Cp4.1LG02g13870 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g13870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPollen Ole e 1 allergen and extensin family protein
LocationCp4.1LG02 : 12192499 .. 12193691 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGATGAGATGAGACCCAACAGAAAAAAGAAAGAAACTTGTGTGGTTCTTCTACTTGTCCCGTGAACCAACGAAGTCCTTCTCCTCTCTGTTTTGCATTTACTTCTTCTAGTTCGCAGTTCACACTAACTTTTGGCCTGAAACTCATAAATAACAACTCCAGCCTTGCCGTTTTAGTGCTTTTAATATCTATCTTCCCATTTCAGAGATTCCAGAAGAGTTGAAAGAAGACAAAGATATGAGAATTTAGACAAGGAAAGATAGTAAGAGGGTTCATGATATTATTTGTCATTAAATTCTTGTTTTAAAGGGGTTTTTTCTTCGAGTATGGTCTGGTTTTTGTTTGTGTTAGTTTTGTTTCTGAACCACGGCGTTGATGGCTTCTCTGAGCCTCTTCAGAAGAAGGCTCTTCCACCTCCTCCGGCTGTTCTTGTTGGCTCTGTTTTCTGTGACACTTGTTATCAGCAAAATCTCTCCAAGTTTGCCCATTTCATCCCAGGTACTCTGTTTTTTCTTCATCTTTGGATCCCATAGTTTAAAAGGCATTGATTTGGTCTCCACCCACATATGATCCTTGTTATTACTACTTGATTGCAGGTGCCACAGTTGCTGTAGAATGCAGAGACGAAAAAGCCTCCAAAACCAGTTTCCAGCATCAAGTCAAAACAAACAAACATGGCAAATTCAGAGTAGTTTTGCCATTCTCTGTGGCAAAACACATGAAAAAAATCGAAAGCTGTAATGTAAGACTGATCAAAAGCAGTGAACCCTTCTGCTCTGTAGCCTCCTCTGCAACTTCCTCTGCTCTCAAATTGAAGAACTCAAAGAACAAAAATGGCGTCCGAATTTTCTCAGCTGGTTTCTTCACTTTCAAGCCCGCTTTCTGCAATCAGAAGACCGACATTTTCAAATCCAAACAAGTCAACAACCCTCAGCTTCTGTTCCCGCCGATTGTTCCGCCCAACCCGCTGCAGCCGGAGGAAACTTCTTCAGAACTGAAACAGAGCCCATGATGATGGATGATTTGGTTAAAGATTGGATTTTTTTTTTTGTTGGGGTAATGAGTGATGGTGTAGAGTACGTTAAATAAGTTTGATTAAGGATTGAAGTTTGGTAATATTACTTATTTGGTTTCAAAATAAAAGTTTCATAATTTTAGGCCATTGGAGCAATCAAGAAAGTTCATATATCTCAT

mRNA sequence

GGATGAGATGAGACCCAACAGAAAAAAGAAAGAAACTTGTGTGGTTCTTCTACTTGTCCCGTGAACCAACGAAGTCCTTCTCCTCTCTGTTTTGCATTTACTTCTTCTAGTTCGCAGTTCACACTAACTTTTGGCCTGAAACTCATAAATAACAACTCCAGCCTTGCCGTTTTAGTGCTTTTAATATCTATCTTCCCATTTCAGAGATTCCAGAAGAGTTGAAAGAAGACAAAGATATGAGAATTTAGACAAGGAAAGATAGTAAGAGGGTTCATGATATTATTTGTCATTAAATTCTTGTTTTAAAGGGGTTTTTTCTTCGAGTATGGTCTGGTTTTTGTTTGTGTTAGTTTTGTTTCTGAACCACGGCGTTGATGGCTTCTCTGAGCCTCTTCAGAAGAAGGCTCTTCCACCTCCTCCGGCTGTTCTTGTTGGCTCTGTTTTCTGTGACACTTGTTATCAGCAAAATCTCTCCAAGTTTGCCCATTTCATCCCAGGTGCCACAGTTGCTGTAGAATGCAGAGACGAAAAAGCCTCCAAAACCAGTTTCCAGCATCAAGTCAAAACAAACAAACATGGCAAATTCAGAGTAGTTTTGCCATTCTCTGTGGCAAAACACATGAAAAAAATCGAAAGCTGTAATGTAAGACTGATCAAAAGCAGTGAACCCTTCTGCTCTGTAGCCTCCTCTGCAACTTCCTCTGCTCTCAAATTGAAGAACTCAAAGAACAAAAATGGCGTCCGAATTTTCTCAGCTGGTTTCTTCACTTTCAAGCCCGCTTTCTGCAATCAGAAGACCGACATTTTCAAATCCAAACAAGTCAACAACCCTCAGCTTCTGTTCCCGCCGATTGTTCCGCCCAACCCGCTGCAGCCGGAGGAAACTTCTTCAGAACTGAAACAGAGCCCATGATGATGGATGATTTGGTTAAAGATTGGATTTTTTTTTTTGTTGGGGTAATGAGTGATGGTGTAGAGTACGTTAAATAAGTTTGATTAAGGATTGAAGTTTGGTAATATTACTTATTTGGTTTCAAAATAAAAGTTTCATAATTTTAGGCCATTGGAGCAATCAAGAAAGTTCATATATCTCAT

