Cp4.1LG02g03360 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g03360
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	BnaC06g38630D protein
Location	Cp4.1LG02 : 3155443 .. 3156279 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTGGGTAGAGAAGCTAAAGGGATTTCATCCACGGATTTGTTGGTTTGTTTTCCTTCTCGATCGCGTTTGGCTTTAATGCCAAATCCGCTTTGTAGTCCAGTGAGGGGTTCTGATTCCAGTAAGCTGCGTCGTAGCCGCCGGAGTTACCATCACCGACGGAGGAAATCGGCGGAGAGTCCGGTGGTATGGGCGAAAGCGAAGACGATGGGGTCGGAGATGTCGGAACCGTCGTCGCCGAAAGTGACATGTGCAGGGCAGGTTAAGATGAGGCGGAAGAACAGGGAGAGGTGGCAGTCGGTGATGGAGGAGATAGAGAGGATTCACAATCGGAGGAAATTACGGCGGAGGAGGAGGGTTAATTGGGTGGAATCTTTAGGGTTTAAGAAAGATATAATGCAAATGTTAACGTGTTTACGCAGCCTCCGGTTTGATTTTAGGTGTTTCAGAGCTTTCCCAGAAGCAGATTTCACGACTGAAGAAGATGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATCTGAAAGCTCCAGAGCTGCATTTTCTAAATGGTTTATGGTTTTACAGGAGAATAGGATGATGAATGGGTGTGCTGTTGATGATGATGCTCCGGTTGCGCCGCCCAAGAACGCGCTTTTGCTAATGCGTTGCAGGTCTGCTCCGGCGAAGAGCTGGGTGGAAGAGAAGGTGAAGAAGAAGAAGAAGAGCTTGAAATGGTTAATGGAGGAAGAGAACAGGGAGAGATTGGCTATGGAAAAGGGGACTGAAATCAGCAGAACGTCGCCGTATTGGCTTACAAGGAGTCGAAGTTGGAAGGTGTGA

mRNA sequence

ATGAAATTGGGTAGAGAAGCTAAAGGGATTTCATCCACGGATTTGTTGGTTTGTTTTCCTTCTCGATCGCGTTTGGCTTTAATGCCAAATCCGCTTTGTAGTCCAGTGAGGGGTTCTGATTCCAGTAAGCTGCGTCGTAGCCGCCGGAGTTACCATCACCGACGGAGGAAATCGGCGGAGAGTCCGGTGGTATGGGCGAAAGCGAAGACGATGGGGTCGGAGATGTCGGAACCGTCGTCGCCGAAAGTGACATGTGCAGGGCAGGTTAAGATGAGGCGGAAGAACAGGGAGAGGTGGCAGTCGGTGATGGAGGAGATAGAGAGGATTCACAATCGGAGGAAATTACGGCGGAGGAGGAGGGTTAATTGGGTGGAATCTTTAGGGTTTAAGAAAGATATAATGCAAATGTTAACGTGTTTACGCAGCCTCCGGTTTGATTTTAGGTGTTTCAGAGCTTTCCCAGAAGCAGATTTCACGACTGAAGAAGATGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATCTGAAAGCTCCAGAGCTGCATTTTCTAAATGGTTTATGGTTTTACAGGAGAATAGGATGATGAATGGGTGTGCTGTTGATGATGATGCTCCGGTTGCGCCGCCCAAGAACGCGCTTTTGCTAATGCGTTGCAGGTCTGCTCCGGCGAAGAGCTGGGTGGAAGAGAAGGTGAAGAAGAAGAAGAAGAGCTTGAAATGGTTAATGGAGGAAGAGAACAGGGAGAGATTGGCTATGGAAAAGGGGACTGAAATCAGCAGAACGTCGCCGTATTGGCTTACAAGGAGTCGAAGTTGGAAGGTGTGA

Coding sequence (CDS)

