Cp4.1LG02g07830 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g07830
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGTP-binding protein, HflX
LocationCp4.1LG02 : 515559 .. 520654 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGACTATATTGGCCCAACGCGGAAGTGCTTTTCAACGGAGCCTACCGCTGTGTCTCTGATAATCTCCCTCTCCATGGATCTTTTGTAAAGCCTAATCAGGAAGTAGGAGGAACCGAAGAAATTGATGAGCTTATCGATGGTATCTCGAGCAGTGAACCAGAGCCTAAATCGTAGTTATGGTGTAGGGTTAATAAGAAAGAAGGTACAAGAAGATGGGGACAGCCTTGAGAGCGTGTTTAAGCTGCGAAATGGAAGGGAGGTATGATTCTTTAAGCCTTCCTTTCCTCCTCTGAACAGTACTGTTATTGTTATTCTTCTTGTTCTCTTCGACTGTAGAATCAATTAGGATACCAAGATTCTTACGCCCCATATTTCGATGTTTTTCTTTCATCTATGCTTCTTCTTCCGACTGCCCTACATGATTTAGGACGTAAAATAGGATGCATCGTACTTTTGATGTTTGGAATCTGGATAGTTTAGCTAAACAATCAGAGCATCTTTCTATTTCAGCTTCTATTGGTTGGAATCAAACTTATGCTAGAAAATCCTTTTGAGCCTTTACATTCCTAATGTTTCAATATCCGGAGCTTTCCGTTTCTAGTCTGTAATTATTAGTGAATGTATCTTAAATTTTCACATAGGACTTATATGTGTTCCAGCCAACTTTCTCATGATAAGGATATTCTGGTTATGTATGATATGCAACTTTCTCATGATAAGGATATTCTGGTTATGTATGATATGCTATGTGTTAAGAATGAGATAGAAAATATAATTGGGAAGGTGTGTATTATCATTGATATTGATATCCTTTAAATAGGATACAAAAAGTACAAATGAGAAAAATATAAAATAATTAAATACTGAGAATAAAATAAAATATAGTCTAAATCAAATCATAAATGGAAGAATATTAAGATATAATATCTAAGATATATTCCATAAATAATATATCTCAACACTATGTTCAGAAGGTTATTCTTTGGCTTATTTGTTTAAATTAAGTTTGAATTTGTTTAAATTAAGTTTGAATTGAAATTCATATCCTTCGCTGGATTGGTGTTCTCCCGAAGGAATTAGAGTCCGTCTGGATGCATCGAAAACAGTACAGAAGCTGACGCTTGCTGTTCCTATACCAGTAGTTTCTTTGGTAAGCAAATTCATGTGAGCATGAACTTTCATTACTTTCTACTTTTGTGTATGTGAGGGTAGTTCTTGTTGCCAACATATTAGTGCCTTCAATGATGTTTTAGGATGGGTACACAAATGCTGGGAAGAGTACGCTCTTGAATCAGTTGGCTGGAGTGGAAGTCCTTGCAGAGGATTGATTGTTTGCAACCACCTTTAATCCAGCTGCAAGAAGGGTTCAGGTACTTTTAGCTAGACTTAATCTTGCAGCGTTATCATGTTCATGAATCATCCTTGGCACTAGAGTAATACAATGGTATGATATTTTCCACTTTGAGCATAAGCTTTTGTGGCTTTATTTTTTGTTTTCCCAAAAGGTCTCATACCAATGGAGATGTATTTTTTACTTTAAACTTATGATCAACCCCTTAATTAACCGAGGTGGGACTCCTCTCCCAACATTCCTCAACAGGAGAAGAGATGGTTTTCCGATCCTCGAAATCATAGGATTTTCTTCTTTTTAAATCTCCTAGAAGATAGACCTTAATAAATTGGTTGAGAGAAACTTGGCTCGTCTTTGAAAGAGTGTCCATAGACTAGTTAAAGAAGTCCGCACGTATTTAGGAGTCCACAATGAGAATTTGAAGGTTCAAAGAAGTTTCTTCTAGAGAATTAAAGCAGAAGTGCATTGAGCAGATTAATTGCTCGCTGTATTTGCCGGCCGTCTGACTAAAGAATACACCAATGAGAGTAAATTAGGTGCTGGACTTTTTCTGGATTTATTGAAGGTGTTAATGTTCATATTCAGCAAATGCTGTTTACTTCTAATCAACATATTAGGTGTTGTTTCCTGATATTGTGATTTATATGTCACAGTTACATGATCTATGAAATAATGGAGCCTTTTTTGACTATATAATAATCTTCTGTCTGGCTTTTATTTTAGACCAACTTGTGATCCTCCTGGAAGTACTGTGGTTTTTAATTCATTTTGTTCACTTTATATGCTTGTTTCACACTCTCCAGATGAAAAATGGAAACGAGTTTCTACTTGCCGATACTGTTGGTTTCATCCAAAAGTTACCAACTATGCTGGTGAGATTTGCAGCCACAAGATAAACATCATATTCATCTAGCATTTCGTTTTGAATCTGTGTAACAACTCAAGCCCACCGCTAGCAGATATTGTTTGCTTTGGATCGTTACGTATCGTCGTCAACCCTATGGTTTTCGAAACGCATTTATTAGGGAGAGGTTTCCACACCCTTATAAGGAATGATTCGTTCCTCACTCCAACTGATGTGAGATCTCACGATCCACCCCCTTTGGGGCCCAACGTCTTCGCTAGCACACCGCATGGTGTCTGGCTTTGATACCATTTGTAACAACCCAAACCCACCGCTAGCAAATATTGTCCGTTTTGGCCGTTACGTATCGCCTTCAGTTTCACGATTTTTAAAATGCGTCTACTGGAGAGAGATTTTCACACCTCTATAAGAAATGTTTCGTTCCTCTCTCCAACCAATACGAGATCTCACAATCTGCCGGTACCATAAATCTCATTTTTTTTTCATTTGTCTTTCTGAAGAGTGTAGTAGTAGTAAAATCCCCAGATAGCTGTATTGTTATTCTGGTTAAGTCCTACAGGTTGCTGCATTCAGAGCAACATTAGAGGAGATATCAGAATTATTATTGCTGGTTCAACTGGTGAACCTCGGGTGATTGGTTAGTCAATTGATGTTTCTGATCACCTTAACCTATTTTCTGATTGGATATTTCATCAATTTCAGCCATCCGCTGGCTGAGCAACAGATAGAGGCTGTGGATAAAGTTCTTTCAGAATTGGATGTGTCGTCGATTCCGAGGTNGGGGGGGGGGGGGGGGGAAATCTTATGGAATACGATCCTTTACCCACCCCCCACCACAAGGAAAATAAAAGGAAAGAGAGAAGACTACTTGAGATTTTTATCTGTGCTTATTATAGATTTCTTTGTCCTTTTGTCATTGGCTATGCTTGTATGGATTTGCTTTACTGGAATCTCTTTGTAGTTTATTCTCTCTCTTTTATTCTTCAGAAGATAGATGGGACAATAAACAGTTCTTTTTTAAAAAAAGAATAAAATTCTCTTAAGTATGTTAAACTAAAAACGGATTTTCAAATGGGTTTCTGTTTTTCTTGTAGCTTAATCTTTTAGCTAATGTTATTCTCTGCCTTTATAGCCATTATGTGGAATAGAGAAAGAGAGATATTGGGAGAGGTTTGGTCCTTAGTTAGGTTCTATACCTCTCTTTGGTGTTGGTGTCTAAAGAGTTTTGTATTTATCCTTAGTTTCTTATTCTTAACGGACTGATGGATGGATCCCCTTCTTGTAGTTTTGTTTGGCATTGTCCCCTTTTGGTTTCATTTGCTCCATGGAAGTTTGGTGTCTAATTTTAAAGAAAATCCTGTAGCTTATGTAAAGGATCCTTGTTTGTAATTCTATGGACAAATTCAAGTTTCTTCTCTAATTCCTATGTGCGTCTAACTACAAATTGTCAAACGGCAGGTTGACAAGGTTAGTGATCCTCAAAATATTAGAGGGGATGTTATTTGTGTACAAGTGAGATCCCACGTAGCATCCTGTATAGAGGTGTGAAAACCTCCCTTTAGCAGACGCGTTTCAAAACTATGAGGCTGACAGCGATACGTGATAGGCCAAAGTGGATAATATCTGCACCAAGTGATGATGGTTTGGACGAATTCTGCAATGGAGTTCGGGGAAAATTGAAGGTGTATTTACTTTGTAGTCTTGAAGATGGTTGTTTCTTCTCTATTCTTTGTTAGCAGCAGGTGGCACTGCTTTTAACCTAAATATGAAGACAAGAAATGAAATAATTGTTTTGAATGGGCAGGACTCAATGGTTTGGGTAGAAGCCTTGATCCAGTTTGACGGAGGCGAGTTCTTGAGCACTGTGTATCAGGTTGAAGTGGTAGAGAAAACTGTAAGTAAATCCTCCATCCTTTCTGATTTCCATTTAGTTTTCTTGTTTTGGAAGATTTTTAAATATCTTGAGAGTGCATTTGGTTGAAGCAATTTGTTGGTGTATTTAAAAAAATGGTGGTAGGAAGAGAAGCTATTTAAAAAATGTGTCAACAAATTGACATCTACTCTTTTTCTTGAGGTCGGTGGTAGGAAGAGCAGCTCAAAGTTTGACAATGTCCTAGATGGTAAGAAATGAAAAATAATGATGTTGGATGACCCATCCGGTAACAGTTCAAGCCCACTGCTAGCAGCTATTATTCGTTTTGGCCCGTTACATATCGTCATTAGCTTCATAGTTTTAAAACGCGTCTGCTAGGGAGAAGTTTTCGTATCCTTATAAAAAATGTTTCGTTTCACTCTCCAACTAATGCAGCTATTTTGTAAGTATAACAGATTGTAAACAGAGAAGCCAAGCAAATAGTGCCATGGCTCCATTCAGAGGCCCAGCCTAATGGGATTACGGGGAAAAAAAAATTACACTACAAATTATTTGGTACTTGGTCAGATTTTTCTGGTAGGTACATATCTTTGGGTCACGCATCATTATCAGGCATCGTTGTCCTGAAGTCACCAGTAAAAAAATGGATTGAGTCGGCGATCTACCCTATGCAGGACCAGAATCTGAGCCATAATTAGAACATTTATATATAGAAACCATTGGGGGGTTGAGTAAATTTTTGGTTCAACCAATATTTGAAGTCATTGTATGGCTCACCATCTCTTTCTCTCTCTCTCATGGCCTAATGAGCCCTCTTTTTGCCGAATAAAGCCATTCATTTATAATGCAAGACTCCACTAAGCTCATAAAGAGTAAAATGACAGAATATGTTACAAATTTTGGAAAGATATTAAACCTCAATCAATACATACTATATGTTAATGGGTTACTTCTTTAGTTGCAAGTTTTGGCATATAAGTCGGTGACATACATTTCTATCTTTA