Coding sequence (CDS)

ATGGTCTGGTTTTTGTTTGTGTTAGTTTTGTTTCTGAACCACGGCGTTGATGGCTTCTCTGAGCCTCTTCAGAAGAAGGCTCTTCCACCTCCTCCGGCTGTTCTTGTTGGCTCTGTTTTCTGTGACACTTGTTATCAGCAAAATCTCTCCAAGTTTGCCCATTTCATCCCAGGTGCCACAGTTGCTGTAGAATGCAGAGACGAAAAAGCCTCCAAAACCAGTTTCCAGCATCAAGTCAAAACAAACAAACATGGCAAATTCAGAGTAGTTTTGCCATTCTCTGTGGCAAAACACATGAAAAAAATCGAAAGCTGTAATGTAAGACTGATCAAAAGCAGTGAACCCTTCTGCTCTGTAGCCTCCTCTGCAACTTCCTCTGCTCTCAAATTGAAGAACTCAAAGAACAAAAATGGCGTCCGAATTTTCTCAGCTGGTTTCTTCACTTTCAAGCCCGCTTTCTGCAATCAGAAGACCGACATTTTCAAATCCAAACAAGTCAACAACCCTCAGCTTCTGTTCCCGCCGATTGTTCCGCCCAACCCGCTGCAGCCGGAGGAAACTTCTTCAGAACTGAAACAGAGCCCATGA

Protein sequence

MVWFLFVLVLFLNHGVDGFSEPLQKKALPPPPAVLVGSVFCDTCYQQNLSKFAHFIPGATVAVECRDEKASKTSFQHQVKTNKHGKFRVVLPFSVAKHMKKIESCNVRLIKSSEPFCSVASSATSSALKLKNSKNKNGVRIFSAGFFTFKPAFCNQKTDIFKSKQVNNPQLLFPPIVPPNPLQPEETSSELKQSP
Homology
[Close]
BLAST of Cp4.1LG02g13870 vs. Swiss-Prot
Match: ALL1_OLEEU (Major pollen allergen Ole e 1 OS=Olea europaea PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 3.0e-06
Identity = 41/154 (26.62%), Postives = 71/154 (46.10%), Query Frame = 1 

Query: 28  LPPPPAV---LVGSVFCDTCYQQNLSKFAHFIPGATVAVECRDEKASKTSFQHQVKTNKH 87
           +P PP     + G V+CDTC    +++ + FIPGA++ ++C+D++    +F     T   
Sbjct: 3   IPQPPVSQFHIQGQVYCDTCRAGFITELSEFIPGASLRLQCKDKENGDVTFTEVGYTRAE 62

Query: 88  GKFRVVLPFSVAKHMKKIESCNVRLIKSSEPFCSVASSA--TSSALKLK-NSKNKNGVRI 147
           G + +++     +   K E C + LI S    C+   +      +LK K N+ N     +
Sbjct: 63  GLYSMLV-----ERDHKNEFCEITLISSGRKDCNEIPTEGWAKPSLKFKLNTVNGTTRTV 122

Query: 148 FSAGFFTFKPAFCNQKTDIFKSKQVNNPQLLFPP 176
              GFF        +K  + K  QV N   ++PP
Sbjct: 123 NPLGFF--------KKEALPKCAQVYNKLGMYPP 143

[Close]
BLAST of Cp4.1LG02g13870 vs. Swiss-Prot
Match: LIGV1_LIGVU (Major pollen allergen Lig v 1 OS=Ligustrum vulgare PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 3.9e-06
Identity = 43/154 (27.92%), Postives = 68/154 (44.16%), Query Frame = 1 

Query: 28  LPPPPA---VLVGSVFCDTCYQQNLSKFAHFIPGATVAVECRDEKASKTSFQHQVKTNKH 87
           +P PP     + G V+CDTC  + +++ + FIPGA V ++C+D +  K +F     T   
Sbjct: 3   VPQPPVSQFYIQGQVYCDTCRARFITELSEFIPGAGVRLQCKDGENGKVTFTEVGYTKAE 62

Query: 88  GKFRVVLPFSVAKHMKKIESCNVRLIKSSEPFCSVASSATSSALKLK---NSKNKNGVRI 147
           G + +++     +   K E C + LI SS   C    +       LK   N+ N     I
Sbjct: 63  GLYNMLI-----ERDHKNEFCEITLISSSRKDCDEIPTEGWVKPSLKFVLNTVNGTTRTI 122