ATGAAATTGGGTAGAGAAGCTAAAGGGATTTCATCCACGGATTTGTTGGTTTGTTTTCCTTCTCGATCGCGTTTGGCTTTAATGCCAAATCCGCTTTGTAGTCCAGTGAGGGGTTCTGATTCCAGTAAGCTGCGTCGTAGCCGCCGGAGTTACCATCACCGACGGAGGAAATCGGCGGAGAGTCCGGTGGTATGGGCGAAAGCGAAGACGATGGGGTCGGAGATGTCGGAACCGTCGTCGCCGAAAGTGACATGTGCAGGGCAGGTTAAGATGAGGCGGAAGAACAGGGAGAGGTGGCAGTCGGTGATGGAGGAGATAGAGAGGATTCACAATCGGAGGAAATTACGGCGGAGGAGGAGGGTTAATTGGGTGGAATCTTTAGGGTTTAAGAAAGATATAATGCAAATGTTAACGTGTTTACGCAGCCTCCGGTTTGATTTTAGGTGTTTCAGAGCTTTCCCAGAAGCAGATTTCACGACTGAAGAAGATGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATCTGAAAGCTCCAGAGCTGCATTTTCTAAATGGTTTATGGTTTTACAGGAGAATAGGATGATGAATGGGTGTGCTGTTGATGATGATGCTCCGGTTGCGCCGCCCAAGAACGCGCTTTTGCTAATGCGTTGCAGGTCTGCTCCGGCGAAGAGCTGGGTGGAAGAGAAGGTGAAGAAGAAGAAGAAGAGCTTGAAATGGTTAATGGAGGAAGAGAACAGGGAGAGATTGGCTATGGAAAAGGGGACTGAAATCAGCAGAACGTCGCCGTATTGGCTTACAAGGAGTCGAAGTTGGAAGGTGTGA

Protein sequence

MKLGREAKGISSTDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRRRKSAESPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRKNRERWQSVMEEIERIHNRRKLRRRRRVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEEEEEEEEEEESESSRAAFSKWFMVLQENRMMNGCAVDDDAPVAPPKNALLLMRCRSAPAKSWVEEKVKKKKKSLKWLMEEENRERLAMEKGTEISRTSPYWLTRSRSWKV

Homology

[Close]

BLAST of Cp4.1LG02g03360 vs. TrEMBL
Match: A0A0A0L1Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G377750 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 9.5e-98
Identity = 215/312 (68.91%), Postives = 240/312 (76.92%), Query Frame = 1


Query: 1   MKLGRE-AKGISSTDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRRRKSA 60
           MKL RE +KGI S+DLLVCFPSRS LALMPNPLCSP RGSDSSK R   R YH RRRKSA
Sbjct: 1   MKLNREKSKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRYH-RRRKSA 60

Query: 61  ESPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRKNRERWQSVMEEIERIHNRRKLRRRR 120
           ESPVVWAKAKTMGSE+SEPSSPKVTCAGQ+K+R KN + WQSVMEEIERIHNRRKL RRR
Sbjct: 61  ESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKL-RRR 120

Query: 121 RVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEEEEEEEEE--- 180
           R NW+ES GFKKDIMQ LTCLR++RFDFRCFRAFPE DFTTEE+E+EEEEEEEEEE+   
Sbjct: 121 RFNWIESFGFKKDIMQFLTCLRTMRFDFRCFRAFPETDFTTEEEEEEEEEEEEEEEKNQV 180

Query: 181 --EESESSRAAFSKWFMVLQEN------RMMNGCAVDDD----APVAPPKNALLLMRCRS 240
             EE+ESSR AFSKWFMVLQEN      R  N    +DD    A +APP+NALLLMRC+S
Sbjct: 181 GIEENESSRTAFSKWFMVLQENGSNELKRDSNSRCYEDDESIEATMAPPRNALLLMRCKS 240

Query: 241 APAKSWVEEKVK---------------KKKKSLKWLMEEENRERLAMEKGTEISR---TS 279
           APA+ W+EE+ +               K KKSLKWLMEEENRER+ ME GT+  R    +
Sbjct: 241 APARRWMEEESEEEDDEKEKEKEKEKVKVKKSLKWLMEEENRERVVMEMGTDFCRMISDN 300

[Close]

BLAST of Cp4.1LG02g03360 vs. TrEMBL
Match: A0A0D2S772_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G238400 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.1e-64
Identity = 171/340 (50.29%), Postives = 213/340 (62.65%), Query Frame = 1


Query: 4   GREAKGISSTDLLVCFPSRSRLALMP-NPLCSPVRGSDSSKLRRSRRSYHHRRRKSAE-- 63
           GRE KG  S DLLVCFPSR+ L LMP  P+CSP R S+ +K   +   +HHR  K +   
Sbjct: 3   GRETKGAPSADLLVCFPSRAHLTLMPPKPICSPARSSEPNKRHHNHHHHHHRLLKKSSTR 62

Query: 64  ---------SPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRKNR--ERWQSVMEEIERI 123
                    SP++WAK K MGSE++EP+SPKVTCAGQ+K+R K    + WQSVMEEIERI
Sbjct: 63  KGCGAGGQASPLLWAKNKQMGSEITEPTSPKVTCAGQIKVRSKTSSCKSWQSVMEEIERI 122

