH+SSSLFSIPGFFAG GS+  VDSDSLRSPTSPLDFRLFSNLS
Sbjct: 1   MAQSDSDSYLQSGSLGKHISSSLFSIPGFFAGLGSKSSVDSDSLRSPTSPLDFRLFSNLS 60

Query: 61  NPFGFKSISSAESESGRQNKFVSSEIGLGIINSIVVDDCGPTSEAPDSNPRKNVIFGPQI 120
           NPFGFKSISSAE+ESGRQNKFVSSE+GLGIINSIVVDDCG TSE  DSN RKNVIFGPQI
Sbjct: 61  NPFGFKSISSAETESGRQNKFVSSEVGLGIINSIVVDDCGTTSEPRDSNWRKNVIFGPQI 120

Query: 121 KTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVPSS-SGAINGDSANGEFSALES 180
           KTKI KSS HYIK LGSS KSYSLPSNYTISSLSK K+PSS SGAI+    NGEFSALES
Sbjct: 121 KTKISKSSNHYIKYLGSSLKSYSLPSNYTISSLSKAKIPSSNSGAIDNICGNGEFSALES 180

Query: 181 EP-------FEHNAGSFSSSGIVDLTQTSDPSAE---------FFPLINNGPQGEKSLPM 240
           EP       F  NA SFSSSGI DLTQ SDPS E          FP+INN PQ E SLP+
Sbjct: 181 EPPFENNASFLSNAASFSSSGI-DLTQNSDPSTENFPLESNNTIFPMINNSPQRENSLPI 240

Query: 241 KSCSLPITIG-NDSHIASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVD 300
           KSCSLPITIG +++++ SL+AREIELSEDYTCIISHGPNPK T IFGDCILEC TDEN+ 
Sbjct: 241 KSCSLPITIGSSNAYVGSLTAREIELSEDYTCIISHGPNPKTTHIFGDCILECHTDENI- 300

Query: 301 SGRTDSEEPGIKSSPLGSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCS 360
            G +  EEPGI+SSPLGSC EG  +    +A+L+IC+SC+KVLKEEHDIYL RDGKA CS
Sbjct: 301 -GSSTIEEPGIESSPLGSCPEGFDHGVV-DANLQICYSCKKVLKEEHDIYLCRDGKAFCS 360

Query: 361 SQCSSQEISAEDKIEKGSEDGSDSSAASSYH-EDLFIMGLPFAL 386
           SQCSS+EI  E K+ K S+D S+SSA SSYH EDLFIMGLPFAL
Sbjct: 361 SQCSSEEIFGEHKLNKTSKDDSESSAGSSYHEEDLFIMGLPFAL 400

[Close]

BLAST of Cp4.1LG02g14540 vs. NCBI nr
Match: gi|659093346|ref|XP_008447495.1| (PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo])

HSP 1 Score: 542.7 bits (1397), Expect = 5.1e-151
Identity = 303/404 (75.00%), Postives = 330/404 (81.68%), Query Frame = 1


Query: 1   MANSASDSYLQAVSLGKHMSSSLFSIPGFFAGFGSRGFVDSDSLRSPTSPLDFRLFSNLS 60
           MA S SDSYLQ+ SLGKH+SSSLFSIPGFFAG GS+  V+SDSLRSPTSPLDFRLFSNLS
Sbjct: 1   MAQSDSDSYLQSGSLGKHISSSLFSIPGFFAGLGSKSLVESDSLRSPTSPLDFRLFSNLS 60

Query: 61  NPFGFKSISSAESESGRQNKFVSSEIGLGIINSIVVDDCGPTSEAPDSNPRKNVIFGPQI 120
           NPFGFKSISSAE+ESGRQNKFVSSE+GLGIINSIVVDDCG TSEA DSN RKNVIFGPQI
Sbjct: 61  NPFGFKSISSAETESGRQNKFVSSEVGLGIINSIVVDDCGTTSEARDSNWRKNVIFGPQI 120

Query: 121 KTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVPSS-SGAINGDSANGEFSALES 180
           KTKI KSS HYIK LGSS KSYSLPSNYTISSLSK K+PSS SGA +    NGEFSALES
Sbjct: 121 KTKISKSSNHYIKYLGSSLKSYSLPSNYTISSLSKAKIPSSNSGATDSVCGNGEFSALES 180

