Cp4.1LG02g11170 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG02g11170
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG02 : 10160778 .. 10163424 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTTGTAAACCCTAAGCCCAAGGTTTCATCATCGACAGTTCTTCTGAACTCTCCTTCGAGTTCCTCCATGTCCATTCGAACCTCTGCCTTCGCCACCGTCACCCTTCTCCGCTCTCTCACTCTTTCCTTCCCTCTATGCCACCACCACTTCCGTTGCCGGAACTACGTCATCCGTTCTCTCTCTATCCCAACATATTCAGCGAAAGGACGACGACAACTTACGAGGATTCCTGCCTTTGCTTCCAGTTCTTCCGTTGAAGCGTTGGTGCATGACCGGGATTCCCCGGCCGAATCTGAAGAGCCTTTGTGTTCTCCATACAGTACTGGCGCTGAGGGGTTTGCGTCGGCGGATTTGAAACACTTGGGAGCGCCTGCGCTTGAAGTCAAGGAGCTGGATGAGTTGCCGGAGCAATGGCGTAGATCCAAATTGGCTTGGCTTTGTAAAGAATTGCCGGCACATAAGCCGGGAACATTGATACGACTGCTTAATGCTCAGAGGAAATGGATGAAGCAGGATGATGCGGCCTATGTCATCGTGCATTGTTTGCGTATTCGCGAAAATGAGACTGCTTTTAGGGTTAGTTTTCGTTTTGATTCTATTATGTTCTACTATAACACCCGCAAAATACACGTTCGTATAAGTATAGCTACTTGGAATGCAATTGATAGGAAAGTTATTTGGAAGTGTGCAATTTCTGGAATATTGTTGTGCTTTGTTCTTTAGAATCTATGTTTGTGATATTGTTTTCTTCCCATTTCTTAATTTTCTTCATTTTTGAGATTAGGTGTACAAGTGGATGATGCAACAACATTGGTACCGATTTGATTATGCTTTAGCTACTAAGCTTGCTGATTACATGGGCAAGGAACGGAAGTTCTCAAAGTGTCGGGAAGTATTTGATGATATAATTAATCAGGGATGTGTGCCAAGTGAATCCACATTTCATATATTGATTGTTGCCTACCTTAGTGCACCTATCCAAGGATGCATAGAGGAAGCAAGTGCCATTTACAATCGTATGATTCAGTTAGGAGGTTACGAACCACGTCTTAGCTTGCACAATTCTCTCTTTAAAGCTCTCTTGAGCAAACCAGGGGATTTGTCAAAGCATCATCTTAAACAGGCTGAGTTCATATATCACAATCTGGTAACAACTGGACTTGAGTTGCATAAAGATATATATGCTGGTCTAATTTGGCTACATAGTTATCAGGATACTGTAGACAAAGAAAGGATAATGTCACTAAGGAAAGAAATGCAACAAGCAGGAATTGAGGAAGAAAGAGAAGTCCTTGTATCCATCTTGAGAGCGAGCTCGAAATTGGGGGATGTGATGGAAGCAGAAAGATCGTGGCTTAAACTTAAGTCTTTTGATGGTAGCATGCCATCTCAGGCTTTTGTTTACAAAATGGAAGTATATGCAAAGGTGGGTAATCCGATGAAAGCTTTCGAGATATTTAGGGAGATGGAGCAGTTGAACTCTGTAAGTGCTGCAGCATATCAGACAATTATTGGGATTTTATGTAAAGTTGAAGAGGTAACACTTGCAGAATCCGTCATGGAAGGCTTCATAAAGAGTAATTTAAAGCCCCTCAAGCCAGCTTATGTTGATTTGATGAATATGTTTTTCAATTTAAGCTTACATGATAAGTTAGAGTTAACCTTCTCCCAGTGCCTTGAGAAGTGTAAACCAAATCGTACTATTTACAGCATATATTTGAACTCTTTGGTAAAAGTTGGTAATCTCGACAGGGCTGAAGAAATATTTAGCCAGATGCAAACAAATGGAGAAATTGGTGTAAGTGCTCGTTCATGCAACATTATTTTAAGTGGGTACCTGTTAAGTGGGGATTATTTGAAGGCTGAAAAAATATATGATTTGATGTGTCAGAAAAAGTACGACATTGATCCTCCATTAATGGAGAAACTTGATTATGTCCTAAGCTTGAGTAGGAAGGAGATTAAGAAGCCAGTAAGCTTGAAGTTGAGTAAAGAACAAAGGGAGATTTTAGTAGGGTTGTTATTAGGTGGCCTGGAGATCGAATCTGATGAAGGGAGGAAGAATCATAGGATCCAATTTGAATTCCACGAAGATCGTAGCACCCACTCTCGTTTGAGGAGACACATATATGAGCAATATCATGAGTGGTTACATCCTGCTTCAAAGTCAAGCGATAGTGATACAGATATACCATATAAATTCTGCACCGTTTCGCATTCATATTTTGGTTTCTATGCCGATCAGTTTTGGCCACGAGGCCATCCTGCAATCCCTAATCTAATTCACCGGTGGCTTTCACCTCGTGTTCTTGCTTACTGGTACATGTATGGAGGCTGCAGGATATCGTCAGGGGATTTCGTACTGAAGCTAAAGGGAAGTCGTGAGGGTGTTGCGAAGATTGTTAAATCTCTGGGAGAAAAGTCCATGTCTTGCAAGGTGAAAAGGAAGGGCAGGGTGTATTGGATAGGCTTACTTGGAAGCAACGCCACATGGTTCTGGAAACTAATTGAACCTTTCATTCTGGATGACTTGAAAGATAGGTTACAGGCAGACAGCCTTAACATGGAGAAGGCTGTAAATGAAACTTACAATATCAACTTTGATAGTCAATCTGATTCCGATGAGGAGGCGTCTAGTTAG

mRNA sequence

ATGAACCTTGTAAACCCTAAGCCCAAGGTTTCATCATCGACAGTTCTTCTGAACTCTCCTTCGAGTTCCTCCATGTCCATTCGAACCTCTGCCTTCGCCACCGTCACCCTTCTCCGCTCTCTCACTCTTTCCTTCCCTCTATGCCACCACCACTTCCGTTGCCGGAACTACGTCATCCGTTCTCTCTCTATCCCAACATATTCAGCGAAAGGACGACGACAACTTACGAGGATTCCTGCCTTTGCTTCCAGTTCTTCCGTTGAAGCGTTGGTGCATGACCGGGATTCCCCGGCCGAATCTGAAGAGCCTTTGTGTTCTCCATACAGTACTGGCGCTGAGGGGTTTGCGTCGGCGGATTTGAAACACTTGGGAGCGCCTGCGCTTGAAGTCAAGGAGCTGGATGAGTTGCCGGAGCAATGGCGTAGATCCAAATTGGCTTGGCTTTGTAAAGAATTGCCGGCACATAAGCCGGGAACATTGATACGACTGCTTAATGCTCAGAGGAAATGGATGAAGCAGGATGATGCGGCCTATGTCATCGTGCATTGTTTGCGTATTCGCGAAAATGAGACTGCTTTTAGGGTGTACAAGTGGATGATGCAACAACATTGGTACCGATTTGATTATGCTTTAGCTACTAAGCTTGCTGATTACATGGGCAAGGAACGGAAGTTCTCAAAGTGTCGGGAAGTATTTGATGATATAATTAATCAGGGATGTGTGCCAAGTGAATCCACATTTCATATATTGATTGTTGCCTACCTTAGTGCACCTATCCAAGGATGCATAGAGGAAGCAAGTGCCATTTACAATCGTATGATTCAGTTAGGAGGTTACGAACCACGTCTTAGCTTGCACAATTCTCTCTTTAAAGCTCTCTTGAGCAAACCAGGGGATTTGTCAAAGCATCATCTTAAACAGGCTGAGTTCATATATCACAATCTGGTAACAACTGGACTTGAGTTGCATAAAGATATATATGCTGGTCTAATTTGGCTACATAGTTATCAGGATACTGTAGACAAAGAAAGGATAATGTCACTAAGGAAAGAAATGCAACAAGCAGGAATTGAGGAAGAAAGAGAAGTCCTTGTATCCATCTTGAGAGCGAGCTCGAAATTGGGGGATGTGATGGAAGCAGAAAGATCGTGGCTTAAACTTAAGTCTTTTGATGGTAGCATGCCATCTCAGGCTTTTGTTTACAAAATGGAAGTATATGCAAAGGTGGGTAATCCGATGAAAGCTTTCGAGATATTTAGGGAGATGGAGCAGTTGAACTCTGTAAGTGCTGCAGCATATCAGACAATTATTGGGATTTTATGTAAAGTTGAAGAGGTAACACTTGCAGAATCCGTCATGGAAGGCTTCATAAAGAGTAATTTAAAGCCCCTCAAGCCAGCTTATGTTGATTTGATGAATATGTTTTTCAATTTAAGCTTACATGATAAGTTAGAGTTAACCTTCTCCCAGTGCCTTGAGAAGTGTAAACCAAATCGTACTATTTACAGCATATATTTGAACTCTTTGGTAAAAGTTGGTAATCTCGACAGGGCTGAAGAAATATTTAGCCAGATGCAAACAAATGGAGAAATTGGTGTAAGTGCTCGTTCATGCAACATTATTTTAAGTGGGTACCTGTTAAGTGGGGATTATTTGAAGGCTGAAAAAATATATGATTTGATGTGTCAGAAAAAGTACGACATTGATCCTCCATTAATGGAGAAACTTGATTATGTCCTAAGCTTGAGTAGGAAGGAGATTAAGAAGCCAGTAAGCTTGAAGTTGAGTAAAGAACAAAGGGAGATTTTAGTAGGGTTGTTATTAGGTGGCCTGGAGATCGAATCTGATGAAGGGAGGAAGAATCATAGGATCCAATTTGAATTCCACGAAGATCGTAGCACCCACTCTCGTTTGAGGAGACACATATATGAGCAATATCATGAGTGGTTACATCCTGCTTCAAAGTCAAGCGATAGTGATACAGATATACCATATAAATTCTGCACCGTTTCGCATTCATATTTTGGTTTCTATGCCGATCAGTTTTGGCCACGAGGCCATCCTGCAATCCCTAATCTAATTCACCGGTGGCTTTCACCTCGTGTTCTTGCTTACTGGTACATGTATGGAGGCTGCAGGATATCGTCAGGGGATTTCGTACTGAAGCTAAAGGGAAGTCGTGAGGGTGTTGCGAAGATTGTTAAATCTCTGGGAGAAAAGTCCATGTCTTGCAAGGTGAAAAGGAAGGGCAGGGTGTATTGGATAGGCTTACTTGGAAGCAACGCCACATGGTTCTGGAAACTAATTGAACCTTTCATTCTGGATGACTTGAAAGATAGGTTACAGGCAGACAGCCTTAACATGGAGAAGGCTGTAAATGAAACTTACAATATCAACTTTGATAGTCAATCTGATTCCGATGAGGAGGCGTCTAGTTAG

Coding sequence (CDS)

