Cp4.1LG02g05040 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG02g05040
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSerine--tRNA ligase
LocationCp4.1LG02 : 1989844 .. 1993441 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTAATTTATTTTCAATTCATCTCCTCGTTTCTCCCTCGAAGATGAAGATAATTGAGGCAAGGGCAGCCATCCGCTACTTTCATACCTTCCCGCCGAGCAAAAGCTTCCTCAGAGCTCCAACAATGGGATTCCATTCCTCATTCAGCGTCACATCTTTGAAAACCCTTAAGGTCGCCGCCTTTCCGACGACTTCCCGTCTTATTTTCAGGCTACCTACCAAAACTGCTTCTCTCAATTCTCTTCATCCTTGTTTCCGTAACCGGAAACCTCCATGTCCATTGCTTGTTCGAGCCCTCTCATTTTCGGAAGTCCAAGTCGATCCTCCAACTGCAACCGCCGGAGAAGAAATAGGTATTTTCATTGTCTCATATTGTTATTTTGTTGTTAACATGGTGATTGATTACTCCAATTTACTTTGTGAGAAAATGAGTGTTTGATGTTGTTATTGTTCTGTTCTTGGATTGGATTAGTTGCGAAGCCTCAATGGAAAGCTTCGATAGATTTCAAGTGGATTAGGGATAACAAGGATTTGGTGGCTGCAAATATAGAGAATCGGAAGTCTGGTGCCAATTTGGAACTTGTGCTCCAACTGTATGACAAAATGCTAAATCTTCAGAAGGTTAGATTTTGATTTTTTTGATTTTTTTTTTTTGTTACTTTTTGTTACTTTTCTTTTCTGTAATAGTTCTTGCACCATTGTAGCTGCATTATAATGTGTATTGATATTTTCATCAAATTTTTTGTTGCCCAACTATACACGAGGACAGACTATCAAACTAGTTTTTCGCCACTTTAAATCAATGCTTAGCTAATTGTTACTCACAGAGATCAGGAAGTTGAGCGGCTTCGTGCTGAAAGGAACATGGTTGCAAACAAGATGAAAGGGAAGCTGGAACCATCTGAGCGACAAAAACTCATAGAGGAAGGTACATACATTTTTCGAACACGTCATTAGCTTCATTTTCAATTTCCGTGTTATCGAATTCACTTTGGTGTTCTCTTTCCAGGAAAAAATTTGAAGGAAGGATTGGTTTCTTTGGAAGAAAACCTTCTTAAACTAACAGACCAGCTTCAACAAGAAGCACAATGCATACCAAACATCACCCATCCCGATGTTCCAATCGGAGGGGAGGACTGCTCGATAATAAGAAAGACGGTATTTCTGCTTTTCACAACTCTTTATTATATTTCCTAACCCCAATTCTTCTGGATGTTGTGTTTTATGTCCTGCATTCTCTCTTGTAGGTCGGTAGCCCAAGAGAGTTCGGTTTTTCTGTTAAAGATCATCTTGAACTTGGGAAGCAGCTAAACCTTTTTGATTTTGATGCTGCTGCTGAGGTACAATCCTTGTTCAATTTAAGATACCCAAGAGGAGTTACTAGTTCACCTTGTCATGTATATTTGGAATGTTTTACGAAGAAAGCTATTGTTTTGACTTTAAATCTTCACAAAACATTCTCTCTATCTTATTTTTGGTTAATGCTTATCATTCTATGTTATAAATTGGAATCGTTTATCGGACTTTGCAACTTTTGTTTAGTTTGAGAAATCCAATCCATGATCTATAACTCTGCTTAGTCCTATTTCGAACTTTTATTAGTTCAATAAATTTATGGTAGTGGGAACTGCCTTATTGTAATGTTGCTGTGGCTTATACAGGTCAGTGGATCTAAGTTCTATTACCTAAAAAATGCTGCAGTAACCTTGGAAATGGGTCTAATCAGCTGGACACTCTCAGAAGTAATGAAAAGGGGCTTTACTCCTGTGATAACCCCAGAAATTGTGAGGTCCTCAGTTGTTGAGAAGTGTGGATTTCAACCTCGTGGTGAAAATACTCAGGTTTTGCAACTTTTCTCTAACCCCTTCTCGGTTTTTGTATTTTTAACGTACCATGCAGAGAAAGTTAAAGCAATAATCTCCGAGGTGTTTGACTGCTAGTTTCATCGTTTTGAGATAACTTCTCAGTCAACCTTGTATATTTTGAACTTCTATTGAGTCGTATTGAGATGCTACTTGTTTTCAAGGCCTTAGACTTAGATGTTGAGCAGAGTATAGACTTGACCATTGCAGACATGACCCAGGGAGTAAAACGTTTGAATAGAATGAGAGGTGTCCTTTATTTGTAAGAGTGTTTAATTTCCATCTTTCCATACTCACTTGTGCTTGGCAGGTTTATTCTATTGAGGGAAGTGACCAGTGCCTCATCGGTACTGCAGAGATTCCTGTAGGGGGAATTCACATGGATTCTATCCTTGCTGAGTCTTCACTACCTTTGAAGTATGTTGCTTATTCTCATTGCTTTCGAACCGAGGCAGGTGCTGCTGGAGCCGCAACCAGGTACAGGCCGACATGCTTCCTAGACTGTTTTCTTTTCTCTCAATGACTATCTTATATAATGAATCTCTTTCCTAAATCAACACCTTTAAGGCTGTGATTCCACTGTCGTTTGATAACTTCATCTCCTTATAAATGAACAACCTGTGAACCTGCGTCACATCGTTTATAGCACTCTTGTTATTACTATTGATGTATGTTCTCTATCAAGTGTTTGATATATAAATATAATGCTGAGCAGGGGCCTGTATCGAGTCCACCAGTTCAGCAAGGTAGAAATGTTTATATTATGTCGACCTGAAGATAGCGAGTCCTACCTCGAAGAACTCATTAGTATTGAAGAGGACCTTTTCACATCACTGGGATTGCATTTCAAGTGAGAACCTGCATTTATTTGGGTTTTAGTTATCTTTATTGTCACTGTATTGTTTGAATAACACCTGTTTTCGGTTGCCCCATTTCATTTCAATGTCTCCTCTTTGCAGGACCTTGGATATGGCTTCCGGAGATTTAGGTGCACCAGCTTATCGAAAATTTGACGTGGAGGCATGGATGCCAGGTCTAGGACGGTACGGTGAGGTACTCGTTTCTCCTACTCTCTGCGGTTGGGGTACGATTAGAGTTAAATTGTCTTATACTTATACATCCTATCCTGTCCACAACAGATATCAAGTGCATCAAATTGTACCGACTACCAAAGCCGCAGATTAGGAATCCGATATCGTCCACAAGAACTGATACCAACAACATCAAAGAAGAAGAATAAAGGCAATCTGGCGCCCACACAGTTCGTTCACACACTGAATGCAACAGCTTGTGCAGTGCCAAGAATGATTGTTTGCTTGCTTGAGAATTATCAGCAGGAGGATGGCTCTGTGATTATTCCTGAGCCATTGAGGCCTTTCATGGGCGGACTAGAGATTATTGCTCCCACATCCACATAGTGTCCTGAGTTTCCCAAAAGTTTCAATTTTTGCAGCACACAGCCTATTTATGGTGAAAGAGTGAGGAATTGAAAGAAATTCATGCTGGCCACGGATCATCCAATAAATCTCCCATCTTAGTTCTCCCATTTCTGGTACTTAGCTAATTGGTTTCCACATTAAAATATTGAGATATGTGTAGCTTAAAATGTTTTAAGTTATTGCAGCTGATTACTACATTATATTTGACCATTTGGTTGGCTTTTAAGCACTTGACTCTTATTTACAGTTTCCTTAGAGTAGTTTCTTCTAAACATAGCCATATATTTGACGTTGTGT

mRNA sequence

TTTTAATTTATTTTCAATTCATCTCCTCGTTTCTCCCTCGAAGATGAAGATAATTGAGGCAAGGGCAGCCATCCGCTACTTTCATACCTTCCCGCCGAGCAAAAGCTTCCTCAGAGCTCCAACAATGGGATTCCATTCCTCATTCAGCGTCACATCTTTGAAAACCCTTAAGGTCGCCGCCTTTCCGACGACTTCCCGTCTTATTTTCAGGCTACCTACCAAAACTGCTTCTCTCAATTCTCTTCATCCTTGTTTCCGTAACCGGAAACCTCCATGTCCATTGCTTGTTCGAGCCCTCTCATTTTCGGAAGTCCAAGTCGATCCTCCAACTGCAACCGCCGGAGAAGAAATAGTTGCGAAGCCTCAATGGAAAGCTTCGATAGATTTCAAGTGGATTAGGGATAACAAGGATTTGGTGGCTGCAAATATAGAGAATCGGAAGTCTGGTGCCAATTTGGAACTTGTGCTCCAACTGTATGACAAAATGCTAAATCTTCAGAAGGAAGTTGAGCGGCTTCGTGCTGAAAGGAACATGGTTGCAAACAAGATGAAAGGGAAGCTGGAACCATCTGAGCGACAAAAACTCATAGAGGAAGGAAAAAATTTGAAGGAAGGATTGGTTTCTTTGGAAGAAAACCTTCTTAAACTAACAGACCAGCTTCAACAAGAAGCACAATGCATACCAAACATCACCCATCCCGATGTTCCAATCGGAGGGGAGGACTGCTCGATAATAAGAAAGACGGTCGGTAGCCCAAGAGAGTTCGGTTTTTCTGTTAAAGATCATCTTGAACTTGGGAAGCAGCTAAACCTTTTTGATTTTGATGCTGCTGCTGAGGTCAGTGGATCTAAGTTCTATTACCTAAAAAATGCTGCAGTAACCTTGGAAATGGGTCTAATCAGCTGGACACTCTCAGAAGTAATGAAAAGGGGCTTTACTCCTGTGATAACCCCAGAAATTGTGAGGTCCTCAGTTGTTGAGAAGTGTGGATTTCAACCTCGTGGTGAAAATACTCAGGTTTATTCTATTGAGGGAAGTGACCAGTGCCTCATCGGTACTGCAGAGATTCCTGTAGGGGGAATTCACATGGATTCTATCCTTGCTGAGTCTTCACTACCTTTGAAGTATGTTGCTTATTCTCATTGCTTTCGAACCGAGGCAGGTGCTGCTGGAGCCGCAACCAGGGGCCTGTATCGAGTCCACCAGTTCAGCAAGGTAGAAATGTTTATATTATGTCGACCTGAAGATAGCGAGTCCTACCTCGAAGAACTCATTAGTATTGAAGAGGACCTTTTCACATCACTGGGATTGCATTTCAAGACCTTGGATATGGCTTCCGGAGATTTAGGTGCACCAGCTTATCGAAAATTTGACGTGGAGGCATGGATGCCAGGTCTAGGACGGTACGGTGAGATATCAAGTGCATCAAATTGTACCGACTACCAAAGCCGCAGATTAGGAATCCGATATCGTCCACAAGAACTGATACCAACAACATCAAAGAAGAAGAATAAAGGCAATCTGGCGCCCACACAGTTCGTTCACACACTGAATGCAACAGCTTGTGCAGTGCCAAGAATGATTGTTTGCTTGCTTGAGAATTATCAGCAGGAGGATGGCTCTGTGATTATTCCTGAGCCATTGAGGCCTTTCATGGGCGGACTAGAGATTATTGCTCCCACATCCACATAGTGTCCTGAGTTTCCCAAAAGTTTCAATTTTTGCAGCACACAGCCTATTTATGGTGAAAGAGTGAGGAATTGAAAGAAATTCATGCTGGCCACGGATCATCCAATAAATCTCCCATCTTAGTTCTCCCATTTCTGGTACTTAGCTAATTGGTTTCCACATTAAAATATTGAGATATGTGTAGCTTAAAATGTTTTAAGTTATTGCAGCTGATTACTACATTATATTTGACCATTTGGTTGGCTTTTAAGCACTTGACTCTTATTTACAGTTTCCTTAGAGTAGTTTCTTCTAAACATAGCCATATATTTGACGTTGTGT

