Cp4.1LG02g09790 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATCTCTCGCAAACTCTGTCTTCTGCAATAATTTCAATTTTTTTTTTTTTTTTCAAGTTTCAATCCATCTTCAGCAATGGTTTTTCCTCTCACAAGTGATATCATGGATTTTTTTGCATAGATTGATTGGGAGAGATGTGTGAGAGATGGAGAAGAAGAAAATCCAACATGATGGTAACACTAGAGTTTGAAGAGGAGAATTAAAATGTAATTTTCACCCTCAATGACACATGCAAAATCCTAGTTTTCTTCTTTTTCAAGTCGGAGGATATAAGGTTTTCCTTTGGGGTTGAGAAAAGTACGTTATTTTGCAACTTTTAAGGGTTTAAAGTCATTTTACTTGTAGATGATAGCAGAATTTCAGTTTTTTTTTTTTTAATTCTTTAAGGATTGGGTAAAAAATCTTTATCTATTCTAAATAAGGTTATTTTTAATAACTCTCATATCAAAACCTCCCCACAGCCATTGTCCTCTGAATAATAACAATAACAATAAATGGACAAATAAACTAGCGAGTAGCAAGCAGCACAGATAAAATTTGTTCATATAAATGGGGATAAGAGTAACGGGACCACATTCAGGCTTCGTTTGGTTGCAGGTGCATGTGAATTTGCAGCAAATAATTCAAAAAAAGAGGAACCGTTTTGTCAGATACAGCAACAGAGCTGGTAGGTTTTTTGGTCTCAGTAAGAATCCATCTGCTAGTGCAGCAGTGATTTCTGCAACGTCCTCAGCATCTGTGGGCGTTGGGGCTGCTCTGGAGGTGCAAGAAATACGGGAGAGATCCAACAAGTGGCAATGGAACCAGTACTCCATAAACTATTTCGTTTCACATTATCAACCTTCTCAACAGCAACATCAATCAAGTGTAGATCCTCCTGTCGTCCTTTTAGTTCATGGATTTGGAGCTTCTATTCCTCATTGGCGCAGGTTCATATTTTTCTCTCCAACTTATTTACTTTTAAACATTAAATAGATGTTATATATTTCTCACATATCTGGCACTCAATATTAAAGGATTGCTTTAAGTAGTGGCACCCAATTTAATCATTCTGAAGGGGACTATTTGTACATCGATAAAAGAAAAGAAAAAAGTGATTAAGGGGTTTGTCCCTAATGGACCAAGTGGTCTAATTTTTGGGTTGGCAGATGAGTCAAGAACAGGTTGTTGGTGGTGATTGTGTTCCAGAAGCTGACAGATTCTTTGAGCTCGATCAGAATGGGAATTCAATCCTTCATTTTCGTTTCTAGGCGAGGAGGATGTGGGGTCCAATCCTTCAATCGTTAATTACTCAGAAAATGAGTCTTGGCGACAAAGAATTTGGATGTTGAATTTGGAGCCTTTGTTAAATGAGGAGAGTGAGGCTTTTTAAATTTGTTGCTCGGACAGTAGTCTGAGTGAGGTTGTTGTGGCTAGTTGCTGGAAGTTCGTTGTTCGAATAAGCCTTTAAGAATAGTCAATGTTTCTTTTAAACAGCCGGTGTTGGGTACTTTTGGTCCTCCATCTATGGTGGTTGCGTTCCCTTCTTTGATCGTAGAGGTGCAATAGGAGTGTCCAATCGCTGAGGGTCTATATCATTCATTTATCAAGGGAAATTCTGTTGGGATGGCAAACCAGGTACGTTGTCCTTTTGTTCTTTATCCTTCCATGATGAGATTGGGTGGAGGGAGGGGGTTATCTTGTTCTGGTGACATGTTGTATTCTTCATCATTCCCTTTAGGCATGCCCTTTGGTGGGGTTAGTTGGGTTTTGCCCCCACCGCAATGTCTCTTGTGTTTGTTAACTCCTCTCCTATCCTTTTTCTGGAAGTGCCATGTTTCACCTGATCTTTGTCTTGTTTGGAGACCAAGTCTTCGCTTTTTTCTTCTTTCTCTTATGTCTTAAGTAGTGGGGCCAAGGGGGGTGGTCTTCCGTTTAGTGGTGGGCTGTGTGGGAGATCCTTTACTAATACCAACAGGAACCAGTACAACATTCCTCATGTGCATTGCCCAAAGTATTGATGGAGATGCATTCAAGAACCTGACCAAAAAGATTCGTTCCTTTTTTTTTTTTTAATACTAACATGCTAATCCCAAAATCATATTTGGCATGAAGAAGCGAGCATTTAGCAGATAGTGCATGAAGTCAACTCAAGTTTTTCAAGCCAAAAGAGTTATCTAAGATGAATAAAGATGAAGAAGAAACGGCTTCCAGACTAAGCTTCTATCGTGAAAAACTCATTGTTTGAAAGAATTGTTCAAAAGAAGGAAAGGGAAGAACTTCTTGCCCAAGCTACAACTACATAACTCCATATTTTCGAGAGAAACACCATCCAACATAAATGAAACCTTATAGAACAAATAAAAAAATGAAGAAAAGAGAACTCACTTGTGAATTGGGTCTAGAGAAAGAGATAAAAGGAAGCCAGCAGATGGAATGTTGTGCATTCTATATGTTTTCTCTCTTGGTAACCCATGGATTGTTGAACTGAAACAAGAACGAGGGTAACCATTTCTGACTAAATTGACTAAATTAGTTATTGATAATGTTACATAATTAATTTAAATTTTGATTGTTGGATTGTGAATCATTGATTAACTAATACTTAGTATCATCAAATTATAGTTAGCACTACTTTCAGATTCCAAATCTTNTAAATTTTCATTTCAAATCTTTTCTTTCTTCTTTCCTCTTTCCTTTTTTATTTACCTGTTAATTTTTTGTTCCGATTCTTCTCTTTTACTCTCCCCATAGTCCAATAAACTCTGGCGATTTGTTGTGCTATACGAGTGAAAACCTTTCGTCCGTGTAGTGGATTGTCATTGGATCGCTTTATTCACAGAGAAGCCCAGTGATCTTCTGGCTCATACATCAAACAGTCAGCATGCCTTTATTCAGAGATTTGTTGTTCTTGACATGCATGTCCCCAGGTCCTGATGTTTTATTTGGAGATTTCTTCAGGAATATTAGCGCATTGTCTCAATACTCGACTGTCTATGCCATCGACCTTCTTGGCTTTGGTGCATCTGATAAGCCTGCCGGCTTTGCATATACCATGGAAACATGGGCTGATGTATGTTTAAATGGAAGCTTCAATTTGGTATTTAGTTGTATTAGTTAATGACCAGTTATTGATCAACGGGAACTCGCTAATGTTGCCCCTTTCTTTGCTGACAGTTGATATTGGATTTTGTGAAAGACATCATTAAGAGACCAACTGTGCTAGTGGGTAACTCAGTGGGAAGCCTTGCTTGTGTGATTGCTGCTTCAGGTGTGTGAAGCCAACATTTACAAATACAAGTCTTTAGAAAGTAGTCTCAATTTGTGAAGGTGATATAGATATGTTTTCCTATGAGATCAGATTCTAGTCGCAATCTAGTTCGAGGACTTGTGCTCTTAAACTGTGCTGGTGGCATGAACAATAAAGCAATTGTTGACGATTGGAGGATCAAACTGTTATTACCTTTGCTTTGGCTGGTCGATTTCTTATTGAACCAACGGAGAATTGCTTCAGCTCTGTTTGAGCGTGTGAAGAAGAGGTATTGGTTTACTTATAGTCAACTCTTCCTTTTCATGTTGCTAAATGGAGGATAAAATTAGAGAAGGTATAATATTTCTCTGCAGAGATAGCTTGAGGAACATTTTGTCTTCCGTATATGGAAACAAGGAAAATGTGGATGAAGATCTGATAGATGTAGGCTTTCTTTCTTCCCAACTTACCTCTCTTCTTCCTCTGAGTAATGTTATTCTAATCTTGTTTGAACTGATAAATATAGATAATATTAGAACCAGCCAATGACGAAGGGGCACTTGATGCATTCGTTTCGATCGTAACGGGGCCACCAGGGCCGAGCCCTGTGCAACTAATGCCAAAAATTTCCGTGCCTGTTTTGATTTTATGGGGAGATGAAGATCCATTCACGCCACTTGATGGTCCTGTTGGGAAGTACTTCTCCAAGTTATCTATGGAAGCTCCAAATGTCAGTCTTTGTGTGTTGAAAGGCGTAGGACATTGCCCTCATGATGATAGGCCTGAATTAGTGCATGAAAAGCTCCTTCCATGGCTGGCTCAGCTTCATGCTTTATAACAAGTTTTTCCGCGTCCACAAGATCATATAGGTGTATCTCTGTTTGTATAGCCAAATCCCAGCTTTTTCTGCAACCAAGTTGGTTTATCATTCAAAATGTCAGTCATAGTTTGATATTATTTAATTGTTGTAAAGGGAAAAATTCGCAATTCTTAGGTCAAACAATTGCCAATGATTATGTCTTTTGTACCACATATTCTCACTAAATAGATGATTGCCTGTAATATAGTACCTTTGGCTTTGCATGTTTGTATATGGGCAAATGTAGTAT ATATCTCTCGCAAACTCTGTCTTCTGCAATAATTTCAATTTTTTTTTTTTTTTTCAAGTTTCAATCCATCTTCAGCAATGGTTTTTCCTCTCACAAGTGATATCATGGATTTTTTTGCATAGATTGATTGGGAGAGATGTGTGAGAGATGGAGAAGAAGAAAATCCAACATGATGGTAACACTAGAGTTTGAAGAGGAGAATTAAAATGTAATTTTCACCCTCAATGACACATGCAAAATCCTAGTTTTCTTCTTTTTCAAGTCGGAGGATATAAGGTTTTCCTTTGGGGTTGAGAAAAGTACGTTATTTTGCAACTTTTAAGGGTTTAAAGTCATTTTACTTGTAGATGATAGCAGAATTTCAGTTTTTTTTTTTTTAATTCTTTAAGGATTGGGTAAAAAATCTTTATCTATTCTAAATAAGGTTATTTTTAATAACTCTCATATCAAAACCTCCCCACAGCCATTGTCCTCTGAATAATAACAATAACAATAAATGGACAAATAAACTAGCGAGTAGCAAGCAGCACAGATAAAATTTGTTCATATAAATGGGGATAAGAGTAACGGGACCACATTCAGGCTTCGTTTGGTTGCAGGTGCATGTGAATTTGCAGCAAATAATTCAAAAAAAGAGGAACCGTTTTGTCAGATACAGCAACAGAGCTGGTAGGTTTTTTGGTCTCAGTAAGAATCCATCTGCTAGTGCAGCAGTGATTTCTGCAACGTCCTCAGCATCTGTGGGCGTTGGGGCTGCTCTGGAGGTGCAAGAAATACGGGAGAGATCCAACAAGTGGCAATGGAACCAGTACTCCATAAACTATTTCGTTTCACATTATCAACCTTCTCAACAGCAACATCAATCAAGTGTAGATCCTCCTGTCGTCCTTTTAGTTCATGGATTTGGAGCTTCTATTCCTCATTGGCGCAGGAATATTAGCGCATTGTCTCAATACTCGACTGTCTATGCCATCGACCTTCTTGGCTTTGGTGCATCTGATAAGCCTGCCGGCTTTGCATATACCATGGAAACATGGGCTGATTTGATATTGGATTTTGTGAAAGACATCATTAAGAGACCAACTGTGCTAGTGGGTAACTCAGTGGGAAGCCTTGCTTGTGTGATTGCTGCTTCAGATTCTAGTCGCAATCTAGTTCGAGGACTTGTGCTCTTAAACTGTGCTGGTGGCATGAACAATAAAGCAATTGTTGACGATTGGAGGATCAAACTGTTATTACCTTTGCTTTGGCTGGTCGATTTCTTATTGAACCAACGGAGAATTGCTTCAGCTCTGTTTGAGCGTGTGAAGAAGAGAGATAGCTTGAGGAACATTTTGTCTTCCGTATATGGAAACAAGGAAAATGTGGATGAAGATCTGATAGATATAATATTAGAACCAGCCAATGACGAAGGGGCACTTGATGCATTCGTTTCGATCGTAACGGGGCCACCAGGGCCGAGCCCTGTGCAACTAATGCCAAAAATTTCCGTGCCTGTTTTGATTTTATGGGGAGATGAAGATCCATTCACGCCACTTGATGGTCCTGTTGGGAAGTACTTCTCCAAGTTATCTATGGAAGCTCCAAATGTCAGTCTTTGTGTGTTGAAAGGCGTAGGACATTGCCCTCATGATGATAGGCCTGAATTAGTGCATGAAAAGCTCCTTCCATGGCTGGCTCAGCTTCATGCTTTATAACAAGTTTTTCCGCGTCCACAAGATCATATAGGTGTATCTCTGTTTGTATAGCCAAATCCCAGCTTTTTCTGCAACCAAGTTGGTTTATCATTCAAAATGTCAGTCATAGTTTGATATTATTTAATTGTTGTAAAGGGAAAAATTCGCAATTCTTAGGTCAAACAATTGCCAATGATTATGTCTTTTGTACCACATATTCTCACTAAATAGATGATTGCCTGTAATATAGTACCTTTGGCTTTGCATGTTTGTATATGGGCAAATGTAGTAT ATGGGGATAAGAGTAACGGGACCACATTCAGGCTTCGTTTGGTTGCAGGTGCATGTGAATTTGCAGCAAATAATTCAAAAAAAGAGGAACCGTTTTGTCAGATACAGCAACAGAGCTGGTAGGTTTTTTGGTCTCAGTAAGAATCCATCTGCTAGTGCAGCAGTGATTTCTGCAACGTCCTCAGCATCTGTGGGCGTTGGGGCTGCTCTGGAGGTGCAAGAAATACGGGAGAGATCCAACAAGTGGCAATGGAACCAGTACTCCATAAACTATTTCGTTTCACATTATCAACCTTCTCAACAGCAACATCAATCAAGTGTAGATCCTCCTGTCGTCCTTTTAGTTCATGGATTTGGAGCTTCTATTCCTCATTGGCGCAGGAATATTAGCGCATTGTCTCAATACTCGACTGTCTATGCCATCGACCTTCTTGGCTTTGGTGCATCTGATAAGCCTGCCGGCTTTGCATATACCATGGAAACATGGGCTGATTTGATATTGGATTTTGTGAAAGACATCATTAAGAGACCAACTGTGCTAGTGGGTAACTCAGTGGGAAGCCTTGCTTGTGTGATTGCTGCTTCAGATTCTAGTCGCAATCTAGTTCGAGGACTTGTGCTCTTAAACTGTGCTGGTGGCATGAACAATAAAGCAATTGTTGACGATTGGAGGATCAAACTGTTATTACCTTTGCTTTGGCTGGTCGATTTCTTATTGAACCAACGGAGAATTGCTTCAGCTCTGTTTGAGCGTGTGAAGAAGAGAGATAGCTTGAGGAACATTTTGTCTTCCGTATATGGAAACAAGGAAAATGTGGATGAAGATCTGATAGATATAATATTAGAACCAGCCAATGACGAAGGGGCACTTGATGCATTCGTTTCGATCGTAACGGGGCCACCAGGGCCGAGCCCTGTGCAACTAATGCCAAAAATTTCCGTGCCTGTTTTGATTTTATGGGGAGATGAAGATCCATTCACGCCACTTGATGGTCCTGTTGGGAAGTACTTCTCCAAGTTATCTATGGAAGCTCCAAATGTCAGTCTTTGTGTGTTGAAAGGCGTAGGACATTGCCCTCATGATGATAGGCCTGAATTAGTGCATGAAAAGCTCCTTCCATGGCTGGCTCAGCTTCATGCTTTATAA MGIRVTGPHSGFVWLQVHVNLQQIIQKKRNRFVRYSNRAGRFFGLSKNPSASAAVISATSSASVGVGAALEVQEIRERSNKWQWNQYSINYFVSHYQPSQQQHQSSVDPPVVLLVHGFGASIPHWRRNISALSQYSTVYAIDLLGFGASDKPAGFAYTMETWADLILDFVKDIIKRPTVLVGNSVGSLACVIAASDSSRNLVRGLVLLNCAGGMNNKAIVDDWRIKLLLPLLWLVDFLLNQRRIASALFERVKKRDSLRNILSSVYGNKENVDEDLIDIILEPANDEGALDAFVSIVTGPPGPSPVQLMPKISVPVLILWGDEDPFTPLDGPVGKYFSKLSMEAPNVSLCVLKGVGHCPHDDRPELVHEKLLPWLAQLHAL
