Cp4.1LG02g04510 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g04510
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionFLOWERING PROMOTING FACTOR 1 family protein
LocationCp4.1LG02 : 2311628 .. 2311996 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGGCGTTTGGGTTTTCCGATCAAACGGCGTGATACGCCTCGTCGAAAACTCCCAAGCCGGCGCCGGCACCGGCACCGGCACCGGCGCGGACTACTCCTCCTCCGGCAGCGGCGGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCGTCGGGGCAGCCGGTTTGTTCTTACGGATTCCTTGAGAAGATTCTGGAAGGTTTAGGATGGGAGAGATATTACGAAGGCGATCCAGATTTGTTCCAGTTTCATAAGCTTTCTTCCATTGATCTAATTTCTCTTCCAATGGAGTTCTCCAAATTCAACTCCGTTTACATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTTCGAGAACCCTAA

mRNA sequence

ATGTCAGGCGTTTGGGTTTTCCGATCAAACGGCGTGATACGCCTCGTCGAAAACTCCCAAGCCGGCGCCGGCACCGGCACCGGCACCGGCGCGGACTACTCCTCCTCCGGCAGCGGCGGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCGTCGGGGCAGCCGGTTTGTTCTTACGGATTCCTTGAGAAGATTCTGGAAGGTTTAGGATGGGAGAGATATTACGAAGGCGATCCAGATTTGTTCCAGTTTCATAAGCTTTCTTCCATTGATCTAATTTCTCTTCCAATGGAGTTCTCCAAATTCAACTCCGTTTACATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTTCGAGAACCCTAA

Coding sequence (CDS)

ATGTCAGGCGTTTGGGTTTTCCGATCAAACGGCGTGATACGCCTCGTCGAAAACTCCCAAGCCGGCGCCGGCACCGGCACCGGCACCGGCGCGGACTACTCCTCCTCCGGCAGCGGCGGCGGAAGAAAGAAGGTTCTGGTTCATCTTCCGTCGGGGCAGCCGGTTTGTTCTTACGGATTCCTTGAGAAGATTCTGGAAGGTTTAGGATGGGAGAGATATTACGAAGGCGATCCAGATTTGTTCCAGTTTCATAAGCTTTCTTCCATTGATCTAATTTCTCTTCCAATGGAGTTCTCCAAATTCAACTCCGTTTACATGTACGATCTCGTCGTCAAAAACCCTAACGTCTTCCACGTTCGAGAACCCTAA

Protein sequence

MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGFLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVREP
Homology
[Close]
BLAST of Cp4.1LG02g04510 vs. Swiss-Prot
Match: FLP1_ARATH (Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana GN=FLP1 PE=2 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-35
Identity = 80/128 (62.50%), Postives = 91/128 (71.09%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGG-----RKKVLVHLPSGQPV 60
           MSGVWVF  NGV+RLVEN           G    SS SGG      R+K+LVHLPS + V
Sbjct: 1   MSGVWVFNKNGVMRLVENPY-----NQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVV 60

Query: 61  CSYGFLEKILEGLGWERYYEGD--PDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKN 120
            SYG LEKIL+ LGWERYY GD    L QFHK +SIDLISLP +FSKFNS++MYD+VVKN
Sbjct: 61  SSYGSLEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKN 120

Query: 121 PNVFHVRE 122
           PNVFHVR+
Sbjct: 121 PNVFHVRD 123

[Close]
BLAST of Cp4.1LG02g04510 vs. Swiss-Prot
Match: FLP2_ARATH (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana GN=FLP2 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 7.2e-35
Identity = 76/121 (62.81%), Postives = 87/121 (71.90%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVF +NGVIRLVEN     G  T             GR+ VLV+LP+G+ V SY  
Sbjct: 1   MSGVWVF-NNGVIRLVENPNQSGGVST----------QSHGRRNVLVYLPTGEAVSSYSS 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LE+IL  LGWERY+ GD DL Q+HK SSIDLISLP +FSKFNSVYMYD+VVKNPN FHVR
Sbjct: 61  LEQILRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVR 110

Query: 121 E 122
           +
Sbjct: 121 D 110

[Close]
BLAST of Cp4.1LG02g04510 vs. Swiss-Prot
Match: FPF1_ARATH (Flowering-promoting factor 1 OS=Arabidopsis thaliana GN=FPF1 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.2e-33
Identity = 76/123 (61.79%), Postives = 92/123 (74.80%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVEN-SQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYG 60
           MSGVWVF+ NGVIRLVEN +Q+G+ T                R+KV+V+LP+G+ V SY 
Sbjct: 1   MSGVWVFK-NGVIRLVENPNQSGSDTQN--------------RRKVMVYLPTGEVVSSYS 60