Coding sequence (CDS)

ATGAAGATAATTGAGGCAAGGGCAGCCATCCGCTACTTTCATACCTTCCCGCCGAGCAAAAGCTTCCTCAGAGCTCCAACAATGGGATTCCATTCCTCATTCAGCGTCACATCTTTGAAAACCCTTAAGGTCGCCGCCTTTCCGACGACTTCCCGTCTTATTTTCAGGCTACCTACCAAAACTGCTTCTCTCAATTCTCTTCATCCTTGTTTCCGTAACCGGAAACCTCCATGTCCATTGCTTGTTCGAGCCCTCTCATTTTCGGAAGTCCAAGTCGATCCTCCAACTGCAACCGCCGGAGAAGAAATAGTTGCGAAGCCTCAATGGAAAGCTTCGATAGATTTCAAGTGGATTAGGGATAACAAGGATTTGGTGGCTGCAAATATAGAGAATCGGAAGTCTGGTGCCAATTTGGAACTTGTGCTCCAACTGTATGACAAAATGCTAAATCTTCAGAAGGAAGTTGAGCGGCTTCGTGCTGAAAGGAACATGGTTGCAAACAAGATGAAAGGGAAGCTGGAACCATCTGAGCGACAAAAACTCATAGAGGAAGGAAAAAATTTGAAGGAAGGATTGGTTTCTTTGGAAGAAAACCTTCTTAAACTAACAGACCAGCTTCAACAAGAAGCACAATGCATACCAAACATCACCCATCCCGATGTTCCAATCGGAGGGGAGGACTGCTCGATAATAAGAAAGACGGTCGGTAGCCCAAGAGAGTTCGGTTTTTCTGTTAAAGATCATCTTGAACTTGGGAAGCAGCTAAACCTTTTTGATTTTGATGCTGCTGCTGAGGTCAGTGGATCTAAGTTCTATTACCTAAAAAATGCTGCAGTAACCTTGGAAATGGGTCTAATCAGCTGGACACTCTCAGAAGTAATGAAAAGGGGCTTTACTCCTGTGATAACCCCAGAAATTGTGAGGTCCTCAGTTGTTGAGAAGTGTGGATTTCAACCTCGTGGTGAAAATACTCAGGTTTATTCTATTGAGGGAAGTGACCAGTGCCTCATCGGTACTGCAGAGATTCCTGTAGGGGGAATTCACATGGATTCTATCCTTGCTGAGTCTTCACTACCTTTGAAGTATGTTGCTTATTCTCATTGCTTTCGAACCGAGGCAGGTGCTGCTGGAGCCGCAACCAGGGGCCTGTATCGAGTCCACCAGTTCAGCAAGGTAGAAATGTTTATATTATGTCGACCTGAAGATAGCGAGTCCTACCTCGAAGAACTCATTAGTATTGAAGAGGACCTTTTCACATCACTGGGATTGCATTTCAAGACCTTGGATATGGCTTCCGGAGATTTAGGTGCACCAGCTTATCGAAAATTTGACGTGGAGGCATGGATGCCAGGTCTAGGACGGTACGGTGAGATATCAAGTGCATCAAATTGTACCGACTACCAAAGCCGCAGATTAGGAATCCGATATCGTCCACAAGAACTGATACCAACAACATCAAAGAAGAAGAATAAAGGCAATCTGGCGCCCACACAGTTCGTTCACACACTGAATGCAACAGCTTGTGCAGTGCCAAGAATGATTGTTTGCTTGCTTGAGAATTATCAGCAGGAGGATGGCTCTGTGATTATTCCTGAGCCATTGAGGCCTTTCATGGGCGGACTAGAGATTATTGCTCCCACATCCACATAG

Protein sequence

MKIIEARAAIRYFHTFPPSKSFLRAPTMGFHSSFSVTSLKTLKVAAFPTTSRLIFRLPTKTASLNSLHPCFRNRKPPCPLLVRALSFSEVQVDPPTATAGEEIVAKPQWKASIDFKWIRDNKDLVAANIENRKSGANLELVLQLYDKMLNLQKEVERLRAERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNITHPDVPIGGEDCSIIRKTVGSPREFGFSVKDHLELGKQLNLFDFDAAAEVSGSKFYYLKNAAVTLEMGLISWTLSEVMKRGFTPVITPEIVRSSVVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIHMDSILAESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCRPEDSESYLEELISIEEDLFTSLGLHFKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQELIPTTSKKKNKGNLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGSVIIPEPLRPFMGGLEIIAPTST
BLAST of Cp4.1LG02g05040 vs. Swiss-Prot
Match: SYSM_ARATH (Serine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA7 PE=2 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 8.4e-216
Identity = 378/507 (74.56%), Postives = 430/507 (84.81%), Query Frame = 1

Query: 45  AAFPTT--SRLIFRLPTKTASLN--SLHPCFRNRKPPCPLLVRALSFSE-VQVDPPTATA 104
           AA P T  SRL  +  T T +L   S H   RN+    PLLVRA S S  VQ  P T T+
Sbjct: 10  AAVPVTFSSRLFLKPFTNTLTLGLFSRHLQPRNK----PLLVRAFSASAAVQDIPATQTS 69

Query: 105 GEEIVAKPQWKASIDFKWIRDNKDLVAANIENRKSGANLELVLQLYDKMLNLQKEVERLR 164
              + A+P WKA+IDFKWIRDNK+ V  NI NR S ANLE VLQLY+ M+NLQKEVERLR
Sbjct: 70  DSSVAARPLWKAAIDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEVERLR 129

Query: 165 AERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNITHP 224
            ERN VA KMKGKLEPSER++L+EEGKNLKE LV+LEE+L+KL D+LQ  AQ IPN+THP
Sbjct: 130 EERNNVAKKMKGKLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMTHP 189

Query: 225 DVPIGGEDCSIIRKTVGSPREFGFSVKDHLELGKQLNLFDFDAAAEVSGSKFYYLKNAAV 284
           DVP+GGED S IR+ VGSPREF F +KDHL+LGK L+L DFD+AAEVSGSKF+YLKN AV
Sbjct: 190 DVPVGGEDSSAIRQEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAV 249

Query: 285 TLEMGLISWTLSEVMKRGFTPVITPEIVRSSVVEKCGFQPRGENTQVYSIEGSDQCLIGT 344
            LEM L++WTLS+VMK+G+TP+ TPEIVRSS+VEKCGFQPRG+NTQVYSI+G+DQCLIGT
Sbjct: 250 LLEMALLNWTLSQVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGTDQCLIGT 309

Query: 345 AEIPVGGIHMDSILAESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCR 404
           AEIPVGGIHMDSIL ES+LPLKY+A+SHCFRTEAGAAGAAT+GLYRVHQFSK EMF++C+
Sbjct: 310 AEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMFVICQ 369

Query: 405 PEDSESYLEELISIEEDLFTSLGLHFKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEIS 464
           PEDSES+ +ELI IEEDLFTSLGLHFKTLDMA+ DLGAPAYRKFD+EAWMPGLGR+GEIS
Sbjct: 370 PEDSESFHQELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMPGLGRFGEIS 429

Query: 465 SASNCTDYQSRRLGIRYRPQELIPTTSKKKNKGNLAPTQFVHTLNATACAVPRMIVCLLE 524
           SASNCTDYQSRRLGIRYRP E  P T  KK K NL  T+FVHTLNATACAVPRM+VCLLE
Sbjct: 430 SASNCTDYQSRRLGIRYRPSE-PPQTGPKKGKANLPATKFVHTLNATACAVPRMMVCLLE 489

Query: 525 NYQQEDGSVIIPEPLRPFMGGLEIIAP 547
           NYQQEDGSV+IPEPLRPFMGG+E+I P
Sbjct: 490 NYQQEDGSVVIPEPLRPFMGGIELIKP 511

BLAST of Cp4.1LG02g05040 vs. Swiss-Prot
Match: SYS_TREDE (Serine--tRNA ligase OS=Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222) GN=serS PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 9.9e-116
Identity = 209/430 (48.60%), Postives = 287/430 (66.74%), Query Frame = 1

Query: 113 IDFKWIRDNKDLVAANIENRKSGANLELVLQLYDKMLNLQKEVERLRAERNMVANKMKGK 172
           +D+K+I++N + V  NI+NR   A+ +  ++LYDK   L   ++ L+ +RN  +  MK K
Sbjct: 2   LDYKFIKENVEAVKQNIKNRHMNADADKAVELYDKRTALVTSLQNLQKDRNDNSQSMKQK 61