mRNA sequence

ATGCGACTATATTGGCCCAACGCGGAAGTGCTTTTCAACGGAGCCTACCGCTGTGTCTCTGATAATCTCCCTCTCCATGGATCTTTTGTAAAGCCTAATCAGGAAGTAGGAGGAACCGAAGAAATTGATGAGCTTATCGATGGAATTAGAGTCCGTCTGGATGCATCGAAAACAGTACAGAAGCTGACGCTTGCTGTTCCTATACCAGTAGTTTCTTTGGATGGGTACACAAATGCTGGGAAGAGTACGCTCTTGAATCAGTTGGCTGGAGTGGAAGTCCTTGCAGAGGATTGATTGTTTGCAACCACCTTTAATCCAGCTGCAAGAAGGGTTCAGATGAAAAATGGAAACGAGTTTCTACTTGCCGATACTGTTGGTTTCATCCAAAAGTTACCAACTATGCTGGTTGACAAGGTTAGTGATCCTCAAAATATTAGAGGGGATGTTATTTGTGTACAAGTGAGATCCCACGTAGCATCCTGTATAGAGGTGTGAAAACCTCCCTTTAGCAGACGCGTTTCAAAACTATGAGGCTGACAGCGATACGTGATAGGCCAAAGTGGATAATATCTGCACCAAGTGATGATGGTTTGGACGAATTCTGCAATGGAGTTCGGGGAAAATTGAAGGACTCAATGGTTTGGGTAGAAGCCTTGATCCAGTTTGACGGAGGCGAGTTCTTGAGCACTGTGTATCAGGTTGAAGTGGTAGAGAAAACTGTAAGTAAATCCTCCATCCTTTCTGATTTCCATTTAGTTTTCTTGTTTTGGAAGATTTTTAAATATCTTGAGAGTGCATTTGGTTGAAGCAATTTGTTGGTGTATTTAAAAAAATGGTGGTAGGAAGAGAAGCTATTTAAAAAATGTGTCAACAAATTGACATCTACTCTTTTTCTTGAGGTCGGTGGTAGGAAGAGCAGCTCAAAGTTTGACAATGTCCTAGATGGTAAGAAATGAAAAATAATGATGTTGGATGACCCATCCGGTAACAGTTCAAGCCCACTGCTAGCAGCTATTATTCGTTTTGGCCCGTTACATATCGTCATTAGCTTCATAGTTTTAAAACGCGTCTGCTAGGGAGAAGTTTTCGTATCCTTATAAAAAATGTTTCGTTTCACTCTCCAACTAATGCAGCTATTTTGTAAGTATAACAGATTGTAAACAGAGAAGCCAAGCAAATAGTGCCATGGCTCCATTCAGAGGCCCAGCCTAATGGGATTACGGGGAAAAAAAAATTACACTACAAATTATTTGGTACTTGGTCAGATTTTTCTGGTAGGTACATATCTTTGGGTCACGCATCATTATCAGGCATCGTTGTCCTGAAGTCACCAGTAAAAAAATGGATTGAGTCGGCGATCTACCCTATGCAGGACCAGAATCTGAGCCATAATTAGAACATTTATATATAGAAACCATTGGGGGGTTGAGTAAATTTTTGGTTCAACCAATATTTGAAGTCATTGTATGGCTCACCATCTCTTTCTCTCTCTCTCATGGCCTAATGAGCCCTCTTTTTGCCGAATAAAGCCATTCATTTATAATGCAAGACTCCACTAAGCTCATAAAGAGTAAAATGACAGAATATGTTACAAATTTTGGAAAGATATTAAACCTCAATCAATACATACTATATGTTAATGGGTTACTTCTTTAGTTGCAAGTTTTGGCATATAAGTCGGTGACATACATTTCTATCTTTA

Coding sequence (CDS)

ATGCGACTATATTGGCCCAACGCGGAAGTGCTTTTCAACGGAGCCTACCGCTGTGTCTCTGATAATCTCCCTCTCCATGGATCTTTTGTAAAGCCTAATCAGGAAGTAGGAGGAACCGAAGAAATTGATGAGCTTATCGATGGAATTAGAGTCCGTCTGGATGCATCGAAAACAGTACAGAAGCTGACGCTTGCTGTTCCTATACCAGTAGTTTCTTTGGATGGGTACACAAATGCTGGGAAGAGTACGCTCTTGAATCAGTTGGCTGGAGTGGAAGTCCTTGCAGAGGATTGA

Protein sequence

MRLYWPNAEVLFNGAYRCVSDNLPLHGSFVKPNQEVGGTEEIDELIDGIRVRLDASKTVQKLTLAVPIPVVSLDGYTNAGKSTLLNQLAGVEVLAED
Homology
[Close]
BLAST of Cp4.1LG02g07830 vs. TrEMBL
Match: G7I5C6_MEDTR (GTP-binding protein HflX OS=Medicago truncatula GN=MTR_1g022980 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-06
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 1 

Query: 57  KTVQKLTLAVPIPVVSLDGYTNAGKSTLLNQLAGVEVLAED 98
           K  +   L+VP+PVVSL GYTNAGKSTLLNQL G +VLAED
Sbjct: 308 KQYRNRRLSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAED 348

