Cp4.1LG02g12890 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g12890
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLaccase
LocationCp4.1LG02 : 11504846 .. 11505475 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGAATGGTGGAATTCCGACATGGAAGCTGTTATTGCCCAAGCTTTGCAAACGGGTGGAGGTCCTAATGTATCAGACGCTTATACAATGAACGGTCTCCCTGGACCTTTGTATAATTGCTCCGCCAAAGGTATTACAATTGAGGATTGTTGGGAGGGAGCCCTGTACCACATTGATTAATTTAGGGAATAATCATGCGTTTATAAGTAAGAAATACATTTTCTGGGAAATCACGAAAGCTTATGCTCAAAGTAGACAATATCATATCATTGTGGAGAGTCGTGATTCCTAATCAAAAGGGTCTTTTAAACGCCTGAAAAGGTACGATTTTGATACGATTTCTTGGCTTGCAGATACGTTAAAGCTGAAAGTGAAGCCCGGAAGAACATATCTACTTCGATTAGTGAATGCAGCATTAAACGATGAATTGTTCTTCAGCATAGCAAATCATACGCTCAAGATTGTTGATGTTGATGCCATTTATGTCAAACCCTTTGAAACAAACACTCTTTTGATAGCGCCAGGACAAACCACAAATGTTCTTCTTCAAACAAAACCCGATTATCCAAACGCCACTTTTTTCATGCTTGCACGACCATACGTAACGGGCCAAGGAACATTCGACAATTCC

mRNA sequence

GGGAATGGTGGAATTCCGACATGGAAGCTGTTATTGCCCAAGCTTTGCAAACGGGTGGAGGTCCTAATCTGAAAGTGAAGCCCGGAAGAACATATCTACTTCGATTAGTGAATGCAGCATTAAACGATGAATTGTTCTTCAGCATAGCAAATCATACGCTCAAGATTGTTGATGTTGATGCCATTTATGTCAAACCCTTTGAAACAAACACTCTTTTGATAGCGCCAGGACAAACCACAAATGTTCTTCTTCAAACAAAACCCGATTATCCAAACGCCACTTTTTTCATGCTTGCACGACCATACGTAACGGGCCAAGGAACATTCGACAATTCC

Coding sequence (CDS)

ATGGAAGCTGTTATTGCCCAAGCTTTGCAAACGGGTGGAGGTCCTAATCTGAAAGTGAAGCCCGGAAGAACATATCTACTTCGATTAGTGAATGCAGCATTAAACGATGAATTGTTCTTCAGCATAGCAAATCATACGCTCAAGATTGTTGATGTTGATGCCATTTATGTCAAACCCTTTGAAACAAACACTCTTTTGATAGCGCCAGGACAAACCACAAATGTTCTTCTTCAAACAAAACCCGATTATCCAAACGCCACTTTTTTCATGCTTGCACGACCATACGTAACGGGCCAAGGAACATTCGACAATTCC

Protein sequence

MEAVIAQALQTGGGPNLKVKPGRTYLLRLVNAALNDELFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVTGQGTFDNS
Homology
[Close]
BLAST of Cp4.1LG02g12890 vs. Swiss-Prot
Match: LAC17_ARATH (Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 3.4e-41
Identity = 85/128 (66.41%), Postives = 96/128 (75.00%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EA+I QA QTGGGPN                        L+VKPG+TYLLRL+NAALNDE
Sbjct: 171 EAIIRQATQTGGGPNVSDAYTINGLPGPLYNCSAKDTFRLRVKPGKTYLLRLINAALNDE 230

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHT+ +V+ DAIYVKPFET T+LIAPGQTTNVLL+TK  YP+A+FFM ARPYVT
Sbjct: 231 LFFSIANHTVTVVEADAIYVKPFETETILIAPGQTTNVLLKTKSSYPSASFFMTARPYVT 290

[Close]
BLAST of Cp4.1LG02g12890 vs. Swiss-Prot
Match: LAC12_ORYSJ (Laccase-12 OS=Oryza sativa subsp. japonica GN=LAC12 PE=3 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-39
Identity = 82/128 (64.06%), Postives = 95/128 (74.22%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EAVI+QALQTGGGPN                        LKVKPG+TY+LRL+NAALNDE
Sbjct: 176 EAVISQALQTGGGPNISDAYTLNGLPGPLYNCSAQDTFKLKVKPGKTYMLRLINAALNDE 235