Query: 173 LEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNITHPDVPIGGEDCSIIR 232
           L P ERQKL+++GK +KE +  +E  L +    L +    IPN+ HP+ P+G ED   + 
Sbjct: 62  LSPEERQKLVDQGKAIKEKIAQVEAELAEAEKALHEAVSKIPNMAHPEAPVGKEDSDNLE 121

Query: 233 -KTVGSPREFGFSVKDHLELGKQLNLFDFDAAAEVSGSKFYYLKNAAVTLEMGLISWTLS 292
            K  G+  +F F  KDH++LG+ L+L DF+A  +VSG KFY+LKN AV LE  L  + L+
Sbjct: 122 VKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTMYGLN 181

Query: 293 EVMKRGFTPVITPEIVRSSVVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIHMDS 352
            + K GF P ITP+I +  ++   GF PRGE + VYS+EG   CL+ TAEI +GG H D 
Sbjct: 182 ILRKHGFKPFITPDIAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGGYHSDE 241

Query: 353 ILAESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCRPEDSESYLEELI 412
           I+ + SLPLKY   SHCFR EAGAAG  ++GLYRVHQFSK+EMF+ C PE+S++  EEL 
Sbjct: 242 IIKKESLPLKYCGLSHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDALHEELR 301

Query: 413 SIEEDLFTSLGLHFKTLDMASGDLGAPAYRKFDVEAWMPGL--GRYGEISSASNCTDYQS 472
            IEE++F  LG+ F+ +D  +GDLGAPAYRK+D+EAWMPG   G +GE++S SNCTDYQ+
Sbjct: 302 LIEEEIFNGLGIPFRVVDTCTGDLGAPAYRKWDLEAWMPGRNGGEWGEVTSTSNCTDYQA 361

Query: 473 RRLGIRYRPQELIPTTSKKKNKGNLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGSVI 532
           RRL IRY+  +        KNK       F+HTLN TA A+ R ++ +LENYQQ DGS+ 
Sbjct: 362 RRLNIRYKDDD-------GKNK-------FLHTLNGTALAMSRAMIAVLENYQQADGSIK 417

Query: 533 IPEPLRPFMG 540
           IPE L P+ G
Sbjct: 422 IPEALVPYCG 417

BLAST of Cp4.1LG02g05040 vs. Swiss-Prot
Match: SYS_RUBXD (Serine--tRNA ligase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=serS PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 6.8e-109
Identity = 204/435 (46.90%), Postives = 289/435 (66.44%), Query Frame = 1

Query: 113 IDFKWIRDNKDLVAANIENRKSGANLELVLQLYDKMLNLQKEVERLRAERNMVANKMKGK 172
           +D ++IR+N + V  N  +R   A+++LV++L D+   L +E+E LRA +N +A  +  +
Sbjct: 2   LDLRYIRENAEAVKKNCRDRGVEADVDLVVELADRRSALIRELEGLRARQNQLAKAVAKE 61

Query: 173 LEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNITHPDVPIGGEDCSIIR 232
            +   R +LIEE + LK  +   EE L  + ++L +E   IPN+THP+ P+G +D   + 
Sbjct: 62  RDERSRGRLIEESRELKGLIPRREEELRGVEERLAEEQLKIPNMTHPEAPVGRDDSENVE 121

Query: 233 -KTVGSPREFGFSVKDHLELGKQLNLFDFDAAAEVSGSKFYYLKNAAVTLEMGLISWTLS 292
            +  G   EFGF  KDH+ELG+ L + DFDA A+ +GSKFY+L+  AV LE+GL+ + L 
Sbjct: 122 IRRWGEAPEFGFEPKDHVELGEALGIIDFDAGAKTTGSKFYFLRGEAVLLELGLVRFALD 181

Query: 293 EVMKRGFTPVITPEIVRSSVVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIHMDS 352
            +  RG+   +TP++ R  ++   GF PRG  TQ+YS+E +D  LI TAEI + G  +D 
Sbjct: 182 LLAGRGYELAMTPDLARDRMLLGTGFVPRGPETQIYSVENTDLSLIATAEITLAGQLVDE 241

Query: 353 ILAESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCRPEDSESYLEELI 412
           I+AE SLP ++   SHCFRTEAGA G A+RGLYRVHQF+KVEMF    PE S    EE++
Sbjct: 242 IVAEESLPRRFAGLSHCFRTEAGAHGRASRGLYRVHQFTKVEMFAFTTPEQSGEMHEEML 301

Query: 413 SIEEDLFTSLGLHFKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRR 472
           SIEE++F +L + ++ +D+ +GDLGA AYRK+DVEAWMPG G YGE++S SN TDYQ+RR
Sbjct: 302 SIEEEIFRTLEIPYRVVDICTGDLGAAAYRKYDVEAWMPGRGDYGEVTSTSNTTDYQARR 361

Query: 473 LGIRYRPQELIPTTSKKKNKGNLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGSVIIP 532
           LGIRYRP+   P              + +HTLN TA AV R ++ LLEN+Q+EDGSV +P
Sbjct: 362 LGIRYRPEGGRP--------------RLLHTLNGTAIAVSRTMIALLENHQREDGSVALP 421

Query: 533 EPLRPFMGGLEIIAP 547
           E L P++ G E+I P
Sbjct: 422 EALVPYV-GREVIGP 421

BLAST of Cp4.1LG02g05040 vs. Swiss-Prot
Match: SYS_BORDL (Serine--tRNA ligase OS=Borrelia duttonii (strain Ly) GN=serS PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 2.4e-106
Identity = 207/438 (47.26%), Postives = 283/438 (64.61%), Query Frame = 1

Query: 113 IDFKWIRDNKDLVAANIENRKSGANLELVLQLYDKMLNLQKEVERLRAERNMVANKMKGK 172
           +D K+IRDN +LV  NI+NR     L+L++   D+   L  ++  L A RN  AN MK  
Sbjct: 2   LDLKFIRDNLELVRENIKNRGLKLELDLLISFDDERRKLITKIGELNALRNENANAMKDN 61

Query: 173 LEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNITHPDVPIG-GEDCSII 232
           ++ S R  LIE+GK LK  ++ LEE L  LT +L  E + IPNI+ PDVP+G  ED +++
Sbjct: 62  IDDSSRHYLIEKGKALKAEIMDLEERLGYLTSRLLVEHKRIPNISAPDVPVGVSEDENVV 121

Query: 233 RKTVGSPREFGFSVKDHLELGKQLNLFDFDAAAEVSGSKFYYLKNAAVTLEMGLISWTLS 292
            K  G+  +F F  KDHLE+G  L+LFDF+ A EVSG+KFYYLKN AV LE+ +I++  S
Sbjct: 122 LKVSGNIPKFDFKPKDHLEIGIHLDLFDFEKAREVSGNKFYYLKNEAVFLELAMINFAFS 181

Query: 293 EVMKRGFTPVITPEIVRSSVVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIHMDS 352
           ++  +GF   ITP++ R  +V+  GF PRG  + +Y IE +D+ L+GTAEI +GG + ++
Sbjct: 182 KLKAKGFDLFITPDVAREFIVDGIGFNPRGAESNIYKIEDTDKYLVGTAEITLGGYYYNT 241

Query: 353 ILAESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCRPEDSESYLEELI 412
           IL   S PLK    SHCFR EAGAAG  ++GLYRVHQFSKVEMF  CR EDS+    E +
Sbjct: 242 ILDLKS-PLKMAGLSHCFRKEAGAAGQFSKGLYRVHQFSKVEMFCFCRSEDSDRIHNEFL 301

Query: 413 SIEEDLFTSLGLHFKTLDMASGDLGAPAYRKFDVEAWMPGLGR---YGEISSASNCTDYQ 472
            +EE++FT L + ++ L++ S DLGAPAY+K+D+EAWMPG G    YGE++S SNCTDYQ
Sbjct: 302 ELEEEIFTELEIPYRVLNVCSSDLGAPAYKKYDIEAWMPGRGENGDYGEVTSTSNCTDYQ 361

Query: 473 SRRLGIRYRPQELIPTTSKKKNKGNLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGSV 532
           SRRL IRY+                    +FVH +N TA A  R ++ +LEN+Q   G V
Sbjct: 362 SRRLKIRYKED---------------GQNKFVHMINGTAIASTRTLIAILENFQDAKGGV 421

Query: 533 IIPEPLRPFMGGLEIIAP 547
            IP+ L  +  G + I+P
Sbjct: 422 RIPKSLVKYT-GFDYISP 422

BLAST of Cp4.1LG02g05040 vs. Swiss-Prot
Match: SYS_DICT6 (Serine--tRNA ligase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=serS PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 9.2e-106
Identity = 200/435 (45.98%), Postives = 282/435 (64.83%), Query Frame = 1

Query: 113 IDFKWIRDNKDLVAANIENRKSGAN---LELVLQLYDKMLNLQKEVERLRAERNMVANKM 172
           ID K +R+N +L+  NI  R    N   ++ +L+L  K  +LQKE++ L+A+RN ++ ++
Sbjct: 2   IDIKVLRENPELMKENIVLRNLDPNKYDVDYILELDAKRRSLQKELDTLKAQRNKISQEI 61

Query: 173 KGKLEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNITHPDVPIGGEDCS 232
            GK +  ER++LI++ K LKE +  LE+   K+  +L  +   +PN   P  P G ++  
Sbjct: 62  -GKRKGEEREELIKKAKTLKEKIEELEKEYEKIEKELYLKLWQLPNFLSPKAPKGKDEKD 121

Query: 233 IIR-KTVGSPREFGFSVKDHLELGKQLNLFDFDAAAEVSGSKFYYLKNAAVTLEMGLISW 292
            I  K  G+ + F F+ KDHL+L    +L DF+  ++V+GS FYYLKN AV LE  L   
Sbjct: 122 NIEIKRWGNIKTFTFTPKDHLDLALLNDLVDFERGSKVTGSNFYYLKNEAVLLEFALFRL 181

Query: 293 TLSEVMKRGFTPVITPEIVRSSVVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIH 352
            +  ++  GF   ITP++ R  +++  GFQPRG   Q+Y +E +D  LI TAEI +GG H
Sbjct: 182 VIDTLLPEGFKLFITPDLARMEIIDGIGFQPRGPEAQIYRVEDTDLGLIATAEITLGGYH 241

