Cp4.1LG02g11160 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCATCGTCTCTGCCATCGGAGAAGTCTGCTAAACGCATGGAGATTTGAGGGAGCTATAAAAAACCTCCGTTTATTCGACAATGGCGTCTGCTCGGCTTTCTTATCCTCCGATCTCCCGCTTCCATTTTCATTGCCGTGATGACCTATTCTCTCGCTCTCCCCTCCACAATTTCTCTGAAGAAGTTGCCTCCCAATGCTTCCTCCTCTTTCAGGGCCTCCGCCTCCTTCATGGGCTTCAGAAATGGATTCCGAAGCTCTACTGGTGCAAACTTCTTGATACCTAGGGTTTTTATGAGCGATTCTGTTCGATCGCAGACGGTGAATGATGATTCATTGTTCTTGGATTATAAGCCCACTTTTGCTTTTCTGTTCCCTGGTCAGGTCAGTTTCTTCTTCTTTTTTTTGTATGTGTGTGTGTTTGGTATTGCTTACTTGATGCACTAGAAATGGTTTTTGAGAAGAATTAGACGTCCTCATGTTGAAATTGAGATCTAAATTTCTGATGAAATTGATGCATTTTAATAAGCATGTTCGTCCTCAATTTTTAGAAATGACGTATCACTGTGTTCCTATCATGTCGTATCCATGTCTCGCATTGTATTGTGAGATCCCACTTCGGTTGAAGAGGGGAACAAAACATTTATTGTAAGTGTGTGGAAGTCCATCCCTACCAGTTGCATTTTAGAACCACGGCCAAACGCAGACAATATCTGTTAGCAATGGGCTTGGATTGTTACAAATGGTATTAGAGTCAAACACTAGGTAGAGTACTGACAAGGATGTTGGGCCCCTAAGGGAATGAATTGTGAGATCTCGATGGTTGGTGTGCTAGCGAGGATGCTGACCCCAAAAAGGATGGATTGTGTGAGATCCTGATATCCCTCAAAGGGATGAATTGTGAGATCTCACATCGGTTGAAGAGGGGAACGAAGCTTATAAGAGTGTGCAACGGGTCAAAGCGGACAATAGGTGTATTGTACAAATAAAAGCAAATCACAAGAGAATAAGTATTCTCTACCTTTTATGACAACTCTACTGAGTTGATTAAGGAGTAGAAGAAGCAGTCTATTGTAGAGACGTCCACAACGTGGGCCGGGGATGGGTGAGCGGGATGAGAATTTGACAGGGTTGGAGACGAGGACCGCGAATATAATCTCAGTCTCCGGTCTCATTTAGTTAATGGAGAAAAATCTCTCCATATTACCTTTCCCATTCTTAGATTTTCCATCCCGTTTCGAGTAGGTCATCCCAGGTTAAGGACTATAGTTATGCTTTCCTTTTCTTTTTCTCTTAAGAACAAAACTTCGAATGTTTTTCCTTTCTTCACTCTCGAGTACTCAGGGTGCACAAGCTGTGGGAATGGGAAAGGAATCTCAAAGCGTTCCTGCTGCAGCTGACTTGTTCAAGACAGCTAATGATATTTTAGGGTACGTCCCCAATTAATTATTCCTCCATCTTGGATTAGTCCTTGCATTGACTTTAGTTCAAGGTCAACCATACTTAGAGAGTTGACCCTCCCCTTAGACTAACAGTCAATGGAGGGATTGCCCATGAGATGTAATGTTGTTTCATCTTTGTTTGCAGGTTTGATCTTCTTGATGTCTGCACTAATGGGCCAAAGGAAAAACTAGATTCAGCTATTATAAGTCAGGTACTTTATCTTGATCCATTCAATCTTCTCTTGTCAAAAGGCCCGTTTTCGAGAAGTTTAACCTTTTGCAAAGGGTGCATACGGGTTGGGTTGGTTAGGTTAGTGAACCGAACAACCTAAATAGAGTTCACAACCCAACCGAACTTTTATGATTTGAATTGAGTAGTCTGGATTGGTCGGATGATCAGGTCATATGAACACCTCTACCTTTTCCTTTTATCTTCGAGGAAATCTTATTAGTGTCTTCACCCTTATGAACTAGTGGTAGTTAATTATTGAGACCATTCATATATGTGCAACTGCAGCCAGCAATCTACGTCACAAGTCTAGCTGCAGTTGAGCTACTTCGTGCTCGTGATGGAGGCCAACAAATAATTGACTCTGTTGATGTCACTTGTGGTCTAAGCTTGGGCGAGTACGCCGCATTAACATTTGCAGGGGCTTTCAGGTGTATAATCAGTCCAGTAAATAGCATCAAATGAGCTTATCTTAGATCTTTATATGTAGACTCTGGTGATTCTGTTTCCACACTGACATGATTGCCAATGGGTTTGGTTCCATTTTTAGCTTTGAGGATGGACTCAGGCTGGTCAAGTTAAGGGGGGAGGCAATGCAGGTAACGATAACGAGTTCGTTAACGGGACGTTCCGATTTCAGCTACTGAAACCAAACCAGCCACCATAACTTCCTTCAGGCAGCTGCTGATAGTGCACAATGTGGCATGGTGAGTATCATAGGATTGGACGCAGACAAGGTTCAGCAACTCTGTGATTCAGCTAACCAAGAAGTCGATGAAGCCGGCAGAGTTCAGATAGCCAATTTCCTCTGTCCTGTAAGGCTCTTCTAAGCTGTTTGTTTCAAGTTTCATCAGCTTAGTTAATACTGTCTCCTATGATCACAGGGACATTATGTTGTATCAGGAGGTCTAAAAGGAGTAGAAGTCGTTGAAGCTAAGGCAAAGTCATTCAAAGCTCGAAAGACGGTATTGATCCATTTAAACGGAGATTTTCCATCCCATTCGGGATAATGGAACTTGAATTTTGAAGTCAAGTACTTCAGCTCTGTTAGAACTAACATGGCAATGGCTGCATAACACCATGGTAGGTTCGGCTAGCTGTGGCGGGGGCGCCCCATACTAGCTTCATGGAACCTGCTGTTTCGAGATTAGAAGCTGCACTTGCTGCTACTGATATCAGAACGCCCAGAATACCAATAATCTCCAATGTTGATGCACAGCCCCACGCAGATCCTGACACAATGAAGAAACTATTGGCACGCCATGTAATTAGCTCAACTTTCTAAACCAAGACTAATGACATCTTTGTGAGATCCCACATCGGTTAGGGAGGAGAACGAAATATTCTTTGTAAGGGTGTGAAAGCCTCGAAAGGGAAACTCCAAAGAAGACAATATCTGCTAGCGGTGAGCTTGAGCTGTTACAATTGGTATTAGAGCCAGACACTGGACGATGTGCTAGTGAGGAGGCTGGAAGGGGGGTGGACACTAGGCGGTGTGCATCTAGGACGCTGGGTCCTGAAGGCGGGTGGATTGGGTGGTCCCCATCAATTGGAGAAGGGAACGAGTGCCAGTGAGGACACTAGGCCTCAAAGAAAGGTGGATTGTGAGATCCTACACTGGTTGGAGAGAAGAACGAAATATTCTTTATAAGGGTGTGGAAAACTTTGAGGGGAAGCCCGAAAGGGGAAACTCAAAGAGGACAGTATCTGCTAGCGGTGAGCTAGGGCTGTTACATCCTTCATAATCCTTCGTAATTAGCTCAACGTTCTCTATCCCTGGCCCCGTTTAGCTTACGGGAAAAATCTTTCCCCACTTCCTTTCCCATTTATCATTTTTAGGTCTATCAACGATATAAGTTTATGGTGGATAAACATAAAAACAAATAGCAAAGATTAAATACCAATATTTTACGTATACTTTGAGGGTTAAGGTTTAAATTCTCGTAACTCTTCAGGTGACTTGTCCTGTTCAGTGGGAAACAACACTGAAAACTCTTCTCAACAAGGGGCTGAAAAAGAGCTATGAATTGGGTCCTGGAAAGGTATGAAACTCTACGCCAATTCTAAGCCTACCTTTGTGATCTTATTTGGGAAAATGTATTTTGTGAACAGATTATAGCTGGGATTGTGAAGAGAATGGATAAAAGTGCTGATATTGAGAATATTGGAGCTTCATGATGATGTCTGCATCAATGCTCTGTGTGTTCAGCTTCTTCTTATGCGTTCAGATGTTGCAATTGTTCTGAACAGTGCATGCGATTAATCTTTATGTATTTGAAGTTTTCTATTAGTAATAATATGCAAAATAAGTTGAAATT TCCATCGTCTCTGCCATCGGAGAAGTCTGCTAAACGCATGGAGATTTGAGGGAGCTATAAAAAACCTCCGTTTATTCGACAATGGCGTCTGCTCGGCTTTCTTATCCTCCGATCTCCCGCTTCCATTTTCATTGCCGTGATGACCTATTCTCTCGCTCTCCCCTCCACAATTTCTCTGAAGAAGTTGCCTCCCAATGCTTCCTCCTCTTTCAGGGCCTCCGCCTCCTTCATGGGCTTCAGAAATGGATTCCGAAGCTCTACTGGTGCAAACTTCTTGATACCTAGGGTTTTTATGAGCGATTCTGTTCGATCGCAGACGGTGAATGATGATTCATTGTTCTTGGATTATAAGCCCACTTTTGCTTTTCTGTTCCCTGGTCAGGGTGCACAAGCTGTGGGAATGGGAAAGGAATCTCAAAGCGTTCCTGCTGCAGCTGACTTGTTCAAGACAGCTAATGATATTTTAGGGTTTGATCTTCTTGATGTCTGCACTAATGGGCCAAAGGAAAAACTAGATTCAGCTATTATAAGTCAGCCAGCAATCTACGTCACAAGTCTAGCTGCAGTTGAGCTACTTCGTGCTCGTGATGGAGGCCAACAAATAATTGACTCTGTTGATGTCACTTGTGGTCTAAGCTTGGGCGAGTACGCCGCATTAACATTTGCAGGGGCTTTCAGCTTTGAGGATGGACTCAGGCTGGTCAAGTTAAGGGGGGAGGCAATGCAGGCAGCTGCTGATAGTGCACAATGTGGCATGGTGAGTATCATAGGATTGGACGCAGACAAGGTTCAGCAACTCTGTGATTCAGCTAACCAAGAAGTCGATGAAGCCGGCAGAGTTCAGATAGCCAATTTCCTCTGTCCTGGACATTATGTTGTATCAGGAGGTCTAAAAGGAGTAGAAGTCGTTGAAGCTAAGGCAAAGTCATTCAAAGCTCGAAAGACGGTGACTTGTCCTGTTCAGTGGGAAACAACACTGAAAACTCTTCTCAACAAGGGGCTGAAAAAGAGCTATGAATTGGGTCCTGGAAAGATTATAGCTGGGATTGTGAAGAGAATGGATAAAAGTGCTGATATTGAGAATATTGGAGCTTCATGATGATGTCTGCATCAATGCTCTGTGTGTTCAGCTTCTTCTTATGCGTTCAGATGTTGCAATTGTTCTGAACAGTGCATGCGATTAATCTTTATGTATTTGAAGTTTTCTATTAGTAATAATATGCAAAATAAGTTGAAATT