Query: 61  FLEKILEGLGWERYYEG-DPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFH 120
            LE+IL+ LGWERY+ G D DL QFHK SSIDLISLP +F+KFNSVYMYD+VVKNPN FH
Sbjct: 61  TLEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFH 108

Query: 121 VRE 122
           VR+
Sbjct: 121 VRD 108

[Close]
BLAST of Cp4.1LG02g04510 vs. Swiss-Prot
Match: FPF1_SINAL (Flowering-promoting factor 1 OS=Sinapis alba GN=FPF1 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.6e-32
Identity = 73/122 (59.84%), Postives = 87/122 (71.31%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVF+ NGVIRLVEN                S G    R+KV+V+LP+G+ + SY  
Sbjct: 1   MSGVWVFK-NGVIRLVENPN-------------QSGGDTNSRRKVMVYLPTGEVISSYST 60

Query: 61  LEKILEGLGWERYYEG-DPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHV 120
           LE+IL  LGWERY+ G D DL QFHK SSIDLISLP +F+KF+SVYMYD+VVKNPN FHV
Sbjct: 61  LEQILRSLGWERYFGGGDTDLLQFHKRSSIDLISLPKDFTKFSSVYMYDIVVKNPNYFHV 108

Query: 121 RE 122
           R+
Sbjct: 121 RD 108

[Close]
BLAST of Cp4.1LG02g04510 vs. Swiss-Prot
Match: FLP1_ORYSJ (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica GN=RAA1 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.8e-30
Identity = 73/119 (61.34%), Postives = 82/119 (68.91%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVF+ NGV+RLVE  QA AGT              GGR+K LVH PSGQ V SY  
Sbjct: 1   MSGVWVFK-NGVVRLVEKQQATAGTAVA-----------GGRRKALVHTPSGQVVSSYAA 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHV 120
           LE  L  LGWERYYE DP LFQFHK  S+DLISLP +FS F+SV+MYD+VVKN + F V
Sbjct: 61  LEARLTALGWERYYE-DPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRDSFRV 106

[Close]
BLAST of Cp4.1LG02g04510 vs. TrEMBL
Match: A0A0A0LHE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881700 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.9e-51
Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAG-TGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYG 60
           MSGVWVFRSNGV+RLVENSQAG   +  G G  +   G GGGRKKVLVHLPSGQPVCSYG
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGDDYSSDGHGHQHHHHGGGGGRKKVLVHLPSGQPVCSYG 60

Query: 61  FLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHV 120
           FL+KILEGLGWERYYEGDPD FQFHK SSIDLISLPM+FSKFNS+YM+DLV+KNPNVFHV
Sbjct: 61  FLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMFDLVIKNPNVFHV 120

Query: 121 REP 123
           REP
Sbjct: 121 REP 123

[Close]
BLAST of Cp4.1LG02g04510 vs. TrEMBL
Match: A0A067FUZ2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033867mg PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-39
Identity = 84/121 (69.42%), Postives = 94/121 (77.69%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVF +NGVIRL+EN QA             S GS   R+KVLVHLP+G+ V SY  
Sbjct: 1   MSGVWVFNTNGVIRLIENPQA------------ESQGSSSSRRKVLVHLPTGEVVSSYSS 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LE+IL GLGWERYY GDPDLFQFHK SSIDLISLP +FSKFNSVYMYD+V+KNPNVFHVR
Sbjct: 61  LEQILTGLGWERYYGGDPDLFQFHKHSSIDLISLPRDFSKFNSVYMYDIVIKNPNVFHVR 109

Query: 121 E 122
           +
Sbjct: 121 D 109

[Close]
BLAST of Cp4.1LG02g04510 vs. TrEMBL
Match: A0A068TXC9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034354001 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.4e-39
Identity = 83/121 (68.60%), Postives = 93/121 (76.86%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVFR+NGVI+LVEN  A  G               G R+K LVHLPSGQ + SY +
Sbjct: 1   MSGVWVFRNNGVIQLVENPAAEQG-----------DARNGTRRKALVHLPSGQVISSYSY 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LE IL GLGWERYY+GDPDLFQFHK SSIDLISLP +FSKFNSVYMYD+VVKNPN+FHVR
Sbjct: 61  LENILNGLGWERYYDGDPDLFQFHKHSSIDLISLPRDFSKFNSVYMYDIVVKNPNIFHVR 110