[Close]
BLAST of Cp4.1LG02g07830 vs. TrEMBL
Match: A0A103XYP8_CYNCS (GTPase HflX OS=Cynara cardunculus var. scolymus GN=Ccrd_022442 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-06
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 1 

Query: 64  LAVPIPVVSLDGYTNAGKSTLLNQLAGVEVLAED 98
           LAVP+PVVSL GYTNAGKSTLLNQL G  VLAED
Sbjct: 358 LAVPVPVVSLVGYTNAGKSTLLNQLTGANVLAED 391

[Close]
BLAST of Cp4.1LG02g07830 vs. TrEMBL
Match: V7CRA0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G011200g PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-06
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 1 

Query: 57  KTVQKLTLAVPIPVVSLDGYTNAGKSTLLNQLAGVEVLAED 98
           K  +   L+VP+PVVSL GYTNAGKSTLLNQL G +VLAED
Sbjct: 316 KQYRSRRLSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAED 356

[Close]
BLAST of Cp4.1LG02g07830 vs. TrEMBL
Match: M0U990_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-06
Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 1 

Query: 45 LIDGIRVRLDA----SKTVQKLTLAVPIPVVSLDGYTNAGKSTLLNQLAGVEVLAED 98
          LI  +R  L++     K  +   L+VP+PVVSL GYTNAGKSTLLN+L G +VLAED
Sbjct: 22 LISALRKELESVRQHRKQYRNRRLSVPVPVVSLVGYTNAGKSTLLNRLTGADVLAED 78

[Close]
BLAST of Cp4.1LG02g07830 vs. TrEMBL
Match: A0A076L220_CICAR (Peroxidase OS=Cicer arietinum PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.1e-06
Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 1 

Query: 57 KTVQKLTLAVPIPVVSLDGYTNAGKSTLLNQLAGVEVLAED 98
          K  +   ++VP+PVVSL GYTNAGKSTLLNQL G +VLAED
Sbjct: 47 KQYRNRRISVPVPVVSLVGYTNAGKSTLLNQLTGADVLAED 87

[Close]
BLAST of Cp4.1LG02g07830 vs. TAIR10
Match: AT5G57960.1 (AT5G57960.1 GTP-binding protein, HflX)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-08
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 1 

Query: 57  KTVQKLTLAVPIPVVSLDGYTNAGKSTLLNQLAGVEVLAED 98
           K  +   +A+P+PVVSL GYTNAGKSTLLNQL G  VLAE+
Sbjct: 298 KQYRSRRVAIPVPVVSLVGYTNAGKSTLLNQLTGANVLAEN 338

[Close]
BLAST of Cp4.1LG02g07830 vs. NCBI nr
Match: gi|659133040|ref|XP_008466522.1| (PREDICTED: putative GTP-binding protein 6 isoform X2 [Cucumis melo])

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-06
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 1 

Query: 46  IDGIRVRLDASKTVQKLTLAVPIPVVSLDGYTNAGKSTLLNQLAGVEVLAED 98
           ++ +RV     K  +    +VP+PVVSL GYTNAGKSTLLNQL G EVLAED
Sbjct: 305 LESVRVH---RKQYRSRRFSVPVPVVSLVGYTNAGKSTLLNQLTGAEVLAED 353

[Close]
BLAST of Cp4.1LG02g07830 vs. NCBI nr
Match: gi|357438103|ref|XP_003589327.1| (GTP-binding protein HflX [Medicago truncatula])

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-06
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 1 

Query: 57  KTVQKLTLAVPIPVVSLDGYTNAGKSTLLNQLAGVEVLAED 98
           K  +   L+VP+PVVSL GYTNAGKSTLLNQL G +VLAED
Sbjct: 308 KQYRNRRLSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAED 348

[Close]
BLAST of Cp4.1LG02g07830 vs. NCBI nr
Match: gi|976912876|gb|KVH99328.1| (GTPase HflX [Cynara cardunculus var. scolymus])

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-06
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 1 

Query: 64  LAVPIPVVSLDGYTNAGKSTLLNQLAGVEVLAED 98
           LAVP+PVVSL GYTNAGKSTLLNQL G  VLAED
Sbjct: 358 LAVPVPVVSLVGYTNAGKSTLLNQLTGANVLAED 391