Query: 148 FSAGFFTFKPAFCNQKTDIFKSKQVNNPQLLFPP 176
              GF         +K  + K  QV N   ++PP
Sbjct: 123 NPLGFL--------KKEVLPKCPQVFNKLGMYPP 143

[Close]
BLAST of Cp4.1LG02g13870 vs. TrEMBL
Match: A0A0A0KW32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G126430 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 7.5e-57
Identity = 124/197 (62.94%), Postives = 145/197 (73.60%), Query Frame = 1 

Query: 3   WFLFVLVLFLNHGV-DGFSEPLQKKALPPPPAVLVGSVFCDTCYQQNLSKFAHFIPGATV 62
           W L +  +FLN    +GFS+PL        PAV+VG+VFCDTC+QQ+LS   HFI GA V
Sbjct: 5   WILLLFFMFLNLTFYNGFSKPLLLHNNKLQPAVVVGTVFCDTCFQQHLSNSHHFISGARV 64

Query: 63  AVECRDEKASKTSFQHQVKTNKHGKFRVVLPFSVAKHMKKIESCNVRLIKSSEPFCSVAS 122
            VECRDEK  + SF+ QVKTNK+GKF+VVLPFS+AKH+KKIESC+V+LIKSSEPFCSVAS
Sbjct: 65  EVECRDEKTPEASFKQQVKTNKNGKFKVVLPFSIAKHVKKIESCSVKLIKSSEPFCSVAS 124

Query: 123 SATSSALKLKNSKNKNGVRIFSAGFFTFK----PAFCNQKTDIFKSKQVNNPQLLFPPIV 182
           SA+SS+L+LKNSKNKNGVRIFSAGFFTFK    P  CNQK         +NPQL FPP+V
Sbjct: 125 SASSSSLQLKNSKNKNGVRIFSAGFFTFKPLQQPTLCNQK---------SNPQLPFPPLV 184

Query: 183 ----------PPNPLQP 185
                     PPNPLQP
Sbjct: 185 PPVIQPPSFFPPNPLQP 192

[Close]
BLAST of Cp4.1LG02g13870 vs. TrEMBL
Match: A0A0D2PUQ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G206700 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44
Identity = 100/186 (53.76%), Postives = 132/186 (70.97%), Query Frame = 1 

Query: 3   WFLFVLVLFLNHGVDGFSEPLQKKALPPPPAVLVGSVFCDTCYQQNLSKFAHFIPGATVA 62
           +F ++L   + +G    S   Q++      AV+VG+V+CDTC+Q + S+  HFI GATVA
Sbjct: 5   FFTWLLCFIIFNGYSEGSHGYQQQQ----SAVVVGTVYCDTCFQSDFSRPTHFISGATVA 64

Query: 63  VECRDEKASKTSFQHQVKTNKHGKFRVVLPFSVAKHMKKIESCNVRLIKSSEPFCSVASS 122
           VEC+D K+S+ SF+ QVKTN+HG+F+V LPFSV+KH+KKIE C V+LIKSSEP+C+VASS
Sbjct: 65  VECKDGKSSRASFRQQVKTNRHGEFKVHLPFSVSKHVKKIEGCEVKLIKSSEPYCAVASS 124

Query: 123 ATSSALKLKNSKNKNGVRIFSAGFFTFK----PAFCNQKTDIFKSKQVNNPQLLFPPIVP 182
           ATSS+L LK+   K G  +FSAGFFTFK    P  C+QK  +  +      QLL PPI+P
Sbjct: 125 ATSSSLHLKS--RKQGTHVFSAGFFTFKPFKQPTLCSQKPSVHPN------QLLPPPILP 178

Query: 183 PNPLQP 185
           PNPL P
Sbjct: 185 PNPLLP 178

[Close]
BLAST of Cp4.1LG02g13870 vs. TrEMBL
Match: A0A0B0MR63_GOSAR (Major pollen allergen Lig v 1 OS=Gossypium arboreum GN=F383_24177 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.9e-44
Identity = 95/156 (60.90%), Postives = 121/156 (77.56%), Query Frame = 1 

Query: 33  AVLVGSVFCDTCYQQNLSKFAHFIPGATVAVECRDEKASKTSFQHQVKTNKHGKFRVVLP 92
           AV+VG+V+CDTC+Q ++S+  HFI GATVAVEC+D K+S+ SF+ QVKTN+HG+F+V LP
Sbjct: 31  AVVVGTVYCDTCFQSDISRPTHFISGATVAVECKDGKSSRASFRQQVKTNRHGEFKVHLP 90

Query: 93  FSVAKHMKKIESCNVRLIKSSEPFCSVASSATSSALKLKNSKNKNGVRIFSAGFFTFK-- 152
           FSV+KH+KKIE C V+LIKSSEP+C+VASSATSS+L LK+   K G  +FSAGFFTFK  
Sbjct: 91  FSVSKHVKKIEGCEVKLIKSSEPYCAVASSATSSSLHLKSM--KQGTHVFSAGFFTFKPF 150

