Cp4.1LG02g08970 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g08970
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Uracil-DNA glycosylase
Location	Cp4.1LG02 : 6309188 .. 6316355 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGACGCATATCCCATAGGCTACGATCAAATTTCAAACAAGCGGGGAGAGTGGAAAGCTTTTAGCGGATTCTCTGTTGGTTCCCGCCATTAAAGCCTGCTCCACCTCCACTCTACCGGAGCAACCAGACCCAAAATGGCTTCCTTCTCGCCTTCACTTAAATCCAAAACCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACCTCACAGACGCTGAAAACCCTTGCAACCACGGACGACAAATGCGATTCAGAGCTCACATTGGCTTCCTCTTCGATGGACATCTCTTCCTCTCAGAAATCCCGCATGGAAACCAACAAATGGTTGGCCAGATCGAAGCGCAATCTCAAAATTTCCTCAGATAGGGTTTCCAAATGGGAGAATGGATGTGTGAAGTTGGAGGAGCTTTTGGTGGACGAGACATGGTTCGAAGCCCTTCCCGGAGAGTTTGAGAAGCCCTATGCTCTTAACCTCTGCAAGTTCGTAGAGACGGAGATTTGCAGCAGCGGTGTCCCTGTTTATCCTCCTCCCTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTCGATAGGGTGAAAGTTGTTATTCTCGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCTTTTTCTGTTCCTGAAGGAGTTAAAATCCCATCAAGTCTTCTCAACATATTCAAGGAACTGAGGGAAGATCTTGGTTGTTCCATTCCATCCCACGGAAATCTCGAGAAATGGGCTGTTCAGGTGCTGTTGTCTCTCATCTCTTTATTCTAAATACTTAGAAATGCATACTTAGATGTAGCTACTTCTAATGTGTTGGGGCTACAGAAATGCTACCCATAAAGATCTTGCTTATTTTTCATTAGATGAAAGATATGTAAATATAGGTTTGGGGTAGATGGATTATATAATAGATATGGTTCATCACAAGGTTCGGATTTTGGTGACTGCTAAGGGAATGAAAAAATATTTTCTGAAATCGGGTGCCTTTTCTTGAATTAAGAACACAAAGATAACTAATAAGCTATGCTGGTTTCAAAATATATATTTTTTAAAGTCATTAATTCAAGTTGGAAATTTGGGTTGTAATTAGGTGACTTCTCTAAGTTGAGAGATTGGATCATACAATTAGTAATTCATATTGGCAAAGGATTCTAAATGAAGTTTTTCATGACATTACTCGTATGAATCTGGGCTTGTTTGGCTTCAAAGGATAAGTTGATCAATTCGGGAGAACTTTTCTGCGTGGAAAAATGCATGAGTAGTTATTGTGATCTGAAAAAATTATTGTGTAAGAATGTAGTCAGAGTTCTATCTAGTGTCTTTTTCACTATTATGTTGTCTAAAATGATTTTTATATACATTGTAGGGAGTCTTGTTGCTTAATGCTGTTCTCACAGGTAATAATCTTCTTTTCACCTTAAGTTCCATACCTTCTTTATCAATGTACTTCCATTTCTAAAATCAGTAAAGTGAAGTTGAGGTAATATGTATAACGCCTTGTTATGTTCTTTGTGATTGTTTTTAAACAAATATTTCATTGATGAGTTTTGCTTTTGACCATCTAAAAAATTTTTCAATAGCTACCAGCTTAAAAGATACTAGCTAACTTTAATGCCATCGGCAACATCTATGACATCAAACCAAAAACTCATCAAACATCACCAAACCGTCACAAAGAGCAACTGCGCTAATATATAGCCATTTCCAGCAGCTAACTGTTCAAGCCGAGATTAGCTACAACTAAAGAAAAATTATAATCTTTCCAAGTTTGCTCATAAACTGCCACCTTATCCTGGGAGAAAAAACAGCAAAAGGCCTCCAAATGGGTGATCTTCGACAACAGGCTTTATAAAGTAACAACCTAACATTGCTGCAATGGAAGCCCTTGGGGAACAAGTTAACAAACACTCCAGCCCCTCAAAACATCCATTATAAAAAGCCAATAACATCAGACTCAAAGACGAGGCCAAAGCGCCCTTTTGAAGATTGATAATCAAACCAAAAAGAACCGAAAACACAAGACGTCGATAGACACTCAGAAGGAATCCACTGCTAGAATCAACACTTTAAAGGATGTAGTTTCTTGTTTGTTCCCATACATTAATAAGAGTTTTACATTATTTTGCTTTTAGTAACTATACATGCTTTCCTGCATTTACTTATTGATAAATACTTTGGGTTTTCCTGTTTAGTTCGAAAGCATCAAGCCAACTCTCATGCTAAAAAAGGATGGGAACAATTCACCGATGCTGTCATCCAAACAATATCACAAAAGAAGGAAGGAGTTGTCTTTCTCCTTTGGGGGAACTCTGCTCAAGCGAAATTGAGGTACTTCTATTGTATGATATTAGTTCTAGCAGGGAGTGCATGACTCTGGAAAGGACCAAAGTAATAATCGAATCATGGTTAAAATATAAACAACGACCTTTTAATTTTTCTTGTTGAAAAAAGAAAATCAGTGACCTTGAGGTTAAAGTTTTTTCTTCTATGTAAATTTCATCTATTGATCAGAATCTGGCATTACAAATTTAATTGGGAACAGGAAATAAAAACCAAGAACTTTCAGTTGAAGACTTGATGTATTTTAATAGATGAAGTGATGTAGGATGAAATATTAGATAATTACTATAATTTAGTTAATATTAGTCTAGTTGACATGGTACTCTATGAACTTGCCTTGGAGTTCGCCGGACACAAGTTTTAACACCTATGCATCAAGTTGGATCAGCGGCGAAGGTTTGAATGGATTTACCTTGGTTAAAGGCCAAGAGTTAAGCGCACTAGTTCCTATCTCAAGGCTAAAACACTCCAGAAGTTTGGTGACCAACCAAGCTTGAATGCCTCAAAACATGCGATCCTAAACACAAGTCTTCAACTTCAATCTGTTGAAACAAGAGGACCACTTGGGTTTATATAGCCAAGGAGTCCAAAAACCAACCTAGATTCTCTAAGTAATATAATTTTATTTAGAATAACCAACCTATTCTAGAAACCTTAAAAGGAATACAAGTTCAAAAATCTTCTAAAAATTCTCCTAAAATATCCTTCTAGAAACATTGTAGGAGTGAGACTAAGTAATGAAGGTTGAACATGTGTTTTTGGCCTGCTTGGTCGATAGCGTGTGTATAGTGAACTCCAAGAGAAGTTCATAAAGCACTATAGCACTAGCTGTTAACTTTTAGATTAACTAGTATTTGATTAATATTTTAGATTTGATTCGTTGCTTGTTAATTTTATTGTAAGGATATAAATATCCACTGTTTAGGATTATAAAAAAACTTTTGAATATTATTTGAAACATGACTTTTTTAAGAAGAAAATAGAACTTTGTTTTTAGAGAGTGTTCTCTCAACTTTTAGGATGAATTTTCCTTGCTTGGCCATAATTTAGCTGTTAGGTACCTATAGAACTTTGTTCTTAAAGAGTGTTCTCTCAACTTTTGAGTGAATTTTCTTTGTTTGGCCATGTTTAGCTGTTAGGTACCCAAACACTGAAAATACACAGAAACTCAAAGATAACACAAGATAGTAATATATTGCAATATTCAAATAAGTCGCAATGTAACAATAGCTTTTAGGGCTATCTCTCTTCCAATGTCCTACAATGGATAATCCCACTCAAATTGATCCCCTTTTAAAACCTCAACTCCCTTTGCTCTTAACCAAGATCCCCTGGATAATTACCACTATACCCCTTACTAATACGCTACTAATATTCTCAATATATACCCTTCCTAGTACTCTCACATCAGCCTAATCTCAAATCCATTACATCAATTGATACGAGAGCCCTTGGAGGTTCTTGGAAAGGTACAAAACTATATACAGTGGTCGAAGATGGCAACATCAACAGTTGACTCCTAGAATTTGTTTCGTCGTCTGGGTATTTACCACCACCATATTTATCTTCATCACTTCCATATTCATCAATCCACTATCATCATACCACATCCAAACATTCCGAACCATCCAAACCAATGTTTCAGCAAACAAAAAACAAGAAACGCCACACTTTCTCAACTAATTTCATAGTCAACTTCGACAACTTTGCAAAGATTAGATGCTCTTGTGTACCATTAAAGAATTCCCTCCAAATCAGCCTAACTAACTACAAGGGCAGAGACAAAGCAAATGATAGTGATGTAGAAGTCGATTACATTATTAAAGAAGTTGAAGAAGACGATGCTGTTATAATAATCAAAGCTAAAGATAAAGACATCGAAAAACACAAGGAAGATGATGAGGAAGTCAGAAAGGACAAGGATTAAAAGAGGAAGTCAAAAAAGAAGAGGAAAATGAAGGTGACTTGATGTCGGACAAGAACATACGATGCTACATGTTGCAACATTGTTAGAGGAAATAACCTTTGTTGTTGGGCTTTGTAAGAGAGATTTGTTTTGATCGCCATGGAATTGTTGAGTGCTACAATTTAGTTAGTGGCTGTTGGTTCATCAGAGGTGACCAATTTGTCAGAGCTTGATGTTGTCAGACAAGGACATAAGATGCTAGATGTTGTGGCATTGTTGGAGGGGGAAGATTTTGCTGCTACAGCTTTTTCAATGGGTTTATTTTGAACATTGCATCTTCATAGGAGGATGCTGGTTTGTCGGAAAGGAACGTTTACGGCGCCACAATGTCATCTGAGGGGCACATTGCAACGCAGAAAAAAAAGGAAAGAAAGAAAGTGGAGACATTGTGGCGCTGATGCAAAGAAATGTGAAAACAGAACGTGCTTCGTATTTTTGTTAATCCTAAACTTACGTGAGACCATATTGACTATAGCATTGAGCCCATTAGTTGGTCACTGGAAGCCTAATTTCCACTTCATTTTCGTGAGATTTTCATGGAGTATTATTTAATTCCAATCTCAATCCAGAAAAAATTTGCACCAAGATTTTTCAATTGGAGTTTACCACACTCAAAAGAGCAGAGGAGAGTTTTCATTTTTGTTACCTCAAACTTGAGGATAGGTCCTTTTTCTACGTTGGGTGATGTTAGTTACTCAATATAACTTGGTTAATATTACTTTAGTTGTTAAGTTAACTTTAGACTAATTAGTTTTAAATTAGTATTTTGCATTTAACTCGTTTGTGTTAATTGTATTGCAAGCCTATAAGTAGCCACCTTTTAGGATTGTGAGGAAACTCTTGAATATTATTTTGAAATAGAACTTTAACTTTAGTGTTCTCTCAACTAAAGGAATGGATTTCTCTTGTTTGGCCTTGGATGGGACCTAATCACAAATTCTGTGCATCATAAGAACAGTAGGGTCAGGAGTAATAAAACTTTGTAATTCCTGCATGCTATTAGGAGTGTTTGTTTTTAGCTGATTTGTGGTTTCGTTGGTTCATTAGCGGGAGTAAGACTCTTGGGTTCATTGGCCAGAGTAAGACTCGTGTGCATCTTTTTCTTTGTTCAGCAGCACATAGGTTCTTGCTTTCCTCCGTGAACTCTAAGACCTTCAGGCATGCGTGTCTCTGTGTGTGTTTTACCTCTCTAATATGACTTTCACCCTCTTGAATTTGGATTATTTCCCACAACCATCGCCCCTATTCCACAGCCTGGAGTGCTGTTCTCATCTGATAATTTTTCTTCTATCTAAGTGCTGCAAGTTTACTCATCATTTCTTCTAAAATGTTCTGCAATGTCAGCATATTCTCCTAGACTCTGAATCCTCAAGTTTGAATTGCTTTAATACCAATTTGATTGGATTGTTATGGTAGAAATTAATGAAAGCTACTACCAAATTAGAAAGGAAAATTAATTTGAGAGGCTAACCACTCAACTTTGACGAACTTATTAAGTTACTATGTATATGCCACTGGTAATATTCCTTATATTGCTCAATTGCATTTCATATTAATAACTCACATATCCCATGCAAATATAAACGCCACACCCACATTTTAGGGGATGTGTGGTAAATACTTTACTTTAGTCGTCATTTGGTACATGTCTTGCTATGCTGGCTCTAAGCTTACAAGTATAGGAACTTTTCCTGTGATGAACAGGAAACTATTTGAGAAAACATGGTTTTGCTGAGCTTTAAAATCAGCATAGTGCAATTTTCATTTACTTTATCTAGCCTAGAACAGCTTAGGTTCTATTGTCTTGATAATTAACTTACAAGAGCATCATCAGAGGGGTTTAATTCCTCTTCTTTCTTGGCAATAGCGTCCTACTTCACATAGAATCTGATGTATGAACAGGTTAATTGATGAGAAAAAACATCACATTCTCAAAGCCGCGCATCCTTCTGGTTTGTCGGCCAACAGAGGCTTCTTTGGTTGCAGGTTAGTTCCATTGTTTAATTCCATTATAAATTTTTTAAACTTTCCAGTTCAAATATTAATTGGAATTTGCTCACACCTTTGTACTTCATCATTTCCCTTCAATATGGTTCTTACAATAACAACATTTGCTATATGCCACTTGGTATTTTGTGTATATACAGAACACTTGGTTCTCTGCCTTTTTTCTCTCTCAAAGACTTGAAAACACTTAAGGAACATAGATGTTTATGGATAAGAGAGAAAATGCTTCAAGTGATTCACTAATATGAGGCAAAGTTGATGGATGCCTTTTCATTTCCCTTGGAATGTTTTCTCATCAAGATTGTTTACTGCCCATTGTTGATTTTCTACAGGCATTTTTCTCGAACAAACATGCTTCTCAAGGAACTGGGTATTGGCGCCATAGATTGGCAACTCTGATCAAAATACTTGCTTGAACCATTGCAGTTAATTTTGTGGCTCCACAGTCTGCTGGATTGACGATTTTTGTGGAATTTTCACTTGTTGATTCATCATTGTTTAAATGATGAGATGCCCATCCTTTCCCATTTTTGTATTATAGTGTTTATACTTGTAGTTAGATTTGATCCCAAAGCAGCAAAACCCTTCTTTATGAATTAGGGTAAAATTAGAAGAAAGTTGGGCTAAATGTGTCTTGGTAGCAAATGTTTGGGTGTTCTTTCAACTCTATTGTTTAAAAGATTTTCTTTTAGCCCCCTTGTGCCTTTAGACTTGTTATCGATGAATGTTCAAATGAATTGTATAATACTTAGTAAGTTAATATAAGTTTAAAGGAGAAATTAGGTCCTTCAATAATTAAAATAGATGATATTTCTACGATTA