[Close]
BLAST of Cp4.1LG02g07830 vs. NCBI nr
Match: gi|593795360|ref|XP_007160718.1| (hypothetical protein PHAVU_001G011200g [Phaseolus vulgaris])

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-06
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 1 

Query: 57  KTVQKLTLAVPIPVVSLDGYTNAGKSTLLNQLAGVEVLAED 98
           K  +   L+VP+PVVSL GYTNAGKSTLLNQL G +VLAED
Sbjct: 316 KQYRSRRLSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAED 356

[Close]
BLAST of Cp4.1LG02g07830 vs. NCBI nr
Match: gi|659133038|ref|XP_008466521.1| (PREDICTED: putative GTP-binding protein 6 isoform X1 [Cucumis melo])

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-06
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 1 

Query: 46  IDGIRVRLDASKTVQKLTLAVPIPVVSLDGYTNAGKSTLLNQLAGVEVLAED 98
           ++ +RV     K  +    +VP+PVVSL GYTNAGKSTLLNQL G EVLAED
Sbjct: 305 LESVRVH---RKQYRSRRFSVPVPVVSLVGYTNAGKSTLLNQLTGAEVLAED 353

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g07830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG02g07830 vs. TrEMBL
Match NameE-valueIdentityDescription
G7I5C6_MEDTR3.0e-0670.73GTP-binding protein HflX OS=Medicago truncatula GN=MTR_1g022980 PE=3 SV=1[more]
A0A103XYP8_CYNCS3.0e-0685.29GTPase HflX OS=Cynara cardunculus var. scolymus GN=Ccrd_022442 PE=3 SV=1[more]
V7CRA0_PHAVU3.0e-0670.73Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G011200g PE=3 SV=1[more]
M0U990_MUSAM3.0e-0656.14Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
A0A076L220_CICAR5.1e-0668.29Peroxidase OS=Cicer arietinum PE=3 SV=1[more]
BLAST of Cp4.1LG02g07830 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57960.11.3e-0865.85 GTP-binding protein, HflX[more]
BLAST of Cp4.1LG02g07830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659133040|ref|XP_008466522.1|4.3e-0659.62PREDICTED: putative GTP-binding protein 6 isoform X2 [Cucumis melo][more]
gi|357438103|ref|XP_003589327.1|4.3e-0670.73GTP-binding protein HflX [Medicago truncatula][more]
gi|976912876|gb|KVH99328.1|4.3e-0685.29GTPase HflX [Cynara cardunculus var. scolymus][more]
gi|593795360|ref|XP_007160718.1|4.3e-0670.73hypothetical protein PHAVU_001G011200g [Phaseolus vulgaris][more]
gi|659133038|ref|XP_008466521.1|4.3e-0659.62PREDICTED: putative GTP-binding protein 6 isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR016496GTPase_HflX
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g07830.1Cp4.1LG02g07830.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016496GTPase HflXPANTHERPTHR10229GTP-BINDING PROTEIN HFLXcoord: 66..97
score: 2.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 54..91
score: 8.
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 41..95
score: 7.1
NoneNo IPR availablePANTHERPTHR10229:SF2GTP BINDING PROTEIN-LIKEcoord: 66..97
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g07830Cucumber (Chinese Long) v2cpecuB539