Query: 121 E 122
           +
Sbjct: 121 D 110

[Close]
BLAST of Cp4.1LG02g04510 vs. TrEMBL
Match: B9NA04_POPTR (FLOWERING PROMOTING FACTOR 1 family protein OS=Populus trichocarpa GN=POPTR_0018s03780g PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.4e-39
Identity = 83/121 (68.60%), Postives = 95/121 (78.51%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVW F++NGVIRLVEN  A +  G G+G+          R+KVLVHLPSGQ V SY  
Sbjct: 1   MSGVWFFKNNGVIRLVENPAAESNGGNGSGS----------RRKVLVHLPSGQVVSSYSS 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LE+IL  LGWERYY GDPDLFQFHK SSIDLISLP +FSKFNSVYMYD+V+KNPN+FHVR
Sbjct: 61  LEQILNELGWERYYGGDPDLFQFHKQSSIDLISLPRDFSKFNSVYMYDIVIKNPNIFHVR 111

Query: 121 E 122
           +
Sbjct: 121 D 111

[Close]
BLAST of Cp4.1LG02g04510 vs. TrEMBL
Match: V4UBH3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009959mg PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 4.4e-39
Identity = 83/120 (69.17%), Postives = 93/120 (77.50%), Query Frame = 1 

Query: 2   SGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGFL 61
           SGVWVF +NGVIRL+EN QA             S GS   R+KVLVHLP+G+ V SY  L
Sbjct: 8   SGVWVFNTNGVIRLIENPQA------------ESQGSSSSRRKVLVHLPTGEVVSSYSSL 67

Query: 62  EKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVRE 121
           E+IL GLGWERYY GDPDLFQFHK SSIDLISLP +FSKFNSVYMYD+V+KNPNVFHVR+
Sbjct: 68  EQILTGLGWERYYGGDPDLFQFHKHSSIDLISLPRDFSKFNSVYMYDIVIKNPNVFHVRD 115

[Close]
BLAST of Cp4.1LG02g04510 vs. TAIR10
Match: AT4G31380.1 (AT4G31380.1 FPF1-like protein 1)

HSP 1 Score: 150.6 bits (379), Expect = 6.3e-37
Identity = 80/128 (62.50%), Postives = 91/128 (71.09%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGG-----RKKVLVHLPSGQPV 60
           MSGVWVF  NGV+RLVEN           G    SS SGG      R+K+LVHLPS + V
Sbjct: 58  MSGVWVFNKNGVMRLVENPY-----NQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVV 117

Query: 61  CSYGFLEKILEGLGWERYYEGD--PDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKN 120
            SYG LEKIL+ LGWERYY GD    L QFHK +SIDLISLP +FSKFNS++MYD+VVKN
Sbjct: 118 SSYGSLEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKN 177

Query: 121 PNVFHVRE 122
           PNVFHVR+
Sbjct: 178 PNVFHVRD 180

[Close]
BLAST of Cp4.1LG02g04510 vs. TAIR10
Match: AT5G10625.1 (AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1))

HSP 1 Score: 147.9 bits (372), Expect = 4.1e-36
Identity = 76/121 (62.81%), Postives = 87/121 (71.90%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVF +NGVIRLVEN     G  T             GR+ VLV+LP+G+ V SY  
Sbjct: 1   MSGVWVF-NNGVIRLVENPNQSGGVST----------QSHGRRNVLVYLPTGEAVSSYSS 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LE+IL  LGWERY+ GD DL Q+HK SSIDLISLP +FSKFNSVYMYD+VVKNPN FHVR
Sbjct: 61  LEQILRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVR 110

Query: 121 E 122
           +
Sbjct: 121 D 110

[Close]
BLAST of Cp4.1LG02g04510 vs. TAIR10
Match: AT5G24860.1 (AT5G24860.1 flowering promoting factor 1)

HSP 1 Score: 141.7 bits (356), Expect = 2.9e-34
Identity = 76/123 (61.79%), Postives = 92/123 (74.80%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVEN-SQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYG 60
           MSGVWVF+ NGVIRLVEN +Q+G+ T                R+KV+V+LP+G+ V SY 
Sbjct: 1   MSGVWVFK-NGVIRLVENPNQSGSDTQN--------------RRKVMVYLPTGEVVSSYS 60

