Cp4.1LG02g08520 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAGTTTTTGTTCGTGGTTATTCTCTATTTGAGTGTCTTTTATATCATTAATTTTTTTCTTTTTCACTCCCTCTGGGATTTTGTATCCTTTGAACTTTTAATCCTTTTCATTATATCTATGAGAATTTTCTTGTTAAAAAAACCTAGTAAATTTTTATTTATGGAACAATAGCATTTGATTTTTCCTTCTTTTTGTTTTTTGGTTTTTATTTTAATGATGTTTGATTAAATATTTGTATTTATTGCGGTTGATATTTGATTTATTGATCCCCACATTCAGGCTGCTCCTTTGAATCGCTTAAGCGACTTACATCCATTAACAACTTGCTCAAATCTAAAAGGCACTTTAACTAATGCTAAAACTGGATATTGGACATTTTTTATGGATAATTTTGAAATGGCCATCTCTGCTAGCAAGAATTTGTACGAAAATTGTGAAAAGGGATGGTTCTAAACTTTTTGGTTCTTCATTGACTATTCTTTAAGGAGCTGTTGTGATAACCTGTTAAGTTCTGGTACTTTCTTCTGTACCAGGGAAAGAGATGGGGTGGATGTTGGGGTGCATTATCTTGTTTTCACTCTCAGAAAGGAGAAAAGCGCATTGTGCCTGCATCTCGTTTACCTGAGGGCAATGTCGTGACAACCCAGCCAAATGGACCTCATGCAGCAGGAATAGCCAATCAGGCTACTGTGATAGCTCCATCCCTTTTAGCCCCACCTTCTTCACCAGCATCCTTTACAAATTCTGCACTCCCTTCAACAGCCCAATCACCTAGCTGTTTCTTGTCGTTGTCTGCCAACTCACCTGGAGGTCCTTCATCCACAATGTTCGCTACAGGGCCATATGCGCATGAAACACAACCGGTTTCTCCTCCTGTTTTCTCAGCTTTCACCACTGAACCGTCAACTGCTCCACTCACTCCCCCACCCGAACTAGCTCACCTAACCACTCCTTCTTCCCCTGATGTGCCTTTTGCTCAGTTCCTATCCTCATCGGTGGATCTCAAAGGAACTGGAAAGGCAAATTACGTTGCTTCCAATGATCTTCAAGCAGCATATTCTCTCTACCCTGGAAGTCCTGCCAGTAGCCTCGTGTCACCAATTTCAAGGACCTCCGGCGATTGCTTATCATCTTCTTTTCCTGAGAGGGACTTTCCACCACAGTGGAATCCTTCAGCTTCTCTCCAAGATGGAAAATATCCAAGAAGTGGTTCTGGTCGGCTATTTGGACATGAGAAAACTGGCACACCTCTTGCTTCTCAGGATTCTAATTTCTTCTGCCCTGCTACATTTGCACAATTCTATCTGGACAATCCACCATTCCCTCATACTGGTGGGAGGTTAAGTGTATCAAAGGATTCAGATGTTTACGCTTCTGGTGGGAATGGATACCAAAACCGGCACAGTAAGTCTCCAAAACAAGATGTGGAGGAAATAGAAGCTTACCGAGCATCTTTTGGTTTCAGTGCCGATGAAATTATAAGTACCACACAATACGTGGAGATATCTGATGTAATGGAAGATTCCTTTACTATGAGACCTTTTACTTCAACTAGTCTGTCTGCAGAAGAAAGTATTCAACCTCCATTAGTGGGTGAAAAACTGAAATCCACGCAGGCAACTTTACAGAGTCAAAGAAGTATTAAATCAGCATCTGACGTTGTTGAAAAAGAAACCTGCTCTGAAGTCCTGGCATTATGCAATGGCTGTAAAGGTGAGCCACTGTTCCCTGTTACAAGCTCACACTTGTTTCATGAGAAATCAAAAGAAAATAAAGACAAATACATTTTGGGGAACTTTTTCAAAATGTTGCAACTTTTCTTTCGGTTTCATTATTTCCTTTTTATATACACTGACTCACAATTCTGATGCTAGTAGTCAGGTTAAATTACATTTTTGGGATGTGGTTTTAGGAAAGCTACAATTTAGTTATGGTTACAATTGTCACCTGTTTGTCACCTGTTTGATGCAGACGATAAATTGCAAAGACAACCTGGTAACTTGCCAGGATCAAGTACTTCCCAAGGTGAAACAGAAGACCTATTCTCAAGAATAGGGTCGTCCAAAAATAGCCGCAAGTATAATCATGCTTTATCCTGCTCTGATGCAGAAGTTGATTACAGAAGAGGAAGGAGCCTGAGGGGGGAGGTCAAGGGAGATTTTTTATGGCATGACTAAGAGCCATTTCTGAAATAGTTTGTAGTATGTGTATCTGTTCTTTGCTTTGCGGGTTTCCATGGAATGTCTAACCTATGACCTACCTGTTCTCTGAGTTGACTTGATCAGTGGATGGATGCATATAGTTTGTGTTCTTTATCGTTCCAGTTTAGAAATGGAATGGGTCAAATCTCTGTATTTGGTAGACGAAGTGTCTTTTTTCCAATGAATTATATAATAGCATGTACAATCTTGCCCATCTTGTGCATACGTCATCATTATGCATATCCAAACTCCCGTTAATAGTGGTCATTGATTAGGTTTTCTTTAGAATCTAAGGT