Query: 353 MDSILAESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCRPEDSESYLE 412
            D IL E  LPLKY+ +SHCFRTEAGA G   RGLYRVHQFSK E+FI+CRPEDSE   E
Sbjct: 242 KDEILDELDLPLKYLGFSHCFRTEAGAYGRYNRGLYRVHQFSKAEIFIICRPEDSEEMHE 301

Query: 413 ELISIEEDLFTSLGLHFKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQ 472
            ++S+EE +F  L + ++ +D+ SGDLGAPA RKFD+EAWMPG G +GE++S SNCTDYQ
Sbjct: 302 YILSLEEKIFQKLEIPYRVVDICSGDLGAPAARKFDIEAWMPGRGDFGEVTSCSNCTDYQ 361

Query: 473 SRRLGIRYRPQELIPTTSKKKNKGNLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGSV 532
           +RRL IR+R                    ++VH LN TA A+ R ++ +LENYQQEDGS+
Sbjct: 362 ARRLNIRFRRV--------------TGEVEYVHMLNGTAIAISRALIAILENYQQEDGSI 421

Query: 533 IIPEPLRPFMGGLEI 544
           +IP+ L+P++G  EI
Sbjct: 422 LIPKVLQPYIGISEI 421

BLAST of Cp4.1LG02g05040 vs. TrEMBL
Match: A0A0A0LHK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889830 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 8.9e-265
Identity = 468/549 (85.25%), Postives = 497/549 (90.53%), Query Frame = 1

Query: 3   IIEARAAIRYFHTFPPSKSFLRAPTMGFHSSFSVTSLKTLKVAAFP--TTSRLIFRLPTK 62
           I+  R AIR+FH+FPPS +F +A TMGF         +TLK+ AFP  +TSRL+   PTK
Sbjct: 5   IMGERGAIRHFHSFPPSHTFPKASTMGF---------QTLKLPAFPASSTSRLMVLPPTK 64

Query: 63  TASLNSLHPCFRNRKPPCPLLVRALSFSEVQVD-PPTATAGEEIVAKPQWKASIDFKWIR 122
           T SL SLHPC R  +PP  LLVRA S   V+ D PP+  AGEE V KPQWKASIDFKWIR
Sbjct: 65  TPSLTSLHPCVRTHRPPSRLLVRAFSLPSVEFDHPPSTIAGEEKVVKPQWKASIDFKWIR 124

Query: 123 DNKDLVAANIENRKSGANLELVLQLYDKMLNLQKEVERLRAERNMVANKMKGKLEPSERQ 182
           DNKDLVA+NI+NRKSGANLELVLQLYDKMLNLQKEVE+LRAERNMVANKMKGKLEPSERQ
Sbjct: 125 DNKDLVASNIQNRKSGANLELVLQLYDKMLNLQKEVEQLRAERNMVANKMKGKLEPSERQ 184

Query: 183 KLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNITHPDVPIGGEDCSIIRKTVGSPR 242
           KLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPN THPDVPIGGEDCSIIRK VGSPR
Sbjct: 185 KLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNTTHPDVPIGGEDCSIIRKMVGSPR 244

Query: 243 EFGFSVKDHLELGKQLNLFDFDAAAEVSGSKFYYLKNAAVTLEMGLISWTLSEVMKRGFT 302
           EF F VKDHLELGKQL++FDFDAAAEVSGSKFYYLKNAAVTLE+GLI+WTLSEVMKRGFT
Sbjct: 245 EFSFPVKDHLELGKQLDIFDFDAAAEVSGSKFYYLKNAAVTLELGLINWTLSEVMKRGFT 304

Query: 303 PVITPEIVRSSVVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIHMDSILAESSLP 362
           P+ITPEIVRS+VVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIHMDSIL+ESSLP
Sbjct: 305 PLITPEIVRSTVVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIHMDSILSESSLP 364

Query: 363 LKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCRPEDSESYLEELISIEEDLFT 422
           LKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFI CRPE+SESY EELI IEEDLF+
Sbjct: 365 LKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESESYHEELIRIEEDLFS 424

Query: 423 SLGLHFKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQ 482
           SLGLHFKTLDMAS DLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQ
Sbjct: 425 SLGLHFKTLDMASADLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQ 484

Query: 483 ELIPTTSKKKNKGNLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGSVIIPEPLRPFMG 542
           E +P+T  KK KGNLAPTQFVHTLNATACAVPRM+VCLLENYQQEDGSVIIPEPLRPFMG
Sbjct: 485 EQVPST-LKKGKGNLAPTQFVHTLNATACAVPRMMVCLLENYQQEDGSVIIPEPLRPFMG 543

Query: 543 GLEIIAPTS 549
           GL+ I+P S
Sbjct: 545 GLDRISPAS 543

BLAST of Cp4.1LG02g05040 vs. TrEMBL
Match: A0A067KZ22_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15824 PE=4 SV=1)

HSP 1 Score: 816.6 bits (2108), Expect = 1.8e-233
Identity = 412/507 (81.26%), Postives = 452/507 (89.15%), Query Frame = 1

Query: 44  VAAFPTTSRLIFRLP-TKTASLNSLHPCFRN---RKPPCPLLVRALSFSEVQVDPPTATA 103
           + A  ++SR IF  P +KT +LNS+   ++N   ++PP  LL RALS + VQ   PT + 
Sbjct: 4   IPASSSSSRFIFTKPMSKTLTLNSISLRYKNNFLKRPPFTLLTRALSATAVQEALPTESI 63

Query: 104 GEEIVAKPQWKASIDFKWIRDNKDLVAANIENRKSGANLELVLQLYDKMLNLQKEVERLR 163
             + V KPQWKA+IDFKWIRDNKD VA NI+NR S ANLELVL+LY+KML +QKEVERLR
Sbjct: 64  DNKSVVKPQWKAAIDFKWIRDNKDAVALNIKNRNSNANLELVLELYEKMLAVQKEVERLR 123

Query: 164 AERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNITHP 223
            ERN VANKMKGKLEPSERQKLIEEGKNLKEGLVSLEE+LLKLTD+LQQEAQCIPN+THP
Sbjct: 124 GERNFVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEEDLLKLTDELQQEAQCIPNMTHP 183

Query: 224 DVPIGGEDCSIIRKTVGSPREFGFSVKDHLELGKQLNLFDFDAAAEVSGSKFYYLKNAAV 283
           DVPIG EDCS +RKTVGSPREF F VKDHL+LGK+L+LFDFDAAAEVSGSKFYYLKN AV
Sbjct: 184 DVPIGVEDCSTVRKTVGSPREFSFPVKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAV 243

Query: 284 TLEMGLISWTLSEVMKRGFTPVITPEIVRSSVVEKCGFQPRGENTQVYSIEGSDQCLIGT 343
            LEM LI+WTLSEVMKRGF P+ TPE+VRSSVVEKCGFQPRG+NTQVYS+EGSDQCLIGT
Sbjct: 244 MLEMALINWTLSEVMKRGFMPLTTPELVRSSVVEKCGFQPRGDNTQVYSVEGSDQCLIGT 303

Query: 344 AEIPVGGIHMDSILAESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCR 403
           AEIPVGGIHMDSIL ES LPLKYVA+SHCFRTEAGAAG ATRGLYRVHQFSKVEMFILC+
Sbjct: 304 AEIPVGGIHMDSILTESMLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSKVEMFILCQ 363

Query: 404 PEDSESYLEELISIEEDLFTSLGLHFKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEIS 463
           PE+SESY +ELI IEEDLF+SLGLH+KTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEIS
Sbjct: 364 PEESESYHQELIKIEEDLFSSLGLHYKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEIS 423

Query: 464 SASNCTDYQSRRLGIRYRPQELIPT-TSKKKNKGNLAPTQFVHTLNATACAVPRMIVCLL 523
           SASNCTDYQSRRLGIRYRP E  PT TS KK KGNLAPT+F+HTLNATACAVPRMI+CLL
Sbjct: 424 SASNCTDYQSRRLGIRYRPSE--PTSTSPKKGKGNLAPTKFIHTLNATACAVPRMIICLL 483

Query: 524 ENYQQEDGSVIIPEPLRPFMGGLEIIA 546
           ENYQQEDGSVIIPEPLRPFMGGLE+IA
Sbjct: 484 ENYQQEDGSVIIPEPLRPFMGGLELIA 508

BLAST of Cp4.1LG02g05040 vs. TrEMBL
Match: B9GUZ6_POPTR (Seryl-tRNA synthetase family protein OS=Populus trichocarpa GN=POPTR_0002s10040g PE=4 SV=2)

HSP 1 Score: 800.4 bits (2066), Expect = 1.3e-228
Identity = 408/528 (77.27%), Postives = 453/528 (85.80%), Query Frame = 1

Query: 28  MGFHSSFSVTSLKTLKVAAFPTTSRLIFRLPTKTASLNSLHPCFRNRKPPCP------LL 87
           MG    F  T+++TLK+AA P +SR I +  +KT  LN   P  R+    CP      LL
Sbjct: 1   MGLQCYFGGTTIQTLKLAAIPASSRFILKPISKTLVLN---PFSRHNYVICPQRNPFKLL 60

Query: 88  VRALSFSEVQVDPPTATAGEEIVAKPQWKASIDFKWIRDNKDLVAANIENRKSGANLELV 147
           VRALS + VQ  P T +   ++V KPQWKA+IDFKWIRDNKD VA NI+NR S ANLELV
Sbjct: 61  VRALSATAVQTAPITESLDNKVV-KPQWKAAIDFKWIRDNKDAVALNIKNRNSNANLELV 120

Query: 148 LQLYDKMLNLQKEVERLRAERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLK 207
           L+LY+KML +QKEVERLRAERN VANKMKGK+E SERQKLIEEGKNLKEGL +LEE+L+K
Sbjct: 121 LELYEKMLAVQKEVERLRAERNAVANKMKGKVEISERQKLIEEGKNLKEGLATLEEDLVK 180

Query: 208 LTDQLQQEAQCIPNITHPDVPIGGEDCSIIRKTVGSPREFGFSVKDHLELGKQLNLFDFD 267
           LTD+LQ EAQCIPN+THP VPIGGED S +RK  G+PR+FGF V+DHL+LGK+L+LFDFD
Sbjct: 181 LTDELQLEAQCIPNLTHPLVPIGGEDSSTVRKMAGTPRDFGFPVRDHLQLGKELDLFDFD 240