ATGAACCTTGTAAACCCTAAGCCCAAGGTTTCATCATCGACAGTTCTTCTGAACTCTCCTTCGAGTTCCTCCATGTCCATTCGAACCTCTGCCTTCGCCACCGTCACCCTTCTCCGCTCTCTCACTCTTTCCTTCCCTCTATGCCACCACCACTTCCGTTGCCGGAACTACGTCATCCGTTCTCTCTCTATCCCAACATATTCAGCGAAAGGACGACGACAACTTACGAGGATTCCTGCCTTTGCTTCCAGTTCTTCCGTTGAAGCGTTGGTGCATGACCGGGATTCCCCGGCCGAATCTGAAGAGCCTTTGTGTTCTCCATACAGTACTGGCGCTGAGGGGTTTGCGTCGGCGGATTTGAAACACTTGGGAGCGCCTGCGCTTGAAGTCAAGGAGCTGGATGAGTTGCCGGAGCAATGGCGTAGATCCAAATTGGCTTGGCTTTGTAAAGAATTGCCGGCACATAAGCCGGGAACATTGATACGACTGCTTAATGCTCAGAGGAAATGGATGAAGCAGGATGATGCGGCCTATGTCATCGTGCATTGTTTGCGTATTCGCGAAAATGAGACTGCTTTTAGGGTGTACAAGTGGATGATGCAACAACATTGGTACCGATTTGATTATGCTTTAGCTACTAAGCTTGCTGATTACATGGGCAAGGAACGGAAGTTCTCAAAGTGTCGGGAAGTATTTGATGATATAATTAATCAGGGATGTGTGCCAAGTGAATCCACATTTCATATATTGATTGTTGCCTACCTTAGTGCACCTATCCAAGGATGCATAGAGGAAGCAAGTGCCATTTACAATCGTATGATTCAGTTAGGAGGTTACGAACCACGTCTTAGCTTGCACAATTCTCTCTTTAAAGCTCTCTTGAGCAAACCAGGGGATTTGTCAAAGCATCATCTTAAACAGGCTGAGTTCATATATCACAATCTGGTAACAACTGGACTTGAGTTGCATAAAGATATATATGCTGGTCTAATTTGGCTACATAGTTATCAGGATACTGTAGACAAAGAAAGGATAATGTCACTAAGGAAAGAAATGCAACAAGCAGGAATTGAGGAAGAAAGAGAAGTCCTTGTATCCATCTTGAGAGCGAGCTCGAAATTGGGGGATGTGATGGAAGCAGAAAGATCGTGGCTTAAACTTAAGTCTTTTGATGGTAGCATGCCATCTCAGGCTTTTGTTTACAAAATGGAAGTATATGCAAAGGTGGGTAATCCGATGAAAGCTTTCGAGATATTTAGGGAGATGGAGCAGTTGAACTCTGTAAGTGCTGCAGCATATCAGACAATTATTGGGATTTTATGTAAAGTTGAAGAGGTAACACTTGCAGAATCCGTCATGGAAGGCTTCATAAAGAGTAATTTAAAGCCCCTCAAGCCAGCTTATGTTGATTTGATGAATATGTTTTTCAATTTAAGCTTACATGATAAGTTAGAGTTAACCTTCTCCCAGTGCCTTGAGAAGTGTAAACCAAATCGTACTATTTACAGCATATATTTGAACTCTTTGGTAAAAGTTGGTAATCTCGACAGGGCTGAAGAAATATTTAGCCAGATGCAAACAAATGGAGAAATTGGTGTAAGTGCTCGTTCATGCAACATTATTTTAAGTGGGTACCTGTTAAGTGGGGATTATTTGAAGGCTGAAAAAATATATGATTTGATGTGTCAGAAAAAGTACGACATTGATCCTCCATTAATGGAGAAACTTGATTATGTCCTAAGCTTGAGTAGGAAGGAGATTAAGAAGCCAGTAAGCTTGAAGTTGAGTAAAGAACAAAGGGAGATTTTAGTAGGGTTGTTATTAGGTGGCCTGGAGATCGAATCTGATGAAGGGAGGAAGAATCATAGGATCCAATTTGAATTCCACGAAGATCGTAGCACCCACTCTCGTTTGAGGAGACACATATATGAGCAATATCATGAGTGGTTACATCCTGCTTCAAAGTCAAGCGATAGTGATACAGATATACCATATAAATTCTGCACCGTTTCGCATTCATATTTTGGTTTCTATGCCGATCAGTTTTGGCCACGAGGCCATCCTGCAATCCCTAATCTAATTCACCGGTGGCTTTCACCTCGTGTTCTTGCTTACTGGTACATGTATGGAGGCTGCAGGATATCGTCAGGGGATTTCGTACTGAAGCTAAAGGGAAGTCGTGAGGGTGTTGCGAAGATTGTTAAATCTCTGGGAGAAAAGTCCATGTCTTGCAAGGTGAAAAGGAAGGGCAGGGTGTATTGGATAGGCTTACTTGGAAGCAACGCCACATGGTTCTGGAAACTAATTGAACCTTTCATTCTGGATGACTTGAAAGATAGGTTACAGGCAGACAGCCTTAACATGGAGAAGGCTGTAAATGAAACTTACAATATCAACTTTGATAGTCAATCTGATTCCGATGAGGAGGCGTCTAGTTAG

Protein sequence

MNLVNPKPKVSSSTVLLNSPSSSSMSIRTSAFATVTLLRSLTLSFPLCHHHFRCRNYVIRSLSIPTYSAKGRRQLTRIPAFASSSSVEALVHDRDSPAESEEPLCSPYSTGAEGFASADLKHLGAPALEVKELDELPEQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYVIVHCLRIRENETAFRVYKWMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSKPGDLSKHHLKQAEFIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREMEQLNSVSAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPNRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVGLLLGGLEIESDEGRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWLHPASKSSDSDTDIPYKFCTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKGSREGVAKIVKSLGEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDRLQADSLNMEKAVNETYNINFDSQSDSDEEASS
BLAST of Cp4.1LG02g11170 vs. Swiss-Prot
Match: PP154_ARATH (Pentatricopeptide repeat-containing protein At2g15820, chloroplastic OS=Arabidopsis thaliana GN=OTP51 PE=2 SV=3)

HSP 1 Score: 886.7 bits (2290), Expect = 1.9e-256
Identity = 452/816 (55.39%), Postives = 606/816 (74.26%), Query Frame = 1

Query: 11  SSSTVLLNSPSSSSMSIRTSAF-ATVTLLRSLTLSFPLCHHHFRCRNYVIRSLSIPTYSA 70
           SSSTV + + + SS+S   +   ++ TL RSL  SF L  H        +R LSI T   
Sbjct: 29  SSSTVSVTTFNISSLSSNPNIINSSSTLFRSL--SFSLIRHRSSYSRRSLRRLSIHTVHG 88

Query: 71  KGRRQLTRI-----PAFASSSSVE---ALVHDRDSPAESEEPLCSPYSTGAEGFASADLK 130
              +  +       P F ++S+ +     V       ESEE +      G    A  D++
Sbjct: 89  NKTQFFSHSSTRTPPLFTANSTAQRSGTFVEHLTGITESEEGISEANGFGDVESARNDIR 148

Query: 131 HLGAPAL----EVKELDELPEQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAA 190
           ++    +    EV+EL+ELPE+WRRSKLAWLCKE+P HK  TL+RLLNAQ+KW++Q+DA 
Sbjct: 149 NVATRRIETEFEVRELEELPEEWRRSKLAWLCKEVPTHKAVTLVRLLNAQKKWVRQEDAT 208

Query: 191 YVIVHCLRIRENETAFRVYKWMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIIN 250
           Y+ VHC+RIRENET FRVY+WM QQ+WYRFD+ L TKLA+Y+GKERKF+KCREVFDD++N
Sbjct: 209 YISVHCMRIRENETGFRVYRWMTQQNWYRFDFGLTTKLAEYLGKERKFTKCREVFDDVLN 268

Query: 251 QGCVPSESTFHILIVAYLSA-PIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSK 310
           QG VPSESTFHIL+VAYLS+  ++GC+EEA ++YNRMIQLGGY+PRLSLHNSLF+AL+SK
Sbjct: 269 QGRVPSESTFHILVVAYLSSLSVEGCLEEACSVYNRMIQLGGYKPRLSLHNSLFRALVSK 328

Query: 311 PGDLSKHHLKQAEFIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAG 370
            G +    LKQAEFI+HN+VTTGLE+ KDIY+GLIWLHS QD VD  RI SLR+EM++AG
Sbjct: 329 QGGILNDQLKQAEFIFHNVVTTGLEVQKDIYSGLIWLHSCQDEVDIGRINSLREEMKKAG 388

Query: 371 IEEEREVLVSILRASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAF 430
            +E +EV+VS+LRA +K G V E ER+WL+L   D  +PSQAFVYK+E Y+KVG+  KA 
Sbjct: 389 FQESKEVVVSLLRAYAKEGGVEEVERTWLELLDLDCGIPSQAFVYKIEAYSKVGDFAKAM 448

Query: 431 EIFREMEQ-LNSVSAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMF 490
           EIFREME+ +   + + Y  II +LCKV++V L E++M+ F +S  KPL P+++++  M+
Sbjct: 449 EIFREMEKHIGGATMSGYHKIIEVLCKVQQVELVETLMKEFEESGKKPLLPSFIEIAKMY 508

Query: 491 FNLSLHDKLELTFSQCLEKCKPNRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSA 550
           F+L LH+KLE+ F QCLEKC+P++ IY+IYL+SL K+GNL++A ++F++M+ NG I VSA
Sbjct: 509 FDLGLHEKLEMAFVQCLEKCQPSQPIYNIYLDSLTKIGNLEKAGDVFNEMKNNGTINVSA 568

Query: 551 RSCNIILSGYLLSGDYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEIKK-PVSLK 610
           RSCN +L GYL  G  ++AE+IYDLM  KKY+I+PPLMEKLDY+LSL +KE+KK P S+K
Sbjct: 569 RSCNSLLKGYLDCGKQVQAERIYDLMRMKKYEIEPPLMEKLDYILSLKKKEVKKRPFSMK 628

Query: 611 LSKEQREILVGLLLGGLEIESDEGRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWLHPAS 670
           LSK+QRE+LVGLLLGGL+IESD+ +K+H I+FEF E+   H  L+++I++Q+ EWLHP S
Sbjct: 629 LSKDQREVLVGLLLGGLQIESDKEKKSHMIKFEFRENSQAHLVLKQNIHDQFREWLHPLS 688

Query: 671 KSSDSDTDIPYKFCTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRI 730
              +    IP++F +V HSYFGFYA+ +WP+G P IP LIHRWLSP  LAYWYMY G + 
Sbjct: 689 NFQED--IIPFEFYSVPHSYFGFYAEHYWPKGQPEIPKLIHRWLSPHSLAYWYMYSGVKT 748

Query: 731 SSGDFVLKLKGSREGVAKIVKSLGEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFIL 790
           SSGD +L+LKGS EGV K+VK+L  KSM C+VK+KG+V+WIGL G+N+  FWKLIEP +L
Sbjct: 749 SSGDIILRLKGSLEGVEKVVKALQAKSMECRVKKKGKVFWIGLQGTNSALFWKLIEPHVL 808

Query: 791 DDLKDRLQADSLNMEKAVN-ETYNINFDSQSDSDEE 810
           ++LK+ L+  S +++     E  +INF S SD  ++
Sbjct: 809 ENLKEHLKPASESLDNVKEAEEQSINFKSNSDHSDD 840

BLAST of Cp4.1LG02g11170 vs. Swiss-Prot
Match: OTP51_ORYSJ (Pentatricopeptide repeat-containing protein OTP51, chloroplastic OS=Oryza sativa subsp. japonica GN=OTP51 PE=3 SV=1)

HSP 1 Score: 802.4 bits (2071), Expect = 4.7e-231
Identity = 398/738 (53.93%), Postives = 542/738 (73.44%), Query Frame = 1

Query: 78  IPAFASSSSVEALVHDRDSPAESEEPLCSPYSTGAEGFASADLKH-LGAPALEVKELDEL 137
           IPA AS+  +E+L+ D D   E E+          E +A+AD +  + +P L V EL+EL
Sbjct: 53  IPAVASA--LESLILDLDDDEEDEDEETEFGLFQGEAWAAADEREAVRSPELVVPELEEL 112

Query: 138 PEQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYVIVHCLRIRENETAFRVY 197
           PEQWRRS++AWLCKELPA+K  T  R+LNAQRKW+ QDDA YV VHCLRIR N+ AFRVY
Sbjct: 113 PEQWRRSRIAWLCKELPAYKHSTFTRILNAQRKWITQDDATYVAVHCLRIRNNDAAFRVY 172

Query: 198 KWMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLS 257
            WM++QHW+RF++ALAT++AD +G++ K  KCREVF+ ++ QG VP+ESTFHILIVAYLS
Sbjct: 173 SWMVRQHWFRFNFALATRVADCLGRDGKVEKCREVFEAMVKQGRVPAESTFHILIVAYLS 232

Query: 258 APIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSKPGDLSKHHLKQAEFIYHNLV 317
            P   C+EEA  IYN+MIQ+GGY+PRLSLHNSLF+AL+SK G  +K++LKQAEF+YHN+V
Sbjct: 233 VPKGRCLEEACTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGTAKYNLKQAEFVYHNVV 292

Query: 318 TTGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGD 377
           TT L++HKD+YAGLIWLHSYQD +D+ERI++LRKEM+QAG +E  +VLVS++RA SK G+
Sbjct: 293 TTNLDVHKDVYAGLIWLHSYQDVIDRERIIALRKEMKQAGFDEGIDVLVSVMRAFSKEGN 352

Query: 378 VMEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREMEQLN-SVSAAAYQT 437
           V E E +W  +      +P QA+V +ME YA+ G PMK+ ++F+EM+  N   + A+Y  
Sbjct: 353 VAETEATWHNILQSGSDLPVQAYVCRMEAYARTGEPMKSLDMFKEMKDKNIPPNVASYHK 412

Query: 438 IIGILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKC 497
           II I+ K  EV + E +M  FI+S++K L PA++DLM M+ +L +H+KLELTF +C+ +C
Sbjct: 413 IIEIMTKALEVDIVEQLMNEFIESDMKHLMPAFLDLMYMYMDLDMHEKLELTFLKCIARC 472

Query: 498 KPNRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAE 557
           +PNR +Y+IYL SLVKVGN+++AEE+F +M  NG IG + +SCNI+L GYL + DY KAE
Sbjct: 473 RPNRILYTIYLESLVKVGNIEKAEEVFGEMHNNGMIGTNTKSCNIMLRGYLSAEDYQKAE 532

Query: 558 KIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEIK-KPVSLKLSKEQREILVGLLLGGLEIE 617
           K+YD+M +KKYD+    +EKL   L L++K IK K VS+KL +EQREIL+GLLLGG  +E
Sbjct: 533 KVYDMMSKKKYDVQADSLEKLQSGLLLNKKVIKPKTVSMKLDQEQREILIGLLLGGTRME 592