GAAAAGTTTTTGTTCGTGGTTATTCTCTATTTGAGTGTCTTTTATATCATTAATTTTTTTCTTTTTCACTCCCTCTGGGATTTTGTATCCTTTGAACTTTTAATCCTTTTCATTATATCTATGAGAATTTTCTTGTTAAAAAAACCTAGTAAATTTTTATTTATGGAACAATAGCATTTGATTTTTCCTTCTTTTTGTTTTTTGGTTTTTATTTTAATGATGTTTGATTAAATATTTGTATTTATTGCGGTTGATATTTGATTTATTGATCCCCACATTCAGGCTGCTCCTTTGAATCGCTTAAGCGACTTACATCCATTAACAACTTGCTCAAATCTAAAAGGCACTTTAACTAATGCTAAAACTGGATATTGGACATTTTTTATGGATAATTTTGAAATGGCCATCTCTGCTAGCAAGAATTTGTACGAAAATTGTGAAAAGGGATGGTTCTAAACTTTTTGGTTCTTCATTGACTATTCTTTAAGGAGCTGTTGTGATAACCTGTTAAGTTCTGGTACTTTCTTCTGTACCAGGGAAAGAGATGGGGTGGATGTTGGGGTGCATTATCTTGTTTTCACTCTCAGAAAGGAGAAAAGCGCATTGTGCCTGCATCTCGTTTACCTGAGGGCAATGTCGTGACAACCCAGCCAAATGGACCTCATGCAGCAGGAATAGCCAATCAGGCTACTGTGATAGCTCCATCCCTTTTAGCCCCACCTTCTTCACCAGCATCCTTTACAAATTCTGCACTCCCTTCAACAGCCCAATCACCTAGCTGTTTCTTGTCGTTGTCTGCCAACTCACCTGGAGGTCCTTCATCCACAATGTTCGCTACAGGGCCATATGCGCATGAAACACAACCGGTTTCTCCTCCTGTTTTCTCAGCTTTCACCACTGAACCGTCAACTGCTCCACTCACTCCCCCACCCGAACTAGCTCACCTAACCACTCCTTCTTCCCCTGATGTGCCTTTTGCTCAGTTCCTATCCTCATCGGTGGATCTCAAAGGAACTGGAAAGGCAAATTACGTTGCTTCCAATGATCTTCAAGCAGCATATTCTCTCTACCCTGGAAGTCCTGCCAGTAGCCTCGTGTCACCAATTTCAAGGACCTCCGGCGATTGCTTATCATCTTCTTTTCCTGAGAGGGACTTTCCACCACAGTGGAATCCTTCAGCTTCTCTCCAAGATGGAAAATATCCAAGAAGTGGTTCTGGTCGGCTATTTGGACATGAGAAAACTGGCACACCTCTTGCTTCTCAGGATTCTAATTTCTTCTGCCCTGCTACATTTGCACAATTCTATCTGGACAATCCACCATTCCCTCATACTGGTGGGAGGTTAAGTGTATCAAAGGATTCAGATGTTTACGCTTCTGGTGGGAATGGATACCAAAACCGGCACAGTAAGTCTCCAAAACAAGATGTGGAGGAAATAGAAGCTTACCGAGCATCTTTTGGTTTCAGTGCCGATGAAATTATAAGTACCACACAATACGTGGAGATATCTGATGTAATGGAAGATTCCTTTACTATGAGACCTTTTACTTCAACTAGTCTGTCTGCAGAAGAAAGTATTCAACCTCCATTAGTGGGTGAAAAACTGAAATCCACGCAGGCAACTTTACAGAGTCAAAGAAGTATTAAATCAGCATCTGACGTTGTTGAAAAAGAAACCTGCTCTGAAGTCCTGGCATTATGCAATGGCTGTAAAGACGATAAATTGCAAAGACAACCTGGTAACTTGCCAGGATCAAGTACTTCCCAAGGTGAAACAGAAGACCTATTCTCAAGAATAGGGTCGTCCAAAAATAGCCGCAAGTATAATCATGCTTTATCCTGCTCTGATGCAGAAGTTGATTACAGAAGAGGAAGGAGCCTGAGGGGGGAGGTCAAGGGAGATTTTTTATGGCATGACTAAGAGCCATTTCTGAAATAGTTTGTAGTATGTTTGACTTGATCAGTGGATGGATGCATATAGTTTGTGTTCTTTATCGTTCCAGTTTAGAAATGGAATGGGTCAAATCTCTGTATTTGGTAGACGAAGTGTCTTTTTTCCAATGAATTATATAATAGCATGTACAATCTTGCCCATCTTGTGCATACGTCATCATTATGCATATCCAAACTCCCGTTAATAGTGGTCATTGATTAGGTTTTCTTTAGAATCTAAGGT