Query: 268 AAAEVSGSKFYYLKNAAVTLEMGLISWTLSEVMKRGFTPVITPEIVRSSVVEKCGFQPRG 327
           AAAEVSGSKFYYLKN AV LEM L++WTLSEVMK+GFTP+ TPE+VRSSVVEKCGFQPRG
Sbjct: 241 AAAEVSGSKFYYLKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQPRG 300

Query: 328 ENTQVYSIEGSDQCLIGTAEIPVGGIHMDSILAESSLPLKYVAYSHCFRTEAGAAGAATR 387
           +NTQVYSIEGSDQCLIGTAEIPVGGIHMD+ILAE+ LPLKYVAYSHCFRTEAGAAG ATR
Sbjct: 301 DNTQVYSIEGSDQCLIGTAEIPVGGIHMDTILAETQLPLKYVAYSHCFRTEAGAAGTATR 360

Query: 388 GLYRVHQFSKVEMFILCRPEDSESYLEELISIEEDLFTSLGLHFKTLDMASGDLGAPAYR 447
           GLYRVHQFSKVEMF+LCRPE+SESY EELI IEEDLF++LGLH+KTLDMASGDLGAPAYR
Sbjct: 361 GLYRVHQFSKVEMFVLCRPEESESYHEELIKIEEDLFSALGLHYKTLDMASGDLGAPAYR 420

Query: 448 KFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQELIPTTSKKKNKGNLAPTQFVH 507
           KFDVEAWMPGLGRYGEISSASNC DYQSRRLGIRYRP E  P    KK KG+LAPTQFVH
Sbjct: 421 KFDVEAWMPGLGRYGEISSASNCIDYQSRRLGIRYRPSEPTP-APPKKGKGSLAPTQFVH 480

Query: 508 TLNATACAVPRMIVCLLENYQQEDGSVIIPEPLRPFMGGLEIIAPTST 550
           TLNATACAVPRMIVCLLENYQQEDGSVIIP PLR FMGGLE+I P ST
Sbjct: 481 TLNATACAVPRMIVCLLENYQQEDGSVIIPGPLRAFMGGLELITPKST 523

BLAST of Cp4.1LG02g05040 vs. TrEMBL
Match: A9PFH5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 1.3e-228
Identity = 408/528 (77.27%), Postives = 453/528 (85.80%), Query Frame = 1

Query: 28  MGFHSSFSVTSLKTLKVAAFPTTSRLIFRLPTKTASLNSLHPCFRNRKPPCP------LL 87
           MG    F  T+++TLK+AA P +SR I +  +KT  LN   P  R+    CP      LL
Sbjct: 1   MGLQCYFGGTTIQTLKLAAIPASSRFILKPISKTLVLN---PFSRHNYVICPQRNPFKLL 60

Query: 88  VRALSFSEVQVDPPTATAGEEIVAKPQWKASIDFKWIRDNKDLVAANIENRKSGANLELV 147
           VRALS + VQ  P T +   ++V KPQWKA+IDFKWIRDNKD VA NI+NR S ANLELV
Sbjct: 61  VRALSSTAVQTAPITESLDNKVV-KPQWKAAIDFKWIRDNKDAVALNIKNRNSNANLELV 120

Query: 148 LQLYDKMLNLQKEVERLRAERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLK 207
           L+LY+KML +QKEVERLRAERN VANKMKGKLE SERQKLIEEGKNLKEGL +LEE+L+K
Sbjct: 121 LELYEKMLAVQKEVERLRAERNAVANKMKGKLEISERQKLIEEGKNLKEGLATLEEDLVK 180

Query: 208 LTDQLQQEAQCIPNITHPDVPIGGEDCSIIRKTVGSPREFGFSVKDHLELGKQLNLFDFD 267
           LTD+LQ EAQCIPN+THP VPIGGED S +RK  G+PR+FGF VKDHL+LGK+L+LFDFD
Sbjct: 181 LTDELQLEAQCIPNLTHPLVPIGGEDSSTVRKMAGTPRDFGFPVKDHLQLGKELDLFDFD 240

Query: 268 AAAEVSGSKFYYLKNAAVTLEMGLISWTLSEVMKRGFTPVITPEIVRSSVVEKCGFQPRG 327
           AAAEVSGSKFYYLKN AV LEM L++WTLSEVMK+GFTP+ TPE+VRSSVVEKCGFQPRG
Sbjct: 241 AAAEVSGSKFYYLKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQPRG 300

Query: 328 ENTQVYSIEGSDQCLIGTAEIPVGGIHMDSILAESSLPLKYVAYSHCFRTEAGAAGAATR 387
           +NTQVYSIEGSDQCLIGTAEIPVGGIHMD+ILAE+ LPLKYVAYSHCFRTEAGAAG ATR
Sbjct: 301 DNTQVYSIEGSDQCLIGTAEIPVGGIHMDTILAETQLPLKYVAYSHCFRTEAGAAGTATR 360

Query: 388 GLYRVHQFSKVEMFILCRPEDSESYLEELISIEEDLFTSLGLHFKTLDMASGDLGAPAYR 447
           GLYRVHQF+KVEMF+LCRPE+S+SY EELI IEEDLF++LGLH+KTLDMASGDLGAPAYR
Sbjct: 361 GLYRVHQFTKVEMFVLCRPEESDSYHEELIKIEEDLFSALGLHYKTLDMASGDLGAPAYR 420

Query: 448 KFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQELIPTTSKKKNKGNLAPTQFVH 507
           KFDVEAWMPGLGRYGEISSASNC DYQSRRLGIRYRP E  P    KK KG+LAPTQFVH
Sbjct: 421 KFDVEAWMPGLGRYGEISSASNCIDYQSRRLGIRYRPSEPTP-APPKKGKGSLAPTQFVH 480

Query: 508 TLNATACAVPRMIVCLLENYQQEDGSVIIPEPLRPFMGGLEIIAPTST 550
           TLNATACAVPRMIVCLLENYQQEDGSVIIP PLR FMGGLE+I P ST
Sbjct: 481 TLNATACAVPRMIVCLLENYQQEDGSVIIPGPLRAFMGGLELITPKST 523

BLAST of Cp4.1LG02g05040 vs. TrEMBL
Match: V4T240_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000915mg PE=4 SV=1)

HSP 1 Score: 781.2 bits (2016), Expect = 8.4e-223
Identity = 395/511 (77.30%), Postives = 445/511 (87.08%), Query Frame = 1

Query: 39  LKTLKVAAFP---TTSRLIFRLPTKTASLNSLHPCFRNRKPPCPLLVRALSFSEVQVDPP 98
           ++T+K+AA P   ++S  +FR  TKT  L S      ++KPP  LL RA S   +Q    
Sbjct: 1   MQTVKLAAIPAAFSSSCFMFRPVTKTLGLISRRN--HSQKPPFRLLARAFSAPALQTIDT 60

Query: 99  TATAGEEIVAKPQWKASIDFKWIRDNKDLVAANIENRKSGANLELVLQLYDKMLNLQKEV 158
           T   G  +V KPQWKA+IDFKWIRDNK+ V+ANI NR S ANLELVL+LY+KMLN+QKEV
Sbjct: 61  TDNKGG-VVVKPQWKAAIDFKWIRDNKEAVSANIRNRNSNANLELVLELYEKMLNVQKEV 120

Query: 159 ERLRAERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPN 218
           +RLR ERN VANKMKGKLEPSERQKLIEEGKNLKEGLV+LEE+L+KLTD+LQQEAQCIPN
Sbjct: 121 DRLREERNAVANKMKGKLEPSERQKLIEEGKNLKEGLVTLEEDLVKLTDELQQEAQCIPN 180

Query: 219 ITHPDVPIGGEDCSIIRKTVGSPREFGFSVKDHLELGKQLNLFDFDAAAEVSGSKFYYLK 278
           +THPDVP+GGEDCSIIRKTVG+P  F F VKDH +LGK L++FDFDAAAEVSGSKFYYLK
Sbjct: 181 MTHPDVPVGGEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLK 240

Query: 279 NAAVTLEMGLISWTLSEVMKRGFTPVITPEIVRSSVVEKCGFQPRGENTQVYSIEGSDQC 338
           N AV LEMGLI+WTLSEV+KRGFTP+ TPEIVRSSVVEKCGFQPRG NTQVYSIEG+DQC
Sbjct: 241 NEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQC 300

Query: 339 LIGTAEIPVGGIHMDSILAESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMF 398
           LIGTAEIPVGGIHMDSIL+ES LPLKY A+SHCFRTEAGAAG ATRGLYRVHQFSK+EMF
Sbjct: 301 LIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFRTEAGAAGTATRGLYRVHQFSKLEMF 360

Query: 399 ILCRPEDSESYLEELISIEEDLFTSLGLHFKTLDMASGDLGAPAYRKFDVEAWMPGLGRY 458
           + C+PE+S+SY EELI IEEDL++SLGLHFKT+DMA+ DLGAPAYRKFDVEAWMPGLGRY
Sbjct: 361 VFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRY 420

Query: 459 GEISSASNCTDYQSRRLGIRYRPQELIPTTSKKKNKGNLAPTQFVHTLNATACAVPRMIV 518
           GEISSASNCTDYQSRRLGIRYRP +L  +T+ KK KG   PT+FVHTLNATACA+PRMI+
Sbjct: 421 GEISSASNCTDYQSRRLGIRYRPSQL-SSTNAKKGKG---PTRFVHTLNATACAIPRMII 480

Query: 519 CLLENYQQEDGSVIIPEPLRPFMGGLEIIAP 547
           CLLENYQQEDGSVIIPEPLRPFMGGLE I+P
Sbjct: 481 CLLENYQQEDGSVIIPEPLRPFMGGLERISP 504

BLAST of Cp4.1LG02g05040 vs. TAIR10
Match: AT1G11870.2 (AT1G11870.2 Seryl-tRNA synthetase)

HSP 1 Score: 751.1 bits (1938), Expect = 4.7e-217
Identity = 378/507 (74.56%), Postives = 430/507 (84.81%), Query Frame = 1