Query: 153 --PAFCNQKTDIFKSKQVNNPQLLFPPIVPPNPLQP 185
             P  C+QK  +  +      QLL PPI+PPNPL P
Sbjct: 151 KQPTLCSQKPSVHPN------QLLPPPILPPNPLLP 178

[Close]
BLAST of Cp4.1LG02g13870 vs. TrEMBL
Match: A0A067FY85_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019020mg PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 8.9e-42
Identity = 97/200 (48.50%), Postives = 132/200 (66.00%), Query Frame = 1 

Query: 1   MVWFLFVLVL-FLNHGVDGFSEPLQKKALPPPPAVLVGSVFCDTCYQQNLSKFAHFIPGA 60
           M WF  +  L F+   ++  S   +K+    P AV+VG+V+CDTC+Q N SK +HFI GA
Sbjct: 3   MSWFYLIFFLSFIIGNLEAESNHHEKRH---PSAVVVGTVYCDTCFQDNFSKASHFISGA 62

Query: 61  TVAVECRDEKASKTSFQHQVKTNKHGKFRVVLPFSVAKHMKKIESCNVRLIKSSEPFCSV 120
           +VAVEC+DE  SK SF+ +VKT++HG+F+V LPFSV+KH+KKI  C+V+LI SSEP+C V
Sbjct: 63  SVAVECKDE-TSKPSFRQEVKTDEHGEFKVDLPFSVSKHVKKINRCSVKLINSSEPYCGV 122

Query: 121 ASSATSSALKLKNSKNKNGVRIFSAGFFTFKPA----FCNQKTDIFKSKQVNNPQLLFPP 180
           AS+ATSS+L LK+   K G+ IFSAGFFTFKP      CNQK  +  S  +N+ +   PP
Sbjct: 123 ASTATSSSLHLKS--RKQGIHIFSAGFFTFKPLKQPNLCNQKPSLENSTSLNSEEASLPP 182

Query: 181 IVPPNPLQPEETSSELKQSP 196
              P+   P      + + P
Sbjct: 183 FDSPSTFPPPIQDPTMPEFP 196

[Close]
BLAST of Cp4.1LG02g13870 vs. TrEMBL
Match: V4UWT1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012100mg PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-41
Identity = 96/200 (48.00%), Postives = 132/200 (66.00%), Query Frame = 1 

Query: 1   MVWFLFVLVL-FLNHGVDGFSEPLQKKALPPPPAVLVGSVFCDTCYQQNLSKFAHFIPGA 60
           M WF  +  L F+   ++  S   +K+    P A++VG+V+CDTC+Q N SK +HFI GA
Sbjct: 3   MSWFYLIFFLSFIIGNLEAESNHHEKRH---PSAIVVGTVYCDTCFQDNFSKASHFISGA 62

Query: 61  TVAVECRDEKASKTSFQHQVKTNKHGKFRVVLPFSVAKHMKKIESCNVRLIKSSEPFCSV 120
           +VAVEC+DE  SK SF+ +VKT++HG+F+V LPFSV+KH+KKI  C+V+LI SSEP+C V
Sbjct: 63  SVAVECKDE-TSKPSFRQEVKTDEHGEFKVDLPFSVSKHVKKINRCSVKLINSSEPYCGV 122

Query: 121 ASSATSSALKLKNSKNKNGVRIFSAGFFTFKPA----FCNQKTDIFKSKQVNNPQLLFPP 180
           AS+ATSS+L LK+   K G+ IFSAGFFTFKP      CNQK  +  S  +N+ +   PP
Sbjct: 123 ASTATSSSLHLKS--RKQGIHIFSAGFFTFKPLKQPNLCNQKPSLENSTSLNSEEASLPP 182

Query: 181 IVPPNPLQPEETSSELKQSP 196
              P+   P      + + P
Sbjct: 183 FDSPSTFPPPIQDPTMPEFP 196

[Close]
BLAST of Cp4.1LG02g13870 vs. TAIR10
Match: AT5G15780.1 (AT5G15780.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 158.3 bits (399), Expect = 4.8e-39
Identity = 91/190 (47.89%), Postives = 126/190 (66.32%), Query Frame = 1 

Query: 2   VWFLFVLVLFLNHGVDGFSEPLQKKALPPP--PAVLVGSVFCDTCYQQNLSKFA-HFIPG 61
           +WF F L++FL   ++G     Q+  +      AV+VG+V+CDTC+    SK   H I G
Sbjct: 7   LWFWFSLMIFLGISINGGLSQGQQHVMKKTRSSAVVVGTVYCDTCFNGAFSKSPNHLISG 66

Query: 62  ATVAVECRDEKASKTSFQHQVKTNKHGKFRVVLPFSVAKHMKKIESCNVRLIKSSEPFCS 121
           A VAVEC DE  SK SF+ +VKT+K G+F+V LPFSV+KH+KKI+ C+V+L+ SS+P+CS
Sbjct: 67  ALVAVECIDEN-SKPSFRQEVKTDKRGEFKVKLPFSVSKHVKKIKRCSVKLLSSSQPYCS 126

Query: 122 VASSATSSALK-LKNSKNKNGVRIFSAGFFTFK----PAFCNQKTDIFKSKQVNNPQLLF 181
           +ASSATSS+LK LK++ +    R+FSAGFFTF+    P  C+QK    +  +   P   F
Sbjct: 127 IASSATSSSLKRLKSNHHGENTRVFSAGFFTFRPENQPEICSQKPINLRGSKPLLPDPSF 186

[Close]
BLAST of Cp4.1LG02g13870 vs. TAIR10
Match: AT1G78040.1 (AT1G78040.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 55.1 bits (131), Expect = 5.7e-08
Identity = 29/89 (32.58%), Postives = 49/89 (55.06%), Query Frame = 1 

Query: 34  VLVGSVFCDTC-YQQNLSKFAHFIPGATVAVECRDEKASKTSFQHQVKTNKHGKFRVVLP 93
           V+ GS +CD C +     + ++FIPGATV + C+D K  +  +  +  ++K GK++ ++ 
Sbjct: 31  VVQGSTYCDICKFGFETPESSYFIPGATVKLSCKDRKTMEEVYTDKAVSDKEGKYKFIVH 90

Query: 94  FSVAKHMKKIESCNVRLIKSSEPFCSVAS 122
                 M     C+V L+KSS+  CS  S
Sbjct: 91  DDHRDQM-----CDVLLVKSSDKTCSKIS 114

[Close]
BLAST of Cp4.1LG02g13870 vs. TAIR10
Match: AT3G26960.1 (AT3G26960.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 47/173 (27.17%), Postives = 75/173 (43.35%), Query Frame = 1 

Query: 1   MVWFLFVLVLFL--NHGVDGFSEPLQKKALPPPPAVLVGSVFCDTCYQQNLSKFAHFIPG 60
           +  FLF+L+ FL  N      S P  K   P     ++G V+CD C + + SK ++F+ G
Sbjct: 6   LTMFLFILLQFLLVNSLSSKHSSPKPK---PDAEITIMGFVYCDVCSKNSFSKHSYFMSG 65

Query: 61  ATVAVECRDEKASKT-----SFQHQVKTNKHGKFRVVL-PFSVAKHMKKIESCNVRLI-- 120
             V + CR + AS T     +F     TN+ G ++V +     A       SC   LI  
Sbjct: 66  VEVRIVCRFKAASSTTTETITFSANRTTNEFGLYKVAISSLDCADVDSLASSCQASLIGR 125

Query: 121 -KSSEPFCSVASSATSSALKLKNSKNKNGVRIFSAGFFTFKP-----AFCNQK 158
              S+  C++    T++   L  S+  N   ++      F+P     A C +K
Sbjct: 126 KNFSDSSCNIPGYRTTTDQVLFKSQQSNSC-VYGFNALNFRPFKRDLALCGKK 174

[Close]
BLAST of Cp4.1LG02g13870 vs. TAIR10
Match: AT4G08685.1 (AT4G08685.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.2e-07
Identity = 25/90 (27.78%), Postives = 49/90 (54.44%), Query Frame = 1 

Query: 32  PAVLVGSVFCDTCYQQNLSKFAHFIPGATVAVECRDEKASKTSFQHQVKTNKHGKFRVVL 91
           P V+ G V+CDTC     +  + +I GA V +EC+D +  + ++ H+ +T+  G +++++
Sbjct: 26  PFVVRGRVYCDTCLAGFETPASTYISGAVVRLECKDRRTMELTYSHEARTDSTGSYKILV 85

Query: 92  PFSVAKHMKKIESCNVRLIKSSEPFCSVAS 122
                      + C+  L++SS+  CS  S
Sbjct: 86  -----NEDHDEQFCDAMLVRSSQLRCSNVS 110

[Close]
BLAST of Cp4.1LG02g13870 vs. TAIR10
Match: AT4G18596.1 (AT4G18596.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.8e-06
Identity = 26/85 (30.59%), Postives = 46/85 (54.12%), Query Frame = 1 

Query: 37  GSVFCDTCYQQNLSKFAHFIPGATVAVECRDEKASKTSFQHQVKTNKHGKFRVVLPFSVA 96
           GSV+CDTC  Q +++ + F+ GA V +ECR       +   +  T+K G +R+ +     
Sbjct: 37  GSVYCDTCRVQFVTRLSKFLEGAKVKLECRSRTNGTVTLTKEAVTDKTGSYRMEV---TG 96

Query: 97  KHMKKIESCNVRLIKSSEPFCSVAS 122
            H +++  C + L++S +  CS  S
Sbjct: 97  DHEEEV--CELVLVESPDSGCSDVS 116

[Close]
BLAST of Cp4.1LG02g13870 vs. NCBI nr
Match: gi|449438733|ref|XP_004137142.1| (PREDICTED: amyloid beta A4 precursor protein-binding family B member 1-interacting protein [Cucumis sativus])