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHTL +VDVDA+YVKPF  +TL+IAPGQT+NVLL  KP YP A+++MLARPY T
Sbjct: 236 LFFSIANHTLTVVDVDALYVKPFTVDTLIIAPGQTSNVLLTAKPTYPGASYYMLARPYTT 295

[Close]
BLAST of Cp4.1LG02g12890 vs. Swiss-Prot
Match: LAC13_ORYSJ (Laccase-13 OS=Oryza sativa subsp. japonica GN=LAC13 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-39
Identity = 82/128 (64.06%), Postives = 95/128 (74.22%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EAVI+QALQTGGGPN                        LKVKPG+TY+LRL+NAALNDE
Sbjct: 176 EAVISQALQTGGGPNISDAYTLNGLPGPLYNCSAQDTFKLKVKPGKTYMLRLINAALNDE 235

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHTL +VDVDA+YVKPF  +TL+IAPGQT+NVLL  KP YP A+++MLARPY T
Sbjct: 236 LFFSIANHTLTVVDVDALYVKPFTVDTLIIAPGQTSNVLLTAKPTYPGASYYMLARPYTT 295

[Close]
BLAST of Cp4.1LG02g12890 vs. Swiss-Prot
Match: LAC2_ARATH (Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 7.1e-39
Identity = 80/128 (62.50%), Postives = 93/128 (72.66%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           +AV+ QALQTG GPN                        L VKPG+TYLLRL+NAALNDE
Sbjct: 176 QAVVQQALQTGAGPNASDAHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLINAALNDE 235

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFF+IANHTL +V+ DA YVKPF+TN +L+ PGQTTNVLL+TKP YPNATF+MLARPY T
Sbjct: 236 LFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPIYPNATFYMLARPYFT 295

[Close]
BLAST of Cp4.1LG02g12890 vs. Swiss-Prot
Match: LAC10_ORYSJ (Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 9.0e-34
Identity = 76/131 (58.02%), Postives = 92/131 (70.23%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EA++AQALQTGGGPN                        LKV+PG+ YLLRL+NAALNDE
Sbjct: 178 EAIVAQALQTGGGPNVSDAYTINGLPGPLYNCSSKDTFRLKVQPGKMYLLRLINAALNDE 237

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKP--DYPNATFFMLARPY 106
           LFFS+ANHTL +VDVDA YVKPF+T+ +LI PGQTTNVLL+ KP  +   AT  M+ARPY
Sbjct: 238 LFFSVANHTLTVVDVDASYVKPFDTDVVLITPGQTTNVLLRAKPTAEAAGATHLMMARPY 297

[Close]
BLAST of Cp4.1LG02g12890 vs. TrEMBL
Match: A0A0D2UJM9_GOSRA (Laccase OS=Gossypium raimondii GN=B456_009G103200 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.9e-43
Identity = 94/128 (73.44%), Postives = 100/128 (78.12%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EAVI+QALQTGGGPN                        LKVKPG+TYLLRL+NAALNDE
Sbjct: 178 EAVISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDE 237

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHTL +VDVDAIYVKPFET TLLIAPGQTTNV+L+TKP YPNATFFM ARPYVT
Sbjct: 238 LFFSIANHTLTVVDVDAIYVKPFETETLLIAPGQTTNVILKTKPRYPNATFFMTARPYVT 297

[Close]
BLAST of Cp4.1LG02g12890 vs. TrEMBL
Match: A0A061FAR0_THECC (Laccase OS=Theobroma cacao GN=TCM_032988 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.3e-43
Identity = 94/128 (73.44%), Postives = 99/128 (77.34%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EAVI+QALQTGGGPN                        LKVKPGRTYLLRL+NAALNDE
Sbjct: 178 EAVISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGRTYLLRLINAALNDE 237

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHTL +VDVDAIYVKPFET TLLI PGQTTNVLL+TKP YP+ATFFM ARPYVT
Sbjct: 238 LFFSIANHTLTVVDVDAIYVKPFETETLLITPGQTTNVLLKTKPSYPSATFFMTARPYVT 297