Query: 618 SDEGRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWLHPASKSSDSDTDIPYKFCTVSHSY 677
           S   R  H + F+F ED + HS LR HI+E++ EWL  AS+S D  + IPY+F T+ H +
Sbjct: 593 SYAQRGVHIVHFQFQEDSNAHSVLRVHIHERFFEWLSSASRSFDDGSKIPYQFSTIPHQH 652

Query: 678 FGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLK-GSREGVAKI 737
           F F+ DQF+ +G P +P LIHRWL+PRVLAYW+M+GG ++ SGD VLKL  G+ EGV +I
Sbjct: 653 FSFFVDQFFLKGQPVLPKLIHRWLTPRVLAYWFMFGGSKLPSGDIVLKLSGGNSEGVERI 712

Query: 738 VKSLGEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDRLQADSLNMEKAVN 797
           V SL  +S++ KVKRKGR +WIG  GSNA  FW++IEP +L++    +  +      ++ 
Sbjct: 713 VNSLHTQSLTSKVKRKGRFFWIGFQGSNAESFWRIIEPHVLNNFASLVTQEG----SSIG 772

Query: 798 ETYNINFDSQSDSDEEAS 812
                + D+ SD D + S
Sbjct: 773 SDGTQDTDTDSDDDMQMS 784

BLAST of Cp4.1LG02g11170 vs. Swiss-Prot
Match: PPR26_ARATH (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 6.1e-13
Identity = 71/284 (25.00%), Postives = 127/284 (44.72%), Query Frame = 1

Query: 190 ETAFRVYKWMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHI 249
           +  FR+ K  M++   R D    + L + + KE K      +FD++  +G +P++  F  
Sbjct: 292 DEGFRL-KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 351

Query: 250 LIVAYLSAPIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSKPGDLSKHHLKQAE 309
           LI  +      G I+     Y +M+  G  +P + L+N+L      K GDL       A 
Sbjct: 352 LIHGHSR---NGEIDLMKESYQKMLSKG-LQPDIVLYNTLVNGFC-KNGDLVA-----AR 411

Query: 310 FIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVSILR 369
            I   ++  GL   K  Y  LI    +    D E  + +RKEM Q GIE +R    +++ 
Sbjct: 412 NIVDGMIRRGLRPDKITYTTLI--DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 471

Query: 370 ASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREMEQLNSV- 429
              K G V++AER+  ++           +   M+ + K G+    F++ +EM+    V 
Sbjct: 472 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 531

Query: 430 SAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLM 473
           S   Y  ++  LCK+ ++  A+ +++  +   + P    Y  L+
Sbjct: 532 SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562

BLAST of Cp4.1LG02g11170 vs. Swiss-Prot
Match: PP158_ARATH (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.2e-12
Identity = 78/334 (23.35%), Postives = 153/334 (45.81%), Query Frame = 1

Query: 229 REVFDDIINQGCVPSESTFHILIVAYLSAPIQGCIEEASAIYNRMIQLGGYEPRLSLHNS 288
           RE+FD++  +GC P+E TF IL+  Y  A   G  ++   + N M +  G  P   ++N+
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKA---GLTDKGLELLNAM-ESFGVLPNKVIYNT 226

Query: 289 LFKALL--SKPGDLSKHHLKQAEFIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIM 348
           +  +     +  D  K   K  E     LV   +  +  I A    L      +D  RI 
Sbjct: 227 IVSSFCREGRNDDSEKMVEKMRE---EGLVPDIVTFNSRISA----LCKEGKVLDASRIF 286

Query: 349 SLRKEMQQAGIEEEREVLVSI-LRASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEV 408
           S  +  +  G+     +  ++ L+   K+G + +A+  +  ++  D     Q++   ++ 
Sbjct: 287 SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQG 346

Query: 409 YAKVGNPMKAFEIFREMEQLN-SVSAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPL 468
             + G  ++A  + ++M       S  +Y  ++  LCK+  ++ A++++    ++ + P 
Sbjct: 347 LVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPD 406

Query: 469 KPAYVDLMNMFFNLSLHDKLELTFSQCL-EKCKPNRTIYSIYLNSLVKVGNLDRAEEIFS 528
              Y  L++ + ++   D  +    + +   C PN    +I L+SL K+G +  AEE+  
Sbjct: 407 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 466

Query: 529 QMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKI 558
           +M   G  G+   +CNII+ G   SG+  KA +I
Sbjct: 467 KMNEKG-YGLDTVTCNIIVDGLCGSGELDKAIEI 488

BLAST of Cp4.1LG02g11170 vs. Swiss-Prot
Match: PPR76_ARATH (Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 8.8e-12
Identity = 91/373 (24.40%), Postives = 165/373 (44.24%), Query Frame = 1

Query: 164 LNAQRKW-MKQDDAAY--VIVHCLRIRENETAFRVYKWMMQQHWYRFDYALATKLADYMG 223
           L   +KW +K +   Y  ++   LR R+   AF VY   +++  ++ D      L D + 
Sbjct: 191 LRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVY-CEIRRGGHKLDIFAYNMLLDALA 250

Query: 224 KERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPIQGCIEEASAIYNRMIQLGGYE 283
           K+ K     +VF+D+  + C   E T+ I+I         G  +EA  ++N MI   G  
Sbjct: 251 KDEKAC---QVFEDMKKRHCRRDEYTYTIMIRTMGRI---GKCDEAVGLFNEMIT-EGLT 310

Query: 284 PRLSLHNSLFKALLSKPGDLSKHHLKQAEFIYHNLVTTGLELHKDIYAGLI-WLHSYQDT 343
             +  +N+L + L    G +    + +A  ++  +V TG   ++  Y+ L+  L +    
Sbjct: 311 LNVVGYNTLMQVLAK--GKM----VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL 370

Query: 344 VDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGDVMEAERSWLKLKSFDGSMPSQAF 403
           V  + ++ + K     GI         ++R  SKLG V EA R +  + SF       ++
Sbjct: 371 VRLDGVVEISKRYMTQGIYSY------LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSY 430

Query: 404 VYKMEVYAKVGNPMKAFEIFREMEQLNSVS-AAAYQTIIGILCKVEEVTLAESVMEGFIK 463
           +  +E     G  ++A E+  ++ +   V+    Y T+   L K+++++    + E   K
Sbjct: 431 MSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKK 490

Query: 464 SNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEK--CKPNRTIYSIYLNSLVKVGNLD 523
               P    Y  L+  F  +   D+    F + LE+  CKP+   Y+  +N L K G++D
Sbjct: 491 DGPSPDIFTYNILIASFGRVGEVDEAINIFEE-LERSDCKPDIISYNSLINCLGKNGDVD 542

Query: 524 RAEEIFSQMQTNG 530
            A   F +MQ  G
Sbjct: 551 EAHVRFKEMQEKG 542

BLAST of Cp4.1LG02g11170 vs. TrEMBL
Match: A0A0A0LBL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G625100 PE=4 SV=1)

HSP 1 Score: 1315.1 bits (3402), Expect = 0.0e+00
Identity = 651/795 (81.89%), Postives = 714/795 (89.81%), Query Frame = 1

Query: 24  SMSIRTSAFATVTLLRSLTLSFPLCHHHFRCRNYVIRSLSIPTYSAKGRRQLTRIPAFAS 83
           SMSI TSAF+TVT LRSLTLS    HH+F C N++I +L +P YS K RRQL RI AFAS
Sbjct: 4   SMSIPTSAFSTVTRLRSLTLSLSPYHHYFHCPNHIIPTLFLPAYSVKVRRQLPRIRAFAS 63

Query: 84  SSSVEALVHDRDSPAESEEPLCSPYSTGAE------GFASADLKHLGAPALEVKELDELP 143
            S V+ LV+D DSP+ESEE L S +S G +      GFAS DLKHLG P LEVKELDELP
Sbjct: 64  GSFVKQLVYDHDSPSESEEHLSSSFSNGGDGFHFENGFASVDLKHLGTPVLEVKELDELP 123

Query: 144 EQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYVIVHCLRIRENETAFRVYK 203
           EQWRRSK+AWLCKELPA KPGT+IRLLNAQ+KWM QDDA Y+IVHCLRIRENETAFRVYK
Sbjct: 124 EQWRRSKVAWLCKELPAQKPGTVIRLLNAQKKWMGQDDATYLIVHCLRIRENETAFRVYK 183

Query: 204 WMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSA 263
           WMMQQHWYRFDYAL+TKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSA
Sbjct: 184 WMMQQHWYRFDYALSTKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSA 243

Query: 264 PIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSKPGDLSKHHLKQAEFIYHNLVT 323
           P+QGCIEEAS IYNRMIQLGGY+PRLSLH+SLF+AL+SKPGDLSKHHLKQAEFIYHNLVT
Sbjct: 244 PVQGCIEEASTIYNRMIQLGGYQPRLSLHSSLFRALVSKPGDLSKHHLKQAEFIYHNLVT 303

Query: 324 TGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGDV 383
           +GLELHKD+Y GLIWLHSYQDT+D+ERI+SLRKEMQQAGI+EEREVL+SILRASSK+GDV
Sbjct: 304 SGLELHKDMYGGLIWLHSYQDTIDRERIVSLRKEMQQAGIKEEREVLLSILRASSKMGDV 363

Query: 384 MEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREMEQLNSVSAAAYQTII 443
           MEAE+ W +LK  DG+MPSQAFVYKMEVYAK+G PMKA EIFREMEQLNS +AAAYQTII
Sbjct: 364 MEAEKLWQELKYLDGNMPSQAFVYKMEVYAKMGKPMKALEIFREMEQLNSTNAAAYQTII 423

Query: 444 GILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKP 503
           GILCK + + LAES+M GFI+SNLKPL PAYVDLMNMFFNL+L DKLELTFSQCLEKCKP
Sbjct: 424 GILCKFQVIELAESIMAGFIESNLKPLTPAYVDLMNMFFNLNLDDKLELTFSQCLEKCKP 483

Query: 504 NRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKI 563
           NRTIYSIYL+SLVKVGNLDRAEEIFSQM+TNGEIG++ARSCNIIL GYLL G+Y+KAEKI
Sbjct: 484 NRTIYSIYLDSLVKVGNLDRAEEIFSQMETNGEIGINARSCNIILRGYLLCGNYMKAEKI 543

Query: 564 YDLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVGLLLGGLEIESDE 623
           YDLMCQK+YDIDPPLMEKL+Y+LSLSRKE+KKP+SLKLSKEQREILVGLLLGGLEIESD+
Sbjct: 544 YDLMCQKRYDIDPPLMEKLEYILSLSRKEVKKPMSLKLSKEQREILVGLLLGGLEIESDD 603

Query: 624 GRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWLHPASKSSDSDTDIPYKFCTVSHSYFGF 683
            RKNHRIQFEFH +  THS LRRHIYEQYH+WLH ASK +D D DIPYKFCTVSHSYFGF
Sbjct: 604 ERKNHRIQFEFHRNCKTHSVLRRHIYEQYHKWLHSASKLTDGDVDIPYKFCTVSHSYFGF 663

Query: 684 YADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKGSREGVAKIVKSL 743
           YADQFWPRG  AIPNLIHRWLSPRVLAYWYMYGGCR SSGD +LKLKGS EGV KIVKSL
Sbjct: 664 YADQFWPRGRRAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVKSL 723

Query: 744 GEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDRLQADSLNMEKAVNETYN 803
            EKS+ CKVKRKG +YWIGLLGSNATWFWKLIEPFILD LK+  QADSLN+   +N + N
Sbjct: 724 REKSIHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKESTQADSLNLVGVLNGSEN 783

Query: 804 INFDSQSDSDEEASS 813
           INFDS+SDS EE S+
Sbjct: 784 INFDSESDSVEETSN 798

BLAST of Cp4.1LG02g11170 vs. TrEMBL
Match: D7TPM6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00900 PE=4 SV=1)

HSP 1 Score: 1071.2 bits (2769), Expect = 6.2e-310
Identity = 542/806 (67.25%), Postives = 637/806 (79.03%), Query Frame = 1

Query: 27  IRTSAFATVTLLRSLTLSFPLCHHHFRCRNYVIRSLSIPTYSAK----------GRRQLT 86
           +RT   ++++LLRSL+   P  HH F C      SLS+  YS                L 
Sbjct: 1   MRTPVLSSLSLLRSLS---PSLHHRFLC------SLSLSNYSKSFFFPLPTTNIRHSSLF 60

Query: 87  RIPAFAS--SSSVEALVHDRDSPAESEEPLCSPYSTGAEG--------FASADLKHLGAP 146
           R P  A   SS VE +V       ESE      +S G EG        F S DL+HL +P
Sbjct: 61  RRPPLAKPLSSFVEQVV------GESERDENEGFSRGGEGESFDFGVAFGSTDLRHLSSP 120