ATGACCTATTCTCTCGCTCTCCCCTCCACAATTTCTCTGAAGAAGTTGCCTCCCAATGCTTCCTCCTCTTTCAGGGCCTCCGCCTCCTTCATGGGCTTCAGAAATGGATTCCGAAGCTCTACTGGTGCAAACTTCTTGATACCTAGGGTTTTTATGAGCGATTCTGTTCGATCGCAGACGGTGAATGATGATTCATTGTTCTTGGATTATAAGCCCACTTTTGCTTTTCTGTTCCCTGGTCAGGGTGCACAAGCTGTGGGAATGGGAAAGGAATCTCAAAGCGTTCCTGCTGCAGCTGACTTGTTCAAGACAGCTAATGATATTTTAGGGTTTGATCTTCTTGATGTCTGCACTAATGGGCCAAAGGAAAAACTAGATTCAGCTATTATAAGTCAGCCAGCAATCTACGTCACAAGTCTAGCTGCAGTTGAGCTACTTCGTGCTCGTGATGGAGGCCAACAAATAATTGACTCTGTTGATGTCACTTGTGGTCTAAGCTTGGGCGAGTACGCCGCATTAACATTTGCAGGGGCTTTCAGCTTTGAGGATGGACTCAGGCTGGTCAAGTTAAGGGGGGAGGCAATGCAGGCAGCTGCTGATAGTGCACAATGTGGCATGGTGAGTATCATAGGATTGGACGCAGACAAGGTTCAGCAACTCTGTGATTCAGCTAACCAAGAAGTCGATGAAGCCGGCAGAGTTCAGATAGCCAATTTCCTCTGTCCTGGACATTATGTTGTATCAGGAGGTCTAAAAGGAGTAGAAGTCGTTGAAGCTAAGGCAAAGTCATTCAAAGCTCGAAAGACGGTGACTTGTCCTGTTCAGTGGGAAACAACACTGAAAACTCTTCTCAACAAGGGGCTGAAAAAGAGCTATGAATTGGGTCCTGGAAAGATTATAGCTGGGATTGTGAAGAGAATGGATAAAAGTGCTGATATTGAGAATATTGGAGCTTCATGA MTYSLALPSTISLKKLPPNASSSFRASASFMGFRNGFRSSTGANFLIPRVFMSDSVRSQTVNDDSLFLDYKPTFAFLFPGQGAQAVGMGKESQSVPAAADLFKTANDILGFDLLDVCTNGPKEKLDSAIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYAALTFAGAFSFEDGLRLVKLRGEAMQAAADSAQCGMVSIIGLDADKVQQLCDSANQEVDEAGRVQIANFLCPGHYVVSGGLKGVEVVEAKAKSFKARKTVTCPVQWETTLKTLLNKGLKKSYELGPGKIIAGIVKRMDKSADIENIGAS
BLAST of Cp4.1LG02g11160 vs. Swiss-Prot
Match: FABD_MOUSE (Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Mus musculus GN=Mcat PE=1 SV=3) HSP 1 Score: 146.4 bits (368), Expect = 5.5e-34 Identity = 80/202 (39.60%), Postives = 115/202 (56.93%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. Swiss-Prot
Match: FABD_HUMAN (Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Homo sapiens GN=MCAT PE=1 SV=2) HSP 1 Score: 142.1 bits (357), Expect = 1.0e-32 Identity = 78/202 (38.61%), Postives = 116/202 (57.43%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. Swiss-Prot
Match: FABD_DROME (Probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Drosophila melanogaster GN=beg PE=2 SV=2) HSP 1 Score: 137.5 bits (345), Expect = 2.5e-31 Identity = 85/208 (40.87%), Postives = 120/208 (57.69%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. Swiss-Prot
Match: FABD_BACSU (Malonyl CoA-acyl carrier protein transacylase OS=Bacillus subtilis (strain 168) GN=fabD PE=3 SV=2) HSP 1 Score: 136.0 bits (341), Expect = 7.4e-31 Identity = 82/201 (40.80%), Postives = 117/201 (58.21%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. Swiss-Prot
Match: FABD_SALTY (Malonyl CoA-acyl carrier protein transacylase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fabD PE=1 SV=3) HSP 1 Score: 117.9 bits (294), Expect = 2.1e-25 Identity = 74/202 (36.63%), Postives = 109/202 (53.96%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. TrEMBL
Match: A0A0D9VT05_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 1.3e-111 Identity = 201/258 (77.91%), Postives = 230/258 (89.15%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. TrEMBL