HSP 1 Score: 228.4 bits (581), Expect = 1.1e-56
Identity = 124/197 (62.94%), Postives = 145/197 (73.60%), Query Frame = 1 

Query: 3   WFLFVLVLFLNHGV-DGFSEPLQKKALPPPPAVLVGSVFCDTCYQQNLSKFAHFIPGATV 62
           W L +  +FLN    +GFS+PL        PAV+VG+VFCDTC+QQ+LS   HFI GA V
Sbjct: 5   WILLLFFMFLNLTFYNGFSKPLLLHNNKLQPAVVVGTVFCDTCFQQHLSNSHHFISGARV 64

Query: 63  AVECRDEKASKTSFQHQVKTNKHGKFRVVLPFSVAKHMKKIESCNVRLIKSSEPFCSVAS 122
            VECRDEK  + SF+ QVKTNK+GKF+VVLPFS+AKH+KKIESC+V+LIKSSEPFCSVAS
Sbjct: 65  EVECRDEKTPEASFKQQVKTNKNGKFKVVLPFSIAKHVKKIESCSVKLIKSSEPFCSVAS 124

Query: 123 SATSSALKLKNSKNKNGVRIFSAGFFTFK----PAFCNQKTDIFKSKQVNNPQLLFPPIV 182
           SA+SS+L+LKNSKNKNGVRIFSAGFFTFK    P  CNQK         +NPQL FPP+V
Sbjct: 125 SASSSSLQLKNSKNKNGVRIFSAGFFTFKPLQQPTLCNQK---------SNPQLPFPPLV 184

Query: 183 ----------PPNPLQP 185
                     PPNPLQP
Sbjct: 185 PPVIQPPSFFPPNPLQP 192

[Close]
BLAST of Cp4.1LG02g13870 vs. NCBI nr
Match: gi|659111055|ref|XP_008455556.1| (PREDICTED: formin-like protein 7 [Cucumis melo])

HSP 1 Score: 222.6 bits (566), Expect = 5.9e-55
Identity = 123/199 (61.81%), Postives = 140/199 (70.35%), Query Frame = 1 

Query: 1   MVWFLFVLVLFLNHGVD-GFSEPLQKKALPPPPAVLVGSVFCDTCYQQNLSKFAHFIPGA 60
           M W L +  LFLN   + GFS+PL        PAV+VG+VFCDTC+QQ+LS   HFI GA
Sbjct: 3   MGWVLLLFFLFLNFNFNNGFSKPLVHNNNKLQPAVVVGTVFCDTCFQQHLSGSHHFISGA 62

Query: 61  TVAVECRDEKASKTSFQHQVKTNKHGKFRVVLPFSVAKHMKKIESCNVRLIKSSEPFCSV 120
            + VECRDE     SF+ QVKTNK+GKFRVVLPFS+AKH+KKIE C+V+LIKSSEPFCSV
Sbjct: 63  RIEVECRDENNPIASFKQQVKTNKNGKFRVVLPFSIAKHIKKIERCSVKLIKSSEPFCSV 122

Query: 121 ASSATSSALKLKNSKNKNGVRIFSAGFFTFK----PAFCNQKTDIFKSKQVNNPQLLFPP 180
            SSA+SS LK KNSKNKNGVRIFSAGFFTFK    P  CNQK         +NPQL FPP
Sbjct: 123 VSSASSSFLKFKNSKNKNGVRIFSAGFFTFKPLQQPTLCNQK---------SNPQLPFPP 182

Query: 181 IV----------PPNPLQP 185
           +V          PPNPLQP
Sbjct: 183 LVPPVIQPPSFLPPNPLQP 192

[Close]
BLAST of Cp4.1LG02g13870 vs. NCBI nr
Match: gi|823126330|ref|XP_012488255.1| (PREDICTED: sulfated surface glycoprotein 185-like [Gossypium raimondii])

HSP 1 Score: 188.0 bits (476), Expect = 1.6e-44
Identity = 100/186 (53.76%), Postives = 132/186 (70.97%), Query Frame = 1 

Query: 3   WFLFVLVLFLNHGVDGFSEPLQKKALPPPPAVLVGSVFCDTCYQQNLSKFAHFIPGATVA 62
           +F ++L   + +G    S   Q++      AV+VG+V+CDTC+Q + S+  HFI GATVA
Sbjct: 5   FFTWLLCFIIFNGYSEGSHGYQQQQ----SAVVVGTVYCDTCFQSDFSRPTHFISGATVA 64

Query: 63  VECRDEKASKTSFQHQVKTNKHGKFRVVLPFSVAKHMKKIESCNVRLIKSSEPFCSVASS 122
           VEC+D K+S+ SF+ QVKTN+HG+F+V LPFSV+KH+KKIE C V+LIKSSEP+C+VASS
Sbjct: 65  VECKDGKSSRASFRQQVKTNRHGEFKVHLPFSVSKHVKKIEGCEVKLIKSSEPYCAVASS 124