[Close]
BLAST of Cp4.1LG02g12890 vs. TrEMBL
Match: A0A0D2V8A5_GOSRA (Laccase OS=Gossypium raimondii GN=B456_013G025500 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 9.6e-43
Identity = 92/128 (71.88%), Postives = 99/128 (77.34%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EAVI+QALQTGGGPN                        LKVKPG+TYLLRLVNAALNDE
Sbjct: 178 EAVISQALQTGGGPNVSDAYTINGLPGPLYTCSAKDTFKLKVKPGKTYLLRLVNAALNDE 237

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHTL +VDVDA+YVKPF+T TLLI PGQTTNV+L+TKP YPNATFFM ARPYVT
Sbjct: 238 LFFSIANHTLTVVDVDAVYVKPFKTETLLITPGQTTNVILKTKPSYPNATFFMTARPYVT 297

[Close]
BLAST of Cp4.1LG02g12890 vs. TrEMBL
Match: A0A0D2W207_GOSRA (Laccase OS=Gossypium raimondii GN=B456_013G021400 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-42
Identity = 92/128 (71.88%), Postives = 98/128 (76.56%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EAVI+QALQTGGGPN                        LKVKPG+TYLLRL+NAALNDE
Sbjct: 178 EAVISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDE 237

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHTL +VDVDAIYVKPFET TLLI PGQTTNV+L+TKP YPNATFFM ARPYV 
Sbjct: 238 LFFSIANHTLTVVDVDAIYVKPFETETLLITPGQTTNVILKTKPSYPNATFFMTARPYVI 297

[Close]
BLAST of Cp4.1LG02g12890 vs. TrEMBL
Match: A0A151QZC4_CAJCA (Laccase-17 (Fragment) OS=Cajanus cajan GN=KK1_043341 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 6.2e-42
Identity = 92/128 (71.88%), Postives = 99/128 (77.34%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EAVIAQALQTGGGPN                        LKVKPG+TYLLRL+NAALNDE
Sbjct: 141 EAVIAQALQTGGGPNVSDAYTINGLPGPLYNCSANDTFKLKVKPGKTYLLRLINAALNDE 200

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHTL IVDVDAIYVKPF+T+T+LIAPGQT+NVLL+TK DYPNATF M ARPY T
Sbjct: 201 LFFSIANHTLTIVDVDAIYVKPFDTDTILIAPGQTSNVLLKTKSDYPNATFLMSARPYAT 260

[Close]
BLAST of Cp4.1LG02g12890 vs. TAIR10
Match: AT5G60020.1 (AT5G60020.1 laccase 17)

HSP 1 Score: 168.7 bits (426), Expect = 1.9e-42
Identity = 85/128 (66.41%), Postives = 96/128 (75.00%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EA+I QA QTGGGPN                        L+VKPG+TYLLRL+NAALNDE
Sbjct: 171 EAIIRQATQTGGGPNVSDAYTINGLPGPLYNCSAKDTFRLRVKPGKTYLLRLINAALNDE 230

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHT+ +V+ DAIYVKPFET T+LIAPGQTTNVLL+TK  YP+A+FFM ARPYVT
Sbjct: 231 LFFSIANHTVTVVEADAIYVKPFETETILIAPGQTTNVLLKTKSSYPSASFFMTARPYVT 290

[Close]
BLAST of Cp4.1LG02g12890 vs. TAIR10
Match: AT2G29130.1 (AT2G29130.1 laccase 2)

HSP 1 Score: 161.0 bits (406), Expect = 4.0e-40
Identity = 80/128 (62.50%), Postives = 93/128 (72.66%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           +AV+ QALQTG GPN                        L VKPG+TYLLRL+NAALNDE
Sbjct: 176 QAVVQQALQTGAGPNASDAHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLINAALNDE 235

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFF+IANHTL +V+ DA YVKPF+TN +L+ PGQTTNVLL+TKP YPNATF+MLARPY T
Sbjct: 236 LFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPIYPNATFYMLARPYFT 295

[Close]
BLAST of Cp4.1LG02g12890 vs. TAIR10
Match: AT2G38080.1 (AT2G38080.1 Laccase/Diphenol oxidase family protein)

HSP 1 Score: 98.6 bits (244), Expect = 2.4e-21
Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 1 

Query: 14  GPNLKVKPGRTYLLRLVNAALNDELFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTT 73
           G  L V+ G+TYLLRLVNAALN+ELFF +A H   +V+VDA+YVKPF+T+T+LIAPGQTT
Sbjct: 208 GYKLSVENGKTYLLRLVNAALNEELFFKVAGHIFTVVEVDAVYVKPFKTDTVLIAPGQTT 267

Query: 74  NVLLQTKPDYPNATFFMLARPYVTGQGTFDN 105
           NVLL          + + A P++      DN
Sbjct: 268 NVLLTASKS--AGKYLVTASPFMDAPIAVDN 296

[Close]
BLAST of Cp4.1LG02g12890 vs. TAIR10
Match: AT5G03260.1 (AT5G03260.1 laccase 11)

HSP 1 Score: 97.4 bits (241), Expect = 5.4e-21
Identity = 44/88 (50.00%), Postives = 63/88 (71.59%), Query Frame = 1 

Query: 17  LKVKPGRTYLLRLVNAALNDELFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVL 76
           ++ + G+TYLLR++NAALNDELFF IA H + +V++DA+Y KPF T  +L+ PGQTTNVL
Sbjct: 211 IEAEAGKTYLLRIINAALNDELFFGIAGHNMTVVEIDAVYTKPFTTKAILLGPGQTTNVL 270

Query: 77  LQTKPDYPNATFFMLARPYVTGQGTFDN 105
           ++T  D     +FM A P++    + DN
Sbjct: 271 VKT--DRSPNRYFMAASPFMDAPVSVDN 296

[Close]
BLAST of Cp4.1LG02g12890 vs. TAIR10
Match: AT1G18140.1 (AT1G18140.1 laccase 1)

HSP 1 Score: 95.1 bits (235), Expect = 2.7e-20
Identity = 45/87 (51.72%), Postives = 61/87 (70.11%), Query Frame = 1 

Query: 19  VKPGRTYLLRLVNAALNDELFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQ 78
           V  G+TY+LR++NAALN+ELF ++ANHTL +V+VDA+Y KP  T  ++IAPGQTT +LL+
Sbjct: 216 VDAGKTYILRIINAALNNELFVAVANHTLTVVEVDAVYTKPVHTKAIMIAPGQTTTLLLR 275

Query: 79  TKPDYPNATFFMLARPYVTGQGTFDNS 106
                    F + A PYVT    F+NS
Sbjct: 276 A-DQLSGGEFLIAATPYVTSVFPFNNS 301

[Close]
BLAST of Cp4.1LG02g12890 vs. NCBI nr
Match: gi|823220322|ref|XP_012442868.1| (PREDICTED: laccase-17-like [Gossypium raimondii])

HSP 1 Score: 183.0 bits (463), Expect = 2.8e-43
Identity = 94/128 (73.44%), Postives = 100/128 (78.12%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EAVI+QALQTGGGPN                        LKVKPG+TYLLRL+NAALNDE
Sbjct: 202 EAVISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDE 261

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHTL +VDVDAIYVKPFET TLLIAPGQTTNV+L+TKP YPNATFFM ARPYVT
Sbjct: 262 LFFSIANHTLTVVDVDAIYVKPFETETLLIAPGQTTNVILKTKPRYPNATFFMTARPYVT 321

[Close]
BLAST of Cp4.1LG02g12890 vs. NCBI nr
Match: gi|763789009|gb|KJB56005.1| (hypothetical protein B456_009G103200 [Gossypium raimondii])

HSP 1 Score: 183.0 bits (463), Expect = 2.8e-43
Identity = 94/128 (73.44%), Postives = 100/128 (78.12%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EAVI+QALQTGGGPN                        LKVKPG+TYLLRL+NAALNDE
Sbjct: 178 EAVISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDE 237

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHTL +VDVDAIYVKPFET TLLIAPGQTTNV+L+TKP YPNATFFM ARPYVT
Sbjct: 238 LFFSIANHTLTVVDVDAIYVKPFETETLLIAPGQTTNVILKTKPRYPNATFFMTARPYVT 297

[Close]
BLAST of Cp4.1LG02g12890 vs. NCBI nr
Match: gi|590612741|ref|XP_007022468.1| (Laccase 17 [Theobroma cacao])

HSP 1 Score: 182.2 bits (461), Expect = 4.7e-43
Identity = 94/128 (73.44%), Postives = 99/128 (77.34%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EAVI+QALQTGGGPN                        LKVKPGRTYLLRL+NAALNDE
Sbjct: 178 EAVISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGRTYLLRLINAALNDE 237

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHTL +VDVDAIYVKPFET TLLI PGQTTNVLL+TKP YP+ATFFM ARPYVT
Sbjct: 238 LFFSIANHTLTVVDVDAIYVKPFETETLLITPGQTTNVLLKTKPSYPSATFFMTARPYVT 297

[Close]
BLAST of Cp4.1LG02g12890 vs. NCBI nr
Match: gi|823265973|ref|XP_012465706.1| (PREDICTED: laccase-17-like [Gossypium raimondii])

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-42
Identity = 92/128 (71.88%), Postives = 99/128 (77.34%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EAVI+QALQTGGGPN                        LKVKPG+TYLLRLVNAALNDE
Sbjct: 178 EAVISQALQTGGGPNVSDAYTINGLPGPLYTCSAKDTFKLKVKPGKTYLLRLVNAALNDE 237

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHTL +VDVDA+YVKPF+T TLLI PGQTTNV+L+TKP YPNATFFM ARPYVT
Sbjct: 238 LFFSIANHTLTVVDVDAVYVKPFKTETLLITPGQTTNVILKTKPSYPNATFFMTARPYVT 297

[Close]
BLAST of Cp4.1LG02g12890 vs. NCBI nr
Match: gi|694327306|ref|XP_009354528.1| (PREDICTED: laccase-17-like [Pyrus x bretschneideri])

HSP 1 Score: 179.9 bits (455), Expect = 2.4e-42
Identity = 89/128 (69.53%), Postives = 102/128 (79.69%), Query Frame = 1 

Query: 2   EAVIAQALQTGGGPN------------------------LKVKPGRTYLLRLVNAALNDE 61
           EA+I+QALQTGGGPN                        LKV+PG+TYLLRL+NAALNDE
Sbjct: 181 EAIISQALQTGGGPNVSDAYTINGLPGPLYNCSAKDAFKLKVQPGKTYLLRLINAALNDE 240

Query: 62  LFFSIANHTLKIVDVDAIYVKPFETNTLLIAPGQTTNVLLQTKPDYPNATFFMLARPYVT 106
           LFFSIANHTLK+V+ DA+YVKPFET+T+LIAPGQTTNVLL+TKP++PNATFFM ARPYVT
Sbjct: 241 LFFSIANHTLKVVEADAVYVKPFETSTILIAPGQTTNVLLKTKPNFPNATFFMTARPYVT 300