Query: 124 HNRRKLRRRRRVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEE 183
           HN RK   ++R++WV+SLGFKK++MQ LTCLR++RFDFRCF +FP++D TT +DEDE+E+
Sbjct: 123 HNGRK--HKKRLSWVDSLGFKKEVMQFLTCLRAIRFDFRCFGSFPQSDITT-DDEDEDED 182

Query: 184 EEEEEEE---EESESSRAAFSKWFMVLQENRMMNGC-------------AVDDDAPVAPP 243
           EE +E     + +E+SR  FSKWFMVLQEN+  NG               VDD A   PP
Sbjct: 183 EEPQENHNYVQGNETSRTVFSKWFMVLQENQ-NNGLYREESKEQESSLDHVDDQAAAVPP 242

Query: 244 KNALLLMRCRSAPAKSWVEE-------------------KVKKKKKSLKWLMEEENR--- 278
            NALLLMRCRSAPAKSW+EE                   K +KK+K+L+ LMEEENR   
Sbjct: 243 ANALLLMRCRSAPAKSWLEEANMVEEDEEDQGDKQECKRKDEKKRKNLRSLMEEENRKVK 302

[Close]

BLAST of Cp4.1LG02g03360 vs. TrEMBL
Match: A0A0D2R1U2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G042400 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.5e-63
Identity = 164/339 (48.38%), Postives = 202/339 (59.59%), Query Frame = 1


Query: 4   GREAKGISSTDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRRRKSAE--- 63
           GR+ KG  S DLLVCFPSRSRL LMP P+ SP R S+      + R +HH   K +    
Sbjct: 3   GRKTKGAPSADLLVCFPSRSRLTLMPKPISSPARPSEPDIRHHNHRHHHHPLIKRSRTRN 62

Query: 64  -------SPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRKNR--ERWQSVMEEIERIHN 123
                  SP++WA  K M  E++EPSSPKVTCAGQ+K+R K    + WQSVMEEIERIHN
Sbjct: 63  GSGVGLASPLLWANNKQMRPEITEPSSPKVTCAGQIKVRSKTTSCKTWQSVMEEIERIHN 122

Query: 124 RRKLRRRRRVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEEEE 183
            R  R ++R  W+ESLGFKK++MQ  TCLRS+RFDFRCFR+FP++D TTE+D+DE+EE +
Sbjct: 123 SR--RHKKRPGWIESLGFKKEVMQFFTCLRSIRFDFRCFRSFPQSDITTEDDDDEDEESQ 182

Query: 184 EEE---EEEESESSRAAFSKWFMVLQEN-----------RMMNGCAVDDDAPVA-PPKNA 243
           E      +++ E+SR  FSKWFMVLQEN           +  +   VDDDA  A PP NA
Sbjct: 183 ENHNHIHDDDKEASRTVFSKWFMVLQENQNDGLLKEEKGKSHDVDVVDDDAQTAVPPPNA 242

Query: 244 LLLMRCRSAPAKSWVEEKVK-------------------KKKKSLKWLMEEENRER---- 278
           LLLMRCRSAPAKSW++E VK                   KK K+L+ LMEEENR+     
Sbjct: 243 LLLMRCRSAPAKSWLKENVKDEENIQNDDEEEECKKKCEKKTKNLRSLMEEENRKTTTQS 302

[Close]

BLAST of Cp4.1LG02g03360 vs. TrEMBL
Match: V7AVI6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G029900g PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.9e-63
Identity = 157/297 (52.86%), Postives = 192/297 (64.65%), Query Frame = 1


Query: 4   GREAKGIS----STDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRRRKSA 63
           GRE K ++    S DLLVCFPSR+ L LMP P+CSP R S+ +K  R   S+HH R+KS 
Sbjct: 4   GREGKALAQAPPSADLLVCFPSRAHLTLMPKPICSPARPSEPTK--RHHNSHHHHRKKSF 63

Query: 64  E--------SPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRKNR--ERWQSVMEEIERI 123
                    SP++WAK K+MGSE++EP+SPKVTCAGQ+K+R K      WQSVMEEIE+I
Sbjct: 64  SRGGGGGQASPLLWAKTKSMGSEITEPTSPKVTCAGQIKVRPKTTACRSWQSVMEEIEKI 123

Query: 124 HNRRKLRRRRRVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEE 183
           H  +K  +R+R+ W ESLGFKK+IMQ LTCLRS+RFDFRCF +FP  D  TEE++D+EEE
Sbjct: 124 HTDKK--QRKRLGWAESLGFKKEIMQFLTCLRSIRFDFRCFGSFPGTDIATEEEDDDEEE 183