Query: 123 ATSSALKLKNSKNKNGVRIFSAGFFTFK----PAFCNQKTDIFKSKQVNNPQLLFPPIVP 182
           ATSS+L LK+   K G  +FSAGFFTFK    P  C+QK  +  +      QLL PPI+P
Sbjct: 125 ATSSSLHLKS--RKQGTHVFSAGFFTFKPFKQPTLCSQKPSVHPN------QLLPPPILP 178

Query: 183 PNPLQP 185
           PNPL P
Sbjct: 185 PNPLLP 178

[Close]
BLAST of Cp4.1LG02g13870 vs. NCBI nr
Match: gi|728818493|gb|KHG02822.1| (Major pollen allergen Lig v 1 [Gossypium arboreum])

HSP 1 Score: 187.2 bits (474), Expect = 2.7e-44
Identity = 95/156 (60.90%), Postives = 121/156 (77.56%), Query Frame = 1 

Query: 33  AVLVGSVFCDTCYQQNLSKFAHFIPGATVAVECRDEKASKTSFQHQVKTNKHGKFRVVLP 92
           AV+VG+V+CDTC+Q ++S+  HFI GATVAVEC+D K+S+ SF+ QVKTN+HG+F+V LP
Sbjct: 31  AVVVGTVYCDTCFQSDISRPTHFISGATVAVECKDGKSSRASFRQQVKTNRHGEFKVHLP 90

Query: 93  FSVAKHMKKIESCNVRLIKSSEPFCSVASSATSSALKLKNSKNKNGVRIFSAGFFTFK-- 152
           FSV+KH+KKIE C V+LIKSSEP+C+VASSATSS+L LK+   K G  +FSAGFFTFK  
Sbjct: 91  FSVSKHVKKIEGCEVKLIKSSEPYCAVASSATSSSLHLKSM--KQGTHVFSAGFFTFKPF 150

Query: 153 --PAFCNQKTDIFKSKQVNNPQLLFPPIVPPNPLQP 185
             P  C+QK  +  +      QLL PPI+PPNPL P
Sbjct: 151 KQPTLCSQKPSVHPN------QLLPPPILPPNPLLP 178

[Close]
BLAST of Cp4.1LG02g13870 vs. NCBI nr
Match: gi|694397004|ref|XP_009373766.1| (PREDICTED: protein app1-like [Pyrus x bretschneideri])

HSP 1 Score: 182.6 bits (462), Expect = 6.7e-43
Identity = 103/202 (50.99%), Postives = 135/202 (66.83%), Query Frame = 1 

Query: 1   MVWFLFVLVLFLNHGVDGFSEPLQKKALPPPPAVLVGSVFCDTCYQQNLSKFAHFIPGAT 60
           M WFL V+ L         SE  Q+K    P AV+VG+V+CDTC+Q++ S  +HFI GA+
Sbjct: 6   MSWFLTVIFLVATLTFHTPSEASQEKN--HPSAVVVGTVYCDTCFQEDFSHPSHFISGAS 65

Query: 61  VAVECRDEKASKTSFQHQVKTNKHGKFRVVLPFSVAKHMKKIESCNVRLIKSSEPFCSVA 120
           V VEC+D  +++ SF+ QVKTN HG+F+V+LPFSV+KH+KKIE C+V+LI SSEP+C+VA
Sbjct: 66  VGVECKDGSSTEQSFKAQVKTNSHGQFKVLLPFSVSKHVKKIEGCSVKLISSSEPYCAVA 125

Query: 121 SSATSSALKLKNSKNKNGVRIFSAGFFTFK----PAFCNQKTDIFKSKQVNNPQLLFP-- 180
           SSATSS+L LK    K G  IFSAGFFTFK    P  CNQK  I  SK++N+ +  FP  
Sbjct: 126 SSATSSSLHLK--ARKQGTHIFSAGFFTFKPLKQPTLCNQKPSIQNSKKLNSQKFSFPHT 185

