Cp4.1LG02g11780 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGTTGGAGGGCTAGTGAATGCAACATGTGGGAATGCAACAGAGTTGATATTAGCAATGTTAGCTTTACACCAAAACAAAATCCACATCTTGAAATTCTCCCTTTTGGGTTCCATTCTTTCCAATTTACTTCTAGTTCTTGGCACATCTCTTCTCTTTGGAGGCTTATCCAATCTCAACAAGCAACAAACATTCAACCCAGTAAGCCAAAAACAAAAATACTTTCAAATCGAACACGTTCGAGAAACAAGAAACAAGAACATTAACATTATCGATCATGTTTTCTCAACAGAAAGTCGCGAACGTAAGCTCTTTAGTGTTGCTACTCGGATTGCTATGCCAAATGCTGCCATTGATATCAAGATTTGCATCACCATCAGCTAAATTATGGACAGATTTGTCTGTTCTAGAGCTATCAAGAACTTGCAGCATCATAATGCTCATAGCTTATCTTGTTTATGTGTTCTTCCAATTGAAAACCCATAACCAATTTTTTGGTCTACCAGAGGTGATTATTCAAACTCTCTTGAACTCTAAGTATAATTTGTTGTCTAAACATGTGATGAATGGGTTGAATAGGAGGAAGAGGATGATGAAGAAATGGCAATAATTGGGGTTTGGAGCTCGTTTGGTTGGCTGGTGGGTATGACCATTGTCATAGCTGTTCTATCACAGTATGTTGTGGCTACAATTGAGGTATATTTCATTGAAAGCCTTTCTTTTTGTGTTTGTTTCCAAGAAATTATGGGTTTTTGTTGAGCGTAGGAGGCATCACAATCATGGGGAGTTTCGGTGAGCTTTATGAGTATAATTGTGCTGCCGATTATGGGTAATGCAGCTGAGCATGCTGGGTCGGTTATATTTGCTGTGAAGAACAAATTGGTATGTTTACATGTAACCGTTCAAGTCCATCGCTATCGGATATGATCTTCTTTGAGTTTTTCCTTTTGGGTTTTTCTTCGGTGTTTTAAAAACGGTATGTTAGGAATGTTAGGATCGATACCAGTTGTTAGGATCGCACAACAACGCACACGCTCGATCTAGATGAACACAAAGAGAAGGATAGAGAGAAGTTGCAAGGAGAACTCTGGCTAAAAGGATTTTTTATTGATGACTTCAGGCATGTACAACAAGAGAGTACAGAGAATAGAAAAGTACATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTAGGATCGATACCAGTTGTTAGGATCGCACAACAACGCACACGCTCGATCTAGATGAACACAAAGAGAAGGATAGAGAGAAGTTGCAAGGAGAACTCTGGCTAAAAGGATTTTTTATTGATGACTTCAGGCATGTACAACAAGAGAGTACAGAGAATAGAAAAGTACATTTTCAAAGCTATACCGGACCAGATATATATAGGGTATATTTTACTATATATAGCTTTACCAGATTTAGCCTTTACCATATATAGCTTTACTATATATAGCTTTACCAAATATAGCTTTACCGGATATAACCGTTGACCAAGCTATAAATAAGTATCAGGCTCCATAGCCTAACAAGGAAGAGGTTTCCACACCCTTATAATGCTTCGTTCTTCTCACTAACCGATGTGAGATCTCATAATCTACCCCCTTCGAGGCCTAGCGTTCTCGTTGGCACTTGTTCCCTTCTCCAATTGATGTGGGACCTCCTAATCCATCCCCCTTCTAGGCCCAGCAGTTTTCTTCCTGGCAAACCACCGTGTGTCCACCCTCTTTGGGGCTCAACCTCCTTACTGGCATATCGTCCGGTGTCTGGCTCTTATACCATTTGTAACCGCCCAAGCCCACCCCTAGTATGACTTTTCTTTTTGGGTTTCTCTTCAATATTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACTCCTATAAAGAATGTTTCGTTCTCCTCCCCAACTGATGTGAAATCTCACAATCCANCCCCCCCCCCCCCCTTCGAGATCCAGCAGTCTCGTGTCCACTCCCTTTCAGTTCTCAGCCTCCTCGTTGGCACATTGTCTGGGGTCGGGCTCTTTATACCATTTGTAACCGCCCAAGCCCACCCCTAGCATGACTTTTCCTTTCGGGTTTCTCTTCAAGATTTTTAAAGCGCATTTGTTGGGGAGATGTATCCACACTCTTATAAAGAATGTTTCGTTTTCTTCAATCGATGTGGGATCTCACAATCCACCCTTTTTGGGACCTAGTGTCCTTATTGACACACCGTCTCGTGTCCACTCCCCTTTGGGGCTCAGCCTCCTCGCTCGCACATTGCCCGATGTCTGGCTCTAATATCATTTGTAACAGCCCAAGTCCACCGCTAGCAGATATTGTCCTATTTGAGATTTTTCTTTCCGGTTTCCCCTCAAAATTCTTAAAACATGTCTACTAGGAAGAGGTTTCCACACCATTGTAAAGAACATTTCGTTCTCCTCCCCAACCGACGTGGAATCTCACACAAATCCTAAAGCATTAAGAACATACCACACCCGACCTAGAAAACATCACTTACTTATTTTGGTTGTTGTTGTTGTTGTGTAGGATATAACACTTGGGATAGCATTGGGATCAGCAGCTCAAATTTCACTGTTTGCGGTAATAAATTAGTAGTAAAAAAAAGAGGGTTAATGAAGATGAATAAGTTTATGATGATATGAACGTTTCAATTATTAGGTGCCTTTGAGTGTAGCTGTTGGATGGTGTTCGGGCATCAAAATGGATCTTGATTTCGGTCTCATCGAAACCGCGTCTCTCGCCTTCGCCATCGTCCTCACTCTATTCACTCTACAG