Query: 181 EP-------FEHNAGSFSSSGIVDLTQTSDPSAE---------FFPLINNGPQGEKSLPM 240
           EP       F  NA SFSSSGI DLTQ SDPS E          FP+INN PQ E SLP+
Sbjct: 181 EPPFENNASFLSNAASFSSSGI-DLTQNSDPSTENFPLESNNTIFPMINNSPQRENSLPI 240

Query: 241 KSCSLPITIG-NDSHIASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVD 300
           KSCSLPITIG +++++ SL+AREIELSEDYTCIISHGPNPK T IFGDCILEC TDEN+ 
Sbjct: 241 KSCSLPITIGSSNAYVGSLTAREIELSEDYTCIISHGPNPKTTHIFGDCILECHTDENI- 300

Query: 301 SGRTDSEEPGIKSSPLGSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCS 360
            G +  EEPG +SS LGSC EG  +    +A+L+IC+SC+KVLKEEHDIYL RDGKA CS
Sbjct: 301 -GSSTMEEPGTESSLLGSCPEGFGHGVV-DANLQICYSCKKVLKEEHDIYLCRDGKAFCS 360

Query: 361 SQCSSQEISAEDKIEKGSEDGSDSSAASSYH-EDLFIMGLPFAL 386
           SQCSSQEI  E KI K S+D S+SSAASSYH EDLFIMGLPFAL
Sbjct: 361 SQCSSQEIFGEHKINKTSKDDSESSAASSYHEEDLFIMGLPFAL 400

[Close]

BLAST of Cp4.1LG02g14540 vs. NCBI nr
Match: gi|802603900|ref|XP_012073329.1| (PREDICTED: uncharacterized protein LOC105634966 [Jatropha curcas])

HSP 1 Score: 279.6 bits (714), Expect = 8.0e-72
Identity = 184/400 (46.00%), Postives = 241/400 (60.25%), Query Frame = 1


Query: 1   MANSASDSYLQAVSLG-KHMSSSLFSIPGFFAGFGSRGFVDSDSLRSPTSPLDFRLFSNL 60
           MA+SA +S+ Q+ +LG +H SSS F++PGFF GFGSRG  +SDS+RSPTSPLDF  FSNL
Sbjct: 1   MADSAPESHCQSDALGLRHTSSSFFNLPGFFVGFGSRGSTESDSVRSPTSPLDFSFFSNL 60

Query: 61  SNPFGFKSISSAESESGRQNKFVSSEIGLGIINSIVVDDCGPTSEAPDSNPRKNVIFGPQ 120
           SNPF  KS  S  +++G Q K+ SS++GL IIN ++ D+  PTSE  +S  RKN+IFG Q
Sbjct: 61  SNPFSHKSPRSPPNQNGYQKKWDSSKVGLSIIN-LLADETKPTSEVLNSPKRKNIIFGSQ 120

Query: 121 IKTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVPSSSGAINGDSANGEFSALES 180
           +KT             G S +S SLP +Y +  LS+TK P+     +   A      ++S
Sbjct: 121 VKT-------------GYSVRSNSLPRDYMLLLLSQTKTPNFEFCKSDSDALFGNDGVQS 180

Query: 181 EPFEHNAGSFSSSGIVDLTQTSDPSAEFF------------PLI-NNGPQGEKSLPMKSC 240
           EP       F +S  + L+  S  S++ F            PLI   G Q +  L  KS 
Sbjct: 181 EP-----KPFENSSPISLSPKSPLSSKKFCSENRTTSITSLPLITGRGLQTDNPLETKSS 240

Query: 241 SLPITIG-NDSHIASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDE--NVDS 300
           S+P+ +G +  ++ SLSAREIELSEDYTCIIS+GPNPK T IFGDCILEC T+E  N D 
Sbjct: 241 SIPVPVGSSQGYVGSLSAREIELSEDYTCIISYGPNPKTTHIFGDCILECHTNELSNFDK 300

Query: 301 -GRTDSEEPGIKSSPLGSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCS 360
            G   SE P        +C EG S     +  L  C+SC+K L E  DI+++R  KA CS
Sbjct: 301 LGNLGSELP-----QEANCPEG-STPYPSDEFLSFCYSCKKKL-EGDDIHIYRGEKAFCS 360

Query: 361 SQCSSQEISAEDKIEKGSEDGSDSSAASSYHEDLFIMGLP 383
             C S+EI AED+ EK   +   SS  SSYHED+F+MG+P
Sbjct: 361 FDCRSEEIFAEDETEKTCNNSPKSSPESSYHEDVFLMGMP 374

[Close]

BLAST of Cp4.1LG02g14540 vs. NCBI nr
Match: gi|703104569|ref|XP_010098043.1| (hypothetical protein L484_026173 [Morus notabilis])

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 177/403 (43.92%), Postives = 246/403 (61.04%), Query Frame = 1


Query: 1   MANSASDSYLQAVSLG-KHMSSSLFSIPGFFAGFGSRGFVDSDSLRSPTSPLDFRLFSNL 60
           MA+S  +S + + +LG +H+S SLFSIPGFF GFG +G  DSDS+RSPTSPLD  +FSNL
Sbjct: 6   MADSDPESEIPSDTLGLRHISGSLFSIPGFFVGFG-KGSSDSDSIRSPTSPLDIGVFSNL 65

Query: 61  SNPFGFK-SISSAESESGRQNKFVSSEIGLGIINSIVVDDCGPTSEAPDSNPRKNVIFGP 120
            NP   + + SS+ S++G Q ++  S++GLGI+NS+V D  G   + P    ++N+IFG 
Sbjct: 66  KNPANCRYARSSSLSQNGFQKEWHYSKVGLGIVNSLVDDTTGGVLDIP----KQNIIFGS 125

Query: 121 QIKTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVPSSSGAINGDSANGEFSALE 180
           Q+KT    S   Y  SL SS KS SLP+NY  S LS+TK   S         +G+   LE
Sbjct: 126 QVKTNTTNSFKDYHDSLDSSLKSKSLPTNYIASRLSQTKCLKSQLGAKNVVIDGKEVPLE 185

Query: 181 SEPFEHNAGSFSS----SGIVDLTQTSDPSAEFF-----------PLINNGPQGEKSLPM 240
           SEP+++    FS     S +V  + T +  +E F            +I    + E SL +
Sbjct: 186 SEPYKNTPLCFSDSTVPSSLVSFSYTHNLRSENFCSEAKTRMSSSLVIGTAFEVENSLSI 245

Query: 241 KSCSLPITIG-NDSHIASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVD 300
           K  ++PI IG +  ++ SLS RE+ELSEDYTCIISHGPNPK   IFGDC+LEC  +E  +
Sbjct: 246 KPSTVPIPIGPSQGYVGSLSKREMELSEDYTCIISHGPNPKTIHIFGDCVLECCANETEN 305

Query: 301 SGRTDSEEPGIKSSPLGSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCS 360
            G+   EE GIKS  + + SE L      +  L  C+SC++ L E+ DIY++R  KA CS
Sbjct: 306 FGK--KEELGIKSPQVAANSEDLG-PVHSDEVLTFCYSCKRKLVEDKDIYMYRGEKAFCS 365

Query: 361 SQCSSQEISAEDKIEKGSEDGSDSSAASSYHEDLFIMGLPFAL 386
             C   EIS +++ EK  +  + SS ASS+HEDLF++G+P A+
Sbjct: 366 FDCCLDEIS-DEETEKTDQKSARSSPASSFHEDLFLLGMPVAM 399

[Close]

BLAST of Cp4.1LG02g14540 vs. NCBI nr
Match: gi|823171714|ref|XP_012484893.1| (PREDICTED: uncharacterized protein LOC105799083 [Gossypium raimondii])

HSP 1 Score: 266.9 bits (681), Expect = 5.4e-68
Identity = 171/385 (44.42%), Postives = 235/385 (61.04%), Query Frame = 1


Query: 1   MANSASDSYLQAVSLG-KHMSSSLFSIPGFFAGFGSRGFVDSDSLRSPTSPLDFRLFSNL 60
           MA+  S+S  ++ +LG +H+SSSLF+IPGF  GF ++G  DSD++RSPTSPLD R+F+NL
Sbjct: 6   MADPDSESIFRSDALGLRHISSSLFNIPGFLVGFSAKGSSDSDAVRSPTSPLDLRVFTNL 65