Query: 184 EEEEEE-------EEESESSRAAFSKWFMVLQENRMM-------NGCAVDDDAPVAPPKN 243
           E EEEE       E E+E+SR  FSKWFMVLQEN+          G   +  +   PP N
Sbjct: 184 EVEEEEENHVGVGENENEASRTVFSKWFMVLQENQNKRREETEERGNDEESVSVSVPPSN 243

Query: 244 ALLLMRCRSAPAKSWVEEK--------------------VKKKKKSLKWLMEEENRE 253
           ALLLMRCRSAPAKSWV E+                      KK +SLK LMEEE R+
Sbjct: 244 ALLLMRCRSAPAKSWVREREGGEEEENVEREKGKEKDEVAVKKGQSLKSLMEEEKRK 296

[Close]

BLAST of Cp4.1LG02g03360 vs. TrEMBL
Match: M5XPQ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016976mg PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.9e-61
Identity = 150/301 (49.83%), Postives = 194/301 (64.45%), Query Frame = 1


Query: 5   REAKGISSTDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRR-------RK 64
           REAKG  S DLLVCFPSR+ L LMP P+CSP R S+ +K  +  +++HH+        +K
Sbjct: 4   REAKGALSADLLVCFPSRTSLKLMPKPICSPARPSEPNKRHQYNQNHHHQPHHHQQLVKK 63

Query: 65  SA--------ESPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRKNR--ERWQSVMEEIE 124
           S+         SP++WAK K MGSE+SEP+SPKVTCAGQ+K+R K+   + WQSVMEEIE
Sbjct: 64  SSIGKSSLGQASPLLWAKTKPMGSEISEPTSPKVTCAGQIKVRHKSGSCKSWQSVMEEIE 123

Query: 125 RIHNRRKLRRRRRVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEE 184
           RIHN +K R++RR  W E+LGFKK++MQ LTCLR++RFDFRCF +FP+ D +++EDE+EE
Sbjct: 124 RIHNNKKQRKQRRPGWAEALGFKKEVMQFLTCLRNIRFDFRCFGSFPQPDISSDEDEEEE 183

Query: 185 EEEEEEEEEE-----------ESESSRAAFSKWFMVLQENRMMNGCAVD----------- 244
           EEE  +  E            +  SSRA FSKWFMVLQEN+    C  D           
Sbjct: 184 EEENRDCRENHVGGEGISDGGDQSSSRAMFSKWFMVLQENQSNGVCTEDKKERNDRQSLD 243

Query: 245 ------DDAPVA--PPKNALLLMRCRSAPAKSWVEEKVKKKKKSLKWLMEEENRERLAME 259
                  + PVA  PP NALLLMRCRSAPAK+W+EEK ++++       E+E  E    E
Sbjct: 244 DEVGSTSEVPVASVPPPNALLLMRCRSAPAKTWLEEKEEEEEDD-----EDEEEEEKEAE 299

[Close]

BLAST of Cp4.1LG02g03360 vs. TAIR10
Match: AT1G78110.1 (AT1G78110.1 unknown protein)

HSP 1 Score: 207.6 bits (527), Expect = 9.8e-54
Identity = 143/288 (49.65%), Postives = 177/288 (61.46%), Query Frame = 1


Query: 12  STDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRRRKSA---------ESP 71
           S DLLVCFPSR+ LAL P P+CSP R SDSS  RR     HHRR+ S           SP
Sbjct: 17  SADLLVCFPSRTHLALTPKPICSPSRPSDSSTNRRP----HHRRQLSKLSGGGGGGHGSP 76

Query: 72  VVWAK---AKTMGS-EMSEPSSPKVTCAGQVKMRRKN----RERWQSVMEEIERIHNRRK 131
           V+WAK   +K MG  E++EP+SPKVTCAGQ+K+R        + WQSVMEEIERIH+ R 
Sbjct: 77  VLWAKQASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIERIHDNRS 136

Query: 132 LRRRRRVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEEEEEEE 191
             +          G KKD+M  LTCLR+++FDFRCF  F  AD T+++DE+E+++++EEE
Sbjct: 137 QSK--------FFGLKKDVMGFLTCLRNIKFDFRCFGDFRHADVTSDDDEEEDDDDDEEE 196