Cp4.1LG02g07830Cucumber (Chinese Long) v2cpecuB540
Cp4.1LG02g07830Cucumber (Chinese Long) v2cpecuB556
Cp4.1LG02g07830Cucumber (Chinese Long) v2cpecuB585
Cp4.1LG02g07830Bottle gourd (USVL1VR-Ls)cpelsiB436
Cp4.1LG02g07830Bottle gourd (USVL1VR-Ls)cpelsiB439
Cp4.1LG02g07830Bottle gourd (USVL1VR-Ls)cpelsiB462
Cp4.1LG02g07830Bottle gourd (USVL1VR-Ls)cpelsiB477
Cp4.1LG02g07830Watermelon (Charleston Gray)cpewcgB497
Cp4.1LG02g07830Watermelon (Charleston Gray)cpewcgB509
Cp4.1LG02g07830Watermelon (Charleston Gray)cpewcgB528
Cp4.1LG02g07830Watermelon (97103) v1cpewmB541
Cp4.1LG02g07830Watermelon (97103) v1cpewmB559
Cp4.1LG02g07830Watermelon (97103) v1cpewmB577
Cp4.1LG02g07830Melon (DHL92) v3.5.1cpemeB508
Cp4.1LG02g07830Melon (DHL92) v3.5.1cpemeB516
Cp4.1LG02g07830Cucumber (Gy14) v2cgybcpeB224
Cp4.1LG02g07830Cucumber (Gy14) v2cgybcpeB226
Cp4.1LG02g07830Cucumber (Gy14) v2cgybcpeB387
Cp4.1LG02g07830Cucumber (Gy14) v2cgybcpeB823
Cp4.1LG02g07830Melon (DHL92) v3.6.1cpemedB605
Cp4.1LG02g07830Melon (DHL92) v3.6.1cpemedB614
Cp4.1LG02g07830Melon (DHL92) v3.6.1cpemedB649
Cp4.1LG02g07830Silver-seed gourdcarcpeB0153
Cp4.1LG02g07830Silver-seed gourdcarcpeB0265
Cp4.1LG02g07830Silver-seed gourdcarcpeB0566
Cp4.1LG02g07830Silver-seed gourdcarcpeB1066
Cp4.1LG02g07830Silver-seed gourdcarcpeB1309
Cp4.1LG02g07830Silver-seed gourdcarcpeB1362
Cp4.1LG02g07830Cucumber (Chinese Long) v3cpecucB0680
Cp4.1LG02g07830Cucumber (Chinese Long) v3cpecucB0693
Cp4.1LG02g07830Cucumber (Chinese Long) v3cpecucB0724
Cp4.1LG02g07830Wax gourdcpewgoB0694
Cp4.1LG02g07830Wax gourdcpewgoB0729
Cp4.1LG02g07830Cucurbita pepo (Zucchini)cpecpeB091
Cp4.1LG02g07830Cucurbita pepo (Zucchini)cpecpeB125
Cp4.1LG02g07830Cucurbita pepo (Zucchini)cpecpeB301
Cp4.1LG02g07830Cucurbita pepo (Zucchini)cpecpeB415
Cp4.1LG02g07830Cucurbita pepo (Zucchini)cpecpeB459
Cp4.1LG02g07830Cucurbita pepo (Zucchini)cpecpeB471
Cp4.1LG02g07830Cucumber (Gy14) v1cgycpeB0042
Cp4.1LG02g07830Cucumber (Gy14) v1cgycpeB0612
Cp4.1LG02g07830Cucumber (Gy14) v1cgycpeB0885
Cp4.1LG02g07830Cucurbita maxima (Rimu)cmacpeB045
Cp4.1LG02g07830Cucurbita maxima (Rimu)cmacpeB190
Cp4.1LG02g07830Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g07830Cucurbita maxima (Rimu)cmacpeB570
Cp4.1LG02g07830Cucurbita maxima (Rimu)cmacpeB678
Cp4.1LG02g07830Cucurbita maxima (Rimu)cmacpeB780
Cp4.1LG02g07830Cucurbita maxima (Rimu)cmacpeB882
Cp4.1LG02g07830Cucurbita moschata (Rifu)cmocpeB020
Cp4.1LG02g07830Cucurbita moschata (Rifu)cmocpeB166
Cp4.1LG02g07830Cucurbita moschata (Rifu)cmocpeB450
Cp4.1LG02g07830Cucurbita moschata (Rifu)cmocpeB521
Cp4.1LG02g07830Cucurbita moschata (Rifu)cmocpeB632
Cp4.1LG02g07830Cucurbita moschata (Rifu)cmocpeB734
Cp4.1LG02g07830Cucurbita moschata (Rifu)cmocpeB819
Cp4.1LG02g07830Wild cucumber (PI 183967)cpecpiB541
Cp4.1LG02g07830Wild cucumber (PI 183967)cpecpiB542
Cp4.1LG02g07830Wild cucumber (PI 183967)cpecpiB586
Cp4.1LG02g07830Wild cucumber (PI 183967)cpecpiB558