Query: 147 ALEVKELDELPEQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYVIVHCLRI 206
           +LEVKEL+ELPEQWRRSKLAWLCKELPAHKP TLIR+LNAQ+KW++Q+DA Y+ VHC+RI
Sbjct: 121 SLEVKELEELPEQWRRSKLAWLCKELPAHKPATLIRILNAQKKWVRQEDATYIAVHCMRI 180

Query: 207 RENETAFRVYKWMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSEST 266
           RENET FRVYKWMMQQHW++FD+ALATKLADYMGKERKFSKCRE+FDDII QG VP EST
Sbjct: 181 RENETGFRVYKWMMQQHWFQFDFALATKLADYMGKERKFSKCREIFDDIIKQGLVPCEST 240

Query: 267 FHILIVAYLSAPIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSKPGDLSKHHLK 326
           FHILI+AYLSA +QGC++EA  IYNRMIQLGGY+PRLSLHNSLF+AL+ +PG  SK+ LK
Sbjct: 241 FHILIIAYLSASVQGCLDEACGIYNRMIQLGGYQPRLSLHNSLFRALVGQPGGSSKYFLK 300

Query: 327 QAEFIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVS 386
           QAEFI+HNLVT G E+HKD+Y GLIWLHSYQDT+D+ERI SLR+EMQ AGIEE R+VL+S
Sbjct: 301 QAEFIFHNLVTFGFEIHKDVYGGLIWLHSYQDTIDRERIASLREEMQLAGIEESRDVLLS 360

Query: 387 ILRASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREM-EQL 446
           ILRA SK GDV EAE++WLKL   D ++PSQ FVY+MEVYAKVG PMK+ EIFREM EQL
Sbjct: 361 ILRACSKEGDVEEAEKTWLKLLHSDCAIPSQGFVYRMEVYAKVGEPMKSLEIFREMQEQL 420

Query: 447 NSVSAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLE 506
            S S  AY  II +L K +E+ L ES+M  FI S +KPL P+Y+DLMNM+FNLSLHDKLE
Sbjct: 421 GSTSVVAYHKIIEVLSKAQEIELVESLMTEFINSGMKPLMPSYIDLMNMYFNLSLHDKLE 480

Query: 507 LTFSQCLEKCKPNRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGY 566
             F +CLEKC+PNR IY+IY++SLV++GNLD+AEEIF+QM +NG IGV+ +SCN ILSGY
Sbjct: 481 AAFYECLEKCRPNRAIYNIYMDSLVQIGNLDKAEEIFNQMYSNGAIGVNTKSCNTILSGY 540

Query: 567 LLSGDYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVG 626
           L  GDYLKAEKIYDLMCQKKY ID PLMEKLDYVLSLSRK +K+PVSLKLSKEQREIL+G
Sbjct: 541 LSCGDYLKAEKIYDLMCQKKYAIDAPLMEKLDYVLSLSRKVVKRPVSLKLSKEQREILIG 600

Query: 627 LLLGGLEIESDEGRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWLHPASKSSDSDTDIPY 686
           LLLGGL++ESDE RKNH I FEF+E+   HS LRRHI+EQYHEWL+ +SK SD + D+PY
Sbjct: 601 LLLGGLQMESDEERKNHVIYFEFNENSGAHSVLRRHIHEQYHEWLNSSSKLSDDNDDVPY 660

Query: 687 KFCTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKG 746
           KF T+SHSYFGFYADQFWPRG P IP LIHRWLSPRVLAYWYMYGG R SSGD +LKLKG
Sbjct: 661 KFSTISHSYFGFYADQFWPRGRPMIPKLIHRWLSPRVLAYWYMYGGHRTSSGDILLKLKG 720

Query: 747 SREGVAKIVKSLGEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDRLQADS 806
           SREGV K+V++L  +SM C+VKRKG V+WIGLLGSN+TWFWKLIEP+ILDD+KD ++A  
Sbjct: 721 SREGVEKVVRTLKAQSMDCRVKRKGTVFWIGLLGSNSTWFWKLIEPYILDDVKDFVKAGC 780

Query: 807 LNMEKAVNETYNINFDSQSDSDEEAS 812
            N          I+F S SD+DE A+
Sbjct: 781 QN---------TISFGSGSDTDENAA 782

BLAST of Cp4.1LG02g11170 vs. TrEMBL
Match: A0A061DZL4_THECC (Pentatricopeptide repeat-containing protein isoform 1 OS=Theobroma cacao GN=TCM_006996 PE=4 SV=1)

HSP 1 Score: 1048.9 bits (2711), Expect = 3.2e-303
Identity = 536/810 (66.17%), Postives = 648/810 (80.00%), Query Frame = 1

Query: 10  VSSSTVLLNSPSSSSMSIRTSAFATVTLLRSLTLSFPLCHHHFRCRNYVIRSLSIPTYSA 69
           V++S   LN P+     +RT+ F++++ LR   L  PL H        ++    IP  + 
Sbjct: 16  VTTSFPSLN-PTPCKTLMRTNPFSSLSFLR---LFRPLSH-----TKVLVFRPRIPHPTP 75

Query: 70  KGRRQLTRIPAFASSSSVEALVH-----DRDSPAESEEPLCSPYSTGAEG--FASADLKH 129
           +     +R   F+SSS   A V      + +   +S       ++   +G  FA  D+KH
Sbjct: 76  QLPPSFSRHRFFSSSSFSAAPVSFIAEKEGEEKWDSSNTENEAFAFEDDGGVFAGNDMKH 135

Query: 130 LGAPALEVKELDELPEQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYVIVH 189
           L AP +EVKEL+ELPE WRRSKLAWLCKELPAHK GTL+R+LNAQ+KWM+Q+DA Y+ VH
Sbjct: 136 LVAPEMEVKELEELPEHWRRSKLAWLCKELPAHKAGTLVRILNAQKKWMRQEDATYLAVH 195

Query: 190 CLRIRENETAFRVYKWMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVP 249
            +RIRENET FRVYKWMMQQHWYRFD+ALATKLADY GKERKF+KCRE+FDDIINQG VP
Sbjct: 196 SIRIRENETGFRVYKWMMQQHWYRFDFALATKLADYTGKERKFAKCREIFDDIINQGRVP 255

Query: 250 SESTFHILIVAYLSAPIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSKPGDLSK 309
           SESTFHILIVAYLS+P+ GC++EA +IYNRMIQLGGY+PRLSLHNSLF+ALLSKPG  SK
Sbjct: 256 SESTFHILIVAYLSSPVHGCLDEACSIYNRMIQLGGYQPRLSLHNSLFRALLSKPGGSSK 315

Query: 310 HHLKQAEFIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEERE 369
           ++LKQAEFI+HNL T GLE+ KDIY GLIWLHSYQDTVDKERI SLRK MQ+AG+EE RE
Sbjct: 316 YYLKQAEFIFHNLETCGLEVQKDIYGGLIWLHSYQDTVDKERIKSLRKMMQEAGMEEGRE 375

Query: 370 VLVSILRASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREM 429
           VLVSILRA SK GDV EAER+WLKL   +G++PSQAFVYKMEVYAKVG  MK+ E+FR+M
Sbjct: 376 VLVSILRACSKEGDVEEAERTWLKLLDSNGNIPSQAFVYKMEVYAKVGEIMKSLEVFRQM 435

Query: 430 EQ-LNSVSAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLH 489
           ++ L S S AAY  II +LCK +++ LAES+M+ F++S  KPL P+Y++L +M+ N+SLH
Sbjct: 436 QKYLGSASVAAYHKIIEVLCKSQQMDLAESLMKEFMESGKKPLMPSYIELTDMYLNMSLH 495

Query: 490 DKLELTFSQCLEKCKPNRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNII 549
           DKLE TF +CLEKC+PNRTIY+IYLNSLVKVGNL++A EIF QM  N  IGV+ARSCN I
Sbjct: 496 DKLESTFLECLEKCRPNRTIYNIYLNSLVKVGNLEKAGEIFGQMHGNSTIGVNARSCNTI 555

Query: 550 LSGYLLSGDYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQRE 609
           L GYL SGD+LKAEKIYDLMCQKKY+I+  L+EKLDYVLSLSRKE+KKPVSLKLSKEQR+
Sbjct: 556 LGGYLSSGDFLKAEKIYDLMCQKKYEIESLLIEKLDYVLSLSRKEVKKPVSLKLSKEQRQ 615

Query: 610 ILVGLLLGGLEIESDEGRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWLHPASKSSDSDT 669
           ILVGLLLGGL+I+SD  RKNH I+FEF+++  THS L+RHI++QYHEWLHP+SK +D + 
Sbjct: 616 ILVGLLLGGLKIDSDGERKNHMIRFEFNQNSVTHSILKRHIHDQYHEWLHPSSKPTDGND 675

Query: 670 DIPYKFCTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVL 729
           DIP+KF T+SHSYFGFYADQFWPRG P IP LIHRWLSP VLAYWYMYGG + S GD +L
Sbjct: 676 DIPHKFSTISHSYFGFYADQFWPRGQPVIPKLIHRWLSPLVLAYWYMYGGYKTSYGDILL 735

Query: 730 KLKGSREGVAKIVKSLGEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDRL 789
           KLKGSREGV K+VK+L  K++ C+VKRKG+VYWIG LGSN+ WFWKL+EP+ILDDLKD L
Sbjct: 736 KLKGSREGVEKVVKTLKAKTLHCRVKRKGKVYWIGFLGSNSMWFWKLVEPYILDDLKDFL 795

Query: 790 QADSLNMEKAVNETYNINFDSQSDSDEEAS 812
           +  S   +    E+ +INFDS SDSDE+AS
Sbjct: 796 KIGSDTTDGYAVESQDINFDSASDSDEKAS 816

BLAST of Cp4.1LG02g11170 vs. TrEMBL
Match: B9S769_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0774040 PE=4 SV=1)

HSP 1 Score: 1048.1 bits (2709), Expect = 5.5e-303
Identity = 522/814 (64.13%), Postives = 643/814 (78.99%), Query Frame = 1

Query: 4   VNPKPKVSSSTVLLNSPSSSSMSIRTSAFATVTLLRSLTLSFPLCHHHFRCRNYVIRSLS 63
           +NP P  +S+   L  P  +S+     +F++++LLRSLTLS    HH ++ R + +R+L 
Sbjct: 25  LNPTPNFNSNKTTLTPPMRTSLL----SFSSISLLRSLTLSLSRHHHCYQHRPF-LRTLH 84

Query: 64  IPTYSAKGRRQLTRIPAFASSSSVEALVHDRDSPAESEEPL-CSPYSTG--------AEG 123
           I     K       + +F  ++S E L  +  SP+++EE    S Y+           + 
Sbjct: 85  ISPNKHKKTSSFCTLSSF--NTSAEQLACESLSPSKNEEKWDISSYNDNEHEIFKFDGDS 144

Query: 124 FASADLKHLGAPALEVKELDELPEQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQD 183
            A  DLKHL  PALEVKEL ELPEQWRR++LAWLCK+LPAHK GTL+++LNAQ+KWM+Q+
Sbjct: 145 GAGVDLKHLDTPALEVKELQELPEQWRRARLAWLCKQLPAHKAGTLVKILNAQKKWMRQE 204

Query: 184 DAAYVIVHCLRIRENETAFRVYKWMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDD 243
           DA Y+ VHC+RIRENE  FRVYKWMMQQHWYRFD+ LATKLADYMGKERKF+KCRE+FDD
Sbjct: 205 DATYIAVHCMRIRENEAGFRVYKWMMQQHWYRFDFGLATKLADYMGKERKFAKCREIFDD 264

Query: 244 IINQGCVPSESTFHILIVAYLSAPIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALL 303
           IINQG VPSESTFHILI+AYLSAP+QGC+EEA  IYNRMIQLGGY+PRLSLHNSLF+AL+
Sbjct: 265 IINQGRVPSESTFHILIIAYLSAPVQGCLEEACTIYNRMIQLGGYQPRLSLHNSLFRALV 324

Query: 304 SKPGDLSKHHLKQAEFIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQ 363
           SKPG  +KH+LKQAEFIYHNLVT+GLE+  DIY GLIWLHSYQD +DK RI S+R+EM+Q
Sbjct: 325 SKPGGFAKHYLKQAEFIYHNLVTSGLEIQNDIYGGLIWLHSYQDNIDKVRIASIREEMKQ 384

Query: 364 AGIEEEREVLVSILRASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMK 423
           AGI E RE+L+SI+RA SK GDV EAER+WLKL   DG +P+QAFVY+MEV+AK+G  MK
Sbjct: 385 AGIMEGREILLSIMRACSKEGDVEEAERTWLKLLQVDGGLPTQAFVYRMEVFAKLGEHMK 444

Query: 424 AFEIFREMEQL-NSVSAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLMN 483
           + E FREM++L  S S AAY  II ++ + +EV LAES+M+ FIKS LKPL P++ DLMN
Sbjct: 445 SLETFREMQELLGSSSIAAYHKIIEVVSQAQEVELAESLMQEFIKSGLKPLMPSFTDLMN 504