mRNA sequence

AGTGACGCATATCCCATAGGCTACGATCAAATTTCAAACAAGCGGGGAGAGTGGAAAGCTTTTAGCGGATTCTCTGTTGGTTCCCGCCATTAAAGCCTGCTCCACCTCCACTCTACCGGAGCAACCAGACCCAAAATGGCTTCCTTCTCGCCTTCACTTAAATCCAAAACCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACCTCACAGACGCTGAAAACCCTTGCAACCACGGACGACAAATGCGATTCAGAGCTCACATTGGCTTCCTCTTCGATGGACATCTCTTCCTCTCAGAAATCCCGCATGGAAACCAACAAATGGTTGGCCAGATCGAAGCGCAATCTCAAAATTTCCTCAGATAGGGTTTCCAAATGGGAGAATGGATGTGTGAAGTTGGAGGAGCTTTTGGTGGACGAGACATGGTTCGAAGCCCTTCCCGGAGAGTTTGAGAAGCCCTATGCTCTTAACCTCTGCAAGTTCGTAGAGACGGAGATTTGCAGCAGCGGTGTCCCTGTTTATCCTCCTCCCTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTCGATAGGGTGAAAGTTGTTATTCTCGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCTTTTTCTGTTCCTGAAGGAGTTAAAATCCCATCAAGTCTTCTCAACATATTCAAGGAACTGAGGGAAGATCTTGGTTGTTCCATTCCATCCCACGGAAATCTCGAGAAATGGGCTGTTCAGGGAGTCTTGTTGCTTAATGCTGTTCTCACAGTTCGAAAGCATCAAGCCAACTCTCATGCTAAAAAAGGATGGGAACAATTCACCGATGCTGTCATCCAAACAATATCACAAAAGAAGGAAGGAGTTGTCTTTCTCCTTTGGGGGAACTCTGCTCAAGCGAAATTGAGGTTAATTGATGAGAAAAAACATCACATTCTCAAAGCCGCGCATCCTTCTGGTTTGTCGGCCAACAGAGGCTTCTTTGGTTGCAGGCATTTTTCTCGAACAAACATGCTTCTCAAGGAACTGGGTATTGGCGCCATAGATTGGCAACTCTGATCAAAATACTTGCTTGAACCATTGCAGTTAATTTTGTGGCTCCACAGTCTGCTGGATTGACGATTTTTGTGGAATTTTCACTTGTTGATTCATCATTGTTTAAATGATGAGATGCCCATCCTTTCCCATTTTTGTATTATAGTGTTTATACTTGTAGTTAGATTTGATCCCAAAGCAGCAAAACCCTTCTTTATGAATTAGGGTAAAATTAGAAGAAAGTTGGGCTAAATGTGTCTTGGTAGCAAATGTTTGGGTGTTCTTTCAACTCTATTGTTTAAAAGATTTTCTTTTAGCCCCCTTGTGCCTTTAGACTTGTTATCGATGAATGTTCAAATGAATTGTATAATACTTAGTAAGTTAATATAAGTTTAAAGGAGAAATTAGGTCCTTCAATAATTAAAATAGATGATATTTCTACGATTA

Coding sequence (CDS)

ATGGCTTCCTTCTCGCCTTCACTTAAATCCAAAACCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACCTCACAGACGCTGAAAACCCTTGCAACCACGGACGACAAATGCGATTCAGAGCTCACATTGGCTTCCTCTTCGATGGACATCTCTTCCTCTCAGAAATCCCGCATGGAAACCAACAAATGGTTGGCCAGATCGAAGCGCAATCTCAAAATTTCCTCAGATAGGGTTTCCAAATGGGAGAATGGATGTGTGAAGTTGGAGGAGCTTTTGGTGGACGAGACATGGTTCGAAGCCCTTCCCGGAGAGTTTGAGAAGCCCTATGCTCTTAACCTCTGCAAGTTCGTAGAGACGGAGATTTGCAGCAGCGGTGTCCCTGTTTATCCTCCTCCCTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTCGATAGGGTGAAAGTTGTTATTCTCGGTCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCTTTTTCTGTTCCTGAAGGAGTTAAAATCCCATCAAGTCTTCTCAACATATTCAAGGAACTGAGGGAAGATCTTGGTTGTTCCATTCCATCCCACGGAAATCTCGAGAAATGGGCTGTTCAGGGAGTCTTGTTGCTTAATGCTGTTCTCACAGTTCGAAAGCATCAAGCCAACTCTCATGCTAAAAAAGGATGGGAACAATTCACCGATGCTGTCATCCAAACAATATCACAAAAGAAGGAAGGAGTTGTCTTTCTCCTTTGGGGGAACTCTGCTCAAGCGAAATTGAGGTTAATTGATGAGAAAAAACATCACATTCTCAAAGCCGCGCATCCTTCTGGTTTGTCGGCCAACAGAGGCTTCTTTGGTTGCAGGCATTTTTCTCGAACAAACATGCTTCTCAAGGAACTGGGTATTGGCGCCATAGATTGGCAACTCTGA

Protein sequence

MASFSPSLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDDKCDSELTLASSSMDISSSQKSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFEKPYALNLCKFVETEICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFSRTNMLLKELGIGAIDWQL

Homology

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BLAST of Cp4.1LG02g08970 vs. Swiss-Prot
Match: UNG_ARATH (Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana GN=UNG PE=1 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.4e-109
Identity = 210/329 (63.83%), Postives = 245/329 (74.47%), Query Frame = 1


Query: 10  SKTRTLIDIFQPALSKRLKTSQT---------------LKTLATTDDKCDSELTLASSSM 69
           S  +TL+D FQPA  KRLK S +               L ++A +  +     ++A  S 
Sbjct: 4   STPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDSS 63

Query: 70  DISSSQKSRMETNKWLARSKRNLKISSDRVSKW--ENGC-VKLEELLVDETWFEALPGEF 129
            ++  Q +R E NK++A+SKRNL + S+RV+K   E  C V L ELLV+E+W +ALPGEF
Sbjct: 64  GLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGEF 123

Query: 130 EKPYALNLCKFVETEIC--SSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQA 189
            KPYA +L  F+E EI   S    +YPP  LIFNALN+TPFDRVK VI+GQDPYHGPGQA
Sbjct: 124 HKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQA 183

Query: 190 MGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQA 249
           MGLSFSVPEG K+PSSLLNIFKEL +D+GCSIP HGNL+KWAVQGVLLLNAVLTVR  Q 
Sbjct: 184 MGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQP 243

Query: 250 NSHAKKGWEQFTDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSA 309
           NSHAKKGWEQFTDAVIQ+ISQ+KEGVVFLLWG  AQ K +LID  KHHIL AAHPSGLSA
Sbjct: 244 NSHAKKGWEQFTDAVIQSISQQKEGVVFLLWGRYAQEKSKLIDATKHHILTAAHPSGLSA 303

Query: 310 NRGFFGCRHFSRTNMLLKELGIGAIDWQL 319
           NRGFF CRHFSR N LL+E+GI  IDWQL
Sbjct: 304 NRGFFDCRHFSRANQLLEEMGIPPIDWQL 330

[Close]

BLAST of Cp4.1LG02g08970 vs. Swiss-Prot
Match: UNG_PSEPK (Uracil-DNA glycosylase OS=Pseudomonas putida (strain KT2440) GN=ung PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.1e-73
Identity = 132/224 (58.93%), Postives = 162/224 (72.32%), Query Frame = 1


Query: 95  EELLVDETWFEALPGEFEKPYALNLCKFVETEICSSGVPVYPPPSLIFNALNSTPFDRVK 154
           + + ++ +W  AL GEF++PY   L +F+  E  ++G  +YPP  LIFNALNSTP D+VK
Sbjct: 5   DRIKLEPSWKAALRGEFDQPYMHQLREFLRGEY-AAGKEIYPPGPLIFNALNSTPLDQVK 64

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQG 214
           VVILGQDPYHGPGQA GL FSV  GV  P SL+NI+KEL+ DL   IPSHG L+ WA QG
Sbjct: 65  VVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIPSHGYLQSWAEQG 124

Query: 215 VLLLNAVLTVRKHQANSHAKKGWEQFTDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEK 274
           VLLLN  +TV +  A SHAKKGWE FTD +IQ +S++   VVFLLWG  AQ+K +LID  
Sbjct: 125 VLLLNTTMTVERANAASHAKKGWELFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLIDGT 184

Query: 275 KHHILKAAHPSGLSANRGFFGCRHFSRTNMLLKELGIGAIDWQL 319
           KH +LK+ HPS LSA RGF GC HFSR N  L++ G+G IDW L
Sbjct: 185 KHLVLKSVHPSPLSAYRGFIGCGHFSRANSFLEQRGLGPIDWAL 227

[Close]

BLAST of Cp4.1LG02g08970 vs. Swiss-Prot
Match: UNG_PSEP1 (Uracil-DNA glycosylase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ung PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.5e-73
Identity = 132/224 (58.93%), Postives = 162/224 (72.32%), Query Frame = 1


Query: 95  EELLVDETWFEALPGEFEKPYALNLCKFVETEICSSGVPVYPPPSLIFNALNSTPFDRVK 154
           + + ++ +W  AL GEF++PY   L +F+  E  ++G  +YPP  LIFNALNSTP  +VK
Sbjct: 5   DRIKLEPSWKAALRGEFDQPYMHQLREFLRGEY-AAGKEIYPPGPLIFNALNSTPLGQVK 64

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQG 214
           VVILGQDPYHGPGQA GL FSV  GV  P SL+NI+KEL+ DL   IPSHG L+ WA QG
Sbjct: 65  VVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIPSHGYLQSWAEQG 124

Query: 215 VLLLNAVLTVRKHQANSHAKKGWEQFTDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEK 274
           VLLLN  +TV +  A SHAKKGWE FTD +IQ +S++   VVFLLWG  AQ+K +LID  
Sbjct: 125 VLLLNTTMTVERANAASHAKKGWELFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLIDGT 184

Query: 275 KHHILKAAHPSGLSANRGFFGCRHFSRTNMLLKELGIGAIDWQL 319
           KH +LK+ HPS LSA RGF GC HFSRTN  L++ G+G IDW L
Sbjct: 185 KHLVLKSVHPSPLSAYRGFIGCGHFSRTNSFLEQRGLGPIDWAL 227

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BLAST of Cp4.1LG02g08970 vs. Swiss-Prot
Match: UNG_AZOVD (Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ung PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.6e-73
Identity = 131/224 (58.48%), Postives = 164/224 (73.21%), Query Frame = 1


Query: 95  EELLVDETWFEALPGEFEKPYALNLCKFVETEICSSGVPVYPPPSLIFNALNSTPFDRVK 154
           + + ++ +W EAL  EFEKPY   L  F+  E  ++G  +YPP SLIFNAL+STP D+VK
Sbjct: 6   DRVRLEASWKEALHDEFEKPYMQELSDFLRREK-AAGKEIYPPGSLIFNALDSTPLDQVK 65

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQG 214
           VVI+GQDPYHGPGQA GL FSV  GV +P SL NIFKEL+ DL   IP HG+L++WA QG
Sbjct: 66  VVIIGQDPYHGPGQAHGLCFSVQPGVPVPPSLQNIFKELKRDLNIDIPKHGHLQRWAEQG 125

Query: 215 VLLLNAVLTVRKHQANSHAKKGWEQFTDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEK 274
           VLLLN  LTV +  A SHA  GW++FTD VI+ +SQ++E VVF+LWG+ AQ+K RLID  
Sbjct: 126 VLLLNTSLTVERGNAGSHAGMGWQRFTDRVIEVVSQRREHVVFMLWGSHAQSKRRLIDSS 185

Query: 275 KHHILKAAHPSGLSANRGFFGCRHFSRTNMLLKELGIGAIDWQL 319
           KH +L +AHPS LSA+RGF G  HFSR N  L++ G+  IDW L
Sbjct: 186 KHLVLCSAHPSPLSAHRGFIGNGHFSRANQFLEQHGLTPIDWHL 228

[Close]

BLAST of Cp4.1LG02g08970 vs. Swiss-Prot
Match: UNG_PSEPG (Uracil-DNA glycosylase OS=Pseudomonas putida (strain GB-1) GN=ung PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-71
Identity = 131/224 (58.48%), Postives = 161/224 (71.88%), Query Frame = 1


Query: 95  EELLVDETWFEALPGEFEKPYALNLCKFVETEICSSGVPVYPPPSLIFNALNSTPFDRVK 154
           + + ++ +W  AL GEF++PY   L +F+  E  ++G  +YPP  LIFNALNSTP D+VK
Sbjct: 5   DRIKLEPSWKAALRGEFDQPYMHQLREFLRGEY-AAGKEIYPPGPLIFNALNSTPLDQVK 64

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQG 214
           VVILGQDPYHGPGQA GL FSV  GV  P SL+NI+KEL+ DL   I SHG L+ WA QG
Sbjct: 65  VVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIASHGYLQSWAEQG 124

Query: 215 VLLLNAVLTVRKHQANSHAKKGWEQFTDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEK 274
           VLLLN  +TV +  A SHAKKGWE FTD VIQ +S++   VVFLLWG  AQ+K +LID  
Sbjct: 125 VLLLNTTMTVERANAASHAKKGWEFFTDRVIQVVSEQCPNVVFLLWGAHAQSKQKLIDGT 184

Query: 275 KHHILKAAHPSGLSANRGFFGCRHFSRTNMLLKELGIGAIDWQL 319
           KH +LK+ HPS LSA RGF GC HFSRTN  L++ G+  I+W L
Sbjct: 185 KHLVLKSVHPSPLSAYRGFLGCGHFSRTNSFLEQRGMAPINWAL 227

[Close]

BLAST of Cp4.1LG02g08970 vs. TrEMBL
Match: A0A0A0KMG3_CUCSA (Uracil-DNA glycosylase OS=Cucumis sativus GN=Csa_5G289610 PE=3 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 2.2e-167
Identity = 291/318 (91.51%), Postives = 307/318 (96.54%), Query Frame = 1


Query: 1   MASFSPSLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDDKCDSELTLASSSMDISSSQ 60
           MAS S SL SKTRTLIDIFQPALSKRLKTSQTLKTLAT DDKCDS+LTLASSS DIS+SQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFEKPYALNLC 120
            SRMETNKW+ARSKRNLK  SDRVSKWENGCVKLEELLV+ETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVETEICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVP+YPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240
           KIPSSLLNIFKELR+DLGCSIPSHGNL KWAVQGVLLLNAVL+VRKHQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240

Query: 241 TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVI+TISQKKEG++FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNMLLKELGIGAIDWQL 319
           RTN+LLKE+G  +IDWQL
Sbjct: 301 RTNILLKEMGTASIDWQL 318

[Close]

BLAST of Cp4.1LG02g08970 vs. TrEMBL
Match: M5XNR7_PRUPE (Uracil-DNA glycosylase OS=Prunus persica GN=PRUPE_ppa022483mg PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 6.8e-124
Identity = 228/314 (72.61%), Postives = 255/314 (81.21%), Query Frame = 1


Query: 9   KSKTRTLIDIFQPALS--KRLKTSQTLKTLATTDDKCDSELTLASSSMDISSSQKSRMET 68
           K+K +TL+D+FQP  S  KRLKT     T + +           SSS D+++ QKSRME 
Sbjct: 4   KNKNKTLLDLFQPTASSAKRLKTDSIRATHSDSVSPVPPPSHDDSSSSDLTAQQKSRMEF 63

Query: 69  NKWLARSKRNLKISSDRVSKWENGC--VKLEELLVDETWFEALPGEFEKPYALNLCKFVE 128
            K LA+++RNL I S+R+S   +    VKLEELLV+ETW EA P E +KPYA  L KFVE
Sbjct: 64  QKLLAKARRNLSICSNRLSNSNSKGEGVKLEELLVEETWLEAFPSELQKPYAKTLSKFVE 123

Query: 129 TEICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPS 188
            EIC   +P+YPP  LIFNALNSTPFDRVK VILGQDPYHGPGQAMGLSFSVPEGVK+PS
Sbjct: 124 NEICGGALPIYPPTHLIFNALNSTPFDRVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPS 183

Query: 189 SLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAV 248
           SL+NIFKEL +DLGCSIPSHGNLEKWAVQGVLLLNAVLTVR HQANSHAKKGWEQFTDAV
Sbjct: 184 SLVNIFKELHQDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRNHQANSHAKKGWEQFTDAV 243

Query: 249 IQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFSRTNM 308
           I+TISQK+EGVVFLLWGNSAQ K +LIDE KHHILKAAHPSGLSANRGFFGCRHFSRTN 
Sbjct: 244 IKTISQKREGVVFLLWGNSAQQKSKLIDESKHHILKAAHPSGLSANRGFFGCRHFSRTNQ 303

Query: 309 LLKELGIGAIDWQL 319
           LL+E+GI  IDWQL
Sbjct: 304 LLEEMGIPPIDWQL 317

[Close]

BLAST of Cp4.1LG02g08970 vs. TrEMBL
Match: W9RJ98_9ROSA (Uracil-DNA glycosylase OS=Morus notabilis GN=L484_009862 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 6.8e-124
Identity = 235/329 (71.43%), Postives = 268/329 (81.46%), Query Frame = 1


Query: 8   LKSKTRTLIDIFQPAL---SKRLKTSQTLKTLATTDDKCDSELTLASSSMD--------- 67
           + SK +TL D F P     +KRLK     +TL++T++KCD+   + + S           
Sbjct: 1   MASKAKTLTDFFPPLQQPSAKRLK-----QTLSSTNNKCDANGIIPNRSSSSSGIGDGGA 60

Query: 68  --ISSSQKSRMETNKWLARSKRNLKISSDRVS--KWENGC--VKLEELLVDETWFEALPG 127
             +S+ QKSRME  K LA+S+RNLKI S RVS  + E GC  VKLEELLV+E+W EALPG
Sbjct: 61  DGLSADQKSRMEFQKVLAKSRRNLKICSQRVSNSQSEGGCGYVKLEELLVEESWLEALPG 120

Query: 128 EFEKPYALNLCKFVETEICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQA 187
           EF+KPYA NL KF+E+E  + GV VYPP  LIFNALNSTPFDRVK VILGQDPYHG GQA
Sbjct: 121 EFQKPYAKNLSKFLESETSAVGVTVYPPSHLIFNALNSTPFDRVKAVILGQDPYHGLGQA 180

Query: 188 MGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQA 247
           MGLSFSVPEGVK+PSSL+NIFKEL++D+GCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQA
Sbjct: 181 MGLSFSVPEGVKVPSSLVNIFKELKQDVGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQA 240

Query: 248 NSHAKKGWEQFTDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSA 307
           NSHAKKGWEQFTDAVI+TISQ+KEGVVFLLWGNSAQ K RLIDE KHHILKAAHPSGLSA
Sbjct: 241 NSHAKKGWEQFTDAVIKTISQRKEGVVFLLWGNSAQEKRRLIDESKHHILKAAHPSGLSA 300

Query: 308 NRGFFGCRHFSRTNMLLKELGIGAIDWQL 319
           NRGFFGCRHFSRTN LL+++GI +IDWQL
Sbjct: 301 NRGFFGCRHFSRTNELLEKMGIPSIDWQL 324

[Close]

BLAST of Cp4.1LG02g08970 vs. TrEMBL
Match: A0A061E9U8_THECC (Uracil-DNA glycosylase OS=Theobroma cacao GN=TCM_011079 PE=3 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.8e-121
Identity = 224/317 (70.66%), Postives = 258/317 (81.39%), Query Frame = 1


Query: 7   SLKSKTRTLIDIFQ--PALSKRLKTSQTLKTLATTDDKCDSELTLASSSMDISSSQKSRM 66
           ++ + ++T+ D FQ  P  +KR K S        +DD              +++ QKSRM
Sbjct: 16  AMAASSKTITDFFQANPGPAKRQKLS------TPSDDH--------QPFPSLTAEQKSRM 75

Query: 67  ETNKWLARSKRNLKISSDRVSKWE---NGCVKLEELLVDETWFEALPGEFEKPYALNLCK 126
           E NK +A+SKRNLKI S +VS+ +   +G VKLEELLV++TW EALPGE +KPYA NLCK
Sbjct: 76  EFNKCVAKSKRNLKICSQKVSQSKVEGSGFVKLEELLVEDTWLEALPGELQKPYANNLCK 135

Query: 127 FVETEICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVK 186
           FVE+EI S  VP+YPP  LIFNALNSTPF RVK VI+GQDPYHGPGQAMGLSFSVPEGVK
Sbjct: 136 FVESEISSGSVPIYPPQHLIFNALNSTPFHRVKAVIIGQDPYHGPGQAMGLSFSVPEGVK 195

Query: 187 IPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFT 246
           +PSSL+NIFKEL++DLGCSIPS GNLEKWAVQGVLLLN VLTVRKHQANSHAKKGWEQFT
Sbjct: 196 VPSSLVNIFKELKQDLGCSIPSDGNLEKWAVQGVLLLNTVLTVRKHQANSHAKKGWEQFT 255

Query: 247 DAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFSR 306
           DA+I+TISQKKEGV+FLLWGNSAQ K RLID+KKHHILKAAHPSGLSANRGFFGCRHFSR
Sbjct: 256 DAIIRTISQKKEGVIFLLWGNSAQEKSRLIDQKKHHILKAAHPSGLSANRGFFGCRHFSR 315

Query: 307 TNMLLKELGIGAIDWQL 319
           TN LL+++GI  IDWQL
Sbjct: 316 TNQLLEQMGIPPIDWQL 318

[Close]

BLAST of Cp4.1LG02g08970 vs. TrEMBL
Match: A0A072UXG8_MEDTR (Uracil-DNA glycosylase OS=Medicago truncatula GN=MTR_4g074330 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.5e-120
Identity = 228/313 (72.84%), Postives = 256/313 (81.79%), Query Frame = 1


Query: 10  SKTRTLIDIFQPALSKRLKTSQTLKTLATTDDKCDSELTLASSSMDISSSQKSRMETNKW 69
           + ++TLIDIF  A SKRLK      TL  ++D  +S  TL       +  QKSR+E NK 
Sbjct: 4   ASSKTLIDIFGRA-SKRLKP-----TLCKSEDNINSSSTL-------TVDQKSRIEHNKN 63

Query: 70  LARSKRNLKISSDRVSKWE----NGCVKLEELLVDETWFEALPGEFEKPYALNLCKFVET 129
           LA S++N KI  +RVSK +    +GCVKLEELLV+E+W EALPGEF+K YA+NL KFVET
Sbjct: 64  LALSRKNRKICIERVSKHKESLASGCVKLEELLVEESWLEALPGEFQKDYAVNLSKFVET 123

Query: 130 EICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSS 189
           EIC     VYPP  LIFNALN+TPF   KVVILGQDPYHGPGQAMGLSFSVPEGVK+PSS
Sbjct: 124 EICKDDY-VYPPAHLIFNALNTTPFQSAKVVILGQDPYHGPGQAMGLSFSVPEGVKVPSS 183

Query: 190 LLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVI 249
           L+NIFKEL++DLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSH+KKGWEQFTD VI
Sbjct: 184 LVNIFKELKQDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHSKKGWEQFTDTVI 243

Query: 250 QTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFSRTNML 309
           +TISQKKEGVVFLLWG SAQ KLRLID  KHHILKAAHPSGLSANRGFFGCRHFS+TN  
Sbjct: 244 KTISQKKEGVVFLLWGKSAQEKLRLIDATKHHILKAAHPSGLSANRGFFGCRHFSQTNKY 302

Query: 310 LKELGIGAIDWQL 319
           L+++GIG IDWQL
Sbjct: 304 LEQMGIGPIDWQL 302

[Close]

BLAST of Cp4.1LG02g08970 vs. TAIR10
Match: AT3G18630.1 (AT3G18630.1 uracil dna glycosylase)

HSP 1 Score: 397.5 bits (1020), Expect = 7.7e-111
Identity = 210/329 (63.83%), Postives = 245/329 (74.47%), Query Frame = 1


Query: 10  SKTRTLIDIFQPALSKRLKTSQT---------------LKTLATTDDKCDSELTLASSSM 69
           S  +TL+D FQPA  KRLK S +               L ++A +  +     ++A  S 
Sbjct: 4   STPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDSS 63

Query: 70  DISSSQKSRMETNKWLARSKRNLKISSDRVSKW--ENGC-VKLEELLVDETWFEALPGEF 129
            ++  Q +R E NK++A+SKRNL + S+RV+K   E  C V L ELLV+E+W +ALPGEF
Sbjct: 64  GLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGEF 123

Query: 130 EKPYALNLCKFVETEIC--SSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQA 189
            KPYA +L  F+E EI   S    +YPP  LIFNALN+TPFDRVK VI+GQDPYHGPGQA
Sbjct: 124 HKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQA 183

Query: 190 MGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQA 249
           MGLSFSVPEG K+PSSLLNIFKEL +D+GCSIP HGNL+KWAVQGVLLLNAVLTVR  Q 
Sbjct: 184 MGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQP 243

Query: 250 NSHAKKGWEQFTDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSA 309
           NSHAKKGWEQFTDAVIQ+ISQ+KEGVVFLLWG  AQ K +LID  KHHIL AAHPSGLSA
Sbjct: 244 NSHAKKGWEQFTDAVIQSISQQKEGVVFLLWGRYAQEKSKLIDATKHHILTAAHPSGLSA 303

Query: 310 NRGFFGCRHFSRTNMLLKELGIGAIDWQL 319
           NRGFF CRHFSR N LL+E+GI  IDWQL
Sbjct: 304 NRGFFDCRHFSRANQLLEEMGIPPIDWQL 330

[Close]

BLAST of Cp4.1LG02g08970 vs. NCBI nr
Match: gi|449445338|ref|XP_004140430.1| (PREDICTED: uracil-DNA glycosylase isoform X1 [Cucumis sativus])

HSP 1 Score: 596.3 bits (1536), Expect = 3.2e-167
Identity = 291/318 (91.51%), Postives = 307/318 (96.54%), Query Frame = 1


Query: 1   MASFSPSLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDDKCDSELTLASSSMDISSSQ 60
           MAS S SL SKTRTLIDIFQPALSKRLKTSQTLKTLAT DDKCDS+LTLASSS DIS+SQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFEKPYALNLC 120
            SRMETNKW+ARSKRNLK  SDRVSKWENGCVKLEELLV+ETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVETEICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVP+YPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240
           KIPSSLLNIFKELR+DLGCSIPSHGNL KWAVQGVLLLNAVL+VRKHQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240

Query: 241 TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVI+TISQKKEG++FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNMLLKELGIGAIDWQL 319
           RTN+LLKE+G  +IDWQL
Sbjct: 301 RTNILLKEMGTASIDWQL 318

[Close]

BLAST of Cp4.1LG02g08970 vs. NCBI nr
Match: gi|659130542|ref|XP_008465227.1| (PREDICTED: uracil-DNA glycosylase isoform X2 [Cucumis melo])

HSP 1 Score: 595.5 bits (1534), Expect = 5.4e-167
Identity = 291/318 (91.51%), Postives = 308/318 (96.86%), Query Frame = 1


Query: 1   MASFSPSLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDDKCDSELTLASSSMDISSSQ 60
           MAS S SL SKTRTLIDIFQPALSKRLKTSQTLKTLAT DDKCDS+LTLASSS D+S+SQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFEKPYALNLC 120
            SRMETNKW+ARSKRNLKI SDRVSKWENGC+KLEELLV+ETWFEALPGEFEKPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVETEICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVP+YPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240
           KIPSSLLNIFKEL++DLGCSIPSHGNL KWAVQGVLLLNAVL+VR+HQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240

Query: 241 TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300
           TDAVI+TISQKKEG+VFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS
Sbjct: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFS 300

Query: 301 RTNMLLKELGIGAIDWQL 319
           RTN+LLKELG  +IDWQL
Sbjct: 301 RTNILLKELGTASIDWQL 318

[Close]

BLAST of Cp4.1LG02g08970 vs. NCBI nr
Match: gi|659130540|ref|XP_008465225.1| (PREDICTED: uracil-DNA glycosylase isoform X1 [Cucumis melo])

HSP 1 Score: 581.6 bits (1498), Expect = 8.1e-163
Identity = 291/343 (84.84%), Postives = 308/343 (89.80%), Query Frame = 1


Query: 1   MASFSPSLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDDKCDSELTLASSSMDISSSQ 60
           MAS S SL SKTRTLIDIFQPALSKRLKTSQTLKTLAT DDKCDS+LTLASSS D+S+SQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFEKPYALNLC 120
            SRMETNKW+ARSKRNLKI SDRVSKWENGC+KLEELLV+ETWFEALPGEFEKPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVETEICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVP+YPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLT----------------- 240
           KIPSSLLNIFKEL++DLGCSIPSHGNL KWAVQGVLLLNAVL+                 
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSATSRILNQKLFKHHQTV 240

Query: 241 --------VRKHQANSHAKKGWEQFTDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKK 300
                   VR+HQANSHAK+GWEQFTDAVI+TISQKKEG+VFLLWGNSAQAKLRLIDEKK
Sbjct: 241 MKSNKADIVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKK 300

Query: 301 HHILKAAHPSGLSANRGFFGCRHFSRTNMLLKELGIGAIDWQL 319
           HHILKAAHPSGLSANRGFFGCRHFSRTN+LLKELG  +IDWQL
Sbjct: 301 HHILKAAHPSGLSANRGFFGCRHFSRTNILLKELGTASIDWQL 343

[Close]

BLAST of Cp4.1LG02g08970 vs. NCBI nr
Match: gi|1009106111|ref|XP_015870160.1| (PREDICTED: uracil-DNA glycosylase, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 458.4 bits (1178), Expect = 1.0e-125
Identity = 242/349 (69.34%), Postives = 274/349 (78.51%), Query Frame = 1


Query: 1   MASFSPSLKSKTRTLIDIFQP-----ALSKRLKTS-----------------QTLKTLAT 60
           MAS + S     +TL DIF+P     + +KRLK S                 Q + +L+ 
Sbjct: 1   MASRASSEIKTRKTLSDIFRPQHPAASAAKRLKPSSLGFSGSKQPPNPIHHCQGVASLSK 60

Query: 61  TDDKC-------DSELTLASSSMDISSSQKSRMETNKWLARSKRNLKISSDRVSKWENGC 120
            DD         DSE + +SSS  ++  Q SRME ++ LA++KRN K  S RVSK + G 
Sbjct: 61  CDDDGGVLPIPNDSESSRSSSSA-LTDQQISRMEFHRLLAKAKRNQKTCSGRVSKCKGGS 120

Query: 121 --VKLEELLVDETWFEALPGEFEKPYALNLCKFVETEICSSGVPVYPPPSLIFNALNSTP 180
             VKL+ELLV++TW EALPGEFEKPYA+NLCKFVE+EIC  G+P+YPPP LIFNALNST 
Sbjct: 121 GYVKLQELLVEDTWLEALPGEFEKPYAMNLCKFVESEICGGGIPIYPPPHLIFNALNSTS 180

Query: 181 FDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELREDLGCSIPSHGNLEK 240
           FDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSL+NIFKEL +DLGCSIPSHGNLEK
Sbjct: 181 FDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLVNIFKELEQDLGCSIPSHGNLEK 240

Query: 241 WAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIQTISQKKEGVVFLLWGNSAQAKLR 300
           WAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVI+TISQ++EGVVFLLWGNSAQ K+R
Sbjct: 241 WAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQQREGVVFLLWGNSAQEKIR 300

Query: 301 LIDEKKHHILKAAHPSGLSANRGFFGCRHFSRTNMLLKELGIGAIDWQL 319
           LID  KHHILKAAHPSGLSANRGFFGCRHFSRTN LLK++GI  IDWQL
Sbjct: 301 LIDTSKHHILKAAHPSGLSANRGFFGCRHFSRTNQLLKKMGIPTIDWQL 348

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BLAST of Cp4.1LG02g08970 vs. NCBI nr
Match: gi|645228486|ref|XP_008221018.1| (PREDICTED: uracil-DNA glycosylase [Prunus mume])

HSP 1 Score: 454.1 bits (1167), Expect = 2.0e-124
Identity = 229/314 (72.93%), Postives = 256/314 (81.53%), Query Frame = 1


Query: 9   KSKTRTLIDIFQPALS--KRLKTSQTLKTLATTDDKCDSELTLASSSMDISSSQKSRMET 68
           K+KT+TL+D+FQP  S  KRLKT     T + +           SSS D+++ QKSRME 
Sbjct: 59  KNKTKTLLDLFQPTASSAKRLKTDSIRATHSDSVSPVPPPSHDDSSSSDLTAQQKSRMEL 118

Query: 69  NKWLARSKRNLKISSDRVSKWENGC--VKLEELLVDETWFEALPGEFEKPYALNLCKFVE 128
            K LA+++RNL I S+R+S   +    VKLEELLV+ETW EA P E +KPYA  L KFVE
Sbjct: 119 QKLLAKARRNLSICSNRLSNSNSKGEGVKLEELLVEETWLEAFPSELQKPYAKTLSKFVE 178