Query: 181 -PIVPPNPLQPEETSSELKQSP 196
             +  P+P Q   T  +L   P
Sbjct: 186 DELEFPSPSQVNPTIPDLPPVP 203

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g13870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ALL1_OLEEU3.0e-0626.62Major pollen allergen Ole e 1 OS=Olea europaea PE=1 SV=2[more]
LIGV1_LIGVU3.9e-0627.92Major pollen allergen Lig v 1 OS=Ligustrum vulgare PE=1 SV=2[more]
BLAST of Cp4.1LG02g13870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW32_CUCSA7.5e-5762.94Uncharacterized protein OS=Cucumis sativus GN=Csa_4G126430 PE=4 SV=1[more]
A0A0D2PUQ4_GOSRA1.1e-4453.76Uncharacterized protein OS=Gossypium raimondii GN=B456_001G206700 PE=4 SV=1[more]
A0A0B0MR63_GOSAR1.9e-4460.90Major pollen allergen Lig v 1 OS=Gossypium arboreum GN=F383_24177 PE=4 SV=1[more]
A0A067FY85_CITSI8.9e-4248.50Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019020mg PE=4 SV=1[more]
V4UWT1_9ROSI1.2e-4148.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012100mg PE=4 SV=1[more]
BLAST of Cp4.1LG02g13870 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G15780.14.8e-3947.89 Pollen Ole e 1 allergen and extensin family protein[more]
AT1G78040.15.7e-0832.58 Pollen Ole e 1 allergen and extensin family protein[more]
AT3G26960.11.3e-0727.17 Pollen Ole e 1 allergen and extensin family protein[more]
AT4G08685.12.2e-0727.78 Pollen Ole e 1 allergen and extensin family protein[more]
AT4G18596.11.8e-0630.59 Pollen Ole e 1 allergen and extensin family protein[more]
BLAST of Cp4.1LG02g13870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438733|ref|XP_004137142.1|1.1e-5662.94PREDICTED: amyloid beta A4 precursor protein-binding family B member 1-interacti... [more]
gi|659111055|ref|XP_008455556.1|5.9e-5561.81PREDICTED: formin-like protein 7 [Cucumis melo][more]
gi|823126330|ref|XP_012488255.1|1.6e-4453.76PREDICTED: sulfated surface glycoprotein 185-like [Gossypium raimondii][more]
gi|728818493|gb|KHG02822.1|2.7e-4460.90Major pollen allergen Lig v 1 [Gossypium arboreum][more]
gi|694397004|ref|XP_009373766.1|6.7e-4350.99PREDICTED: protein app1-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0051225 spindle assembly
cellular_component GO:0005575 cellular_component
cellular_component GO:0070652 HAUS complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g13870.1Cp4.1LG02g13870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33210FAMILY NOT NAMEDcoord: 1..165
score: 1.6
NoneNo IPR availablePANTHERPTHR33210:SF1SUBFAMILY NOT NAMEDcoord: 1..165
score: 1.6
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_Icoord: 36..124
score: 4.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g13870Cucsa.174570Cucumber (Gy14) v1cgycpeB0480
Cp4.1LG02g13870CmaCh14G011460Cucurbita maxima (Rimu)cmacpeB280
Cp4.1LG02g13870CmaCh01G004260Cucurbita maxima (Rimu)cmacpeB491
Cp4.1LG02g13870CmoCh01G004570Cucurbita moschata (Rifu)cmocpeB449
Cp4.1LG02g13870CmoCh14G011770Cucurbita moschata (Rifu)cmocpeB242
Cp4.1LG02g13870Cla010810Watermelon (97103) v1cpewmB555
Cp4.1LG02g13870Csa4G126430Cucumber (Chinese Long) v2cpecuB567
Cp4.1LG02g13870MELO3C018892Melon (DHL92) v3.5.1cpemeB541
Cp4.1LG02g13870ClCG07G016060Watermelon (Charleston Gray)cpewcgB525
Cp4.1LG02g13870CSPI04G09910Wild cucumber (PI 183967)cpecpiB569
Cp4.1LG02g13870Lsi07G009620Bottle gourd (USVL1VR-Ls)cpelsiB475
Cp4.1LG02g13870MELO3C018892.2Melon (DHL92) v3.6.1cpemedB641
Cp4.1LG02g13870CsaV3_4G010050Cucumber (Chinese Long) v3cpecucB0704
Cp4.1LG02g13870Bhi01G001721Wax gourdcpewgoB0674
Cp4.1LG02g13870CsGy4G009520Cucumber (Gy14) v2cgybcpeB542
Cp4.1LG02g13870Carg26744Silver-seed gourdcarcpeB1149
Cp4.1LG02g13870Carg20379Silver-seed gourdcarcpeB0982
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG02g13870Cp4.1LG03g15420Cucurbita pepo (Zucchini)cpecpeB450
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g13870Watermelon (Charleston Gray)cpewcgB508
Cp4.1LG02g13870Watermelon (97103) v1cpewmB579
Cp4.1LG02g13870Melon (DHL92) v3.5.1cpemeB495
Cp4.1LG02g13870Cucumber (Gy14) v2cgybcpeB096
Cp4.1LG02g13870Cucumber (Gy14) v2cgybcpeB103
Cp4.1LG02g13870Melon (DHL92) v3.6.1cpemedB602
Cp4.1LG02g13870Melon (DHL92) v3.6.1cpemedB587
Cp4.1LG02g13870Cucumber (Chinese Long) v3cpecucB0669
Cp4.1LG02g13870Wax gourdcpewgoB0738
Cp4.1LG02g13870Wax gourdcpewgoB0679
Cp4.1LG02g13870Wax gourdcpewgoB0703
Cp4.1LG02g13870Cucurbita pepo (Zucchini)cpecpeB357
Cp4.1LG02g13870Cucurbita pepo (Zucchini)cpecpeB438