Query: 61  FLEKILEGLGWERYYEG-DPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFH 120
            LE+IL+ LGWERY+ G D DL QFHK SSIDLISLP +F+KFNSVYMYD+VVKNPN FH
Sbjct: 61  TLEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFH 108

Query: 121 VRE 122
           VR+
Sbjct: 121 VRD 108

[Close]
BLAST of Cp4.1LG02g04510 vs. NCBI nr
Match: gi|449437076|ref|XP_004136318.1| (PREDICTED: flowering-promoting factor 1-like protein 2 [Cucumis sativus])

HSP 1 Score: 209.1 bits (531), Expect = 4.2e-51
Identity = 101/123 (82.11%), Postives = 109/123 (88.62%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAG-TGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYG 60
           MSGVWVFRSNGV+RLVENSQAG   +  G G  +   G GGGRKKVLVHLPSGQPVCSYG
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGDDYSSDGHGHQHHHHGGGGGRKKVLVHLPSGQPVCSYG 60

Query: 61  FLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHV 120
           FL+KILEGLGWERYYEGDPD FQFHK SSIDLISLPM+FSKFNS+YM+DLV+KNPNVFHV
Sbjct: 61  FLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMFDLVIKNPNVFHV 120

Query: 121 REP 123
           REP
Sbjct: 121 REP 123

[Close]
BLAST of Cp4.1LG02g04510 vs. NCBI nr
Match: gi|659132678|ref|XP_008466327.1| (PREDICTED: flowering-promoting factor 1-like protein 2 [Cucumis melo])

HSP 1 Score: 206.8 bits (525), Expect = 2.1e-50
Identity = 105/137 (76.64%), Postives = 109/137 (79.56%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSG---------------SGGGRKKV 60
           MSGVWVFRSNGV+RLVENSQAG         DYSS G                GGGRKKV
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGD--------DYSSDGHHQHHHHHHHHHGGGGGGGRKKV 60

Query: 61  LVHLPSGQPVCSYGFLEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVY 120
           LVHLPSGQPVCSYGFL+KILEGLGWERYYEGDPD FQFHK SSIDLISLPM+FSKFNS+Y
Sbjct: 61  LVHLPSGQPVCSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIY 120

Query: 121 MYDLVVKNPNVFHVREP 123
           MYDLVVKNPNVFHVREP
Sbjct: 121 MYDLVVKNPNVFHVREP 129

[Close]
BLAST of Cp4.1LG02g04510 vs. NCBI nr
Match: gi|568860160|ref|XP_006483594.1| (PREDICTED: flowering-promoting factor 1-like protein 2 [Citrus sinensis])

HSP 1 Score: 170.6 bits (431), Expect = 1.7e-39
Identity = 84/121 (69.42%), Postives = 94/121 (77.69%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVF +NGVIRL+EN QA             S GS   R+KVLVHLP+G+ V SY  
Sbjct: 1   MSGVWVFNTNGVIRLIENPQA------------ESQGSSSSRRKVLVHLPTGEVVSSYSS 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LE+IL GLGWERYY GDPDLFQFHK SSIDLISLP +FSKFNSVYMYD+V+KNPNVFHVR
Sbjct: 61  LEQILTGLGWERYYGGDPDLFQFHKHSSIDLISLPRDFSKFNSVYMYDIVIKNPNVFHVR 109

Query: 121 E 122
           +
Sbjct: 121 D 109

[Close]
BLAST of Cp4.1LG02g04510 vs. NCBI nr
Match: gi|694372573|ref|XP_009363602.1| (PREDICTED: flowering-promoting factor 1-like [Pyrus x bretschneideri])

HSP 1 Score: 170.6 bits (431), Expect = 1.7e-39
Identity = 84/121 (69.42%), Postives = 93/121 (76.86%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVWVF++NGVIRLVEN QA   +                R+K LVHLPSGQ V SY  
Sbjct: 1   MSGVWVFKNNGVIRLVENPQAETSS----------------RRKALVHLPSGQVVSSYSM 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LE+IL GLGWERYYEGDPDLFQFHK SSIDLISLP +FSKFNSVYMYD+V+KNPNVFHVR
Sbjct: 61  LEQILTGLGWERYYEGDPDLFQFHKRSSIDLISLPRDFSKFNSVYMYDIVIKNPNVFHVR 105