Query: 61  SNPFGFKSISSAESESGRQNKFVSSEIGLGIINSIVVDDCGPTSEAPDSNPRKNVIFGPQ 120
           SNPF  +S  S  S++G + K+  ++I LGI+N ++ D+  P  E  +   RKN+IF P+
Sbjct: 66  SNPFSVRSPQS-PSQNGYRKKWDCNKIDLGIVN-LLADENKPNGEKLEFPKRKNIIFRPR 125

Query: 121 IKTKIFKSSTHYIKSLGSSWKSYSLPSNYTISSLSKTKVPSSSGAINGDSANGEFSALES 180
           +KT++  SS +  + LG+S KS SLP NY IS L + + P +    +GDS+       E 
Sbjct: 126 MKTELPCSSRYSHEFLGNSMKSNSLPRNYIISQLFQARKPETK---SGDSS--LVFGNEE 185

Query: 181 EPFEHNAGSFSSSGIVDLTQTSDPSAEFFPLINN--GPQGEKSLPMKSCSLPITIGNDSH 240
            P E    S+ S   +  TQ+SD S + F   N   G      L  K  SLP  +G+ S 
Sbjct: 186 VPLETKPDSWLSPSFIASTQSSDSSPKIFCSENRTIGINSSPQLVTKPSSLPTPLGHTS- 245

Query: 241 IASLSAREIELSEDYTCIISHGPNPKMTRIFGDCILECQTDENVDSGRTDSEEPGIKSSP 300
             SLSA EIELSEDYTCIISHGPNPK TRIFGDCILEC  DE  +  +T    P      
Sbjct: 246 -GSLSAHEIELSEDYTCIISHGPNPKTTRIFGDCILECHNDELTNFDKTAELVP-----R 305

Query: 301 LGSCSEGLSYEAAGNASLRICHSCRKVLKEEHDIYLWRDGKALCSSQCSSQEISAEDKIE 360
            G  +E  S     +  L  C+SC+K  ++E DIY++R  KA CS+ C S+EI AE+++E
Sbjct: 306 FGKNTE-TSSAYPSDEFLSFCYSCKKKFEKEDDIYMYRGEKAFCSTDCRSEEIFAEEEME 365

Query: 361 KGSEDGSDSSAASSYHEDLFIMGLP 383
           K     SD S   S +EDLF++G+P
Sbjct: 366 KTGNKTSDDSPEHSDNEDLFVIGMP 375

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g14540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MARD1_ARATH	1.5e-09	34.21	Protein MARD1 OS=Arabidopsis thaliana GN=MARD1 PE=2 SV=2	[more]

BLAST of Cp4.1LG02g14540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBN9_CUCSA	5.5e-152	75.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G477700 PE=4 SV=1	[more]
A0A067KM84_JATCU	5.6e-72	46.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06258 PE=4 SV=1	[more]
W9RGT4_9ROSA	1.2e-69	43.92	Uncharacterized protein OS=Morus notabilis GN=L484_026173 PE=4 SV=1	[more]
A0A0D2RT90_GOSRA	3.7e-68	44.42	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G098700 PE=4 SV=1	[more]
A0A061GBF7_THECC	4.9e-68	45.29	Pre-mRNA cleavage complex 2 protein Pcf11, putative isoform 2 OS=Theobroma cacao...	[more]

BLAST of Cp4.1LG02g14540 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11460.1	1.3e-27	32.00	Protein of unknown function (DUF581)	[more]
AT2G25690.1	2.4e-18	28.62	Protein of unknown function (DUF581)	[more]
AT3G22550.1	5.2e-13	35.04	Protein of unknown function (DUF581)	[more]
AT1G79970.1	2.0e-12	39.13	unknown protein	[more]
AT3G63210.1	8.4e-11	34.21	Protein of unknown function (DUF581)	[more]

BLAST of Cp4.1LG02g14540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449466977\|ref\|XP_004151202.1\|	7.8e-152	75.00	PREDICTED: uncharacterized protein LOC101221258 [Cucumis sativus]	[more]
gi\|659093346\|ref\|XP_008447495.1\|	5.1e-151	75.00	PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo]	[more]
gi\|802603900\|ref\|XP_012073329.1\|	8.0e-72	46.00	PREDICTED: uncharacterized protein LOC105634966 [Jatropha curcas]	[more]
gi\|703104569\|ref\|XP_010098043.1\|	1.7e-69	43.92	hypothetical protein L484_026173 [Morus notabilis]	[more]
gi\|823171714\|ref\|XP_012484893.1\|	5.4e-68	44.42	PREDICTED: uncharacterized protein LOC105799083 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007650	Zf-FLZ_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g14540.1	Cp4.1LG02g14540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 312..354 score: 1.7
None	No IPR available	PANTHER	PTHR33059	FAMILY NOT NAMED	coord: 205..358 score: 6.8E-77coord: 1..127 score: 6.8
None	No IPR available	PANTHER	PTHR33059:SF16	SUBFAMILY NOT NAMED	coord: 205..358 score: 6.8E-77coord: 1..127 score: 6.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG02g14540	CmaCh14G013160	Cucurbita maxima (Rimu)	cmacpeB282
Cp4.1LG02g14540	CmaCh01G001160	Cucurbita maxima (Rimu)	cmacpeB491
Cp4.1LG02g14540	CmoCh14G013510	Cucurbita moschata (Rifu)	cmocpeB244
Cp4.1LG02g14540	CmoCh01G001230	Cucurbita moschata (Rifu)	cmocpeB449
Cp4.1LG02g14540	Cla012682	Watermelon (97103) v1	cpewmB557
Cp4.1LG02g14540	Csa3G477700	Cucumber (Chinese Long) v2	cpecuB552
Cp4.1LG02g14540	MELO3C012956	Melon (DHL92) v3.5.1	cpemeB518
Cp4.1LG02g14540	ClCG07G013020	Watermelon (Charleston Gray)	cpewcgB524
Cp4.1LG02g14540	CSPI03G24100	Wild cucumber (PI 183967)	cpecpiB554
Cp4.1LG02g14540	Lsi07G004970	Bottle gourd (USVL1VR-Ls)	cpelsiB472
Cp4.1LG02g14540	MELO3C011209.2	Melon (DHL92) v3.6.1	cpemedB608
Cp4.1LG02g14540	MELO3C012956.2	Melon (DHL92) v3.6.1	cpemedB616
Cp4.1LG02g14540	CsaV3_3G025160	Cucumber (Chinese Long) v3	cpecucB0696
Cp4.1LG02g14540	CsaV3_2G031580	Cucumber (Chinese Long) v3	cpecucB0677
Cp4.1LG02g14540	Bhi01G002655	Wax gourd	cpewgoB0680
Cp4.1LG02g14540	CsGy3G023160	Cucumber (Gy14) v2	cgybcpeB390
Cp4.1LG02g14540	Carg04254	Silver-seed gourd	carcpeB0285
Cp4.1LG02g14540	Carg06488	Silver-seed gourd	carcpeB0175

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG02g14540	Cp4.1LG03g14000	Cucurbita pepo (Zucchini)	cpecpeB451

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG02g14540	Cucumber (Gy14) v2	cgybcpeB947
Cp4.1LG02g14540	Melon (DHL92) v3.6.1	cpemedB593
Cp4.1LG02g14540	Melon (DHL92) v3.6.1	cpemedB626
Cp4.1LG02g14540	Silver-seed gourd	carcpeB0813
Cp4.1LG02g14540	Silver-seed gourd	carcpeB1053
Cp4.1LG02g14540	Silver-seed gourd	carcpeB1429
Cp4.1LG02g14540	Cucumber (Chinese Long) v3	cpecucB0728
Cp4.1LG02g14540	Cucurbita pepo (Zucchini)	cpecpeB181
Cp4.1LG02g14540	Cucurbita pepo (Zucchini)	cpecpeB332
Cp4.1LG02g14540	Cucurbita maxima (Rimu)	cmacpeB399
Cp4.1LG02g14540	Cucurbita maxima (Rimu)	cmacpeB921
Cp4.1LG02g14540	Cucurbita moschata (Rifu)	cmocpeB361
Cp4.1LG02g14540	Wild cucumber (PI 183967)	cpecpiB563
Cp4.1LG02g14540	Wild cucumber (PI 183967)	cpecpiB589
Cp4.1LG02g14540	Cucumber (Chinese Long) v2	cpecuB588
Cp4.1LG02g14540	Bottle gourd (USVL1VR-Ls)	cpelsiB442
Cp4.1LG02g14540	Watermelon (Charleston Gray)	cpewcgB483
Cp4.1LG02g14540	Watermelon (97103) v1	cpewmB536
Cp4.1LG02g14540	Melon (DHL92) v3.5.1	cpemeB501