Query: 45  AAFPTT--SRLIFRLPTKTASLN--SLHPCFRNRKPPCPLLVRALSFSE-VQVDPPTATA 104
           AA P T  SRL  +  T T +L   S H   RN+    PLLVRA S S  VQ  P T T+
Sbjct: 10  AAVPVTFSSRLFLKPFTNTLTLGLFSRHLQPRNK----PLLVRAFSASAAVQDIPATQTS 69

Query: 105 GEEIVAKPQWKASIDFKWIRDNKDLVAANIENRKSGANLELVLQLYDKMLNLQKEVERLR 164
              + A+P WKA+IDFKWIRDNK+ V  NI NR S ANLE VLQLY+ M+NLQKEVERLR
Sbjct: 70  DSSVAARPLWKAAIDFKWIRDNKEAVEINIRNRNSNANLEAVLQLYENMVNLQKEVERLR 129

Query: 165 AERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNITHP 224
            ERN VA KMKGKLEPSER++L+EEGKNLKE LV+LEE+L+KL D+LQ  AQ IPN+THP
Sbjct: 130 EERNNVAKKMKGKLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMTHP 189

Query: 225 DVPIGGEDCSIIRKTVGSPREFGFSVKDHLELGKQLNLFDFDAAAEVSGSKFYYLKNAAV 284
           DVP+GGED S IR+ VGSPREF F +KDHL+LGK L+L DFD+AAEVSGSKF+YLKN AV
Sbjct: 190 DVPVGGEDSSAIRQEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAV 249

Query: 285 TLEMGLISWTLSEVMKRGFTPVITPEIVRSSVVEKCGFQPRGENTQVYSIEGSDQCLIGT 344
            LEM L++WTLS+VMK+G+TP+ TPEIVRSS+VEKCGFQPRG+NTQVYSI+G+DQCLIGT
Sbjct: 250 LLEMALLNWTLSQVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSIDGTDQCLIGT 309

Query: 345 AEIPVGGIHMDSILAESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCR 404
           AEIPVGGIHMDSIL ES+LPLKY+A+SHCFRTEAGAAGAAT+GLYRVHQFSK EMF++C+
Sbjct: 310 AEIPVGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMFVICQ 369

Query: 405 PEDSESYLEELISIEEDLFTSLGLHFKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEIS 464
           PEDSES+ +ELI IEEDLFTSLGLHFKTLDMA+ DLGAPAYRKFD+EAWMPGLGR+GEIS
Sbjct: 370 PEDSESFHQELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMPGLGRFGEIS 429

Query: 465 SASNCTDYQSRRLGIRYRPQELIPTTSKKKNKGNLAPTQFVHTLNATACAVPRMIVCLLE 524
           SASNCTDYQSRRLGIRYRP E  P T  KK K NL  T+FVHTLNATACAVPRM+VCLLE
Sbjct: 430 SASNCTDYQSRRLGIRYRPSE-PPQTGPKKGKANLPATKFVHTLNATACAVPRMMVCLLE 489

Query: 525 NYQQEDGSVIIPEPLRPFMGGLEIIAP 547
           NYQQEDGSV+IPEPLRPFMGG+E+I P
Sbjct: 490 NYQQEDGSVVIPEPLRPFMGGIELIKP 511

BLAST of Cp4.1LG02g05040 vs. TAIR10
Match: AT5G27470.1 (AT5G27470.1 seryl-tRNA synthetase / serine--tRNA ligase)

HSP 1 Score: 244.6 bits (623), Expect = 1.4e-64
Identity = 145/420 (34.52%), Postives = 239/420 (56.90%), Query Frame = 1

Query: 132 RKSGANLELV---LQLYDKMLNLQKEVERLRAERNMVANKMKG-KLEPSERQKLIEEGKN 191
           R+  A++E+V   ++L  +    Q EV+  R E N +  ++   K++  +  ++I++ + 
Sbjct: 23  RRRFASVEIVDEIIKLDKEWRQRQFEVDSFRKEFNKLNKQVAQLKIKKEDASEIIQQTEK 82

Query: 192 LKEGLVSLEENLLKLTDQLQQEAQCIPNITHPDVPIGGEDCSIIRKTVGSPREF---GFS 251
            K+   + E  + +    L+ + + + N+ H  VP+  ++ + +   +   + F   G  
Sbjct: 83  NKQDSTAKEAEVREAYAALKAKLEQVGNLVHDSVPVDKDEANNLVIKLWGEKRFSTPGLK 142

Query: 252 VKDHLELGKQLNLFDFDAAAEVSGSKFYYLKNAAVTLEMGLISWTLSEVMKRGFTPVITP 311
           +K+H++L + L + D    AE++G++ ++LK   + L   LI++ L+ + KRGFT +  P
Sbjct: 143 LKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLMLNQALINFGLTFLKKRGFTGLQPP 202

Query: 312 EIVRSSVVEKCGFQPRGENTQVYSI--EGSDQCLIGTAEIPVGGIHMDSILAESSLPLKY 371
             +R  V+ KC  Q    + ++Y +  EG D+ LI TAE P+   H+D  +  + LPL+Y
Sbjct: 203 FFMRKDVMAKCA-QLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHIDEWIHPTELPLRY 262

Query: 372 VAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCRPEDSESY--LEELISIEEDLFTS 431
             YS CFR EAG+ G  T G++RVHQF K+E F +  P ++ S+  L+E++   ED + +
Sbjct: 263 AGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITGPNENASWEMLDEMMKNSEDFYQA 322

Query: 432 LGLHFKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQE 491
           L L ++ + + SG L   A +K+D+EAW P    + E+ S SNCTDYQ+RRL IRY    
Sbjct: 323 LKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSETFRELVSCSNCTDYQARRLEIRY---- 382

Query: 492 LIPTTSKKKNKGNLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGSVIIPEPLRPFMGG 541
                   + K N    Q+VH LN+T  A  R I C+LENYQ+EDG V IPE L+PFMGG
Sbjct: 383 -------GQKKSNEQTKQYVHMLNSTLTATERTICCILENYQREDG-VDIPEVLQPFMGG 429

BLAST of Cp4.1LG02g05040 vs. NCBI nr
Match: gi|778687426|ref|XP_004136430.2| (PREDICTED: serine--tRNA ligase, mitochondrial [Cucumis sativus])

HSP 1 Score: 920.6 bits (2378), Expect = 1.3e-264
Identity = 468/549 (85.25%), Postives = 497/549 (90.53%), Query Frame = 1

Query: 3   IIEARAAIRYFHTFPPSKSFLRAPTMGFHSSFSVTSLKTLKVAAFP--TTSRLIFRLPTK 62
           I+  R AIR+FH+FPPS +F +A TMGF         +TLK+ AFP  +TSRL+   PTK
Sbjct: 5   IMGERGAIRHFHSFPPSHTFPKASTMGF---------QTLKLPAFPASSTSRLMVLPPTK 64

Query: 63  TASLNSLHPCFRNRKPPCPLLVRALSFSEVQVD-PPTATAGEEIVAKPQWKASIDFKWIR 122
           T SL SLHPC R  +PP  LLVRA S   V+ D PP+  AGEE V KPQWKASIDFKWIR
Sbjct: 65  TPSLTSLHPCVRTHRPPSRLLVRAFSLPSVEFDHPPSTIAGEEKVVKPQWKASIDFKWIR 124

Query: 123 DNKDLVAANIENRKSGANLELVLQLYDKMLNLQKEVERLRAERNMVANKMKGKLEPSERQ 182
           DNKDLVA+NI+NRKSGANLELVLQLYDKMLNLQKEVE+LRAERNMVANKMKGKLEPSERQ
Sbjct: 125 DNKDLVASNIQNRKSGANLELVLQLYDKMLNLQKEVEQLRAERNMVANKMKGKLEPSERQ 184

Query: 183 KLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNITHPDVPIGGEDCSIIRKTVGSPR 242
           KLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPN THPDVPIGGEDCSIIRK VGSPR
Sbjct: 185 KLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNTTHPDVPIGGEDCSIIRKMVGSPR 244

Query: 243 EFGFSVKDHLELGKQLNLFDFDAAAEVSGSKFYYLKNAAVTLEMGLISWTLSEVMKRGFT 302
           EF F VKDHLELGKQL++FDFDAAAEVSGSKFYYLKNAAVTLE+GLI+WTLSEVMKRGFT
Sbjct: 245 EFSFPVKDHLELGKQLDIFDFDAAAEVSGSKFYYLKNAAVTLELGLINWTLSEVMKRGFT 304

Query: 303 PVITPEIVRSSVVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIHMDSILAESSLP 362
           P+ITPEIVRS+VVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIHMDSIL+ESSLP
Sbjct: 305 PLITPEIVRSTVVEKCGFQPRGENTQVYSIEGSDQCLIGTAEIPVGGIHMDSILSESSLP 364

Query: 363 LKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCRPEDSESYLEELISIEEDLFT 422
           LKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFI CRPE+SESY EELI IEEDLF+
Sbjct: 365 LKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFIFCRPEESESYHEELIRIEEDLFS 424

Query: 423 SLGLHFKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQ 482
           SLGLHFKTLDMAS DLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQ
Sbjct: 425 SLGLHFKTLDMASADLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQ 484

Query: 483 ELIPTTSKKKNKGNLAPTQFVHTLNATACAVPRMIVCLLENYQQEDGSVIIPEPLRPFMG 542
           E +P+T  KK KGNLAPTQFVHTLNATACAVPRM+VCLLENYQQEDGSVIIPEPLRPFMG
Sbjct: 485 EQVPST-LKKGKGNLAPTQFVHTLNATACAVPRMMVCLLENYQQEDGSVIIPEPLRPFMG 543

Query: 543 GLEIIAPTS 549
           GL+ I+P S
Sbjct: 545 GLDRISPAS 543

BLAST of Cp4.1LG02g05040 vs. NCBI nr
Match: gi|659132466|ref|XP_008466212.1| (PREDICTED: serine--tRNA ligase, mitochondrial [Cucumis melo])

HSP 1 Score: 898.3 bits (2320), Expect = 6.8e-258
Identity = 456/528 (86.36%), Postives = 481/528 (91.10%), Query Frame = 1

Query: 24  RAPTMGFHSSFSVTSLKTLKVAAFP--TTSRLIFRLPTKTASLNSLHPCFRNRKPPCPLL 83
           +A TMGF         +TLK+A FP  +TSRL+F  PTKT SL   HPC R  +PP  L 
Sbjct: 43  KASTMGF---------QTLKLADFPASSTSRLMFLPPTKTPSLTPFHPCVRTHRPPSRLF 102

Query: 84  VRALSFSEVQVD-PPTATAGEEIVAKPQWKASIDFKWIRDNKDLVAANIENRKSGANLEL 143
           VRA S   VQVD PPT  AGEE V KPQWKASIDFKWIRDNKDLVA+NI NRKSGANLEL
Sbjct: 103 VRAFSLPSVQVDHPPTTIAGEEKVVKPQWKASIDFKWIRDNKDLVASNIHNRKSGANLEL 162

Query: 144 VLQLYDKMLNLQKEVERLRAERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLL 203
           VLQLYD+MLNLQKEVE+LRAERN+VANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLL
Sbjct: 163 VLQLYDEMLNLQKEVEQLRAERNVVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLL 222

Query: 204 KLTDQLQQEAQCIPNITHPDVPIGGEDCSIIRKTVGSPREFGFSVKDHLELGKQLNLFDF 263
           KLTDQLQQEAQCIPN THPDVPIGGEDCSIIRK VGSPREF F VKDHLELG+QL++FDF
Sbjct: 223 KLTDQLQQEAQCIPNTTHPDVPIGGEDCSIIRKMVGSPREFSFPVKDHLELGRQLDIFDF 282

Query: 264 DAAAEVSGSKFYYLKNAAVTLEMGLISWTLSEVMKRGFTPVITPEIVRSSVVEKCGFQPR 323
           DAAAEVSGSKFYYLKNAAVTLE+GLI+WTLSEVMKRGFTP+ITPEIVRS+VVEKCGFQPR
Sbjct: 283 DAAAEVSGSKFYYLKNAAVTLELGLINWTLSEVMKRGFTPLITPEIVRSTVVEKCGFQPR 342

Query: 324 GENTQVYSIEGSDQCLIGTAEIPVGGIHMDSILAESSLPLKYVAYSHCFRTEAGAAGAAT 383
           GENTQVYSIEGSDQCLIGTAEIPVGGIHMDSIL+ESSLPLKYVAYSHCFRTEAGAAGAAT
Sbjct: 343 GENTQVYSIEGSDQCLIGTAEIPVGGIHMDSILSESSLPLKYVAYSHCFRTEAGAAGAAT 402

Query: 384 RGLYRVHQFSKVEMFILCRPEDSESYLEELISIEEDLFTSLGLHFKTLDMASGDLGAPAY 443
           RGLYRVHQFSKVEMFI CRPE+SESY EELI IEEDLF+SLGLHFKTLDMAS DLGAPAY
Sbjct: 403 RGLYRVHQFSKVEMFIFCRPEESESYHEELIRIEEDLFSSLGLHFKTLDMASADLGAPAY 462

Query: 444 RKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQELIPTTSKKKNKGNLAPTQFV 503
           RKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQE +P+T  KK KGNLAPTQFV
Sbjct: 463 RKFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQEPVPST-LKKGKGNLAPTQFV 522

Query: 504 HTLNATACAVPRMIVCLLENYQQEDGSVIIPEPLRPFMGGLEIIAPTS 549
           HTLNATACAVPRMIVCLLENYQQEDGSVIIPEPLRPFMGGL++I+PTS
Sbjct: 523 HTLNATACAVPRMIVCLLENYQQEDGSVIIPEPLRPFMGGLDLISPTS 560

BLAST of Cp4.1LG02g05040 vs. NCBI nr
Match: gi|802569948|ref|XP_012067914.1| (PREDICTED: serine--tRNA ligase, mitochondrial [Jatropha curcas])

HSP 1 Score: 823.2 bits (2125), Expect = 2.8e-235
Identity = 418/520 (80.38%), Postives = 461/520 (88.65%), Query Frame = 1

Query: 34  FSVTSLKTLKVAAFP---TTSRLIFRLP-TKTASLNSLHPCFRN---RKPPCPLLVRALS 93
           F  T+L+TL++A  P   ++SR IF  P +KT +LNS+   ++N   ++PP  LL RALS
Sbjct: 4   FGGTTLQTLRMAVIPASSSSSRFIFTKPMSKTLTLNSISLRYKNNFLKRPPFTLLTRALS 63

Query: 94  FSEVQVDPPTATAGEEIVAKPQWKASIDFKWIRDNKDLVAANIENRKSGANLELVLQLYD 153
            + VQ   PT +   + V KPQWKA+IDFKWIRDNKD VA NI+NR S ANLELVL+LY+
Sbjct: 64  ATAVQEALPTESIDNKSVVKPQWKAAIDFKWIRDNKDAVALNIKNRNSNANLELVLELYE 123

Query: 154 KMLNLQKEVERLRAERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQL 213
           KML +QKEVERLR ERN VANKMKGKLEPSERQKLIEEGKNLKEGLVSLEE+LLKLTD+L
Sbjct: 124 KMLAVQKEVERLRGERNFVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEEDLLKLTDEL 183

Query: 214 QQEAQCIPNITHPDVPIGGEDCSIIRKTVGSPREFGFSVKDHLELGKQLNLFDFDAAAEV 273
           QQEAQCIPN+THPDVPIG EDCS +RKTVGSPREF F VKDHL+LGK+L+LFDFDAAAEV
Sbjct: 184 QQEAQCIPNMTHPDVPIGVEDCSTVRKTVGSPREFSFPVKDHLQLGKELDLFDFDAAAEV 243

Query: 274 SGSKFYYLKNAAVTLEMGLISWTLSEVMKRGFTPVITPEIVRSSVVEKCGFQPRGENTQV 333
           SGSKFYYLKN AV LEM LI+WTLSEVMKRGF P+ TPE+VRSSVVEKCGFQPRG+NTQV
Sbjct: 244 SGSKFYYLKNEAVMLEMALINWTLSEVMKRGFMPLTTPELVRSSVVEKCGFQPRGDNTQV 303

Query: 334 YSIEGSDQCLIGTAEIPVGGIHMDSILAESSLPLKYVAYSHCFRTEAGAAGAATRGLYRV 393
           YS+EGSDQCLIGTAEIPVGGIHMDSIL ES LPLKYVA+SHCFRTEAGAAG ATRGLYRV
Sbjct: 304 YSVEGSDQCLIGTAEIPVGGIHMDSILTESMLPLKYVAFSHCFRTEAGAAGTATRGLYRV 363

Query: 394 HQFSKVEMFILCRPEDSESYLEELISIEEDLFTSLGLHFKTLDMASGDLGAPAYRKFDVE 453
           HQFSKVEMFILC+PE+SESY +ELI IEEDLF+SLGLH+KTLDMASGDLGAPAYRKFDVE
Sbjct: 364 HQFSKVEMFILCQPEESESYHQELIKIEEDLFSSLGLHYKTLDMASGDLGAPAYRKFDVE 423

Query: 454 AWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQELIPT-TSKKKNKGNLAPTQFVHTLNA 513
           AWMPGLGRYGEISSASNCTDYQSRRLGIRYRP E  PT TS KK KGNLAPT+F+HTLNA
Sbjct: 424 AWMPGLGRYGEISSASNCTDYQSRRLGIRYRPSE--PTSTSPKKGKGNLAPTKFIHTLNA 483

Query: 514 TACAVPRMIVCLLENYQQEDGSVIIPEPLRPFMGGLEIIA 546
           TACAVPRMI+CLLENYQQEDGSVIIPEPLRPFMGGLE+IA
Sbjct: 484 TACAVPRMIICLLENYQQEDGSVIIPEPLRPFMGGLELIA 521

BLAST of Cp4.1LG02g05040 vs. NCBI nr
Match: gi|643734747|gb|KDP41417.1| (hypothetical protein JCGZ_15824 [Jatropha curcas])

HSP 1 Score: 816.6 bits (2108), Expect = 2.6e-233
Identity = 412/507 (81.26%), Postives = 452/507 (89.15%), Query Frame = 1

Query: 44  VAAFPTTSRLIFRLP-TKTASLNSLHPCFRN---RKPPCPLLVRALSFSEVQVDPPTATA 103
           + A  ++SR IF  P +KT +LNS+   ++N   ++PP  LL RALS + VQ   PT + 
Sbjct: 4   IPASSSSSRFIFTKPMSKTLTLNSISLRYKNNFLKRPPFTLLTRALSATAVQEALPTESI 63

Query: 104 GEEIVAKPQWKASIDFKWIRDNKDLVAANIENRKSGANLELVLQLYDKMLNLQKEVERLR 163
             + V KPQWKA+IDFKWIRDNKD VA NI+NR S ANLELVL+LY+KML +QKEVERLR
Sbjct: 64  DNKSVVKPQWKAAIDFKWIRDNKDAVALNIKNRNSNANLELVLELYEKMLAVQKEVERLR 123

Query: 164 AERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLKLTDQLQQEAQCIPNITHP 223
            ERN VANKMKGKLEPSERQKLIEEGKNLKEGLVSLEE+LLKLTD+LQQEAQCIPN+THP
Sbjct: 124 GERNFVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEEDLLKLTDELQQEAQCIPNMTHP 183

Query: 224 DVPIGGEDCSIIRKTVGSPREFGFSVKDHLELGKQLNLFDFDAAAEVSGSKFYYLKNAAV 283
           DVPIG EDCS +RKTVGSPREF F VKDHL+LGK+L+LFDFDAAAEVSGSKFYYLKN AV
Sbjct: 184 DVPIGVEDCSTVRKTVGSPREFSFPVKDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAV 243

Query: 284 TLEMGLISWTLSEVMKRGFTPVITPEIVRSSVVEKCGFQPRGENTQVYSIEGSDQCLIGT 343
            LEM LI+WTLSEVMKRGF P+ TPE+VRSSVVEKCGFQPRG+NTQVYS+EGSDQCLIGT
Sbjct: 244 MLEMALINWTLSEVMKRGFMPLTTPELVRSSVVEKCGFQPRGDNTQVYSVEGSDQCLIGT 303

Query: 344 AEIPVGGIHMDSILAESSLPLKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCR 403
           AEIPVGGIHMDSIL ES LPLKYVA+SHCFRTEAGAAG ATRGLYRVHQFSKVEMFILC+
Sbjct: 304 AEIPVGGIHMDSILTESMLPLKYVAFSHCFRTEAGAAGTATRGLYRVHQFSKVEMFILCQ 363

Query: 404 PEDSESYLEELISIEEDLFTSLGLHFKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEIS 463
           PE+SESY +ELI IEEDLF+SLGLH+KTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEIS
Sbjct: 364 PEESESYHQELIKIEEDLFSSLGLHYKTLDMASGDLGAPAYRKFDVEAWMPGLGRYGEIS 423

Query: 464 SASNCTDYQSRRLGIRYRPQELIPT-TSKKKNKGNLAPTQFVHTLNATACAVPRMIVCLL 523
           SASNCTDYQSRRLGIRYRP E  PT TS KK KGNLAPT+F+HTLNATACAVPRMI+CLL
Sbjct: 424 SASNCTDYQSRRLGIRYRPSE--PTSTSPKKGKGNLAPTKFIHTLNATACAVPRMIICLL 483

Query: 524 ENYQQEDGSVIIPEPLRPFMGGLEIIA 546
           ENYQQEDGSVIIPEPLRPFMGGLE+IA
Sbjct: 484 ENYQQEDGSVIIPEPLRPFMGGLELIA 508

BLAST of Cp4.1LG02g05040 vs. NCBI nr
Match: gi|566157213|ref|XP_002301073.2| (seryl-tRNA synthetase family protein [Populus trichocarpa])

HSP 1 Score: 800.4 bits (2066), Expect = 1.9e-228
Identity = 408/528 (77.27%), Postives = 453/528 (85.80%), Query Frame = 1

Query: 28  MGFHSSFSVTSLKTLKVAAFPTTSRLIFRLPTKTASLNSLHPCFRNRKPPCP------LL 87
           MG    F  T+++TLK+AA P +SR I +  +KT  LN   P  R+    CP      LL
Sbjct: 1   MGLQCYFGGTTIQTLKLAAIPASSRFILKPISKTLVLN---PFSRHNYVICPQRNPFKLL 60

Query: 88  VRALSFSEVQVDPPTATAGEEIVAKPQWKASIDFKWIRDNKDLVAANIENRKSGANLELV 147
           VRALS + VQ  P T +   ++V KPQWKA+IDFKWIRDNKD VA NI+NR S ANLELV
Sbjct: 61  VRALSATAVQTAPITESLDNKVV-KPQWKAAIDFKWIRDNKDAVALNIKNRNSNANLELV 120

Query: 148 LQLYDKMLNLQKEVERLRAERNMVANKMKGKLEPSERQKLIEEGKNLKEGLVSLEENLLK 207
           L+LY+KML +QKEVERLRAERN VANKMKGK+E SERQKLIEEGKNLKEGL +LEE+L+K
Sbjct: 121 LELYEKMLAVQKEVERLRAERNAVANKMKGKVEISERQKLIEEGKNLKEGLATLEEDLVK 180

Query: 208 LTDQLQQEAQCIPNITHPDVPIGGEDCSIIRKTVGSPREFGFSVKDHLELGKQLNLFDFD 267
           LTD+LQ EAQCIPN+THP VPIGGED S +RK  G+PR+FGF V+DHL+LGK+L+LFDFD
Sbjct: 181 LTDELQLEAQCIPNLTHPLVPIGGEDSSTVRKMAGTPRDFGFPVRDHLQLGKELDLFDFD 240

Query: 268 AAAEVSGSKFYYLKNAAVTLEMGLISWTLSEVMKRGFTPVITPEIVRSSVVEKCGFQPRG 327
           AAAEVSGSKFYYLKN AV LEM L++WTLSEVMK+GFTP+ TPE+VRSSVVEKCGFQPRG
Sbjct: 241 AAAEVSGSKFYYLKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQPRG 300

Query: 328 ENTQVYSIEGSDQCLIGTAEIPVGGIHMDSILAESSLPLKYVAYSHCFRTEAGAAGAATR 387
           +NTQVYSIEGSDQCLIGTAEIPVGGIHMD+ILAE+ LPLKYVAYSHCFRTEAGAAG ATR
Sbjct: 301 DNTQVYSIEGSDQCLIGTAEIPVGGIHMDTILAETQLPLKYVAYSHCFRTEAGAAGTATR 360

Query: 388 GLYRVHQFSKVEMFILCRPEDSESYLEELISIEEDLFTSLGLHFKTLDMASGDLGAPAYR 447
           GLYRVHQFSKVEMF+LCRPE+SESY EELI IEEDLF++LGLH+KTLDMASGDLGAPAYR
Sbjct: 361 GLYRVHQFSKVEMFVLCRPEESESYHEELIKIEEDLFSALGLHYKTLDMASGDLGAPAYR 420

Query: 448 KFDVEAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQELIPTTSKKKNKGNLAPTQFVH 507
           KFDVEAWMPGLGRYGEISSASNC DYQSRRLGIRYRP E  P    KK KG+LAPTQFVH
Sbjct: 421 KFDVEAWMPGLGRYGEISSASNCIDYQSRRLGIRYRPSEPTP-APPKKGKGSLAPTQFVH 480

Query: 508 TLNATACAVPRMIVCLLENYQQEDGSVIIPEPLRPFMGGLEIIAPTST 550
           TLNATACAVPRMIVCLLENYQQEDGSVIIP PLR FMGGLE+I P ST
Sbjct: 481 TLNATACAVPRMIVCLLENYQQEDGSVIIPGPLRAFMGGLELITPKST 523

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
SYSM_ARATH8.4e-21674.56Serine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA7... [more]
SYS_TREDE9.9e-11648.60Serine--tRNA ligase OS=Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM... [more]
SYS_RUBXD6.8e-10946.90Serine--tRNA ligase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) G... [more]
SYS_BORDL2.4e-10647.26Serine--tRNA ligase OS=Borrelia duttonii (strain Ly) GN=serS PE=3 SV=1[more]
SYS_DICT69.2e-10645.98Serine--tRNA ligase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 /... [more]
Match NameE-valueIdentityDescription
A0A0A0LHK3_CUCSA8.9e-26585.25Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889830 PE=4 SV=1[more]
A0A067KZ22_JATCU1.8e-23381.26Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15824 PE=4 SV=1[more]
B9GUZ6_POPTR1.3e-22877.27Seryl-tRNA synthetase family protein OS=Populus trichocarpa GN=POPTR_0002s10040g... [more]
A9PFH5_POPTR1.3e-22877.27Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1[more]
V4T240_9ROSI8.4e-22377.30Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000915mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G11870.24.7e-21774.56 Seryl-tRNA synthetase[more]
AT5G27470.11.4e-6434.52 seryl-tRNA synthetase / serine--tRNA ligase[more]
Match NameE-valueIdentityDescription
gi|778687426|ref|XP_004136430.2|1.3e-26485.25PREDICTED: serine--tRNA ligase, mitochondrial [Cucumis sativus][more]
gi|659132466|ref|XP_008466212.1|6.8e-25886.36PREDICTED: serine--tRNA ligase, mitochondrial [Cucumis melo][more]
gi|802569948|ref|XP_012067914.1|2.8e-23580.38PREDICTED: serine--tRNA ligase, mitochondrial [Jatropha curcas][more]
gi|643734747|gb|KDP41417.1|2.6e-23381.26hypothetical protein JCGZ_15824 [Jatropha curcas][more]
gi|566157213|ref|XP_002301073.2|1.9e-22877.27seryl-tRNA synthetase family protein [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006434seryl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004828serine-tRNA ligase activity
GO:0005524ATP binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR015866Ser-tRNA-synth_1_N
IPR010978tRNA-bd_arm
IPR006195aa-tRNA-synth_II
IPR002317Ser-tRNA-ligase_type_1
IPR002314aa-tRNA-synt_IIb
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030154 cell differentiation
biological_process GO:0006364 rRNA processing
biological_process GO:0006418 tRNA aminoacylation for protein translation
biological_process GO:0048608 reproductive structure development
biological_process GO:0009791 post-embryonic development
biological_process GO:0009657 plastid organization
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0042793 transcription from plastid promoter
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006566 threonine metabolic process
biological_process GO:0008652 cellular amino acid biosynthetic process
biological_process GO:0006434 seryl-tRNA aminoacylation
biological_process GO:0000096 sulfur amino acid metabolic process
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0042545 cell wall modification
biological_process GO:0048481 plant ovule development
biological_process GO:0010207 photosystem II assembly
biological_process GO:0007005 mitochondrion organization
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0006544 glycine metabolic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009902 chloroplast relocation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004828 serine-tRNA ligase activity
molecular_function GO:0000166 nucleotide binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g05040.1Cp4.1LG02g05040.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)PFAMPF00587tRNA-synt_2bcoord: 331..521
score: 1.3
IPR002317Serine-tRNA ligase, type1PRINTSPR00981TRNASYNTHSERcoord: 372..384
score: 7.5E-24coord: 424..437
score: 7.5E-24coord: 441..457
score: 7.5E-24coord: 384..397
score: 7.5E-24coord: 459..475
score: 7.5
IPR002317Serine-tRNA ligase, type1PANTHERPTHR11778SERYL-TRNA SYNTHETASEcoord: 102..546
score: 3.2E
IPR002317Serine-tRNA ligase, type1TIGRFAMsTIGR00414TIGR00414coord: 113..538
score: 2.3E
IPR006195Aminoacyl-tRNA synthetase, class IIPROFILEPS50862AA_TRNA_LIGASE_IIcoord: 247..531
score: 23
IPR010978tRNA-binding armunknownSSF46589tRNA-binding armcoord: 113..222
score: 1.67
IPR015866Serine-tRNA synthetase, type1, N-terminalGENE3DG3DSA:1.10.287.40coord: 113..214
score: 1.1
IPR015866Serine-tRNA synthetase, type1, N-terminalPFAMPF02403Seryl_tRNA_Ncoord: 113..216
score: 6.5
NoneNo IPR availableunknownCoilCoilcoord: 141..168
score: -coord: 178..212
scor
NoneNo IPR availableGENE3DG3DSA:3.30.930.10coord: 215..542
score: 7.1E
NoneNo IPR availablePANTHERPTHR11778:SF0SERINE--TRNA LIGASE, MITOCHONDRIALcoord: 102..546
score: 3.2E
NoneNo IPR availableunknownSSF55681Class II aaRS and biotin synthetasescoord: 226..540
score: 1.93

The following gene(s) are paralogous to this gene:

None