Cp4.1LG01g26340 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g26340
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	SNARE-like superfamily protein isoform 1
Location	Cp4.1LG01 : 21182302 .. 21183129 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCGGATCATAGCAAAATTTACTACTGTTCTGTTTCAAGGGGCGAACGTATGCTCTATGTGTATAGTAATGGTGACCAGGAGATTGAGAATTTGGCTGATTTATGCTTGAAAAGTGCCCCTCCCTTTCACAAGTGGTATTTTGAGACATTGGGTAAAAAAGCTTATGGGTTCTTGATGAAAGAAGGGTATATTTATTTTGCAATTGCTGATGAAGTTATTGGTAATCAGGCTCTTCTTCAGTTTCTAGAGCAGTTGAGAGATGAATTCATAAAGGTAGCAAGGAAGGGTTCACGAGGGAGTTTCTCAACTGTGAACTTCATTAGTCTGCAGGAACAGTTACTGCCTGCAATTCGTAAATTAATCACCTCTCTTGAGAATGTCTCCAATAGCGGTAAGGATTGGATGGCTGAAACCCCTTCCTCGAACAATGGCCTATCTCCATCTCCGAGTAATGTGAATGGCCAAGTTGACATTTTGGCTTCCACGAAAGCCCCTCTGTTGGGGAAGTTAAGCAAACCAGAGAAGAAAAAGGGAAAGGACCATGTGATTACAATGAGAGGTATTGAGATGGAGGAGCAAAGAAAGTCTACAGATAGAGGTTTGAAGGTTGATTCGGTTTCGTTGGAATCTGGTAATCAGGGTGGATCGGGGTCTTCAATTCCAGTGGAGAAAGACATCAATCCATTGAGGAGATCAAGCTCAAGCATCCGGAGAAGGTGGTGGCGTCACGTGAGGATCGCACTTGCTGTTGATGCTGCTGTGTGTCTGATATTGTTTGTCATTTGGTTGATTATCTGTAACGGAATTTCTTGTGTCCGCTGA

mRNA sequence

ATGAATCCGGATCATAGCAAAATTTACTACTGTTCTGTTTCAAGGGGCGAACGTATGCTCTATGTGTATAGTAATGGTGACCAGGAGATTGAGAATTTGGCTGATTTATGCTTGAAAAGTGCCCCTCCCTTTCACAAGTGCGGTAAGGATTGGATGGCTGAAACCCCTTCCTCGAACAATGGCCTATCTCCATCTCCGAGTAATGTGAATGGCCAAGTTGACATTTTGGCTTCCACGAAAGCCCCTCTGTTGGGGAAGTTAAGCAAACCAGAGAAGAAAAAGGGAAAGGACCATGTGATTACAATGAGAGGTATTGAGATGGAGGAGCAAAGAAAGTCTACAGATAGAGGTTTGAAGGTTGATTCGGTTTCGTTGGAATCTGGTAATCAGGGTGGATCGGGGTCTTCAATTCCAGTGGAGAAAGACATCAATCCATTGAGGAGATCAAGCTCAAGCATCCGGAGAAGGTGGTGGCGTCACGTGAGGATCGCACTTGCTGTTGATGCTGCTGTGTGTCTGATATTGTTTGTCATTTGGTTGATTATCTGTAACGGAATTTCTTGTGTCCGCTGA

Coding sequence (CDS)

ATGAATCCGGATCATAGCAAAATTTACTACTGTTCTGTTTCAAGGGGCGAACGTATGCTCTATGTGTATAGTAATGGTGACCAGGAGATTGAGAATTTGGCTGATTTATGCTTGAAAAGTGCCCCTCCCTTTCACAAGTGCGGTAAGGATTGGATGGCTGAAACCCCTTCCTCGAACAATGGCCTATCTCCATCTCCGAGTAATGTGAATGGCCAAGTTGACATTTTGGCTTCCACGAAAGCCCCTCTGTTGGGGAAGTTAAGCAAACCAGAGAAGAAAAAGGGAAAGGACCATGTGATTACAATGAGAGGTATTGAGATGGAGGAGCAAAGAAAGTCTACAGATAGAGGTTTGAAGGTTGATTCGGTTTCGTTGGAATCTGGTAATCAGGGTGGATCGGGGTCTTCAATTCCAGTGGAGAAAGACATCAATCCATTGAGGAGATCAAGCTCAAGCATCCGGAGAAGGTGGTGGCGTCACGTGAGGATCGCACTTGCTGTTGATGCTGCTGTGTGTCTGATATTGTTTGTCATTTGGTTGATTATCTGTAACGGAATTTCTTGTGTCCGCTGA

Protein sequence

MNPDHSKIYYCSVSRGERMLYVYSNGDQEIENLADLCLKSAPPFHKCGKDWMAETPSSNNGLSPSPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIEMEEQRKSTDRGLKVDSVSLESGNQGGSGSSIPVEKDINPLRRSSSSIRRRWWRHVRIALAVDAAVCLILFVIWLIICNGISCVR

Homology

[Close]

BLAST of Cp4.1LG01g26340 vs. Swiss-Prot
Match: PHL11_ARATH (Phytolongin Phyl1.1 OS=Arabidopsis thaliana GN=PHYL1.1 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.5e-20
Identity = 67/134 (50.00%), Postives = 81/134 (60.45%), Query Frame = 1


Query: 57  SSNNGLSPSPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIEMEEQRKSTDR 116
           SSNN L  S  N+  Q +   STKAPLLG+LSK EKKKGKDHVI     E+EE RKS DR
Sbjct: 134 SSNNELKSS--NLGEQSEGSNSTKAPLLGRLSKQEKKKGKDHVI-----ELEEHRKSNDR 193

Query: 117 GLKVDSVSLESGNQGGSGSSIPVEKDINPLRRSSSSIRRRWWRHVRIALAVDAAVCLILF 176
           G   D       +  G+G+S+  E   +  R  + S   +W R V+I LA+DAA+CL LF
Sbjct: 194 GNITD-------DSAGAGTSLEKECVSSSGRSVTQSFEWKWRRLVQIVLAIDAAICLTLF 253

Query: 177 VIWLIICNGISCVR 191
            IWL IC GI C R
Sbjct: 254 GIWLAICRGIECTR 253

[Close]

BLAST of Cp4.1LG01g26340 vs. Swiss-Prot
Match: PHL12_ARATH (Phytolongin Phyl1.2 OS=Arabidopsis thaliana GN=PHYL1.2 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.6e-18
Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = 1


Query: 65  SPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIEMEEQRKSTDRGLKVDSVS 124
           SPS    +    +++KAPLLG+ +K +KKKG+DH  ++RGIE+EE RKS DRG    +V+
Sbjct: 137 SPSIDGAEQSYASNSKAPLLGRSNKQDKKKGRDHAHSLRGIEIEEHRKSNDRG----NVT 196

Query: 125 LESGNQGGSGSSIPVEKDINPLRR----SSSSIRRRWWRHVRIALAVDAAVCLILFVIWL 184
             S     S + +P        RR     S SI R+W R V+I LA+D A+CL L  +WL
Sbjct: 197 ECSNASSESATYVP--------RRGRSGGSQSIERKWRRQVKIVLAIDIAICLTLLGVWL 254

Query: 185 IICNGISCVR 191
            IC+GI C R
Sbjct: 257 AICHGIECTR 254

[Close]

BLAST of Cp4.1LG01g26340 vs. TrEMBL
Match: A0A0A0LMR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401480 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.1e-65
Identity = 137/180 (76.11%), Postives = 152/180 (84.44%), Query Frame = 1


Query: 12  SVSRGERMLYVYSNGDQEIENLADLCLKSAPPFHKCGKDWMAETPSSNNGLSPSPSNVNG 71
           S+S  E+++ V S     +EN++          H   KDWMAETPSSNNGLSPSPSNVNG
Sbjct: 108 SISLQEQLVPVISKLITSLENVS----------HN-SKDWMAETPSSNNGLSPSPSNVNG 167

Query: 72  QVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIEMEEQRKSTDRGLKVDSVSLESGNQG 131
           QVD+LASTKAPLLGK +KPEKKKGKDHVITMRGIEMEE RKSTDRGLK+DSVSLES NQG
Sbjct: 168 QVDVLASTKAPLLGKSNKPEKKKGKDHVITMRGIEMEEHRKSTDRGLKIDSVSLESSNQG 227

Query: 132 GSGSSIPVEKDINPLRRSSS-SIRRRWWRHVRIALAVDAAVCLILFVIWLIICNGISCVR 191
           GSGS+IPV+KD NPLRRS+S SIRRRWWRHVRIALAVDA VCLILFVIWLI+CNG+SCVR
Sbjct: 228 GSGSAIPVQKDSNPLRRSNSQSIRRRWWRHVRIALAVDAVVCLILFVIWLIVCNGVSCVR 276

[Close]

BLAST of Cp4.1LG01g26340 vs. TrEMBL
Match: B9S6Y1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1329410 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-42
Identity = 93/146 (63.70%), Postives = 112/146 (76.71%), Query Frame = 1


Query: 48  GKDWMAETPSSNN-GLSPSPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIE 107
           G DW  ET SS N GLSPSPS+ NG ++I  STKAPLLGK +K EKKK KDHVI MR IE
Sbjct: 142 GNDWKTETSSSENMGLSPSPSDANGLIEIHTSTKAPLLGKSNKQEKKKSKDHVIVMRDIE 201

Query: 108 MEEQRKSTDRGLKVDSVSLESGNQGGSGSSIPVEKDINP--LRRSSSSIRRRWWRHVRIA 167
           +EE RKSTDRG++VDS SL+S NQGG  S++ ++KD+    +R S+ SIR++WWR VRI 
Sbjct: 202 LEEHRKSTDRGVRVDSTSLDSNNQGGVASAMSLQKDMGSMRIRSSAQSIRKKWWRQVRIV 261

Query: 168 LAVDAAVCLILFVIWLIICNGISCVR 191
           LA+DAAVCLILFVIW+ IC G  C R
Sbjct: 262 LAIDAAVCLILFVIWMSICGGFGCTR 287

[Close]

BLAST of Cp4.1LG01g26340 vs. TrEMBL
Match: A0A061E180_THECC (SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_007384 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-42
Identity = 92/146 (63.01%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 48  GKDWMAETPSSNN-GLSPSPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIE 107
           G DW AETPSS++ GLSPSPSN N Q++  +STKAPLLGK S+ EKKK KDHV+ +R IE
Sbjct: 177 GNDWKAETPSSDHAGLSPSPSNANAQLEAASSTKAPLLGKSSRQEKKKLKDHVVAVRDIE 236

Query: 108 MEEQRKSTDRGLKVDSVSLESGNQGGSGSSIPVEKDINP--LRRSSSSIRRRWWRHVRIA 167
           +EE RKSTDRG+KV+S +L+S NQ G+ SSI ++KD+    +R  S +IR++WWR VRI 
Sbjct: 237 LEEHRKSTDRGVKVNSTALDSNNQNGASSSISLQKDLGSMRIRSGSQNIRKKWWRQVRIV 296

Query: 168 LAVDAAVCLILFVIWLIICNGISCVR 191
           LA+DAAVCL+LFVIWL IC GI C R
Sbjct: 297 LAIDAAVCLVLFVIWLSICKGIHCTR 322

[Close]

BLAST of Cp4.1LG01g26340 vs. TrEMBL
Match: A0A061E303_THECC (SNARE-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_007384 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-42
Identity = 92/146 (63.01%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 48  GKDWMAETPSSNN-GLSPSPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIE 107
           G DW AETPSS++ GLSPSPSN N Q++  +STKAPLLGK S+ EKKK KDHV+ +R IE
Sbjct: 133 GNDWKAETPSSDHAGLSPSPSNANAQLEAASSTKAPLLGKSSRQEKKKLKDHVVAVRDIE 192

Query: 108 MEEQRKSTDRGLKVDSVSLESGNQGGSGSSIPVEKDINP--LRRSSSSIRRRWWRHVRIA 167
           +EE RKSTDRG+KV+S +L+S NQ G+ SSI ++KD+    +R  S +IR++WWR VRI 
Sbjct: 193 LEEHRKSTDRGVKVNSTALDSNNQNGASSSISLQKDLGSMRIRSGSQNIRKKWWRQVRIV 252

Query: 168 LAVDAAVCLILFVIWLIICNGISCVR 191
           LA+DAAVCL+LFVIWL IC GI C R
Sbjct: 253 LAIDAAVCLVLFVIWLSICKGIHCTR 278

[Close]

BLAST of Cp4.1LG01g26340 vs. TrEMBL
Match: A0A067K5X0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14846 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.6e-42
Identity = 92/146 (63.01%), Postives = 113/146 (77.40%), Query Frame = 1


Query: 48  GKDWMAETPSSNNG-LSPSPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIE 107
           G DW A+T SS+N  LSPSPS+ NGQ+++L STKAPLLGK +K EKKK KDHVI MR IE
Sbjct: 133 GNDWNAKTSSSDNSFLSPSPSDANGQIEVLTSTKAPLLGKSNKQEKKKSKDHVIVMRDIE 192

Query: 108 MEEQRKSTDRGLKVDSVSLESGNQGGSGSSIPVEKDINP--LRRSSSSIRRRWWRHVRIA 167
           +EE RKS+DRG+KVDS SL+S NQ G  S I ++KD+    +R SS +IR++WWR VRI 
Sbjct: 193 LEEHRKSSDRGVKVDSTSLDSSNQVGVASPISLQKDLGSMRIRSSSQNIRKKWWRQVRIV 252

Query: 168 LAVDAAVCLILFVIWLIICNGISCVR 191
           LA+DAAVCLILF+IW+ IC G  C R
Sbjct: 253 LAIDAAVCLILFIIWVSICGGFGCTR 278

[Close]

BLAST of Cp4.1LG01g26340 vs. TAIR10
Match: AT4G10170.1 (AT4G10170.1 SNARE-like superfamily protein)

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-21
Identity = 67/134 (50.00%), Postives = 81/134 (60.45%), Query Frame = 1


Query: 57  SSNNGLSPSPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIEMEEQRKSTDR 116
           SSNN L  S  N+  Q +   STKAPLLG+LSK EKKKGKDHVI     E+EE RKS DR
Sbjct: 134 SSNNELKSS--NLGEQSEGSNSTKAPLLGRLSKQEKKKGKDHVI-----ELEEHRKSNDR 193

Query: 117 GLKVDSVSLESGNQGGSGSSIPVEKDINPLRRSSSSIRRRWWRHVRIALAVDAAVCLILF 176
           G   D       +  G+G+S+  E   +  R  + S   +W R V+I LA+DAA+CL LF
Sbjct: 194 GNITD-------DSAGAGTSLEKECVSSSGRSVTQSFEWKWRRLVQIVLAIDAAICLTLF 253

Query: 177 VIWLIICNGISCVR 191
            IWL IC GI C R
Sbjct: 254 GIWLAICRGIECTR 253

[Close]

BLAST of Cp4.1LG01g26340 vs. TAIR10
Match: AT1G33475.1 (AT1G33475.1 SNARE-like superfamily protein)

HSP 1 Score: 91.7 bits (226), Expect = 5.4e-19
Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = 1


Query: 65  SPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIEMEEQRKSTDRGLKVDSVS 124
           SPS    +    +++KAPLLG+ +K +KKKG+DH  ++RGIE+EE RKS DRG    +V+
Sbjct: 137 SPSIDGAEQSYASNSKAPLLGRSNKQDKKKGRDHAHSLRGIEIEEHRKSNDRG----NVT 196

Query: 125 LESGNQGGSGSSIPVEKDINPLRR----SSSSIRRRWWRHVRIALAVDAAVCLILFVIWL 184
             S     S + +P        RR     S SI R+W R V+I LA+D A+CL L  +WL
Sbjct: 197 ECSNASSESATYVP--------RRGRSGGSQSIERKWRRQVKIVLAIDIAICLTLLGVWL 254

Query: 185 IICNGISCVR 191
            IC+GI C R
Sbjct: 257 AICHGIECTR 254

[Close]

BLAST of Cp4.1LG01g26340 vs. NCBI nr
Match: gi|449441774|ref|XP_004138657.1| (PREDICTED: probable VAMP-like protein At1g33475 [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 1.6e-65
Identity = 137/180 (76.11%), Postives = 152/180 (84.44%), Query Frame = 1


Query: 12  SVSRGERMLYVYSNGDQEIENLADLCLKSAPPFHKCGKDWMAETPSSNNGLSPSPSNVNG 71
           S+S  E+++ V S     +EN++          H   KDWMAETPSSNNGLSPSPSNVNG
Sbjct: 108 SISLQEQLVPVISKLITSLENVS----------HN-SKDWMAETPSSNNGLSPSPSNVNG 167

Query: 72  QVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIEMEEQRKSTDRGLKVDSVSLESGNQG 131
           QVD+LASTKAPLLGK +KPEKKKGKDHVITMRGIEMEE RKSTDRGLK+DSVSLES NQG
Sbjct: 168 QVDVLASTKAPLLGKSNKPEKKKGKDHVITMRGIEMEEHRKSTDRGLKIDSVSLESSNQG 227

Query: 132 GSGSSIPVEKDINPLRRSSS-SIRRRWWRHVRIALAVDAAVCLILFVIWLIICNGISCVR 191
           GSGS+IPV+KD NPLRRS+S SIRRRWWRHVRIALAVDA VCLILFVIWLI+CNG+SCVR
Sbjct: 228 GSGSAIPVQKDSNPLRRSNSQSIRRRWWRHVRIALAVDAVVCLILFVIWLIVCNGVSCVR 276

[Close]

BLAST of Cp4.1LG01g26340 vs. NCBI nr
Match: gi|659081188|ref|XP_008441200.1| (PREDICTED: probable VAMP-like protein At1g33475 [Cucumis melo])

HSP 1 Score: 251.9 bits (642), Expect = 8.8e-64
Identity = 128/143 (89.51%), Postives = 135/143 (94.41%), Query Frame = 1


Query: 49  KDWMAETPSSNNGLSPSPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIEME 108
           KDWMAETPSSNNGLSPSPSNVNGQVD+LASTKAPLLGK +KPEKKKGKDHVITMRGIEME
Sbjct: 134 KDWMAETPSSNNGLSPSPSNVNGQVDVLASTKAPLLGKSNKPEKKKGKDHVITMRGIEME 193

Query: 109 EQRKSTDRGLKVDSVSLESGNQGGSGSSIPVEKDINPLRRSSS-SIRRRWWRHVRIALAV 168
           E RKSTDRGLK+DSVSLES NQGGSGSSIPV+KD NPLRRS+S S  RRWWRHVRIALAV
Sbjct: 194 EHRKSTDRGLKIDSVSLESSNQGGSGSSIPVQKDSNPLRRSNSQSYPRRWWRHVRIALAV 253

Query: 169 DAAVCLILFVIWLIICNGISCVR 191
           DA VCLILFVIWLI+CNG+SCVR
Sbjct: 254 DAVVCLILFVIWLIVCNGVSCVR 276

[Close]

BLAST of Cp4.1LG01g26340 vs. NCBI nr
Match: gi|1000959459|ref|XP_015576378.1| (PREDICTED: phytolongin Phyl1.1 isoform X2 [Ricinus communis])

HSP 1 Score: 179.9 bits (455), Expect = 4.3e-42
Identity = 93/146 (63.70%), Postives = 112/146 (76.71%), Query Frame = 1


Query: 48  GKDWMAETPSSNN-GLSPSPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIE 107
           G DW  ET SS N GLSPSPS+ NG ++I  STKAPLLGK +K EKKK KDHVI MR IE
Sbjct: 133 GNDWKTETSSSENMGLSPSPSDANGLIEIHTSTKAPLLGKSNKQEKKKSKDHVIVMRDIE 192

Query: 108 MEEQRKSTDRGLKVDSVSLESGNQGGSGSSIPVEKDINP--LRRSSSSIRRRWWRHVRIA 167
           +EE RKSTDRG++VDS SL+S NQGG  S++ ++KD+    +R S+ SIR++WWR VRI 
Sbjct: 193 LEEHRKSTDRGVRVDSTSLDSNNQGGVASAMSLQKDMGSMRIRSSAQSIRKKWWRQVRIV 252

Query: 168 LAVDAAVCLILFVIWLIICNGISCVR 191
           LA+DAAVCLILFVIW+ IC G  C R
Sbjct: 253 LAIDAAVCLILFVIWMSICGGFGCTR 278

[Close]

BLAST of Cp4.1LG01g26340 vs. NCBI nr
Match: gi|255561480|ref|XP_002521750.1| (PREDICTED: phytolongin Phyl1.1 isoform X1 [Ricinus communis])

HSP 1 Score: 179.9 bits (455), Expect = 4.3e-42
Identity = 93/146 (63.70%), Postives = 112/146 (76.71%), Query Frame = 1


Query: 48  GKDWMAETPSSNN-GLSPSPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIE 107
           G DW  ET SS N GLSPSPS+ NG ++I  STKAPLLGK +K EKKK KDHVI MR IE
Sbjct: 142 GNDWKTETSSSENMGLSPSPSDANGLIEIHTSTKAPLLGKSNKQEKKKSKDHVIVMRDIE 201

Query: 108 MEEQRKSTDRGLKVDSVSLESGNQGGSGSSIPVEKDINP--LRRSSSSIRRRWWRHVRIA 167
           +EE RKSTDRG++VDS SL+S NQGG  S++ ++KD+    +R S+ SIR++WWR VRI 
Sbjct: 202 LEEHRKSTDRGVRVDSTSLDSNNQGGVASAMSLQKDMGSMRIRSSAQSIRKKWWRQVRIV 261

Query: 168 LAVDAAVCLILFVIWLIICNGISCVR 191
           LA+DAAVCLILFVIW+ IC G  C R
Sbjct: 262 LAIDAAVCLILFVIWMSICGGFGCTR 287

[Close]

BLAST of Cp4.1LG01g26340 vs. NCBI nr
Match: gi|590688108|ref|XP_007042854.1| (SNARE-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 179.9 bits (455), Expect = 4.3e-42
Identity = 92/146 (63.01%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 48  GKDWMAETPSSNN-GLSPSPSNVNGQVDILASTKAPLLGKLSKPEKKKGKDHVITMRGIE 107
           G DW AETPSS++ GLSPSPSN N Q++  +STKAPLLGK S+ EKKK KDHV+ +R IE
Sbjct: 177 GNDWKAETPSSDHAGLSPSPSNANAQLEAASSTKAPLLGKSSRQEKKKLKDHVVAVRDIE 236

Query: 108 MEEQRKSTDRGLKVDSVSLESGNQGGSGSSIPVEKDINP--LRRSSSSIRRRWWRHVRIA 167
           +EE RKSTDRG+KV+S +L+S NQ G+ SSI ++KD+    +R  S +IR++WWR VRI 
Sbjct: 237 LEEHRKSTDRGVKVNSTALDSNNQNGASSSISLQKDLGSMRIRSGSQNIRKKWWRQVRIV 296

Query: 168 LAVDAAVCLILFVIWLIICNGISCVR 191
           LA+DAAVCL+LFVIWL IC GI C R
Sbjct: 297 LAIDAAVCLVLFVIWLSICKGIHCTR 322

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g26340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PHL11_ARATH	3.5e-20	50.00	Phytolongin Phyl1.1 OS=Arabidopsis thaliana GN=PHYL1.1 PE=2 SV=1	[more]
PHL12_ARATH	9.6e-18	43.85	Phytolongin Phyl1.2 OS=Arabidopsis thaliana GN=PHYL1.2 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g26340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMR1_CUCSA	1.1e-65	76.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401480 PE=3 SV=1	[more]
B9S6Y1_RICCO	3.0e-42	63.70	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1329410 PE=3 SV=1	[more]
A0A061E180_THECC	3.0e-42	63.01	SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_007384 PE=3 S...	[more]
A0A061E303_THECC	3.0e-42	63.01	SNARE-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_007384 PE=3 S...	[more]
A0A067K5X0_JATCU	6.6e-42	63.01	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14846 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g26340 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10170.1	2.0e-21	50.00	SNARE-like superfamily protein	[more]
AT1G33475.1	5.4e-19	43.85	SNARE-like superfamily protein	[more]

BLAST of Cp4.1LG01g26340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441774\|ref\|XP_004138657.1\|	1.6e-65	76.11	PREDICTED: probable VAMP-like protein At1g33475 [Cucumis sativus]	[more]
gi\|659081188\|ref\|XP_008441200.1\|	8.8e-64	89.51	PREDICTED: probable VAMP-like protein At1g33475 [Cucumis melo]	[more]
gi\|1000959459\|ref\|XP_015576378.1\|	4.3e-42	63.70	PREDICTED: phytolongin Phyl1.1 isoform X2 [Ricinus communis]	[more]
gi\|255561480\|ref\|XP_002521750.1\|	4.3e-42	63.70	PREDICTED: phytolongin Phyl1.1 isoform X1 [Ricinus communis]	[more]
gi\|590688108\|ref\|XP_007042854.1\|	4.3e-42	63.01	SNARE-like superfamily protein isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006887	exocytosis
biological_process	GO:0006906	vesicle fusion
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031201	SNARE complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g26340.1	Cp4.1LG01g26340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21136	SNARE PROTEINS	coord: 1..190 score: 6.9
None	No IPR available	PANTHER	PTHR21136:SF88	SUBFAMILY NOT NAMED	coord: 1..190 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g26340	Cucsa.088460	Cucumber (Gy14) v1	cgycpeB0164
Cp4.1LG01g26340	CmaCh04G030150	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g26340	CmoCh04G031370	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g26340	Cla011920	Watermelon (97103) v1	cpewmB454
Cp4.1LG01g26340	Csa2G401480	Cucumber (Chinese Long) v2	cpecuB386
Cp4.1LG01g26340	MELO3C008104	Melon (DHL92) v3.5.1	cpemeB400
Cp4.1LG01g26340	ClCG11G008270	Watermelon (Charleston Gray)	cpewcgB356
Cp4.1LG01g26340	CSPI02G24820	Wild cucumber (PI 183967)	cpecpiB385
Cp4.1LG01g26340	MELO3C008104.2	Melon (DHL92) v3.6.1	cpemedB465
Cp4.1LG01g26340	CsaV3_2G033340	Cucumber (Chinese Long) v3	cpecucB0482
Cp4.1LG01g26340	Bhi04G002066	Wax gourd	cpewgoB0525
Cp4.1LG01g26340	CsGy2G024560	Cucumber (Gy14) v2	cgybcpeB214
Cp4.1LG01g26340	Carg06088	Silver-seed gourd	carcpeB0034

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g26340	Silver-seed gourd	carcpeB1509
Cp4.1LG01g26340	Cucurbita pepo (Zucchini)	cpecpeB199
Cp4.1LG01g26340	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g26340	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g26340	Bottle gourd (USVL1VR-Ls)	cpelsiB339