Query: 121 E 122
           +
Sbjct: 121 D 105

[Close]
BLAST of Cp4.1LG02g04510 vs. NCBI nr
Match: gi|743903357|ref|XP_011045026.1| (PREDICTED: flowering-promoting factor 1-like [Populus euphratica])

HSP 1 Score: 169.5 bits (428), Expect = 3.7e-39
Identity = 84/121 (69.42%), Postives = 94/121 (77.69%), Query Frame = 1 

Query: 1   MSGVWVFRSNGVIRLVENSQAGAGTGTGTGADYSSSGSGGGRKKVLVHLPSGQPVCSYGF 60
           MSGVW F++NGVIRLVEN  A +  G G          GG R+KVLVHLPSGQ V SY  
Sbjct: 1   MSGVWFFKNNGVIRLVENPAAESNGGNG----------GGSRRKVLVHLPSGQVVSSYSS 60

Query: 61  LEKILEGLGWERYYEGDPDLFQFHKLSSIDLISLPMEFSKFNSVYMYDLVVKNPNVFHVR 120
           LE+IL  LGWERYY GDPDLFQFHK SSIDLISLP +FSKFNSVYMYD+V+KNPN+FHVR
Sbjct: 61  LEQILNELGWERYYGGDPDLFQFHKQSSIDLISLPRDFSKFNSVYMYDIVIKNPNIFHVR 111