Query: 192 ---EEEESESSRAAFSKWFMVLQE-------NRMMNGCAVDDD------APVAPPKNALL 251
              E EE E+S+  FSKWFMVLQE       ++  N C    D       P  PP NALL
Sbjct: 197 EVVEGEEEENSKTVFSKWFMVLQEEQNNKDDDKNNNKCDEKRDLEDTETEPAVPPPNALL 256

Query: 252 LMRCRSAPAKSWVEEKVKKKKKSLKWLMEEENRERLAMEKGTEISRTS 267
           LMRCRSAPAKSW+EE++K K        E+E RE    EK TE   TS
Sbjct: 257 LMRCRSAPAKSWLEERMKVK-------TEQEKREEQKEEKETEDQETS 285

[Close]

BLAST of Cp4.1LG02g03360 vs. TAIR10
Match: AT1G22230.1 (AT1G22230.1 unknown protein)

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-40
Identity = 129/316 (40.82%), Postives = 162/316 (51.27%), Query Frame = 1


Query: 12  STDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRRRKSAESPVVWAKAKTM 71
           S DL+VCFPSR+ L+L    + SP     SS   R + + HHRR  S  S       +  
Sbjct: 13  SADLMVCFPSRAHLSLPSKSISSP-----SSSFNRRQNAPHHRRSISKLSSSGGGVRQNR 72

Query: 72  GSE---MSEPSSPKVTCAGQVKMRRKNRE----RWQSVMEEIERIHNRRKLRRRRRVNWV 131
           G     + EP+SPKVTCAGQ+K+R   R+     WQS+M EIE+IH        R  +  
Sbjct: 73  GGGREVVEEPTSPKVTCAGQIKVRSSKRDGGGKNWQSLMAEIEKIH--------RSKSES 132

Query: 132 ESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEEEEEEEEEEESESSRA 191
           +  G K+D+M  LTCLR   FDFRCF AFP  D  ++++E++EEEEEE+EEE+E ESS  
Sbjct: 133 KFFGIKRDVMGFLTCLRD--FDFRCFGAFPPVDIISDDEEEDEEEEEEDEEEDEDESSGT 192

Query: 192 AFSKWFMVLQENRMMNGC------AVDDDAPVAPPKNALLLMRCRSAPAKSWVEEKVKK- 251
            FSKW MVL E +    C         D     PP NALLLMRCRSAP K+W EEK ++ 
Sbjct: 193 VFSKWLMVLHEKQNNEECVDGKENVFSDVETAVPPPNALLLMRCRSAPVKNWSEEKKEET 252

Query: 252 ----------------------KKKSLKWLMEEENRERL-AMEKGTEISRTS-----PYW 278
                                  KK L+ LMEEE +  L  M   T   + S       W
Sbjct: 253 EEGDNRVKQSGEEEEEEKDRVGNKKDLRSLMEEEKKMNLVVMNYDTNYYKLSNDIAKETW 312

[Close]

BLAST of Cp4.1LG02g03360 vs. NCBI nr
Match: gi|778694516|ref|XP_004142611.2| (PREDICTED: transcription initiation factor IIE subunit alpha-like [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 1.4e-97
Identity = 215/312 (68.91%), Postives = 240/312 (76.92%), Query Frame = 1


Query: 1   MKLGRE-AKGISSTDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRRRKSA 60
           MKL RE +KGI S+DLLVCFPSRS LALMPNPLCSP RGSDSSK R   R YH RRRKSA
Sbjct: 11  MKLNREKSKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRYH-RRRKSA 70

Query: 61  ESPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRKNRERWQSVMEEIERIHNRRKLRRRR 120
           ESPVVWAKAKTMGSE+SEPSSPKVTCAGQ+K+R KN + WQSVMEEIERIHNRRKL RRR
Sbjct: 71  ESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKL-RRR 130

Query: 121 RVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEEEEEEEEE--- 180
           R NW+ES GFKKDIMQ LTCLR++RFDFRCFRAFPE DFTTEE+E+EEEEEEEEEE+   
Sbjct: 131 RFNWIESFGFKKDIMQFLTCLRTMRFDFRCFRAFPETDFTTEEEEEEEEEEEEEEEKNQV 190

Query: 181 --EESESSRAAFSKWFMVLQEN------RMMNGCAVDDD----APVAPPKNALLLMRCRS 240
             EE+ESSR AFSKWFMVLQEN      R  N    +DD    A +APP+NALLLMRC+S
Sbjct: 191 GIEENESSRTAFSKWFMVLQENGSNELKRDSNSRCYEDDESIEATMAPPRNALLLMRCKS 250