Query: 484 MFFNLSLHDKLELTFSQCLEKCKPNRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGV 543
           M+ NL+LH+KLE TF  CLE C+PNR IY++YL+SLVKVGNLD+AEE F+ M +N  +GV
Sbjct: 505 MYLNLNLHEKLESTFFACLENCRPNRNIYNVYLDSLVKVGNLDKAEEAFNNMCSNEAVGV 564

Query: 544 SARSCNIILSGYLLSGDYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSL 603
           + RSCN IL GYL SGDY+KAEKIYDLMCQKKYDI+P LMEKLDYVLSLSRK +KKP+SL
Sbjct: 565 NIRSCNTILRGYLSSGDYVKAEKIYDLMCQKKYDIEPSLMEKLDYVLSLSRKVVKKPLSL 624

Query: 604 KLSKEQREILVGLLLGGLEIESDEGRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWLHPA 663
           KLSK+QREILVGLLLGGL +ESD+ RK H I+FEF+E+ STH+ LRRH+Y++YHEWLHP+
Sbjct: 625 KLSKDQREILVGLLLGGLRVESDDNRKKHMIRFEFNENSSTHAILRRHLYDKYHEWLHPS 684

Query: 664 SKSSDSDTDIPYKFCTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCR 723
            K SD      Y+F T+SHSYF FYA+QFWP+G P IP LIHRWLSP+VLA+WYMY G R
Sbjct: 685 CKLSDGSDGASYRFSTISHSYFSFYAEQFWPKGQPMIPKLIHRWLSPQVLAFWYMYAGHR 744

Query: 724 ISSGDFVLKLKGSREGVAKIVKSLGEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFI 783
            SSGD +LKLKGSREGV K+ K+L  KS++CKVKRKGRV+WIG LG+++ WFWKL+EP+I
Sbjct: 745 TSSGDILLKLKGSREGVEKVFKTLKSKSLNCKVKRKGRVFWIGFLGNDSVWFWKLVEPYI 804

Query: 784 LDDLKDRLQADSLNMEKAVNETYNINFDSQSDSD 808
           LDDLK  L+A    +E +     NINFDS SDS+
Sbjct: 805 LDDLKLFLKAGDQTLEYSAE---NINFDSGSDSE 828

BLAST of Cp4.1LG02g11170 vs. TrEMBL
Match: A0A067KPY6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04884 PE=4 SV=1)

HSP 1 Score: 1040.8 bits (2690), Expect = 8.7e-301
Identity = 520/821 (63.34%), Postives = 647/821 (78.81%), Query Frame = 1

Query: 4   VNPKPKVSSSTVLLNSPSSSSMSIRTSAFATVTLLRSLTLS---FPLCHHHFRCRNYVIR 63
           +NPKP   ++T+LL         +RTS F++++LLRS TLS     L HHH+  + + + 
Sbjct: 26  LNPKP---NTTLLL--------PMRTSLFSSLSLLRSFTLSCSHHQLHHHHYIRQRFFLG 85

Query: 64  SLSIPTYSAKGRRQLTRIPAFASSSS-VEALVHDRD--------SPAESEEPLCSPYSTG 123
           SL   T   +    L  +  F++S+  +E   H           S  E+E  +       
Sbjct: 86  SLPTSTLFRRNFCPLRSLKCFSTSTEQLECEYHSLPESEGKWDLSSNENESDVFKYEGDL 145

Query: 124 AEGFASADLKHLGAPALEVKELDELPEQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWM 183
               A  DLKH+ +PALEVKEL+ELPEQWRR++LAWLCK+LPAHK GTL+R+LNAQ+KWM
Sbjct: 146 GHSGAGWDLKHIDSPALEVKELEELPEQWRRARLAWLCKQLPAHKAGTLVRILNAQKKWM 205

Query: 184 KQDDAAYVIVHCLRIRENETAFRVYKWMMQQHWYRFDYALATKLADYMGKERKFSKCREV 243
           +Q+DA Y+ VHC+RIRENET FRVYKWMMQQHWYRFD+AL+TKLADYMGKE KF+KCRE+
Sbjct: 206 RQEDATYIAVHCMRIRENETGFRVYKWMMQQHWYRFDFALSTKLADYMGKEGKFAKCREL 265

Query: 244 FDDIINQGCVPSESTFHILIVAYLSAPIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFK 303
           FDDIINQG VPSESTFHIL++AYLSAP+QGC++EA +IYNRMIQLGGY+PRLSLHNSLF+
Sbjct: 266 FDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFR 325

Query: 304 ALLSKPGDLSKHHLKQAEFIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKE 363
           AL++KP D SK +LKQAEFI+HNLVT+GLE+ K IY GLIWLHSYQD +D+ RI SLR+E
Sbjct: 326 ALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREE 385

Query: 364 MQQAGIEEEREVLVSILRASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGN 423
           M+ AGIEE R+VL+SILRA SK GDV EAE +WLKL   DG  P+QAFVY+MEV+AKVG 
Sbjct: 386 MKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGE 445

Query: 424 PMKAFEIFREM-EQLNSVSAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPLKPAYVD 483
            MK+ EIFREM E+L SVS   Y  II +LC+ +E+ L+ES+M+ FI+S +KPL P++ +
Sbjct: 446 HMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSE 505

Query: 484 LMNMFFNLSLHDKLELTFSQCLEKCKPNRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGE 543
           LMN++ NL+LHDKLE  FS CL+KC+PNRTIY++YL+SLVKVGNLD+AEEIF+ + +   
Sbjct: 506 LMNLYLNLNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEG 565

Query: 544 IGVSARSCNIILSGYLLSGDYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKP 603
           +GV+ RSCNIILS YL SG+++KAE +Y+LMCQKKYDI+P LM+KLDYVLSLSRKE+KKP
Sbjct: 566 VGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKKYDIEPSLMQKLDYVLSLSRKEVKKP 625

Query: 604 VSLKLSKEQREILVGLLLGGLEIESDEGRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWL 663
           VSLK+SK QREILVGLLLGGL+IESDE RK H I+FEF+E+ S HS LRRH+Y++YHEWL
Sbjct: 626 VSLKMSKNQREILVGLLLGGLQIESDEERKRHMIRFEFNENSSVHSVLRRHLYDEYHEWL 685

Query: 664 HPASKSSDSDTDIPYKFCTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYG 723
           HP+ K +D   DI Y+F T+SHSYFGFYADQFWP+G   IP LIHRWLSP+VLAYWYMYG
Sbjct: 686 HPSCKLNDGSDDISYRFSTISHSYFGFYADQFWPKGRAIIPKLIHRWLSPQVLAYWYMYG 745

Query: 724 GCRISSGDFVLKLKGSREGVAKIVKSLGEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIE 783
           G R SSGD +LKLKGSREGVAK+VK+   KS+SC+VK KGRV+WIG LGS++ WFWKL+E
Sbjct: 746 GHRTSSGDILLKLKGSREGVAKVVKAFKAKSLSCRVKVKGRVFWIGFLGSDSIWFWKLVE 805

Query: 784 PFILDDLKDRLQADSLNMEKAVNETYNINFDSQSDSDEEAS 812
           P+I+DDLKD L+      +    ET +INFDS+SD D   S
Sbjct: 806 PYIIDDLKDYLRVGDQMSDNNAVETQHINFDSESDIDAAES 835

BLAST of Cp4.1LG02g11170 vs. TAIR10
Match: AT2G15820.1 (AT2G15820.1 endonucleases)

HSP 1 Score: 886.7 bits (2290), Expect = 1.1e-257
Identity = 452/816 (55.39%), Postives = 606/816 (74.26%), Query Frame = 1

Query: 11  SSSTVLLNSPSSSSMSIRTSAF-ATVTLLRSLTLSFPLCHHHFRCRNYVIRSLSIPTYSA 70
           SSSTV + + + SS+S   +   ++ TL RSL  SF L  H        +R LSI T   
Sbjct: 29  SSSTVSVTTFNISSLSSNPNIINSSSTLFRSL--SFSLIRHRSSYSRRSLRRLSIHTVHG 88

Query: 71  KGRRQLTRI-----PAFASSSSVE---ALVHDRDSPAESEEPLCSPYSTGAEGFASADLK 130
              +  +       P F ++S+ +     V       ESEE +      G    A  D++
Sbjct: 89  NKTQFFSHSSTRTPPLFTANSTAQRSGTFVEHLTGITESEEGISEANGFGDVESARNDIR 148

Query: 131 HLGAPAL----EVKELDELPEQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAA 190
           ++    +    EV+EL+ELPE+WRRSKLAWLCKE+P HK  TL+RLLNAQ+KW++Q+DA 
Sbjct: 149 NVATRRIETEFEVRELEELPEEWRRSKLAWLCKEVPTHKAVTLVRLLNAQKKWVRQEDAT 208

Query: 191 YVIVHCLRIRENETAFRVYKWMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIIN 250
           Y+ VHC+RIRENET FRVY+WM QQ+WYRFD+ L TKLA+Y+GKERKF+KCREVFDD++N
Sbjct: 209 YISVHCMRIRENETGFRVYRWMTQQNWYRFDFGLTTKLAEYLGKERKFTKCREVFDDVLN 268

Query: 251 QGCVPSESTFHILIVAYLSA-PIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSK 310
           QG VPSESTFHIL+VAYLS+  ++GC+EEA ++YNRMIQLGGY+PRLSLHNSLF+AL+SK
Sbjct: 269 QGRVPSESTFHILVVAYLSSLSVEGCLEEACSVYNRMIQLGGYKPRLSLHNSLFRALVSK 328

Query: 311 PGDLSKHHLKQAEFIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAG 370
            G +    LKQAEFI+HN+VTTGLE+ KDIY+GLIWLHS QD VD  RI SLR+EM++AG
Sbjct: 329 QGGILNDQLKQAEFIFHNVVTTGLEVQKDIYSGLIWLHSCQDEVDIGRINSLREEMKKAG 388

Query: 371 IEEEREVLVSILRASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAF 430
            +E +EV+VS+LRA +K G V E ER+WL+L   D  +PSQAFVYK+E Y+KVG+  KA 
Sbjct: 389 FQESKEVVVSLLRAYAKEGGVEEVERTWLELLDLDCGIPSQAFVYKIEAYSKVGDFAKAM 448

Query: 431 EIFREMEQ-LNSVSAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMF 490
           EIFREME+ +   + + Y  II +LCKV++V L E++M+ F +S  KPL P+++++  M+
Sbjct: 449 EIFREMEKHIGGATMSGYHKIIEVLCKVQQVELVETLMKEFEESGKKPLLPSFIEIAKMY 508

Query: 491 FNLSLHDKLELTFSQCLEKCKPNRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSA 550
           F+L LH+KLE+ F QCLEKC+P++ IY+IYL+SL K+GNL++A ++F++M+ NG I VSA
Sbjct: 509 FDLGLHEKLEMAFVQCLEKCQPSQPIYNIYLDSLTKIGNLEKAGDVFNEMKNNGTINVSA 568

Query: 551 RSCNIILSGYLLSGDYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEIKK-PVSLK 610
           RSCN +L GYL  G  ++AE+IYDLM  KKY+I+PPLMEKLDY+LSL +KE+KK P S+K
Sbjct: 569 RSCNSLLKGYLDCGKQVQAERIYDLMRMKKYEIEPPLMEKLDYILSLKKKEVKKRPFSMK 628

Query: 611 LSKEQREILVGLLLGGLEIESDEGRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWLHPAS 670
           LSK+QRE+LVGLLLGGL+IESD+ +K+H I+FEF E+   H  L+++I++Q+ EWLHP S
Sbjct: 629 LSKDQREVLVGLLLGGLQIESDKEKKSHMIKFEFRENSQAHLVLKQNIHDQFREWLHPLS 688

Query: 671 KSSDSDTDIPYKFCTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRI 730
              +    IP++F +V HSYFGFYA+ +WP+G P IP LIHRWLSP  LAYWYMY G + 
Sbjct: 689 NFQED--IIPFEFYSVPHSYFGFYAEHYWPKGQPEIPKLIHRWLSPHSLAYWYMYSGVKT 748

Query: 731 SSGDFVLKLKGSREGVAKIVKSLGEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFIL 790
           SSGD +L+LKGS EGV K+VK+L  KSM C+VK+KG+V+WIGL G+N+  FWKLIEP +L
Sbjct: 749 SSGDIILRLKGSLEGVEKVVKALQAKSMECRVKKKGKVFWIGLQGTNSALFWKLIEPHVL 808

Query: 791 DDLKDRLQADSLNMEKAVN-ETYNINFDSQSDSDEE 810
           ++LK+ L+  S +++     E  +INF S SD  ++
Sbjct: 809 ENLKEHLKPASESLDNVKEAEEQSINFKSNSDHSDD 840

BLAST of Cp4.1LG02g11170 vs. TAIR10
Match: AT1G09680.1 (AT1G09680.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 3.4e-14
Identity = 71/284 (25.00%), Postives = 127/284 (44.72%), Query Frame = 1

Query: 190 ETAFRVYKWMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHI 249
           +  FR+ K  M++   R D    + L + + KE K      +FD++  +G +P++  F  
Sbjct: 292 DEGFRL-KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 351

Query: 250 LIVAYLSAPIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSKPGDLSKHHLKQAE 309
           LI  +      G I+     Y +M+  G  +P + L+N+L      K GDL       A 
Sbjct: 352 LIHGHSR---NGEIDLMKESYQKMLSKG-LQPDIVLYNTLVNGFC-KNGDLVA-----AR 411

Query: 310 FIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVSILR 369
            I   ++  GL   K  Y  LI    +    D E  + +RKEM Q GIE +R    +++ 
Sbjct: 412 NIVDGMIRRGLRPDKITYTTLI--DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 471

Query: 370 ASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREMEQLNSV- 429
              K G V++AER+  ++           +   M+ + K G+    F++ +EM+    V 
Sbjct: 472 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 531

Query: 430 SAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLM 473
           S   Y  ++  LCK+ ++  A+ +++  +   + P    Y  L+
Sbjct: 532 SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562

BLAST of Cp4.1LG02g11170 vs. TAIR10
Match: AT2G17140.1 (AT2G17140.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 74.7 bits (182), Expect = 2.9e-13
Identity = 78/334 (23.35%), Postives = 153/334 (45.81%), Query Frame = 1

Query: 229 REVFDDIINQGCVPSESTFHILIVAYLSAPIQGCIEEASAIYNRMIQLGGYEPRLSLHNS 288
           RE+FD++  +GC P+E TF IL+  Y  A   G  ++   + N M +  G  P   ++N+
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKA---GLTDKGLELLNAM-ESFGVLPNKVIYNT 226

Query: 289 LFKALL--SKPGDLSKHHLKQAEFIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIM 348
           +  +     +  D  K   K  E     LV   +  +  I A    L      +D  RI 
Sbjct: 227 IVSSFCREGRNDDSEKMVEKMRE---EGLVPDIVTFNSRISA----LCKEGKVLDASRIF 286

Query: 349 SLRKEMQQAGIEEEREVLVSI-LRASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEV 408
           S  +  +  G+     +  ++ L+   K+G + +A+  +  ++  D     Q++   ++ 
Sbjct: 287 SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQG 346

Query: 409 YAKVGNPMKAFEIFREMEQLN-SVSAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPL 468
             + G  ++A  + ++M       S  +Y  ++  LCK+  ++ A++++    ++ + P 
Sbjct: 347 LVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPD 406

Query: 469 KPAYVDLMNMFFNLSLHDKLELTFSQCL-EKCKPNRTIYSIYLNSLVKVGNLDRAEEIFS 528
              Y  L++ + ++   D  +    + +   C PN    +I L+SL K+G +  AEE+  
Sbjct: 407 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 466

Query: 529 QMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKI 558
           +M   G  G+   +CNII+ G   SG+  KA +I
Sbjct: 467 KMNEKG-YGLDTVTCNIIVDGLCGSGELDKAIEI 488

BLAST of Cp4.1LG02g11170 vs. TAIR10
Match: AT1G51965.1 (AT1G51965.1 ABA Overly-Sensitive 5)

HSP 1 Score: 73.9 bits (180), Expect = 5.0e-13
Identity = 91/373 (24.40%), Postives = 165/373 (44.24%), Query Frame = 1

Query: 164 LNAQRKW-MKQDDAAY--VIVHCLRIRENETAFRVYKWMMQQHWYRFDYALATKLADYMG 223
           L   +KW +K +   Y  ++   LR R+   AF VY   +++  ++ D      L D + 
Sbjct: 191 LRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVY-CEIRRGGHKLDIFAYNMLLDALA 250

Query: 224 KERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPIQGCIEEASAIYNRMIQLGGYE 283
           K+ K     +VF+D+  + C   E T+ I+I         G  +EA  ++N MI   G  
Sbjct: 251 KDEKAC---QVFEDMKKRHCRRDEYTYTIMIRTMGRI---GKCDEAVGLFNEMIT-EGLT 310

Query: 284 PRLSLHNSLFKALLSKPGDLSKHHLKQAEFIYHNLVTTGLELHKDIYAGLI-WLHSYQDT 343
             +  +N+L + L    G +    + +A  ++  +V TG   ++  Y+ L+  L +    
Sbjct: 311 LNVVGYNTLMQVLAK--GKM----VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL 370

Query: 344 VDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGDVMEAERSWLKLKSFDGSMPSQAF 403
           V  + ++ + K     GI         ++R  SKLG V EA R +  + SF       ++
Sbjct: 371 VRLDGVVEISKRYMTQGIYSY------LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSY 430

Query: 404 VYKMEVYAKVGNPMKAFEIFREMEQLNSVS-AAAYQTIIGILCKVEEVTLAESVMEGFIK 463
           +  +E     G  ++A E+  ++ +   V+    Y T+   L K+++++    + E   K
Sbjct: 431 MSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKK 490

Query: 464 SNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEK--CKPNRTIYSIYLNSLVKVGNLD 523
               P    Y  L+  F  +   D+    F + LE+  CKP+   Y+  +N L K G++D
Sbjct: 491 DGPSPDIFTYNILIASFGRVGEVDEAINIFEE-LERSDCKPDIISYNSLINCLGKNGDVD 542

Query: 524 RAEEIFSQMQTNG 530
            A   F +MQ  G
Sbjct: 551 EAHVRFKEMQEKG 542

BLAST of Cp4.1LG02g11170 vs. TAIR10
Match: AT1G09820.1 (AT1G09820.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 70.9 bits (172), Expect = 4.2e-12
Identity = 72/349 (20.63%), Postives = 138/349 (39.54%), Query Frame = 1

Query: 221 KERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPIQGCIEEASAIYNRMIQLGGYE 280
           K  K +K R+V +D+   GC P+  +++ LI  Y      G + +A A+   M++     
Sbjct: 235 KTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE-NDVS 294

Query: 281 PRLSLHNSLFKALLSK---PGDLSKHHLKQAEFIYHNLVTTGLELHKDIYAGLIWLHSYQ 340
           P L+  N L          PG +        + +  N+++    ++     G I      
Sbjct: 295 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKI------ 354

Query: 341 DTVDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGDVMEAERSWLKLKSFDGSMPSQ 400
                   +S+R +M  AG++       +++    K   + EA   +  +K       ++
Sbjct: 355 -----SEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 414

Query: 401 AFVYKMEVYAKVGNPMKAFEIFREMEQLNSV-SAAAYQTIIGILCKVEEVTLAESVMEGF 460
            +   ++ Y K+G     F +  EME+   V     Y  +I  LC+   +  A+ + +  
Sbjct: 415 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 474

Query: 461 IKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEK-CKPNRTIYSIYLNSLVKVGNL 520
               L  L   ++ LM  +       K  +   +  +   KP    Y+I +    K GNL
Sbjct: 475 TSKGLPDLVTFHI-LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 534

Query: 521 DRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKIYDLMCQK 565
             A  + +QM+    + ++  S N++L GY   G    A  + + M +K
Sbjct: 535 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570

BLAST of Cp4.1LG02g11170 vs. NCBI nr
Match: gi|659130269|ref|XP_008465080.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15820 [Cucumis melo])

HSP 1 Score: 1327.4 bits (3434), Expect = 0.0e+00
Identity = 665/795 (83.65%), Postives = 717/795 (90.19%), Query Frame = 1

Query: 24  SMSIRTSAFATVTLLRSLTLSFPLCHHHFRCRNYVIRSLSIPTYSAKGRRQLTRIPAFAS 83
           SMSI TSAF+TVTLLRSLTLS    HH+F   N++I +L I +YS K R QL RI AFAS
Sbjct: 4   SMSIPTSAFSTVTLLRSLTLSLSPYHHYFHYPNHIIPTLFISSYSVKVR-QLPRIRAFAS 63

Query: 84  SSSVEALVHDRDSPAESEEPLCSPYSTGAE------GFASADLKHLGAPALEVKELDELP 143
            S V+ LV+DRDSP+ESEE L SPYS G +      GFAS DLKHLG PALEVKELDELP
Sbjct: 64  GSFVKQLVYDRDSPSESEEHLSSPYSNGGDGFHFENGFASVDLKHLGTPALEVKELDELP 123

Query: 144 EQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYVIVHCLRIRENETAFRVYK 203
           EQWRRSKLAWLCKELPA KPGT+IRLLNAQRKWM QDDA Y+ VHCLRIRENETAFRVYK
Sbjct: 124 EQWRRSKLAWLCKELPAQKPGTVIRLLNAQRKWMGQDDATYLTVHCLRIRENETAFRVYK 183

Query: 204 WMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSA 263
           WMMQQHWYRFDYAL+TKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSA
Sbjct: 184 WMMQQHWYRFDYALSTKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSA 243

Query: 264 PIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSKPGDLSKHHLKQAEFIYHNLVT 323
           P+QGCIEEAS IYNRMIQLGGY+PRLSLH+SLF+AL+SKPGDLSKHHLKQAEFIYHNLVT
Sbjct: 244 PVQGCIEEASTIYNRMIQLGGYQPRLSLHSSLFRALMSKPGDLSKHHLKQAEFIYHNLVT 303

Query: 324 TGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGDV 383
           +GLELHKDIY GLIWLHSYQDT+DKERI+SLRKEMQQAGI+EE+EVL+SILRASSK+GDV
Sbjct: 304 SGLELHKDIYGGLIWLHSYQDTIDKERIVSLRKEMQQAGIKEEKEVLLSILRASSKMGDV 363

Query: 384 MEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREMEQLNSVSAAAYQTII 443
           +EAER W KLK  DG+MP QAFVYKMEVYAK+G PMKA EIFREMEQLNS +AAAYQTII
Sbjct: 364 VEAERLWQKLKYLDGNMPYQAFVYKMEVYAKMGKPMKALEIFREMEQLNSTNAAAYQTII 423

Query: 444 GILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKP 503
           GILCK +E+ LAES+M GFI+SNLKPL PAYVD+MNMFFNLSLHDKLELTFSQCLEKCKP
Sbjct: 424 GILCKFQEIELAESIMAGFIESNLKPLTPAYVDMMNMFFNLSLHDKLELTFSQCLEKCKP 483

Query: 504 NRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKI 563
           NRTIYSIYL+SLVKVGNLDRAEEIFSQM+TNGEIGV+ARSCN+IL GYLL G+Y+KAEKI
Sbjct: 484 NRTIYSIYLDSLVKVGNLDRAEEIFSQMETNGEIGVNARSCNLILCGYLLFGNYMKAEKI 543

Query: 564 YDLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVGLLLGGLEIESDE 623
           YDLMCQKKYDIDPPLMEKLDYVLSLSRKE+KKP+SLKLSKEQREILVGLLLGGLEIESDE
Sbjct: 544 YDLMCQKKYDIDPPLMEKLDYVLSLSRKEVKKPMSLKLSKEQREILVGLLLGGLEIESDE 603

Query: 624 GRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWLHPASKSSDSDTDIPYKFCTVSHSYFGF 683
            RKNHRIQFEFH++  THS LRRHIYEQYH+WLH ASK +D D DIPYKFCTVSHSYFGF
Sbjct: 604 ERKNHRIQFEFHKNCKTHSVLRRHIYEQYHKWLHSASKLTDGDIDIPYKFCTVSHSYFGF 663

Query: 684 YADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKGSREGVAKIVKSL 743
           YADQFWPRG   IPNLIHRWLSPR LAYWYMYGGCR SSGD +LKLKGS EGV KIVKSL
Sbjct: 664 YADQFWPRGRQTIPNLIHRWLSPRALAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVKSL 723

Query: 744 GEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDRLQADSLNMEKAVNETYN 803
            EKSM CKVKRKG +YWIGLLGSNATWFWKLIEPFILDDLK+  QADSLN+   +NET N
Sbjct: 724 REKSMHCKVKRKGSMYWIGLLGSNATWFWKLIEPFILDDLKESTQADSLNL-GVLNETEN 783

Query: 804 INFDSQSDSDEEASS 813
           INFDSQSDS EE S+
Sbjct: 784 INFDSQSDSVEETSN 796

BLAST of Cp4.1LG02g11170 vs. NCBI nr
Match: gi|778682097|ref|XP_004152074.2| (PREDICTED: pentatricopeptide repeat-containing protein At2g15820 [Cucumis sativus])

HSP 1 Score: 1315.1 bits (3402), Expect = 0.0e+00
Identity = 651/795 (81.89%), Postives = 714/795 (89.81%), Query Frame = 1

Query: 24  SMSIRTSAFATVTLLRSLTLSFPLCHHHFRCRNYVIRSLSIPTYSAKGRRQLTRIPAFAS 83
           SMSI TSAF+TVT LRSLTLS    HH+F C N++I +L +P YS K RRQL RI AFAS
Sbjct: 4   SMSIPTSAFSTVTRLRSLTLSLSPYHHYFHCPNHIIPTLFLPAYSVKVRRQLPRIRAFAS 63

Query: 84  SSSVEALVHDRDSPAESEEPLCSPYSTGAE------GFASADLKHLGAPALEVKELDELP 143
            S V+ LV+D DSP+ESEE L S +S G +      GFAS DLKHLG P LEVKELDELP
Sbjct: 64  GSFVKQLVYDHDSPSESEEHLSSSFSNGGDGFHFENGFASVDLKHLGTPVLEVKELDELP 123

Query: 144 EQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYVIVHCLRIRENETAFRVYK 203
           EQWRRSK+AWLCKELPA KPGT+IRLLNAQ+KWM QDDA Y+IVHCLRIRENETAFRVYK
Sbjct: 124 EQWRRSKVAWLCKELPAQKPGTVIRLLNAQKKWMGQDDATYLIVHCLRIRENETAFRVYK 183

Query: 204 WMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSA 263
           WMMQQHWYRFDYAL+TKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSA
Sbjct: 184 WMMQQHWYRFDYALSTKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSA 243

Query: 264 PIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSKPGDLSKHHLKQAEFIYHNLVT 323
           P+QGCIEEAS IYNRMIQLGGY+PRLSLH+SLF+AL+SKPGDLSKHHLKQAEFIYHNLVT
Sbjct: 244 PVQGCIEEASTIYNRMIQLGGYQPRLSLHSSLFRALVSKPGDLSKHHLKQAEFIYHNLVT 303

Query: 324 TGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGDV 383
           +GLELHKD+Y GLIWLHSYQDT+D+ERI+SLRKEMQQAGI+EEREVL+SILRASSK+GDV
Sbjct: 304 SGLELHKDMYGGLIWLHSYQDTIDRERIVSLRKEMQQAGIKEEREVLLSILRASSKMGDV 363

Query: 384 MEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREMEQLNSVSAAAYQTII 443
           MEAE+ W +LK  DG+MPSQAFVYKMEVYAK+G PMKA EIFREMEQLNS +AAAYQTII
Sbjct: 364 MEAEKLWQELKYLDGNMPSQAFVYKMEVYAKMGKPMKALEIFREMEQLNSTNAAAYQTII 423

Query: 444 GILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKP 503
           GILCK + + LAES+M GFI+SNLKPL PAYVDLMNMFFNL+L DKLELTFSQCLEKCKP
Sbjct: 424 GILCKFQVIELAESIMAGFIESNLKPLTPAYVDLMNMFFNLNLDDKLELTFSQCLEKCKP 483

Query: 504 NRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKI 563
           NRTIYSIYL+SLVKVGNLDRAEEIFSQM+TNGEIG++ARSCNIIL GYLL G+Y+KAEKI
Sbjct: 484 NRTIYSIYLDSLVKVGNLDRAEEIFSQMETNGEIGINARSCNIILRGYLLCGNYMKAEKI 543

Query: 564 YDLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVGLLLGGLEIESDE 623
           YDLMCQK+YDIDPPLMEKL+Y+LSLSRKE+KKP+SLKLSKEQREILVGLLLGGLEIESD+
Sbjct: 544 YDLMCQKRYDIDPPLMEKLEYILSLSRKEVKKPMSLKLSKEQREILVGLLLGGLEIESDD 603

Query: 624 GRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWLHPASKSSDSDTDIPYKFCTVSHSYFGF 683
            RKNHRIQFEFH +  THS LRRHIYEQYH+WLH ASK +D D DIPYKFCTVSHSYFGF
Sbjct: 604 ERKNHRIQFEFHRNCKTHSVLRRHIYEQYHKWLHSASKLTDGDVDIPYKFCTVSHSYFGF 663

Query: 684 YADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKGSREGVAKIVKSL 743
           YADQFWPRG  AIPNLIHRWLSPRVLAYWYMYGGCR SSGD +LKLKGS EGV KIVKSL
Sbjct: 664 YADQFWPRGRRAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIVKSL 723

Query: 744 GEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDRLQADSLNMEKAVNETYN 803
            EKS+ CKVKRKG +YWIGLLGSNATWFWKLIEPFILD LK+  QADSLN+   +N + N
Sbjct: 724 REKSIHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKESTQADSLNLVGVLNGSEN 783

Query: 804 INFDSQSDSDEEASS 813
           INFDS+SDS EE S+
Sbjct: 784 INFDSESDSVEETSN 798

BLAST of Cp4.1LG02g11170 vs. NCBI nr
Match: gi|645262143|ref|XP_008236630.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15820 [Prunus mume])

HSP 1 Score: 1081.6 bits (2796), Expect = 0.0e+00
Identity = 548/809 (67.74%), Postives = 649/809 (80.22%), Query Frame = 1

Query: 13  STVLLNSPSSSSMSIRTSAFATVTLLRSLTLSFPLCHHHFRCRNYVIRSLS-IPTYSAKG 72
           S++  ++P +  + +R+S    ++LLRSLTLS  L HHH+   + + R +S  P   A  
Sbjct: 25  SSLFSSNPKTKPLPMRSS----LSLLRSLTLS--LSHHHYHPTHRLPRPISGFPLAVAAK 84

Query: 73  RRQLTRIPAFASSSSVEALVHDRDSPAESEEPLCSPYSTGAEG--------FASADLKHL 132
            R++  +P+  SS+ VE L  +   P E+ +      S  A+G        F+SADLKHL
Sbjct: 85  SRRVLALPS--SSTFVEHLSGEVSQPGENWD-----LSNVAQGEAFDLDKCFSSADLKHL 144

Query: 133 GAPALEVKELDELPEQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYVIVHC 192
             P LEV EL++LPEQWRRSKLAWLCKELPAHK GTL R+LNAQ+KWM+Q+DA YV VHC
Sbjct: 145 AVPELEVPELEDLPEQWRRSKLAWLCKELPAHKAGTLSRILNAQKKWMRQEDATYVAVHC 204

Query: 193 LRIRENETAFRVYKWMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPS 252
           +RIREN+  FRVYKWMMQQHWYRFD+ALATKLADYMGKERK SKCR++FDDIINQG VPS
Sbjct: 205 MRIRENDVGFRVYKWMMQQHWYRFDFALATKLADYMGKERKSSKCRDIFDDIINQGRVPS 264

Query: 253 ESTFHILIVAYLSAPIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSKPGDLSKH 312
           ESTFHIL+VAYLSA +QGC+EEA  IYNRMIQLGGY+PRLSLHNSLFKAL+SKPG  SKH
Sbjct: 265 ESTFHILVVAYLSASVQGCLEEACGIYNRMIQLGGYQPRLSLHNSLFKALVSKPGTSSKH 324

Query: 313 HLKQAEFIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREV 372
           +LKQAEFI+HNLVTTGLE+HKDIY+GLIWLHS QDT+DKER+ SLRKEMQQAGIE  R+V
Sbjct: 325 YLKQAEFIFHNLVTTGLEIHKDIYSGLIWLHSCQDTIDKERMTSLRKEMQQAGIEVGRDV 384

Query: 373 LVSILRASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREM- 432
           LVSILRA SK GDV EAE +WLKL   D  +PSQA+VYKME Y+K G P ++ EIFREM 
Sbjct: 385 LVSILRACSKEGDVEEAESTWLKLLHLDVGLPSQAYVYKMEAYSKAGEPRRSLEIFREMQ 444

Query: 433 EQLNSVSAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLHD 492
           EQL S +A AY  +I +LCK +EV LAES+M  FI   LK   P+Y+DLMNM+FNL  HD
Sbjct: 445 EQLGSANAVAYHKVIEVLCKAQEVELAESLMTDFINIGLKTFMPSYIDLMNMYFNLGSHD 504

Query: 493 KLELTFSQCLEKCKPNRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIIL 552
           KLE  F QCLE+C+P+RTIYSIYL+SLVKVGNLD+AEEIF QMQ NG  G++ARSCN IL
Sbjct: 505 KLESAFFQCLERCRPSRTIYSIYLDSLVKVGNLDKAEEIFDQMQRNGATGINARSCNTIL 564

Query: 553 SGYLLSGDYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREI 612
           SGYL SGDY+KAEKI+DLMCQKKYD+D PLMEK+DYVLSLSRK +K+PVSLKLSKEQRE+
Sbjct: 565 SGYLSSGDYVKAEKIFDLMCQKKYDVDSPLMEKIDYVLSLSRKVVKRPVSLKLSKEQREV 624

Query: 613 LVGLLLGGLEIESDEGRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWLHPASKSSDSDTD 672
           LVG+LLGGL+IESDE RKNH I+FEF E+ STHS LRRH+Y+QYHEWLHP+ K+S+S  D
Sbjct: 625 LVGMLLGGLQIESDEDRKNHMIRFEFSENSSTHSLLRRHMYDQYHEWLHPSCKTSESTDD 684

Query: 673 IPYKFCTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLK 732
           IPYKF T+SHS  GFYADQFWP+G   IP LIHRWLSP  LAYWYMYGG R SSGD +LK
Sbjct: 685 IPYKFSTISHSCLGFYADQFWPKGRQVIPKLIHRWLSPCALAYWYMYGGHRSSSGDILLK 744

Query: 733 LKGSREGVAKIVKSLGEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDRLQ 792
           +KG+ EGV KIV++L  KS+ CKVKRKGRV+WIG LGSN+TWFWKL+EP+ILDDLK  L+
Sbjct: 745 IKGNEEGVEKIVRALKAKSLDCKVKRKGRVFWIGFLGSNSTWFWKLVEPYILDDLKHLLK 804

Query: 793 ADSLNMEKAVNETYNINFDSQSDSDEEAS 812
              ++   AV ET N+NF S SD+DE AS
Sbjct: 805 GGQISDNSAV-ETENVNFGSGSDTDENAS 819

BLAST of Cp4.1LG02g11170 vs. NCBI nr
Match: gi|225428729|ref|XP_002281969.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15820 [Vitis vinifera])

HSP 1 Score: 1073.2 bits (2774), Expect = 2.5e-310
Identity = 550/838 (65.63%), Postives = 652/838 (77.80%), Query Frame = 1

Query: 3   LVNPKPKVSSSTVLLNSPSSSS--------MSIRTSAFATVTLLRSLTLSFPLCHHHFRC 62
           L+    ++SSST+ + +  SSS        + +RT   ++++LLRSL+   P  HH F C
Sbjct: 2   LIGRAQELSSSTLTITTAFSSSPNPNYTFSLPMRTPVLSSLSLLRSLS---PSLHHRFLC 61

Query: 63  RNYVIRSLSIPTYSAK----------GRRQLTRIPAFAS--SSSVEALVHDRDSPAESEE 122
                 SLS+  YS                L R P  A   SS VE +V       ESE 
Sbjct: 62  ------SLSLSNYSKSFFFPLPTTNIRHSSLFRRPPLAKPLSSFVEQVV------GESER 121

Query: 123 PLCSPYSTGAEG--------FASADLKHLGAPALEVKELDELPEQWRRSKLAWLCKELPA 182
                +S G EG        F S DL+HL +P+LEVKEL+ELPEQWRRSKLAWLCKELPA
Sbjct: 122 DENEGFSRGGEGESFDFGVAFGSTDLRHLSSPSLEVKELEELPEQWRRSKLAWLCKELPA 181

Query: 183 HKPGTLIRLLNAQRKWMKQDDAAYVIVHCLRIRENETAFRVYKWMMQQHWYRFDYALATK 242
           HKP TLIR+LNAQ+KW++Q+DA Y+ VHC+RIRENET FRVYKWMMQQHW++FD+ALATK
Sbjct: 182 HKPATLIRILNAQKKWVRQEDATYIAVHCMRIRENETGFRVYKWMMQQHWFQFDFALATK 241

Query: 243 LADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPIQGCIEEASAIYNRMI 302
           LADYMGKERKFSKCRE+FDDII QG VP ESTFHILI+AYLSA +QGC++EA  IYNRMI
Sbjct: 242 LADYMGKERKFSKCREIFDDIIKQGLVPCESTFHILIIAYLSASVQGCLDEACGIYNRMI 301

Query: 303 QLGGYEPRLSLHNSLFKALLSKPGDLSKHHLKQAEFIYHNLVTTGLELHKDIYAGLIWLH 362
           QLGGY+PRLSLHNSLF+AL+ +PG  SK+ LKQAEFI+HNLVT G E+HKD+Y GLIWLH
Sbjct: 302 QLGGYQPRLSLHNSLFRALVGQPGGSSKYFLKQAEFIFHNLVTFGFEIHKDVYGGLIWLH 361

Query: 363 SYQDTVDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGDVMEAERSWLKLKSFDGSM 422
           SYQDT+D+ERI SLR+EMQ AGIEE R+VL+SILRA SK GDV EAE++WLKL   D ++
Sbjct: 362 SYQDTIDRERIASLREEMQLAGIEESRDVLLSILRACSKEGDVEEAEKTWLKLLHSDCAI 421

Query: 423 PSQAFVYKMEVYAKVGNPMKAFEIFREM-EQLNSVSAAAYQTIIGILCKVEEVTLAESVM 482
           PSQ FVY+MEVYAKVG PMK+ EIFREM EQL S S  AY  II +L K +E+ L ES+M
Sbjct: 422 PSQGFVYRMEVYAKVGEPMKSLEIFREMQEQLGSTSVVAYHKIIEVLSKAQEIELVESLM 481

Query: 483 EGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPNRTIYSIYLNSLVKVG 542
             FI S +KPL P+Y+DLMNM+FNLSLHDKLE  F +CLEKC+PNR IY+IY++SLV++G
Sbjct: 482 TEFINSGMKPLMPSYIDLMNMYFNLSLHDKLEAAFYECLEKCRPNRAIYNIYMDSLVQIG 541

Query: 543 NLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKIYDLMCQKKYDIDPPLM 602
           NLD+AEEIF+QM +NG IGV+ +SCN ILSGYL  GDYLKAEKIYDLMCQKKY ID PLM
Sbjct: 542 NLDKAEEIFNQMYSNGAIGVNTKSCNTILSGYLSCGDYLKAEKIYDLMCQKKYAIDAPLM 601

Query: 603 EKLDYVLSLSRKEIKKPVSLKLSKEQREILVGLLLGGLEIESDEGRKNHRIQFEFHEDRS 662
           EKLDYVLSLSRK +K+PVSLKLSKEQREIL+GLLLGGL++ESDE RKNH I FEF+E+  
Sbjct: 602 EKLDYVLSLSRKVVKRPVSLKLSKEQREILIGLLLGGLQMESDEERKNHVIYFEFNENSG 661

Query: 663 THSRLRRHIYEQYHEWLHPASKSSDSDTDIPYKFCTVSHSYFGFYADQFWPRGHPAIPNL 722
            HS LRRHI+EQYHEWL+ +SK SD + D+PYKF T+SHSYFGFYADQFWPRG P IP L
Sbjct: 662 AHSVLRRHIHEQYHEWLNSSSKLSDDNDDVPYKFSTISHSYFGFYADQFWPRGRPMIPKL 721

Query: 723 IHRWLSPRVLAYWYMYGGCRISSGDFVLKLKGSREGVAKIVKSLGEKSMSCKVKRKGRVY 782
           IHRWLSPRVLAYWYMYGG R SSGD +LKLKGSREGV K+V++L  +SM C+VKRKG V+
Sbjct: 722 IHRWLSPRVLAYWYMYGGHRTSSGDILLKLKGSREGVEKVVRTLKAQSMDCRVKRKGTVF 781

Query: 783 WIGLLGSNATWFWKLIEPFILDDLKDRLQADSLNMEKAVNETYNINFDSQSDSDEEAS 812
           WIGLLGSN+TWFWKLIEP+ILDD+KD ++A   N          I+F S SD+DE A+
Sbjct: 782 WIGLLGSNSTWFWKLIEPYILDDVKDFVKAGCQN---------TISFGSGSDTDENAA 815

BLAST of Cp4.1LG02g11170 vs. NCBI nr
Match: gi|297741318|emb|CBI32449.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 1071.2 bits (2769), Expect = 8.8e-310
Identity = 542/806 (67.25%), Postives = 637/806 (79.03%), Query Frame = 1

Query: 27  IRTSAFATVTLLRSLTLSFPLCHHHFRCRNYVIRSLSIPTYSAK----------GRRQLT 86
           +RT   ++++LLRSL+   P  HH F C      SLS+  YS                L 
Sbjct: 1   MRTPVLSSLSLLRSLS---PSLHHRFLC------SLSLSNYSKSFFFPLPTTNIRHSSLF 60

Query: 87  RIPAFAS--SSSVEALVHDRDSPAESEEPLCSPYSTGAEG--------FASADLKHLGAP 146
           R P  A   SS VE +V       ESE      +S G EG        F S DL+HL +P
Sbjct: 61  RRPPLAKPLSSFVEQVV------GESERDENEGFSRGGEGESFDFGVAFGSTDLRHLSSP 120

Query: 147 ALEVKELDELPEQWRRSKLAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYVIVHCLRI 206
           +LEVKEL+ELPEQWRRSKLAWLCKELPAHKP TLIR+LNAQ+KW++Q+DA Y+ VHC+RI
Sbjct: 121 SLEVKELEELPEQWRRSKLAWLCKELPAHKPATLIRILNAQKKWVRQEDATYIAVHCMRI 180

Query: 207 RENETAFRVYKWMMQQHWYRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSEST 266
           RENET FRVYKWMMQQHW++FD+ALATKLADYMGKERKFSKCRE+FDDII QG VP EST
Sbjct: 181 RENETGFRVYKWMMQQHWFQFDFALATKLADYMGKERKFSKCREIFDDIIKQGLVPCEST 240

Query: 267 FHILIVAYLSAPIQGCIEEASAIYNRMIQLGGYEPRLSLHNSLFKALLSKPGDLSKHHLK 326
           FHILI+AYLSA +QGC++EA  IYNRMIQLGGY+PRLSLHNSLF+AL+ +PG  SK+ LK
Sbjct: 241 FHILIIAYLSASVQGCLDEACGIYNRMIQLGGYQPRLSLHNSLFRALVGQPGGSSKYFLK 300

Query: 327 QAEFIYHNLVTTGLELHKDIYAGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVS 386
           QAEFI+HNLVT G E+HKD+Y GLIWLHSYQDT+D+ERI SLR+EMQ AGIEE R+VL+S
Sbjct: 301 QAEFIFHNLVTFGFEIHKDVYGGLIWLHSYQDTIDRERIASLREEMQLAGIEESRDVLLS 360

Query: 387 ILRASSKLGDVMEAERSWLKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREM-EQL 446
           ILRA SK GDV EAE++WLKL   D ++PSQ FVY+MEVYAKVG PMK+ EIFREM EQL
Sbjct: 361 ILRACSKEGDVEEAEKTWLKLLHSDCAIPSQGFVYRMEVYAKVGEPMKSLEIFREMQEQL 420

Query: 447 NSVSAAAYQTIIGILCKVEEVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLE 506
            S S  AY  II +L K +E+ L ES+M  FI S +KPL P+Y+DLMNM+FNLSLHDKLE
Sbjct: 421 GSTSVVAYHKIIEVLSKAQEIELVESLMTEFINSGMKPLMPSYIDLMNMYFNLSLHDKLE 480

Query: 507 LTFSQCLEKCKPNRTIYSIYLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGY 566
             F +CLEKC+PNR IY+IY++SLV++GNLD+AEEIF+QM +NG IGV+ +SCN ILSGY
Sbjct: 481 AAFYECLEKCRPNRAIYNIYMDSLVQIGNLDKAEEIFNQMYSNGAIGVNTKSCNTILSGY 540

Query: 567 LLSGDYLKAEKIYDLMCQKKYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVG 626
           L  GDYLKAEKIYDLMCQKKY ID PLMEKLDYVLSLSRK +K+PVSLKLSKEQREIL+G
Sbjct: 541 LSCGDYLKAEKIYDLMCQKKYAIDAPLMEKLDYVLSLSRKVVKRPVSLKLSKEQREILIG 600

Query: 627 LLLGGLEIESDEGRKNHRIQFEFHEDRSTHSRLRRHIYEQYHEWLHPASKSSDSDTDIPY 686
           LLLGGL++ESDE RKNH I FEF+E+   HS LRRHI+EQYHEWL+ +SK SD + D+PY
Sbjct: 601 LLLGGLQMESDEERKNHVIYFEFNENSGAHSVLRRHIHEQYHEWLNSSSKLSDDNDDVPY 660

Query: 687 KFCTVSHSYFGFYADQFWPRGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKG 746
           KF T+SHSYFGFYADQFWPRG P IP LIHRWLSPRVLAYWYMYGG R SSGD +LKLKG
Sbjct: 661 KFSTISHSYFGFYADQFWPRGRPMIPKLIHRWLSPRVLAYWYMYGGHRTSSGDILLKLKG 720

Query: 747 SREGVAKIVKSLGEKSMSCKVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDRLQADS 806
           SREGV K+V++L  +SM C+VKRKG V+WIGLLGSN+TWFWKLIEP+ILDD+KD ++A  
Sbjct: 721 SREGVEKVVRTLKAQSMDCRVKRKGTVFWIGLLGSNSTWFWKLIEPYILDDVKDFVKAGC 780

Query: 807 LNMEKAVNETYNINFDSQSDSDEEAS 812
            N          I+F S SD+DE A+
Sbjct: 781 QN---------TISFGSGSDTDENAA 782

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP154_ARATH1.9e-25655.39Pentatricopeptide repeat-containing protein At2g15820, chloroplastic OS=Arabidop... [more]
OTP51_ORYSJ4.7e-23153.93Pentatricopeptide repeat-containing protein OTP51, chloroplastic OS=Oryza sativa... [more]
PPR26_ARATH6.1e-1325.00Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th... [more]
PP158_ARATH5.2e-1223.35Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana GN... [more]
PPR76_ARATH8.8e-1224.40Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LBL0_CUCSA0.0e+0081.89Uncharacterized protein OS=Cucumis sativus GN=Csa_3G625100 PE=4 SV=1[more]
D7TPM6_VITVI6.2e-31067.25Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00900 PE=4 SV=... [more]
A0A061DZL4_THECC3.2e-30366.17Pentatricopeptide repeat-containing protein isoform 1 OS=Theobroma cacao GN=TCM_... [more]
B9S769_RICCO5.5e-30364.13Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
A0A067KPY6_JATCU8.7e-30163.34Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04884 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G15820.11.1e-25755.39 endonucleases[more]
AT1G09680.13.4e-1425.00 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G17140.12.9e-1323.35 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G51965.15.0e-1324.40 ABA Overly-Sensitive 5[more]
AT1G09820.14.2e-1220.63 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659130269|ref|XP_008465080.1|0.0e+0083.65PREDICTED: pentatricopeptide repeat-containing protein At2g15820 [Cucumis melo][more]
gi|778682097|ref|XP_004152074.2|0.0e+0081.89PREDICTED: pentatricopeptide repeat-containing protein At2g15820 [Cucumis sativu... [more]
gi|645262143|ref|XP_008236630.1|0.0e+0067.74PREDICTED: pentatricopeptide repeat-containing protein At2g15820 [Prunus mume][more]
gi|225428729|ref|XP_002281969.1|2.5e-31065.63PREDICTED: pentatricopeptide repeat-containing protein At2g15820 [Vitis vinifera... [more]
gi|297741318|emb|CBI32449.3|8.8e-31067.25unnamed protein product [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0004519endonuclease activity
Vocabulary: INTERPRO
TermDefinition
IPR027434Homing_endonucl
IPR011990TPR-like_helical_dom_sf
IPR004860LAGLIDADG_2
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000373 Group II intron splicing
biological_process GO:0045292 mRNA cis splicing, via spliceosome
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0048564 photosystem I assembly
biological_process GO:0009638 phototropism
biological_process GO:0007165 signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004871 signal transducer activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g11170.1Cp4.1LG02g11170.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 501..529
score: 0.0016coord: 404..425
score: 0.0098coord: 537..564
score: 0.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 501..529
score: 1.1E-4coord: 216..244
score: 4.6E-4coord: 537..568
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 325..359
score: 5.053coord: 208..242
score: 7.574coord: 534..568
score: 8.309coord: 360..394
score: 5.075coord: 429..463
score: 7.859coord: 243..281
score: 6.38coord: 395..425
score: 6.5coord: 498..532
score: 9
IPR004860Homing endonuclease, LAGLIDADGPFAMPF03161LAGLIDADG_2coord: 600..765
score: 4.9
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 208..299
score: 1.8E-8coord: 398..559
score: 1.
IPR027434Homing endonucleaseGENE3DG3DSA:3.10.28.10coord: 690..784
score: 1.4E-19coord: 571..687
score: 2.5
IPR027434Homing endonucleaseunknownSSF55608Homing endonucleasescoord: 591..781
score: 3.66
NoneNo IPR availableunknownCoilCoilcoord: 774..794
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 187..575
score: 1.0E-243coord: 43..170
score: 1.0E
NoneNo IPR availablePANTHERPTHR24015:SF899SUBFAMILY NOT NAMEDcoord: 43..170
score: 1.0E-243coord: 187..575
score: 1.0E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 373..567
score: 5.75E-9coord: 186..278
score: 1.49E-5coord: 394..436
score: 1.4

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g11170CmaCh01G007380Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g11170CmoCh01G007720Cucurbita moschata (Rifu)cmocpeB448
Cp4.1LG02g11170Carg07006Silver-seed gourdcarcpeB0738
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG02g11170Cp4.1LG00g04660Cucurbita pepo (Zucchini)cpecpeB009
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g11170Cucurbita pepo (Zucchini)cpecpeB010
Cp4.1LG02g11170Cucumber (Gy14) v1cgycpeB0261
Cp4.1LG02g11170Wild cucumber (PI 183967)cpecpiB535
Cp4.1LG02g11170Cucumber (Chinese Long) v2cpecuB533
Cp4.1LG02g11170Cucumber (Gy14) v2cgybcpeB098
Cp4.1LG02g11170Cucumber (Chinese Long) v3cpecucB0665