ATGGCAGTTGGAGGGCTAGTGAATGCAACATGTGGGAATGCAACAGAGTTGATATTAGCAATGTTAGCTTTACACCAAAACAAAATCCACATCTTGAAATTCTCCCTTTTGGGTTCCATTCTTTCCAATTTACTTCTAGTTCTTGGCACATCTCTTCTCTTTGGAGGCTTATCCAATCTCAACAAGCAACAAACATTCAACCCAAAAGTCGCGAACGTAAGCTCTTTAGTGTTGCTACTCGGATTGCTATGCCAAATGCTGCCATTGATATCAAGATTTGCATCACCATCAGCTAAATTATGGACAGATTTGTCTGTTCTAGAGCTATCAAGAACTTGCAGCATCATAATGCTCATAGCTTATCTTGTTTATGTGTTCTTCCAATTGAAAACCCATAACCAATTTTTTGGTCTACCAGAGGAGGAAGAGGATGATGAAGAAATGGCAATAATTGGGGTTTGGAGCTCGTTTGGTTGGCTGGTGGGTATGACCATTGTCATAGCTGTTCTATCACAGTATGTTGTGGCTACAATTGAGGATATAACACTTGGGATAGCATTGGGATCAGCAGCTCAAATTTCACTGTTTGCGGTGCCTTTGAGTGTAGCTGTTGGATGGTGTTCGGGCATCAAAATGGATCTTGATTTCGGTCTCATCGAAACCGCGTCTCTCGCCTTCGCCATCGTCCTCACTCTATTCACTCTACAG ATGGCAGTTGGAGGGCTAGTGAATGCAACATGTGGGAATGCAACAGAGTTGATATTAGCAATGTTAGCTTTACACCAAAACAAAATCCACATCTTGAAATTCTCCCTTTTGGGTTCCATTCTTTCCAATTTACTTCTAGTTCTTGGCACATCTCTTCTCTTTGGAGGCTTATCCAATCTCAACAAGCAACAAACATTCAACCCAAAAGTCGCGAACGTAAGCTCTTTAGTGTTGCTACTCGGATTGCTATGCCAAATGCTGCCATTGATATCAAGATTTGCATCACCATCAGCTAAATTATGGACAGATTTGTCTGTTCTAGAGCTATCAAGAACTTGCAGCATCATAATGCTCATAGCTTATCTTGTTTATGTGTTCTTCCAATTGAAAACCCATAACCAATTTTTTGGTCTACCAGAGGAGGAAGAGGATGATGAAGAAATGGCAATAATTGGGGTTTGGAGCTCGTTTGGTTGGCTGGTGGGTATGACCATTGTCATAGCTGTTCTATCACAGTATGTTGTGGCTACAATTGAGGATATAACACTTGGGATAGCATTGGGATCAGCAGCTCAAATTTCACTGTTTGCGGTGCCTTTGAGTGTAGCTGTTGGATGGTGTTCGGGCATCAAAATGGATCTTGATTTCGGTCTCATCGAAACCGCGTCTCTCGCCTTCGCCATCGTCCTCACTCTATTCACTCTACAG MAVGGLVNATCGNATELILAMLALHQNKIHILKFSLLGSILSNLLLVLGTSLLFGGLSNLNKQQTFNPKVANVSSLVLLLGLLCQMLPLISRFASPSAKLWTDLSVLELSRTCSIIMLIAYLVYVFFQLKTHNQFFGLPEEEEDDEEMAIIGVWSSFGWLVGMTIVIAVLSQYVVATIEDITLGIALGSAAQISLFAVPLSVAVGWCSGIKMDLDFGLIETASLAFAIVLTLFTLQ
BLAST of Cp4.1LG02g11780 vs. Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.4e-55 Identity = 139/283 (49.12%), Postives = 186/283 (65.72%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. Swiss-Prot
Match: CAX4_ARATH (Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2) HSP 1 Score: 203.8 bits (517), Expect = 2.1e-51 Identity = 130/284 (45.77%), Postives = 176/284 (61.97%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3) HSP 1 Score: 202.6 bits (514), Expect = 4.8e-51 Identity = 131/281 (46.62%), Postives = 181/281 (64.41%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. Swiss-Prot
Match: CAX1C_ORYSJ (Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 7.6e-49 Identity = 124/279 (44.44%), Postives = 176/279 (63.08%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 5.7e-44 Identity = 125/283 (44.17%), Postives = 170/283 (60.07%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. TrEMBL
Match: J7KG37_CUCSA (Cation exchanger CAX4 OS=Cucumis sativus GN=CAX4 PE=2 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 8.4e-87 Identity = 183/278 (65.83%), Postives = 211/278 (75.90%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. TrEMBL
Match: A0A0S3S6D2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G182000 PE=3 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.9e-70 Identity = 153/273 (56.04%), Postives = 194/273 (71.06%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. TrEMBL
Match: A0A0L9VCE7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g124600 PE=3 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.9e-70 Identity = 153/273 (56.04%), Postives = 194/273 (71.06%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. TrEMBL