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g12890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LAC17_ARATH3.4e-4166.41Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1[more]
LAC12_ORYSJ1.1e-3964.06Laccase-12 OS=Oryza sativa subsp. japonica GN=LAC12 PE=3 SV=2[more]
LAC13_ORYSJ1.1e-3964.06Laccase-13 OS=Oryza sativa subsp. japonica GN=LAC13 PE=2 SV=1[more]
LAC2_ARATH7.1e-3962.50Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1[more]
LAC10_ORYSJ9.0e-3458.02Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1[more]
BLAST of Cp4.1LG02g12890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2UJM9_GOSRA1.9e-4373.44Laccase OS=Gossypium raimondii GN=B456_009G103200 PE=3 SV=1[more]
A0A061FAR0_THECC3.3e-4373.44Laccase OS=Theobroma cacao GN=TCM_032988 PE=3 SV=1[more]
A0A0D2V8A5_GOSRA9.6e-4371.88Laccase OS=Gossypium raimondii GN=B456_013G025500 PE=3 SV=1[more]
A0A0D2W207_GOSRA1.6e-4271.88Laccase OS=Gossypium raimondii GN=B456_013G021400 PE=3 SV=1[more]
A0A151QZC4_CAJCA6.2e-4271.88Laccase-17 (Fragment) OS=Cajanus cajan GN=KK1_043341 PE=3 SV=1[more]
BLAST of Cp4.1LG02g12890 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G60020.11.9e-4266.41 laccase 17[more]
AT2G29130.14.0e-4062.50 laccase 2[more]
AT2G38080.12.4e-2153.85 Laccase/Diphenol oxidase family protein[more]
AT5G03260.15.4e-2150.00 laccase 11[more]
AT1G18140.12.7e-2051.72 laccase 1[more]
BLAST of Cp4.1LG02g12890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|823220322|ref|XP_012442868.1|2.8e-4373.44PREDICTED: laccase-17-like [Gossypium raimondii][more]
gi|763789009|gb|KJB56005.1|2.8e-4373.44hypothetical protein B456_009G103200 [Gossypium raimondii][more]
gi|590612741|ref|XP_007022468.1|4.7e-4373.44Laccase 17 [Theobroma cacao][more]
gi|823265973|ref|XP_012465706.1|1.4e-4271.88PREDICTED: laccase-17-like [Gossypium raimondii][more]
gi|694327306|ref|XP_009354528.1|2.4e-4269.53PREDICTED: laccase-17-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR008972Cupredoxin
IPR001117Cu-oxidase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0046274 lignin catabolic process
cellular_component GO:0005576 extracellular region
cellular_component GO:0048046 apoplast
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0052716 hydroquinone:oxygen oxidoreductase activity
molecular_function GO:0016722 oxidoreductase activity, oxidizing metal ions
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g12890.1Cp4.1LG02g12890.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001117Multicopper oxidase, type 1PFAMPF00394Cu-oxidasecoord: 14..99
score: 2.1
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 14..102
score: 2.5
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 12..97
score: 1.54
NoneNo IPR availablePANTHERPTHR11709MULTI-COPPER OXIDASEcoord: 4..105
score: 6.0
NoneNo IPR availablePANTHERPTHR11709:SF66LACCASE-17coord: 4..105
score: 6.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g12890CmaCh01G005400Cucurbita maxima (Rimu)cmacpeB491
Cp4.1LG02g12890CmoCh01G005700Cucurbita moschata (Rifu)cmocpeB449
Cp4.1LG02g12890ClCG03G002240Watermelon (Charleston Gray)cpewcgB500
Cp4.1LG02g12890MELO3C005052.2Melon (DHL92) v3.6.1cpemedB581
Cp4.1LG02g12890CsaV3_1G012920Cucumber (Chinese Long) v3cpecucB0657
Cp4.1LG02g12890Bhi08G000269Wax gourdcpewgoB0699
Cp4.1LG02g12890Bhi03G001232Wax gourdcpewgoB0695
Cp4.1LG02g12890CsGy1G012770Cucumber (Gy14) v2cgybcpeB090
Cp4.1LG02g12890Carg21060Silver-seed gourdcarcpeB1023
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g12890Wax gourdcpewgoB0707
Cp4.1LG02g12890Wax gourdcpewgoB0692
Cp4.1LG02g12890Wax gourdcpewgoB0708
Cp4.1LG02g12890Cucurbita pepo (Zucchini)cpecpeB300
Cp4.1LG02g12890Cucurbita pepo (Zucchini)cpecpeB432
Cp4.1LG02g12890Cucurbita pepo (Zucchini)cpecpeB458
Cp4.1LG02g12890Cucumber (Gy14) v1cgycpeB0583
Cp4.1LG02g12890Cucurbita maxima (Rimu)cmacpeB237
Cp4.1LG02g12890Cucurbita maxima (Rimu)cmacpeB637
Cp4.1LG02g12890Cucurbita moschata (Rifu)cmocpeB205
Cp4.1LG02g12890Cucurbita moschata (Rifu)cmocpeB587
Cp4.1LG02g12890Wild cucumber (PI 183967)cpecpiB530
Cp4.1LG02g12890Cucumber (Chinese Long) v2cpecuB528
Cp4.1LG02g12890Bottle gourd (USVL1VR-Ls)cpelsiB435
Cp4.1LG02g12890Bottle gourd (USVL1VR-Ls)cpelsiB440
Cp4.1LG02g12890Watermelon (Charleston Gray)cpewcgB498
Cp4.1LG02g12890Watermelon (97103) v1cpewmB548
Cp4.1LG02g12890Watermelon (97103) v1cpewmB580
Cp4.1LG02g12890Melon (DHL92) v3.5.1cpemeB490
Cp4.1LG02g12890Cucumber (Gy14) v2cgybcpeB386
Cp4.1LG02g12890Cucumber (Gy14) v2cgybcpeB824
Cp4.1LG02g12890Melon (DHL92) v3.6.1cpemedB580
Cp4.1LG02g12890Silver-seed gourdcarcpeB0427
Cp4.1LG02g12890Silver-seed gourdcarcpeB0472
Cp4.1LG02g12890Silver-seed gourdcarcpeB0622
Cp4.1LG02g12890Cucumber (Chinese Long) v3cpecucB0725