BLAST of Cp4.1LG02g09790 vs. Swiss-Prot
Match: PPH_ARATH (Pheophytinase, chloroplastic OS=Arabidopsis thaliana GN=PPH PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.7e-21 Identity = 86/316 (27.22%), Postives = 145/316 (45.89%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. Swiss-Prot
Match: YUGF_BACSU (Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168) GN=yugF PE=3 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.0e-19 Identity = 79/290 (27.24%), Postives = 135/290 (46.55%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. Swiss-Prot
Match: DMPD_PSEUF (2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas sp. (strain CF600) GN=dmpD PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 5.2e-07 Identity = 38/114 (33.33%), Postives = 57/114 (50.00%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. Swiss-Prot
Match: AAMHY_RHILO (2-(acetamidomethylene)succinate hydrolase OS=Rhizobium loti (strain MAFF303099) GN=mlr6787 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 5.8e-06 Identity = 63/264 (23.86%), Postives = 109/264 (41.29%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. TrEMBL
Match: A0A0A0KAI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014690 PE=4 SV=1) HSP 1 Score: 628.2 bits (1619), Expect = 6.3e-177 Identity = 322/367 (87.74%), Postives = 333/367 (90.74%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. TrEMBL
Match: W9SYE2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014767 PE=4 SV=1) HSP 1 Score: 492.7 bits (1267), Expect = 4.1e-136 Identity = 254/389 (65.30%), Postives = 304/389 (78.15%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. TrEMBL
Match: A0A059BYG3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04110 PE=4 SV=1) HSP 1 Score: 487.6 bits (1254), Expect = 1.3e-134 Identity = 245/333 (73.57%), Postives = 277/333 (83.18%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. TrEMBL
Match: A9PIY6_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 2.3e-134 Identity = 241/330 (73.03%), Postives = 280/330 (84.85%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. TrEMBL
Match: U5FGX1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s09230g PE=4 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 3.0e-134 Identity = 247/364 (67.86%), Postives = 295/364 (81.04%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. TAIR10
Match: AT5G38520.2 (AT5G38520.2 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 443.7 bits (1140), Expect = 1.1e-124 Identity = 222/338 (65.68%), Postives = 276/338 (81.66%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. TAIR10
Match: AT5G19850.1 (AT5G19850.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 168.7 bits (426), Expect = 6.9e-42 Identity = 113/369 (30.62%), Postives = 179/369 (48.51%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. TAIR10
Match: AT4G36530.2 (AT4G36530.2 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 162.5 bits (410), Expect = 5.0e-40 Identity = 110/340 (32.35%), Postives = 176/340 (51.76%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. TAIR10
Match: AT5G13800.2 (AT5G13800.2 pheophytinase) HSP 1 Score: 104.0 bits (258), Expect = 2.1e-22 Identity = 86/316 (27.22%), Postives = 145/316 (45.89%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. TAIR10
Match: AT4G25290.1 (AT4G25290.1 DNA photolyases;DNA photolyases) HSP 1 Score: 100.1 bits (248), Expect = 3.0e-21 Identity = 97/340 (28.53%), Postives = 150/340 (44.12%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. NCBI nr
Match: gi|659126283|ref|XP_008463103.1| (PREDICTED: pheophytinase, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 656.8 bits (1693), Expect = 2.4e-185 Identity = 331/380 (87.11%), Postives = 348/380 (91.58%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. NCBI nr
Match: gi|659126281|ref|XP_008463102.1| (PREDICTED: pheophytinase, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 629.8 bits (1623), Expect = 3.1e-177 Identity = 320/367 (87.19%), Postives = 336/367 (91.55%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. NCBI nr
Match: gi|449441232|ref|XP_004138386.1| (PREDICTED: pheophytinase, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 628.2 bits (1619), Expect = 9.1e-177 Identity = 322/367 (87.74%), Postives = 333/367 (90.74%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. NCBI nr
Match: gi|1009151430|ref|XP_015893548.1| (PREDICTED: uncharacterized hydrolase YugF-like [Ziziphus jujuba]) HSP 1 Score: 511.5 bits (1316), Expect = 1.2e-141 Identity = 263/385 (68.31%), Postives = 304/385 (78.96%), Query Frame = 1
BLAST of Cp4.1LG02g09790 vs. NCBI nr
Match: gi|1021572449|ref|XP_016177334.1| (PREDICTED: uncharacterized hydrolase YugF [Arachis ipaensis]) HSP 1 Score: 501.5 bits (1290), Expect = 1.3e-138 Identity = 250/353 (70.82%), Postives = 292/353 (82.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|