Query: 129 TEICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPS 188
            EIC   +P+YPP  LIFNALNSTPFDRVK VILGQDPYHGPGQAMGLSFSVPEGVK+PS
Sbjct: 179 NEICGGALPIYPPTHLIFNALNSTPFDRVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPS 238

Query: 189 SLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAV 248
           SL+NIFKEL +DLGCSIPSHGNLEKWAVQGVLLLNAVLTVR HQANSHAKKGWEQFTDAV
Sbjct: 239 SLVNIFKELHQDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRNHQANSHAKKGWEQFTDAV 298

Query: 249 IQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRHFSRTNM 308
           I+TISQK+EGVVFLLWGNSAQ K +LIDE KHHILKAAHPSGLSANRGFFGCRHFSRTN 
Sbjct: 299 IKTISQKREGVVFLLWGNSAQQKSKLIDESKHHILKAAHPSGLSANRGFFGCRHFSRTNQ 358

Query: 309 LLKELGIGAIDWQL 319
           LL+E+GI  IDWQL
Sbjct: 359 LLEEMGIPPIDWQL 372

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g08970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UNG_ARATH	1.4e-109	63.83	Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana GN=UNG PE=1 SV=1	[more]
UNG_PSEPK	2.1e-73	58.93	Uracil-DNA glycosylase OS=Pseudomonas putida (strain KT2440) GN=ung PE=3 SV=1	[more]
UNG_PSEP1	3.5e-73	58.93	Uracil-DNA glycosylase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ung PE...	[more]
UNG_AZOVD	4.6e-73	58.48	Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=...	[more]
UNG_PSEPG	1.1e-71	58.48	Uracil-DNA glycosylase OS=Pseudomonas putida (strain GB-1) GN=ung PE=3 SV=1	[more]

BLAST of Cp4.1LG02g08970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMG3_CUCSA	2.2e-167	91.51	Uracil-DNA glycosylase OS=Cucumis sativus GN=Csa_5G289610 PE=3 SV=1	[more]
M5XNR7_PRUPE	6.8e-124	72.61	Uracil-DNA glycosylase OS=Prunus persica GN=PRUPE_ppa022483mg PE=3 SV=1	[more]
W9RJ98_9ROSA	6.8e-124	71.43	Uracil-DNA glycosylase OS=Morus notabilis GN=L484_009862 PE=3 SV=1	[more]
A0A061E9U8_THECC	1.8e-121	70.66	Uracil-DNA glycosylase OS=Theobroma cacao GN=TCM_011079 PE=3 SV=1	[more]
A0A072UXG8_MEDTR	3.5e-120	72.84	Uracil-DNA glycosylase OS=Medicago truncatula GN=MTR_4g074330 PE=3 SV=1	[more]

BLAST of Cp4.1LG02g08970 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18630.1	7.7e-111	63.83	uracil dna glycosylase	[more]

BLAST of Cp4.1LG02g08970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445338\|ref\|XP_004140430.1\|	3.2e-167	91.51	PREDICTED: uracil-DNA glycosylase isoform X1 [Cucumis sativus]	[more]
gi\|659130542\|ref\|XP_008465227.1\|	5.4e-167	91.51	PREDICTED: uracil-DNA glycosylase isoform X2 [Cucumis melo]	[more]
gi\|659130540\|ref\|XP_008465225.1\|	8.1e-163	84.84	PREDICTED: uracil-DNA glycosylase isoform X1 [Cucumis melo]	[more]
gi\|1009106111\|ref\|XP_015870160.1\|	1.0e-125	69.34	PREDICTED: uracil-DNA glycosylase, mitochondrial [Ziziphus jujuba]	[more]
gi\|645228486\|ref\|XP_008221018.1\|	2.0e-124	72.93	PREDICTED: uracil-DNA glycosylase [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0004844	uracil DNA N-glycosylase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006284	base-excision repair
GO:0006281	DNA repair

Vocabulary: **INTERPRO**
Term	Definition
IPR018085	Ura-DNA_Glyclase_AS
IPR005122	Uracil-DNA_glycosylase-like
IPR002043	UDG_fam1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004844	uracil DNA N-glycosylase activity
molecular_function	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g08970.1	Cp4.1LG02g08970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002043	Uracil-DNA glycosylase	HAMAP	MF_00148	UDG	coord: 100..317 score: 38
IPR002043	Uracil-DNA glycosylase	PANTHER	PTHR11264	URACIL-DNA GLYCOSYLASE	coord: 13..318 score: 2.9E
IPR002043	Uracil-DNA glycosylase	TIGRFAMs	TIGR00628	TIGR00628	coord: 101..308 score: 3.2
IPR005122	Uracil-DNA glycosylase-like	GENE3D	G3DSA:3.40.470.10		coord: 91..318 score: 1.7
IPR005122	Uracil-DNA glycosylase-like	PFAM	PF03167	UDG	coord: 151..307 score: 3.3
IPR005122	Uracil-DNA glycosylase-like	SMART	SM00986	UDG_2	coord: 146..306 score: 2.9
IPR005122	Uracil-DNA glycosylase-like	unknown	SSF52141	Uracil-DNA glycosylase-like	coord: 98..318 score: 1.09
IPR018085	Uracil-DNA glycosylase, active site	PROSITE	PS00130	U_DNA_GLYCOSYLASE	coord: 154..163 scor
None	No IPR available	PANTHER	PTHR11264:SF9	SUBFAMILY NOT NAMED	coord: 13..318 score: 2.9E
None	No IPR available	SMART	SM00987	UDG_2_a	coord: 146..306 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG02g08970	CmaCh01G010040	Cucurbita maxima (Rimu)	cmacpeB490
Cp4.1LG02g08970	CmoCh01G010430	Cucurbita moschata (Rifu)	cmocpeB448
Cp4.1LG02g08970	Carg25057	Silver-seed gourd	carcpeB1409

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG02g08970	Cucurbita pepo (Zucchini)	cpecpeB460
Cp4.1LG02g08970	Cucumber (Gy14) v1	cgycpeB0137
Cp4.1LG02g08970	Cucurbita maxima (Rimu)	cmacpeB046
Cp4.1LG02g08970	Cucurbita moschata (Rifu)	cmocpeB021
Cp4.1LG02g08970	Wild cucumber (PI 183967)	cpecpiB593
Cp4.1LG02g08970	Cucumber (Chinese Long) v2	cpecuB592
Cp4.1LG02g08970	Bottle gourd (USVL1VR-Ls)	cpelsiB448
Cp4.1LG02g08970	Watermelon (Charleston Gray)	cpewcgB479
Cp4.1LG02g08970	Watermelon (97103) v1	cpewmB532
Cp4.1LG02g08970	Melon (DHL92) v3.5.1	cpemeB502
Cp4.1LG02g08970	Cucumber (Gy14) v2	cgybcpeB952
Cp4.1LG02g08970	Melon (DHL92) v3.6.1	cpemedB594
Cp4.1LG02g08970	Silver-seed gourd	carcpeB0855
Cp4.1LG02g08970	Cucumber (Chinese Long) v3	cpecucB0732
Cp4.1LG02g08970	Wax gourd	cpewgoB0718