Query: 241 APAKSWVEEKVK---------------KKKKSLKWLMEEENRERLAMEKGTEISR---TS 279
           APA+ W+EE+ +               K KKSLKWLMEEENRER+ ME GT+  R    +
Sbjct: 251 APARRWMEEESEEEDDEKEKEKEKEKVKVKKSLKWLMEEENRERVVMEMGTDFCRMISDN 310

[Close]

BLAST of Cp4.1LG02g03360 vs. NCBI nr
Match: gi|700199454|gb|KGN54612.1| (hypothetical protein Csa_4G377750 [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 1.4e-97
Identity = 215/312 (68.91%), Postives = 240/312 (76.92%), Query Frame = 1


Query: 1   MKLGRE-AKGISSTDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRRRKSA 60
           MKL RE +KGI S+DLLVCFPSRS LALMPNPLCSP RGSDSSK R   R YH RRRKSA
Sbjct: 1   MKLNREKSKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRYH-RRRKSA 60

Query: 61  ESPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRKNRERWQSVMEEIERIHNRRKLRRRR 120
           ESPVVWAKAKTMGSE+SEPSSPKVTCAGQ+K+R KN + WQSVMEEIERIHNRRKL RRR
Sbjct: 61  ESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKL-RRR 120

Query: 121 RVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEEEEEEEEE--- 180
           R NW+ES GFKKDIMQ LTCLR++RFDFRCFRAFPE DFTTEE+E+EEEEEEEEEE+   
Sbjct: 121 RFNWIESFGFKKDIMQFLTCLRTMRFDFRCFRAFPETDFTTEEEEEEEEEEEEEEEKNQV 180

Query: 181 --EESESSRAAFSKWFMVLQEN------RMMNGCAVDDD----APVAPPKNALLLMRCRS 240
             EE+ESSR AFSKWFMVLQEN      R  N    +DD    A +APP+NALLLMRC+S
Sbjct: 181 GIEENESSRTAFSKWFMVLQENGSNELKRDSNSRCYEDDESIEATMAPPRNALLLMRCKS 240

Query: 241 APAKSWVEEKVK---------------KKKKSLKWLMEEENRERLAMEKGTEISR---TS 279
           APA+ W+EE+ +               K KKSLKWLMEEENRER+ ME GT+  R    +
Sbjct: 241 APARRWMEEESEEEDDEKEKEKEKEKVKVKKSLKWLMEEENRERVVMEMGTDFCRMISDN 300

[Close]

BLAST of Cp4.1LG02g03360 vs. NCBI nr
Match: gi|659086790|ref|XP_008444111.1| (PREDICTED: uncharacterized protein LOC103487551 [Cucumis melo])

HSP 1 Score: 356.7 bits (914), Expect = 3.7e-95
Identity = 211/304 (69.41%), Postives = 236/304 (77.63%), Query Frame = 1


Query: 1   MKLGRE-AKGISSTDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRRRKSA 60
           MKL RE +KGI S DLLVCFPSRS LALMPNPLCSP RGSDSSK R   R +H RRRKSA
Sbjct: 8   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFH-RRRKSA 67

Query: 61  ESPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRKNRERWQSVMEEIERIHNRRKLRRRR 120
           ESPVVWAKAKTMGSE+SEPSSPKVTCAGQ+K+R KN + WQSVMEEIERIHNRRKL RRR
Sbjct: 68  ESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKL-RRR 127

Query: 121 RVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEEEEEEEEE--- 180
           R  WVES GFKKDIMQ LTCLR++RFDFRCFRAFPE DFTTEE+E+EEEEEE+E+ +   
Sbjct: 128 RFRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGI 187

Query: 181 EESESSRAAFSKWFMVLQEN-------RMMNGCAVDD---DAPVAPPKNALLLMRCRSAP 240
           EE+ESSR AFSKWFMVLQEN          + C  DD   +A +APP NALLLMRCRSAP
Sbjct: 188 EENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAP 247

Query: 241 AKSWVEEKVK---------KKKKSLKWLMEEENRERLAMEKGTEISR---TSPYWLTRSR 279
           A+ W+EE+ +         K KKSLKWLMEEENRERL +E GT+  R    +    TRS+
Sbjct: 248 ARRWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQ 307

[Close]

BLAST of Cp4.1LG02g03360 vs. NCBI nr
Match: gi|823227546|ref|XP_012446579.1| (PREDICTED: uncharacterized protein LOC105770075 [Gossypium raimondii])

HSP 1 Score: 255.0 bits (650), Expect = 1.5e-64
Identity = 171/340 (50.29%), Postives = 213/340 (62.65%), Query Frame = 1


Query: 4   GREAKGISSTDLLVCFPSRSRLALMP-NPLCSPVRGSDSSKLRRSRRSYHHRRRKSAE-- 63
           GRE KG  S DLLVCFPSR+ L LMP  P+CSP R S+ +K   +   +HHR  K +   
Sbjct: 3   GRETKGAPSADLLVCFPSRAHLTLMPPKPICSPARSSEPNKRHHNHHHHHHRLLKKSSTR 62

Query: 64  ---------SPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRKNR--ERWQSVMEEIERI 123
                    SP++WAK K MGSE++EP+SPKVTCAGQ+K+R K    + WQSVMEEIERI
Sbjct: 63  KGCGAGGQASPLLWAKNKQMGSEITEPTSPKVTCAGQIKVRSKTSSCKSWQSVMEEIERI 122

Query: 124 HNRRKLRRRRRVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEE 183
           HN RK   ++R++WV+SLGFKK++MQ LTCLR++RFDFRCF +FP++D TT +DEDE+E+
Sbjct: 123 HNGRK--HKKRLSWVDSLGFKKEVMQFLTCLRAIRFDFRCFGSFPQSDITT-DDEDEDED 182

Query: 184 EEEEEEE---EESESSRAAFSKWFMVLQENRMMNGC-------------AVDDDAPVAPP 243
           EE +E     + +E+SR  FSKWFMVLQEN+  NG               VDD A   PP
Sbjct: 183 EEPQENHNYVQGNETSRTVFSKWFMVLQENQ-NNGLYREESKEQESSLDHVDDQAAAVPP 242

Query: 244 KNALLLMRCRSAPAKSWVEE-------------------KVKKKKKSLKWLMEEENR--- 278
            NALLLMRCRSAPAKSW+EE                   K +KK+K+L+ LMEEENR   
Sbjct: 243 ANALLLMRCRSAPAKSWLEEANMVEEDEEDQGDKQECKRKDEKKRKNLRSLMEEENRKVK 302

[Close]

BLAST of Cp4.1LG02g03360 vs. NCBI nr
Match: gi|823237968|ref|XP_012451628.1| (PREDICTED: uncharacterized protein LOC105773948 [Gossypium raimondii])

HSP 1 Score: 251.1 bits (640), Expect = 2.2e-63
Identity = 164/339 (48.38%), Postives = 202/339 (59.59%), Query Frame = 1


Query: 4   GREAKGISSTDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRRRKSAE--- 63
           GR+ KG  S DLLVCFPSRSRL LMP P+ SP R S+      + R +HH   K +    
Sbjct: 3   GRKTKGAPSADLLVCFPSRSRLTLMPKPISSPARPSEPDIRHHNHRHHHHPLIKRSRTRN 62

Query: 64  -------SPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRKNR--ERWQSVMEEIERIHN 123
                  SP++WA  K M  E++EPSSPKVTCAGQ+K+R K    + WQSVMEEIERIHN
Sbjct: 63  GSGVGLASPLLWANNKQMRPEITEPSSPKVTCAGQIKVRSKTTSCKTWQSVMEEIERIHN 122

Query: 124 RRKLRRRRRVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEEEE 183
            R  R ++R  W+ESLGFKK++MQ  TCLRS+RFDFRCFR+FP++D TTE+D+DE+EE +
Sbjct: 123 SR--RHKKRPGWIESLGFKKEVMQFFTCLRSIRFDFRCFRSFPQSDITTEDDDDEDEESQ 182

Query: 184 EEE---EEEESESSRAAFSKWFMVLQEN-----------RMMNGCAVDDDAPVA-PPKNA 243
           E      +++ E+SR  FSKWFMVLQEN           +  +   VDDDA  A PP NA
Sbjct: 183 ENHNHIHDDDKEASRTVFSKWFMVLQENQNDGLLKEEKGKSHDVDVVDDDAQTAVPPPNA 242

Query: 244 LLLMRCRSAPAKSWVEEKVK-------------------KKKKSLKWLMEEENRER---- 278
           LLLMRCRSAPAKSW++E VK                   KK K+L+ LMEEENR+     
Sbjct: 243 LLLMRCRSAPAKSWLKENVKDEENIQNDDEEEECKKKCEKKTKNLRSLMEEENRKTTTQS 302

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g03360 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g03360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1Z4_CUCSA	9.5e-98	68.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G377750 PE=4 SV=1	[more]
A0A0D2S772_GOSRA	1.1e-64	50.29	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G238400 PE=4 SV=1	[more]
A0A0D2R1U2_GOSRA	1.5e-63	48.38	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G042400 PE=4 SV=1	[more]
V7AVI6_PHAVU	9.9e-63	52.86	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G029900g PE=4 SV=1	[more]
M5XPQ0_PRUPE	1.9e-61	49.83	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016976mg PE=4 SV=1	[more]

BLAST of Cp4.1LG02g03360 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78110.1	9.8e-54	49.65	unknown protein	[more]
AT1G22230.1	2.1e-40	40.82	unknown protein	[more]

BLAST of Cp4.1LG02g03360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778694516\|ref\|XP_004142611.2\|	1.4e-97	68.91	PREDICTED: transcription initiation factor IIE subunit alpha-like [Cucumis sativ...	[more]
gi\|700199454\|gb\|KGN54612.1\|	1.4e-97	68.91	hypothetical protein Csa_4G377750 [Cucumis sativus]	[more]
gi\|659086790\|ref\|XP_008444111.1\|	3.7e-95	69.41	PREDICTED: uncharacterized protein LOC103487551 [Cucumis melo]	[more]
gi\|823227546\|ref\|XP_012446579.1\|	1.5e-64	50.29	PREDICTED: uncharacterized protein LOC105770075 [Gossypium raimondii]	[more]
gi\|823237968\|ref\|XP_012451628.1\|	2.2e-63	48.38	PREDICTED: uncharacterized protein LOC105773948 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g03360.1	Cp4.1LG02g03360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 156..184 score: -coord: 232..252 scor
None	No IPR available	PANTHER	PTHR33448	FAMILY NOT NAMED	coord: 4..277 score: 1.0
None	No IPR available	PANTHER	PTHR33448:SF3	SUBFAMILY NOT NAMED	coord: 4..277 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG02g03360	CmaCh09G006550	Cucurbita maxima (Rimu)	cmacpeB047
Cp4.1LG02g03360	CmaCh01G014120	Cucurbita maxima (Rimu)	cmacpeB490
Cp4.1LG02g03360	CmoCh09G006400	Cucurbita moschata (Rifu)	cmocpeB022
Cp4.1LG02g03360	Cla023137	Watermelon (97103) v1	cpewmB581
Cp4.1LG02g03360	Csa4G377750	Cucumber (Chinese Long) v2	cpecuB574
Cp4.1LG02g03360	MELO3C010430	Melon (DHL92) v3.5.1	cpemeB544
Cp4.1LG02g03360	ClCG11G015440	Watermelon (Charleston Gray)	cpewcgB488
Cp4.1LG02g03360	CSPI04G18280	Wild cucumber (PI 183967)	cpecpiB575
Cp4.1LG02g03360	MELO3C010430.2	Melon (DHL92) v3.6.1	cpemedB645
Cp4.1LG02g03360	CsaV3_4G028650	Cucumber (Chinese Long) v3	cpecucB0711
Cp4.1LG02g03360	Bhi09G002208	Wax gourd	cpewgoB0713
Cp4.1LG02g03360	CsGy4G017360	Cucumber (Gy14) v2	cgybcpeB548
Cp4.1LG02g03360	Carg00360	Silver-seed gourd	carcpeB0943
Cp4.1LG02g03360	Carg03067	Silver-seed gourd	carcpeB0899

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG02g03360	Cp4.1LG06g05060	Cucurbita pepo (Zucchini)	cpecpeB461

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG02g03360	Silver-seed gourd	carcpeB1160
Cp4.1LG02g03360	Cucurbita pepo (Zucchini)	cpecpeB215
Cp4.1LG02g03360	Cucurbita pepo (Zucchini)	cpecpeB389
Cp4.1LG02g03360	Cucurbita pepo (Zucchini)	cpecpeB468
Cp4.1LG02g03360	Cucurbita maxima (Rimu)	cmacpeB054
Cp4.1LG02g03360	Cucurbita maxima (Rimu)	cmacpeB325
Cp4.1LG02g03360	Cucurbita maxima (Rimu)	cmacpeB743
Cp4.1LG02g03360	Cucurbita moschata (Rifu)	cmocpeB029
Cp4.1LG02g03360	Cucurbita moschata (Rifu)	cmocpeB289
Cp4.1LG02g03360	Cucurbita moschata (Rifu)	cmocpeB448
Cp4.1LG02g03360	Cucurbita moschata (Rifu)	cmocpeB697
Cp4.1LG02g03360	Bottle gourd (USVL1VR-Ls)	cpelsiB455