Match: V7BNX9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G067900g PE=3 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 9.3e-70 Identity = 152/273 (55.68%), Postives = 193/273 (70.70%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. TrEMBL
Match: A0A061GW86_THECC (Vacuolar cation/proton exchanger 3 isoform 1 OS=Theobroma cacao GN=TCM_041626 PE=3 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 4.6e-69 Identity = 154/273 (56.41%), Postives = 193/273 (70.70%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. TAIR10
Match: AT3G51860.1 (AT3G51860.1 cation exchanger 3) HSP 1 Score: 216.9 bits (551), Expect = 1.4e-56 Identity = 139/283 (49.12%), Postives = 186/283 (65.72%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. TAIR10
Match: AT5G01490.1 (AT5G01490.1 cation exchanger 4) HSP 1 Score: 203.8 bits (517), Expect = 1.2e-52 Identity = 130/284 (45.77%), Postives = 176/284 (61.97%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. TAIR10
Match: AT2G38170.3 (AT2G38170.3 cation exchanger 1) HSP 1 Score: 202.6 bits (514), Expect = 2.7e-52 Identity = 131/281 (46.62%), Postives = 181/281 (64.41%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. TAIR10
Match: AT3G13320.1 (AT3G13320.1 cation exchanger 2) HSP 1 Score: 144.8 bits (364), Expect = 6.7e-35 Identity = 105/280 (37.50%), Postives = 152/280 (54.29%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. TAIR10
Match: AT1G55730.1 (AT1G55730.1 cation exchanger 5) HSP 1 Score: 141.4 bits (355), Expect = 7.4e-34 Identity = 101/280 (36.07%), Postives = 148/280 (52.86%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. NCBI nr
Match: gi|789503194|ref|NP_001292678.1| (vacuolar cation/proton exchanger 3-like [Cucumis sativus]) HSP 1 Score: 328.2 bits (840), Expect = 1.2e-86 Identity = 183/278 (65.83%), Postives = 211/278 (75.90%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. NCBI nr
Match: gi|659115077|ref|XP_008457375.1| (PREDICTED: vacuolar cation/proton exchanger 3-like [Cucumis melo]) HSP 1 Score: 328.2 bits (840), Expect = 1.2e-86 Identity = 185/277 (66.79%), Postives = 213/277 (76.90%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. NCBI nr
Match: gi|470116133|ref|XP_004294240.1| (PREDICTED: vacuolar cation/proton exchanger 3-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 280.8 bits (717), Expect = 2.2e-72 Identity = 157/273 (57.51%), Postives = 196/273 (71.79%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. NCBI nr
Match: gi|694398105|ref|XP_009374246.1| (PREDICTED: vacuolar cation/proton exchanger 3-like [Pyrus x bretschneideri]) HSP 1 Score: 275.0 bits (702), Expect = 1.2e-70 Identity = 159/278 (57.19%), Postives = 195/278 (70.14%), Query Frame = 1
BLAST of Cp4.1LG02g11780 vs. NCBI nr
Match: gi|965601172|dbj|BAT88350.1| (hypothetical protein VIGAN_05182000 [Vigna angularis var. angularis]) HSP 1 Score: 273.9 bits (699), Expect = 2.7e-70 Identity = 153/273 (56.04%), Postives = 194/273 (71.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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