Query: 121 E 122
           +
Sbjct: 121 D 111

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g04510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FLP1_ARATH1.1e-3562.50Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana GN=FLP1 PE=2... [more]
FLP2_ARATH7.2e-3562.81Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana GN=FLP2 PE=2... [more]
FPF1_ARATH5.2e-3361.79Flowering-promoting factor 1 OS=Arabidopsis thaliana GN=FPF1 PE=2 SV=1[more]
FPF1_SINAL2.6e-3259.84Flowering-promoting factor 1 OS=Sinapis alba GN=FPF1 PE=2 SV=1[more]
FLP1_ORYSJ1.8e-3061.34Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica GN=R... [more]
BLAST of Cp4.1LG02g04510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHE6_CUCSA2.9e-5182.11Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881700 PE=4 SV=1[more]
A0A067FUZ2_CITSI1.2e-3969.42Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033867mg PE=4 SV=1[more]
A0A068TXC9_COFCA3.4e-3968.60Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034354001 PE=4 SV=1[more]
B9NA04_POPTR3.4e-3968.60FLOWERING PROMOTING FACTOR 1 family protein OS=Populus trichocarpa GN=POPTR_0018... [more]
V4UBH3_9ROSI4.4e-3969.17Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009959mg PE=4 SV=1[more]
BLAST of Cp4.1LG02g04510 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G31380.16.3e-3762.50 FPF1-like protein 1[more]
AT5G10625.14.1e-3662.81 BEST Arabidopsis thaliana protein match is: flowering promoting fact... [more]
AT5G24860.12.9e-3461.79 flowering promoting factor 1[more]
BLAST of Cp4.1LG02g04510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437076|ref|XP_004136318.1|4.2e-5182.11PREDICTED: flowering-promoting factor 1-like protein 2 [Cucumis sativus][more]
gi|659132678|ref|XP_008466327.1|2.1e-5076.64PREDICTED: flowering-promoting factor 1-like protein 2 [Cucumis melo][more]
gi|568860160|ref|XP_006483594.1|1.7e-3969.42PREDICTED: flowering-promoting factor 1-like protein 2 [Citrus sinensis][more]
gi|694372573|ref|XP_009363602.1|1.7e-3969.42PREDICTED: flowering-promoting factor 1-like [Pyrus x bretschneideri][more]
gi|743903357|ref|XP_011045026.1|3.7e-3969.42PREDICTED: flowering-promoting factor 1-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009911 positive regulation of flower development
biological_process GO:0009739 response to gibberellin
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0009909 regulation of flower development
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g04510.1Cp4.1LG02g04510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33433FAMILY NOT NAMEDcoord: 2..120
score: 4.9
NoneNo IPR availablePANTHERPTHR33433:SF3FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1-RELATEDcoord: 2..120
score: 4.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g04510Cucsa.310900Cucumber (Gy14) v1cgycpeB0823
Cp4.1LG02g04510CmaCh09G005190Cucurbita maxima (Rimu)cmacpeB052
Cp4.1LG02g04510CmaCh12G002870Cucurbita maxima (Rimu)cmacpeB191
Cp4.1LG02g04510CmaCh01G015480Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g04510CmoCh09G005100Cucurbita moschata (Rifu)cmocpeB027
Cp4.1LG02g04510CmoCh12G002390Cucurbita moschata (Rifu)cmocpeB167
Cp4.1LG02g04510CmoCh01G015980Cucurbita moschata (Rifu)cmocpeB448
Cp4.1LG02g04510Cla020918Watermelon (97103) v1cpewmB565
Cp4.1LG02g04510Csa3G881700Cucumber (Chinese Long) v2cpecuB553
Cp4.1LG02g04510MELO3C003640Melon (DHL92) v3.5.1cpemeB525
Cp4.1LG02g04510ClCG05G017470Watermelon (Charleston Gray)cpewcgB515
Cp4.1LG02g04510CSPI03G44530Wild cucumber (PI 183967)cpecpiB555
Cp4.1LG02g04510Lsi04G021830Bottle gourd (USVL1VR-Ls)cpelsiB460
Cp4.1LG02g04510Lsi08G011360Bottle gourd (USVL1VR-Ls)cpelsiB478
Cp4.1LG02g04510MELO3C003640.2Melon (DHL92) v3.6.1cpemedB624
Cp4.1LG02g04510CsaV3_3G046970Cucumber (Chinese Long) v3cpecucB0690
Cp4.1LG02g04510Bhi09G001992Wax gourdcpewgoB0720
Cp4.1LG02g04510Carg21157Silver-seed gourdcarcpeB0780
Cp4.1LG02g04510Carg02928Silver-seed gourdcarcpeB0901
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG02g04510Cp4.1LG06g04740Cucurbita pepo (Zucchini)cpecpeB466
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g04510Cucurbita pepo (Zucchini)cpecpeB120
Cp4.1LG02g04510Cucurbita pepo (Zucchini)cpecpeB467
Cp4.1LG02g04510Cucurbita pepo (Zucchini)cpecpeB472
Cp4.1LG02g04510Cucumber (Gy14) v1cgycpeB0436
Cp4.1LG02g04510Cucumber (Gy14) v1cgycpeB0824
Cp4.1LG02g04510Cucurbita maxima (Rimu)cmacpeB053
Cp4.1LG02g04510Cucurbita maxima (Rimu)cmacpeB779
Cp4.1LG02g04510Cucurbita moschata (Rifu)cmocpeB028
Cp4.1LG02g04510Cucurbita moschata (Rifu)cmocpeB733
Cp4.1LG02g04510Wild cucumber (PI 183967)cpecpiB540
Cp4.1LG02g04510Wild cucumber (PI 183967)cpecpiB559
Cp4.1LG02g04510Cucumber (Chinese Long) v2cpecuB538
Cp4.1LG02g04510Cucumber (Chinese Long) v2cpecuB557
Cp4.1LG02g04510Bottle gourd (USVL1VR-Ls)cpelsiB463
Cp4.1LG02g04510Watermelon (Charleston Gray)cpewcgB520
Cp4.1LG02g04510Watermelon (Charleston Gray)cpewcgB529
Cp4.1LG02g04510Watermelon (97103) v1cpewmB542
Cp4.1LG02g04510Watermelon (97103) v1cpewmB570
Cp4.1LG02g04510Melon (DHL92) v3.5.1cpemeB513
Cp4.1LG02g04510Melon (DHL92) v3.5.1cpemeB515
Cp4.1LG02g04510Cucumber (Gy14) v2cgybcpeB223
Cp4.1LG02g04510Cucumber (Gy14) v2cgybcpeB384
Cp4.1LG02g04510Cucumber (Gy14) v2cgybcpeB388
Cp4.1LG02g04510Melon (DHL92) v3.6.1cpemedB610
Cp4.1LG02g04510Melon (DHL92) v3.6.1cpemedB613
Cp4.1LG02g04510Silver-seed gourdcarcpeB0082
Cp4.1LG02g04510Silver-seed gourdcarcpeB0902
Cp4.1LG02g04510Silver-seed gourdcarcpeB1363
Cp4.1LG02g04510Cucumber (Chinese Long) v3cpecucB0673
Cp4.1LG02g04510Cucumber (Chinese Long) v3cpecucB0694
Cp4.1LG02g04510Wax gourdcpewgoB0688
Cp4.1LG02g04510Wax gourdcpewgoB0726