ATGTTCGCTACAGGGCCATATGCGCATGAAACACAACCGGTTTCTCCTCCTGTTTTCTCAGCTTTCACCACTGAACCGTCAACTGCTCCACTCACTCCCCCACCCGAACTAGCTCACCTAACCACTCCTTCTTCCCCTGATGTGCCTTTTGCTCAGTTCCTATCCTCATCGGTGGATCTCAAAGGAACTGGAAAGGCAAATTACGTTGCTTCCAATGATCTTCAAGCAGCATATTCTCTCTACCCTGGAAGTCCTGCCAGTAGCCTCGTGTCACCAATTTCAAGGACCTCCGGCGATTGCTTATCATCTTCTTTTCCTGAGAGGGACTTTCCACCACAGTGGAATCCTTCAGCTTCTCTCCAAGATGGAAAATATCCAAGAAGTGGTTCTGGTCGGCTATTTGGACATGAGAAAACTGGCACACCTCTTGCTTCTCAGGATTCTAATTTCTTCTGCCCTGCTACATTTGCACAATTCTATCTGGACAATCCACCATTCCCTCATACTGGTGGGAGGTTAAGTGTATCAAAGGATTCAGATGTTTACGCTTCTGGTGGGAATGGATACCAAAACCGGCACAGTAAGTCTCCAAAACAAGATGTGGAGGAAATAGAAGCTTACCGAGCATCTTTTGGTTTCAGTGCCGATGAAATTATAAGTACCACACAATACGTGGAGATATCTGATGTAATGGAAGATTCCTTTACTATGAGACCTTTTACTTCAACTAGTCTGTCTGCAGAAGAAAGTATTCAACCTCCATTAGTGGGTGAAAAACTGAAATCCACGCAGGCAACTTTACAGAGTCAAAGAAGTATTAAATCAGCATCTGACGTTGTTGAAAAAGAAACCTGCTCTGAAGTCCTGGCATTATGCAATGGCTGTAAAGACGATAAATTGCAAAGACAACCTGGTAACTTGCCAGGATCAAGTACTTCCCAAGGTGAAACAGAAGACCTATTCTCAAGAATAGGGTCGTCCAAAAATAGCCGCAAGTATAATCATGCTTTATCCTGCTCTGATGCAGAAGTTGATTACAGAAGAGGAAGGAGCCTGAGGGGGGAGGTCAAGGGAGATTTTTTATGGCATGACTAA MFATGPYAHETQPVSPPVFSAFTTEPSTAPLTPPPELAHLTTPSSPDVPFAQFLSSSVDLKGTGKANYVASNDLQAAYSLYPGSPASSLVSPISRTSGDCLSSSFPERDFPPQWNPSASLQDGKYPRSGSGRLFGHEKTGTPLASQDSNFFCPATFAQFYLDNPPFPHTGGRLSVSKDSDVYASGGNGYQNRHSKSPKQDVEEIEAYRASFGFSADEIISTTQYVEISDVMEDSFTMRPFTSTSLSAEESIQPPLVGEKLKSTQATLQSQRSIKSASDVVEKETCSEVLALCNGCKDDKLQRQPGNLPGSSTSQGETEDLFSRIGSSKNSRKYNHALSCSDAEVDYRRGRSLRGEVKGDFLWHD
BLAST of Cp4.1LG02g08520 vs. Swiss-Prot
Match: Y1666_ARATH (Uncharacterized protein At1g76660 OS=Arabidopsis thaliana GN=At1g76660 PE=2 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 3.4e-88 Identity = 198/356 (55.62%), Postives = 236/356 (66.29%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. TrEMBL
Match: A0A0A0L1G3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G665140 PE=4 SV=1) HSP 1 Score: 604.4 bits (1557), Expect = 9.3e-170 Identity = 314/364 (86.26%), Postives = 333/364 (91.48%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. TrEMBL
Match: M5WAN0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006213mg PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 3.2e-138 Identity = 269/372 (72.31%), Postives = 303/372 (81.45%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. TrEMBL
Match: A0A067HC38_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013739mg PE=4 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 6.1e-137 Identity = 254/368 (69.02%), Postives = 304/368 (82.61%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. TrEMBL
Match: V4TGC4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000992mg PE=4 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 6.1e-137 Identity = 254/368 (69.02%), Postives = 304/368 (82.61%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. TrEMBL