Match: A0A0A0LVM3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533500 PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 3.0e-111 Identity = 221/274 (80.66%), Postives = 232/274 (84.67%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. TrEMBL
Match: A0A061GXM1_THECC (Catalytics,transferases, S-malonyltransferases,binding isoform 4 (Fragment) OS=Theobroma cacao GN=TCM_042223 PE=4 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 2.8e-109 Identity = 225/324 (69.44%), Postives = 244/324 (75.31%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. TrEMBL
Match: A0A077DAR7_9ERIC (Malonyl-CoA:ACP transacylase OS=Camellia oleifera PE=2 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.6e-104 Identity = 203/274 (74.09%), Postives = 232/274 (84.67%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. TrEMBL
Match: W9RA88_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011151 PE=4 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 2.4e-100 Identity = 199/274 (72.63%), Postives = 220/274 (80.29%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. TAIR10
Match: AT2G30200.1 (AT2G30200.1 catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding) HSP 1 Score: 357.5 bits (916), Expect = 8.8e-99 Identity = 195/272 (71.69%), Postives = 218/272 (80.15%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. NCBI nr
Match: gi|659114981|ref|XP_008457324.1| (PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial [Cucumis melo]) HSP 1 Score: 412.1 bits (1058), Expect = 8.6e-112 Identity = 221/274 (80.66%), Postives = 235/274 (85.77%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. NCBI nr
Match: gi|449455001|ref|XP_004145242.1| (PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial [Cucumis sativus]) HSP 1 Score: 409.8 bits (1052), Expect = 4.2e-111 Identity = 221/274 (80.66%), Postives = 232/274 (84.67%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. NCBI nr
Match: gi|590591355|ref|XP_007016991.1| (Catalytics,transferases, S-malonyltransferases,binding isoform 4, partial [Theobroma cacao]) HSP 1 Score: 403.3 bits (1035), Expect = 4.0e-109 Identity = 225/324 (69.44%), Postives = 244/324 (75.31%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. NCBI nr
Match: gi|674781076|gb|AIL29212.1| (malonyl-CoA:ACP transacylase [Camellia oleifera]) HSP 1 Score: 387.5 bits (994), Expect = 2.3e-104 Identity = 203/274 (74.09%), Postives = 232/274 (84.67%), Query Frame = 1
BLAST of Cp4.1LG02g11160 vs. NCBI nr
Match: gi|720027322|ref|XP_010264538.1| (PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial [Nelumbo nucifera]) HSP 1 Score: 382.5 bits (981), Expect = 7.3e-103 Identity = 205/274 (74.82%), Postives = 232/274 (84.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|