Match: A0A067KKH5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08002 PE=4 SV=1) HSP 1 Score: 489.2 bits (1258), Expect = 4.4e-135 Identity = 258/369 (69.92%), Postives = 295/369 (79.95%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. TAIR10
Match: AT1G76660.1 (AT1G76660.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 326.6 bits (836), Expect = 1.9e-89 Identity = 198/356 (55.62%), Postives = 236/356 (66.29%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. TAIR10
Match: AT5G52430.1 (AT5G52430.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 95.5 bits (236), Expect = 7.1e-20 Identity = 65/152 (42.76%), Postives = 87/152 (57.24%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. TAIR10
Match: AT4G25620.1 (AT4G25620.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 95.5 bits (236), Expect = 7.1e-20 Identity = 56/101 (55.45%), Postives = 69/101 (68.32%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. TAIR10
Match: AT1G63720.1 (AT1G63720.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1)) HSP 1 Score: 85.9 bits (211), Expect = 5.7e-17 Identity = 54/111 (48.65%), Postives = 71/111 (63.96%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. NCBI nr
Match: gi|659105232|ref|XP_008453041.1| (PREDICTED: uncharacterized protein At1g76660 [Cucumis melo]) HSP 1 Score: 620.9 bits (1600), Expect = 1.4e-174 Identity = 320/364 (87.91%), Postives = 339/364 (93.13%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. NCBI nr
Match: gi|449466510|ref|XP_004150969.1| (PREDICTED: uncharacterized protein At1g76660 [Cucumis sativus]) HSP 1 Score: 604.4 bits (1557), Expect = 1.3e-169 Identity = 314/364 (86.26%), Postives = 333/364 (91.48%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. NCBI nr
Match: gi|1009126185|ref|XP_015880014.1| (PREDICTED: uncharacterized protein At1g76660 [Ziziphus jujuba]) HSP 1 Score: 507.7 bits (1306), Expect = 1.7e-140 Identity = 259/369 (70.19%), Postives = 303/369 (82.11%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. NCBI nr
Match: gi|645255247|ref|XP_008233411.1| (PREDICTED: uncharacterized protein At1g76660 isoform X1 [Prunus mume]) HSP 1 Score: 500.0 bits (1286), Expect = 3.6e-138 Identity = 270/372 (72.58%), Postives = 303/372 (81.45%), Query Frame = 1
BLAST of Cp4.1LG02g08520 vs. NCBI nr
Match: gi|595846660|ref|XP_007209172.1| (hypothetical protein PRUPE_ppa006213mg [Prunus persica]) HSP 1 Score: 499.6 bits (1285), Expect = 4.7e-138 Identity = 269/372 (72.31%), Postives = 303/372 (81.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |