Cp4.1LG01g26320 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g26320
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	WD40 repeat-containing protein SMU1
Location	Cp4.1LG01 : 21279786 .. 21286273 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTAATGATGTAGCACGTGTCATTACAGCATCTAGTGATTGCACGGTCAAGGTTAATCGTTATTTTGGTTATGTTCTATGTCTAGTTGACTGTGTAATGTACTTGTTCAAAGTGACACGGTAAATTTGTTGTTCTTTGTAGGTATGGGATGTGAAGACAACCGATTGTCTGCATACATTCAAACCCCCGCCTCCATTAAGGGTTTGTGAAAGTGCATTAATATAGATGAGAAAAACTAACTCTGTTGAACTTCAAGTTCCCTTAGTTGCTCCCATTCCTCACCATTGTTCTTTTCAATTTTTGGAATTTTAGGGAGGAGATGCCTCAGTGAACTCGATTCATTTGTTCCCCAAAAATGCAGATCATATTGTTGTTTGTAACAAGACATCATCAATATACATTATGACATTGCAAGGGCAGGTAATTTTTGTTAATTGCTAAGCTGGGAGTGAGATCATTTTCTTCTCTAGATCGTCTTTCTTGATAAGAGACTAGTTTATTGATAAATAAAACTCACATAGCACTGGGCTGTCAAGCCAATTGGTAGAAAAAAGTGCCTCTCAAAGCAAGACCATGGTGAGGGTTGGGTGACAAGCACTGCATCACCATCCCTACCCACATCTTGCAAAAATAATGTTCCTCTTTAAATTGTCATGGTTTACAAATCAATCATCCTCTTGATATGTCCACGTGGAAATGTCTTCAAGTACCTAATGATTAGGTGTGGCTTTGAAGTTAACCGGTGCAGCTATTGTTGGATTGTTCTCAATAATTTGAACATATCTTTTCTTTGCTCTTGCGTCTCTACGCCTGTATGCAAACAAATGTTTAAAGAATCAGCTTGCATGGCTTTGCAACAGAAGCACTTTTTGGTCTTTTTTAACAAATTTCTTTGACGTGAAATGTGTCTACATGGGTTCAGATGAAAGTTTTGCCAAACTCAAAAGGGGAGGGATTTGAAATAAAAATCTCGTTCCTACAAATTTGTTAGACCAAATATGAGAGTATTTCATATTATCTTATATATTAGAGCCAAATATATATAGGCCTATATGGAAGCCCAAAACTAATAGTAGTACAATTACAATCAAGGACAAAAGACTTTGTTTTTTTGAACAAGAAACACCTATGAAAAGGAAGGAAAAAAAGGATACAAGTCCCCATGGGAATTAAAAAAGATAACAAAAGAAGAAATAAACCTAAAAATACAAGAGGATGAAACAATAAAAAACAACTAGCGAAGCAAACAAAAAACCACAAAAATCTACAATAAAGAGCTCCAACTGTAGCTAAAAATGCAGAAACTTCTTTCGGAGAAAAGTATAACAAAGACCCAAGGGCTTGAAACTCAGAAAAGCAGCTTGAGAAAATGAAGCCACGAAAAGATGTTTTTGAAAACGTTCCAAACGCCTCCAAAATGCCAAAGAAGAATGTTCAATGAAGATCTCTCAAGTAACCACACTCTACGCTCTAGATCATCTTTAAGAAGAAAATCCAGAACACAATTGAATCCAACCATAATAAATTGTTAATCAAACATAACTACTTATTCTGGAAGGCACATTGGACCGAATTTTGTTTTTTAAAGCCAAATGCTTCGAAGCTTCCCATAACTTCTAAAAAGCCATAAAAAAAAATCTTCAATGAGGGATTATACAGAAAGAACAACTGAACTGTTATTTGAGGTGAATGAGATGGAATTTCATGTGTCTGAAGACCGCAAATCTTAATAAGAGATGAAAAACATTTAGGAATCAAGAGGTGGACTCCACTGGAAATTCTCTTTGACTTGGTCATCCACAAACTTTAAAGATGGTACAACATCTTCTTTGGGATAAATGAGAGCCAAGGATTGTTTAAGATTATCATTCTCACGATGGATTTCCTGATCAATTTTAATTCCTCACTACTTTTATCATTAGAGTCAATAAATAATGAAGAAGATGATTGAGCATTTGAACATTTAGGGCTGACGATGGAAGGTTTCAGCGACGCATCTAGCCTACATGGTGATTTTTCGGCCAATGGACTGTTTTCTTGGCTGGGCAGTAATGAAAAATTACTTCAGTAACAAATGATAGATTCTGCGAGCAACGACGGCAGATTCTGACGGCTTAGTGATACACAATAGTTTCCCATGATATTATGAGACCCCAGGAGAAATTCATATTATTCTATATAGTATAGCCAAATGTGTATAGGTATTCATGGAAGCCCTAAACTAATAATAGTAAAAATACAATGAAGGACAAAAGACTAAAAAGCCTTTAAACTATAACACAAATTATTGTGATTCTTTTGACACACTTCAAAATTTACTGCAGAATAATTTAACTAATACAATTACTATCTTGGCTTACTAATCATCTCTTGGTTCCATTTAGGTTGTTAAGAGCTTCTCATCTGGTAAAAGAGAAGGGGGAGATTTTGTTGCAGCTTGCGTATCGCCAAAAGGTGAATGGATATACTGCATTGGTGAAGACAGGTCAGTTTTCTTATGTTATGGATACATAAAAATAAAGTCATCCAGCTGTGTTGTGTCCTCTATTTGTCATATGTGGTGAAGTTTCCTTCTCTCTTTTTTAGACGTGAGTAGTTTATACGCACTTTACAATGTTGCAAATCCTTGGTAGTTGGTACCCTTTTCACGGAAGTAAGATTGTCTGACCTTACCAAATCATAATTTCTTAGGTCTATTGGTATAACTATATATCGATCCAAGCGTCAGTACCCTATATTATATGATCTTGGAGTGGCCCTTTTTCAATTAATGATCCTTTAATATCTGTTGCCAAGGCAATATGCTGTAACATATTTGAGTGGTCTCCACTCCTGGGTTTTTTAATTAATAAATTTATGTATATTTATAGTTATTAATATTATTATTTAGGAAGCACGGATACTTTGAATTTGACAAAGTGTTTGTATTGGACACGTGTTAGACATAGATATGTCCATCAGTCGCAGAATGATGGCGTTTGCAGGATCGGGGGAGGGAGGGAAAATGAAAGAAGGGAGAAGGACTGTTTAAGGGTTAGGTTTTTATTATTATTATTTTTTTCAAATTACAATAAATTTTATTTTGTAGGCTTTTTATGGGTACTTTGTGGCTTGAGCAGTTGTCTTGATTGGGTTTTGACTCATATGACTTATTGGGTTTTATGTAAATTAAAATTTTAGACTAGATTCAATGGGAAATTAAATTTTCATTCACGTTTTTTTAATTTAATAATTCTTAATAGTGAGTGAAAAAAAAAAACTTAAGGTATTTTGGATTTTATCTTTTAATATTATTTAATAAATAAAAATAATGTGTCCTCGATTTGTCTGTGCTCTAAATTTTTAGAAATTTTTTTATTGCCGTGTTCGCGTGTATCCATGTCATGTCTCTGTGTCCTTGTTCTTTAGTTAACTATTATTATTAAGATATGATCTTGAATTTGTCTACCATCTGCAGGAATATGTATTGCTTCAGCCACCAATCCGGTAAACTGGAGCATCTCATGAAGGTATGTGTTTTGTACTCCAATTACTTGGATTTCTCTCGGTCTATTCTCAGTTGCTATAAGAATATCTTTAGTAATTTAAACAACTTGTGTCAAGAACACCGAAAGATTAGAACGCCACATTGCTTATCAGAATGGCATTTTTATTTGGCTGTAGTATTATATTTAAATATGGTGATGGAATCAGAGTTGGCTCGTCAATGTATAAATTATAATTGATTAGGTTACTATACTTTAGGTTGGTCTTTCTATCAATGATTGGTCTGATAAAATGGTTGGAACTGCCCCATTCTTGGTCTGTCATGAACCCCAAATTAAATTAGTGATTTAAGGGCATATAAGTTAGGCTAAATTAATAATATTACTCTTAAATTGTACATTGTATCAAAATTATCCTTAAAACTTTCAAAAGTTCCAATAATACTTTTAACTTTCAAAAAAATCTAAAAAATACTCTTACCGTTAGTTTTGAATGGAAACCGTTAGTACTTTATTTCAAAAATACCCTTAAACTTTTAATAGTGTTTCAAGATTATGTTTTGTCTCTTCCTCAGATAAAGACAATCAAATAATTCCCAATACCCATAAACTTTTGAAAGTTCATGAGTATTTTTGAAACGTGGTACTAAAGGTATTTTTTAATTTTTCAGAAAAAATTCCAAAGGTGTTTTGAAGTTTTTAAAAAGTTCAGTAGTATTTTTGAAGTTTTTAAAAAAGTTTAAGAGTACTAATGAAACTTTTGAAAACCCAAGAGTGTTTTTTAAACATTTTTAAAAGTTAAAAGGGTATTTTTGAAAGTTAAGGAGTATTTTTAAAACAAACTATGACGGTTCCATCCAAAACTAACGGTAAGGGTATTTTTTTTAACTTTTTTCTTTTAAGTTAAATTTTTTTATTTATTTTTACTTTTTAATTTTTTTTTTTTTTTTTATTGTTTAAAGGTATTATTTTTTTATCAATAATTTTTTGTTTGTCTATTTAGATATTTTTGTCTGTTATAGACTCACCCATTTATGCCTATTTGTCTTTCAGCTACAGACATAATCACTAATTCCTGTAACAAGAAAAAGATACATATCACCAATCGACGTAAAAACAGTCTATCAATGCCTCTATTGAGTATTGATAAATGTCTATTAGTGACTCTATAAAAATGATTATCTGAAATGTGTGGGAGTTAAAGAAACGTATTTAAAAAAAGTGAGAAAACTTAAAAAGTTTTCATATTTGCAAAATTATTACTCTGTTGCTATATTTGGAAACATGAGAATGTGAATTTACACCCATTAATTTTTTCCTAGAAAAAAGTTCCAAGTCTTTGTATCCTGTAAAATAGTTAGCCATAGCAACCTAAAGAGAGCATCAAGATGCCAAGAAATTGGTCTGCAACAGTAATCTTCCTCTATCTAGAATCAGGAAATGCAAAAAGACCTTTATCATAGCCCAACAACCTGCACTTGGGTTTTTAAGACCTGCCAACTCGAGAATCTCGACAAAACTTAAGGTGAAAAAGTGGCAATAACATATAGTATAGTTTTGAGCCTCCAACGCCTCTCTTCATAAAACATATGAATGAGAACATGGAAAGCCAAATTGGAATGCCTCTAGGTCTAGGTATAGCCTATTGTGTTAGTTTGTCGCCATCAAAGAACTCAACTGTAGGAAAATATATGAATGGTTCTTTGAATGGAATGTGAATGAATGATTTGAAGTTGTAGGATGTAATTTTTAGTAGGAAACCCATAACTTTCTCCCTCCTTGGTACATTTTCTAAACAGGACTTTCCTTTTTCTTGGGCTTGTAATTTGATCATTGGTTTGAGTTGTTACATATTCTATTGCATGATTATTGGATGATAGATTGTTTAAACTCAAATTTGTTTGTGGTAGGTTCATGAGAAGGACGTGATAGGTGTGAATCATCATCCTCATAGAAATCTCGTTGCTACTTATAGTGAAGACAACACAATGAAACTATGGAAGCCTTGACTATTTTACTTGTGCTATTATTTTAAGTTATAATTTTATTCATTTACCTCATTGGCAACTTACTTTTCTTGATAAACTGTGGCAGTATTTTGAAAGGATGGTAATCCATGTATGAAATCTTCTGATGGTTTTGCCTGAGCATGCCCGTCTGTTGCAGAGTATCAAGATAAAATGGTAATTCCGATTTGTTAGAGAGCACAGTTAGCCTGATAAATCTATATGAGCTTCTTCCTACCTGGTCATGAGGAAGCTCTAATCTTCCTTAGGAGTTGAATCCTTAAGATCAAATGGTTTTCATTGTCATGTTGTAGCTAATCACTAGGTGGCGTCTCTATTTAAAGCTGGGATTTGAATGAGGAACAAATATTGTCAGAAGTGGACAATTGTTACTTGAGTCAATAGTGGGGCATTATTTAAATTACAAGTGCAGTCTTCTCCTCGCGTTGCCCACTACCTGACTTCTAAATTGCTGGCTAGCAAGCCGTAATTGGTCTTCCTGCTTGGTCACTGCCTCTATATCACTGAATATGGTAATTAACATGTTGCTCCTACACCAATCCTACTTNTTTCATTACAAGTGCAGTCTTCTCCTCGCGTTGCCCACTACCTGACTTTTAAATTGCTGGCTAGCAAGCCGTAATTGGTCTTCCTGCTTGGTCACGGCCTCTATATCACAGAATATGGTAATTAACATGTTGCTCCTACACCAATCCTACTTTATTTTTTCCCCTCAAAGTGGACTCGTTGAACAGCATTTTATCGGCAGGTTGAATTATCTGACGAGTGTAAGGTCCGTTTTATTTTCTTCTTCCCTTCAGTCTGACGGAGTTTTGTAGTTTGATTCCCCAGTACTTAATGTTCTATTTGCTTTTTTATTTTTAATAGAACTCCAGGAGTTGGATGAACCAACAGCCTGGAGGATGAATGGACAGCCCGAGAACAATTTAGTATGAGTTGAAGTAAAAATAGTTTTTGTTTGTGGTATTTGGAACGT

mRNA sequence

ACTAATGATGTAGCACGTGTCATTACAGCATCTAGTGATTGCACGGTCAAGGTATGGGATGTGAAGACAACCGATTGTCTGCATACATTCAAACCCCCGCCTCCATTAAGGGGAGGAGATGCCTCAGTGAACTCGATTCATTTGTTCCCCAAAAATGCAGATCATATTGTTGTTTGTAACAAGACATCATCAATATACATTATGACATTGCAAGGGCAGGTTGTTAAGAGCTTCTCATCTGGTAAAAGAGAAGGGGGAGATTTTGTTGCAGCTTGCGTATCGCCAAAAGGTGAATGGATATACTGCATTGGTGAAGACAGCCACCAATCCGGTAAACTGGAGCATCTCATGAAGGTTCATGAGAAGGACGTGATAGGTGTGAATCATCATCCTCATAGAAATCTCGTTGCTACTTATAGTGAAGACAACACAATGAAACTATGGAAGCCTTGACTATTTTACTTGTGCTATTATTTTAAGTTATAATTTTATTCATTTACCTCATTGGCAACTTACTTTTCTTGATAAACTGTGGCAGTATTTTGAAAGGATGGTAATCCATGTATGAAATCTTCTGATGGTTTTGCCTGAGCATGCCCGTCTGTTGCAGAGTATCAAGATAAAATGCTAATCACTAGGTGGCGTCTCTATTTAAAGCTGGGATTTGAATGAGGAACAAATATTGTCAGAAGTGGACAATTGTTACTTGAGTCAATAGTGGGGCATTATTTAAATTACAAGTGCAGTCTTCTCCTCGCGTTGCCCACTACCTGACTTCTAAATTGCTGGCTAGCAAGCCGTAATTGGTCTTCCTGCTTGGTCACTGCCTCTATATCACTGAATATGGTAATTAACATGTTGCTCCTACACCAATCCTACTTNTTTCATTACAAGTGCAGTCTTCTCCTCGCGTTGCCCACTACCTGACTTTTAAATTGCTGGCTAGCAAGCCGTAATTGGTCTTCCTGCTTGGTCACGGCCTCTATATCACAGAATATGGTAATTAACATGTTGCTCCTACACCAATCCTACTTTATTTTTTCCCCTCAAAGTGGACTCGTTGAACAGCATTTTATCGGCAGGTTGAATTATCTGACGAGTGTAAGGTCCGTTTTATTTTCTTCTTCCCTTCAGTCTGACGGAGTTTTGTAGTTTGATTCCCCAGTACTTAATGTTCTATTTGCTTTTTTATTTTTAATAGAACTCCAGGAGTTGGATGAACCAACAGCCTGGAGGATGAATGGACAGCCCGAGAACAATTTAGTATGAGTTGAAGTAAAAATAGTTTTTGTTTGTGGTATTTGGAACGT

Coding sequence (CDS)

ACTAATGATGTAGCACGTGTCATTACAGCATCTAGTGATTGCACGGTCAAGGTATGGGATGTGAAGACAACCGATTGTCTGCATACATTCAAACCCCCGCCTCCATTAAGGGGAGGAGATGCCTCAGTGAACTCGATTCATTTGTTCCCCAAAAATGCAGATCATATTGTTGTTTGTAACAAGACATCATCAATATACATTATGACATTGCAAGGGCAGGTTGTTAAGAGCTTCTCATCTGGTAAAAGAGAAGGGGGAGATTTTGTTGCAGCTTGCGTATCGCCAAAAGGTGAATGGATATACTGCATTGGTGAAGACAGCCACCAATCCGGTAAACTGGAGCATCTCATGAAGGTTCATGAGAAGGACGTGATAGGTGTGAATCATCATCCTCATAGAAATCTCGTTGCTACTTATAGTGAAGACAACACAATGAAACTATGGAAGCCTTGA

Protein sequence

TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGEDSHQSGKLEHLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP

Homology

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BLAST of Cp4.1LG01g26320 vs. Swiss-Prot
Match: SMU1_ARATH (Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana GN=SMU1 PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.1e-72
Identity = 129/156 (82.69%), Postives = 138/156 (88.46%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           T+D +R+ITASSDCTVKVWD KTTDCL TFKPPPPLRG DASVNSIHLFPKN +HIVVCN
Sbjct: 356 TSDGSRIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCN 415

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           KTSSIYIMTLQGQVVKSFSSG REGGDFVAACVS KG+WIYCIGED      ++QSG LE
Sbjct: 416 KTSSIYIMTLQGQVVKSFSSGNREGGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGGLE 475

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
           H M VHEKDVIG+ HHPHRNL+ATYSED TMKLWKP
Sbjct: 476 HFMMVHEKDVIGITHHPHRNLLATYSEDCTMKLWKP 511

[Close]

BLAST of Cp4.1LG01g26320 vs. Swiss-Prot
Match: SMU1_CHICK (WD40 repeat-containing protein SMU1 OS=Gallus gallus GN=SMU1 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.8e-51
Identity = 94/156 (60.26%), Postives = 119/156 (76.28%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           T D   +I+ASSD TVKVW+VKTT+C +TFK      G D +VNS+ L PKN +H VVCN
Sbjct: 358 TQDGHYIISASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCN 417

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           +++++ IM +QGQ+V+SFSSGKREGGDFV   +SP+GEWIYC+GED      S  +GKLE
Sbjct: 418 RSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLE 477

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
             + VHEKDVIG+ HHPH+NL+ATYSED  +KLWKP
Sbjct: 478 RTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513

[Close]

BLAST of Cp4.1LG01g26320 vs. Swiss-Prot
Match: SMU1_BOVIN (WD40 repeat-containing protein SMU1 OS=Bos taurus GN=SMU1 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.2e-51
Identity = 92/156 (58.97%), Postives = 119/156 (76.28%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           T D   +I+ASSD TVK+W++KTT+C +TFK      G D +VNS+ L PKN +H VVCN
Sbjct: 358 TQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCN 417

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           +++++ IM +QGQ+V+SFSSGKREGGDFV   +SP+GEWIYC+GED      S  +GKLE
Sbjct: 418 RSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLE 477

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
             + VHEKDVIG+ HHPH+NL+ATYSED  +KLWKP
Sbjct: 478 RTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513

[Close]

BLAST of Cp4.1LG01g26320 vs. Swiss-Prot
Match: SMU1_CRIGR (WD40 repeat-containing protein SMU1 OS=Cricetulus griseus GN=SMU1 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.2e-51
Identity = 92/156 (58.97%), Postives = 119/156 (76.28%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           T D   +I+ASSD TVK+W++KTT+C +TFK      G D +VNS+ L PKN +H VVCN
Sbjct: 358 TQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCN 417

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           +++++ IM +QGQ+V+SFSSGKREGGDFV   +SP+GEWIYC+GED      S  +GKLE
Sbjct: 418 RSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLE 477

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
             + VHEKDVIG+ HHPH+NL+ATYSED  +KLWKP
Sbjct: 478 RTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513

[Close]

BLAST of Cp4.1LG01g26320 vs. Swiss-Prot
Match: SMU1_RAT (WD40 repeat-containing protein SMU1 OS=Rattus norvegicus GN=Smu1 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.2e-51
Identity = 92/156 (58.97%), Postives = 119/156 (76.28%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           T D   +I+ASSD TVK+W++KTT+C +TFK      G D +VNS+ L PKN +H VVCN
Sbjct: 358 TQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCN 417

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           +++++ IM +QGQ+V+SFSSGKREGGDFV   +SP+GEWIYC+GED      S  +GKLE
Sbjct: 418 RSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLE 477

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
             + VHEKDVIG+ HHPH+NL+ATYSED  +KLWKP
Sbjct: 478 RTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP 513

[Close]

BLAST of Cp4.1LG01g26320 vs. TrEMBL
Match: W9RK20_9ROSA (WD40 repeat-containing protein SMU1 OS=Morus notabilis GN=L484_014295 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.2e-77
Identity = 141/156 (90.38%), Postives = 145/156 (92.95%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           TND ARVITASSDCTVKVWDVKTTDCL TFKPPPPLRGGDASVNS+HLFPKN DHIVVCN
Sbjct: 394 TNDGARVITASSDCTVKVWDVKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNTDHIVVCN 453

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYC+GED      S+QSGKLE
Sbjct: 454 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNIYCFSYQSGKLE 513

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
           HLMKVH+KDVIGV HHPHRNLVATYSED TMKLWKP
Sbjct: 514 HLMKVHDKDVIGVTHHPHRNLVATYSEDCTMKLWKP 549

[Close]

BLAST of Cp4.1LG01g26320 vs. TrEMBL
Match: I1K4C1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G170500 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 3.8e-77
Identity = 135/150 (90.00%), Postives = 144/150 (96.00%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           TND +RVITASSDCT+KVWDVKTTDC+ TFKPPPPLRGGDASVNS+H+FPKN DHIVVCN
Sbjct: 358 TNDGSRVITASSDCTIKVWDVKTTDCIQTFKPPPPLRGGDASVNSVHIFPKNTDHIVVCN 417

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGEDSHQSGKLEHLMKVH 120
           KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYC+GEDS+QSGKLEHLMKVH
Sbjct: 418 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDSYQSGKLEHLMKVH 477

Query: 121 EKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
           EK+VIGV HHPHRNLVAT+SED TMK WKP
Sbjct: 478 EKEVIGVTHHPHRNLVATFSEDCTMKSWKP 507

[Close]

BLAST of Cp4.1LG01g26320 vs. TrEMBL
Match: D7SHM1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g08930 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.9e-76
Identity = 136/156 (87.18%), Postives = 144/156 (92.31%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           TND  RV+TASSDCTVKVWDVKTTDCL TFKPPPPLRGGDASVN +HLFPKN DHI+VCN
Sbjct: 359 TNDGGRVVTASSDCTVKVWDVKTTDCLQTFKPPPPLRGGDASVNGVHLFPKNTDHIIVCN 418

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           +TSSIY+MTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYC+GED      S+QSGKLE
Sbjct: 419 RTSSIYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNIYCFSYQSGKLE 478

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
           HLMKVHEKDVIGV HHPHRNLVATYSED+TMKLWKP
Sbjct: 479 HLMKVHEKDVIGVTHHPHRNLVATYSEDSTMKLWKP 514

[Close]

BLAST of Cp4.1LG01g26320 vs. TrEMBL
Match: A0A068VDP6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00013408001 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.5e-76
Identity = 137/156 (87.82%), Postives = 144/156 (92.31%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           TND +R+ITASSDCTVKVWDVKT DCL TFKPPPPLRGGDAS+NS+HLFPKNADHIVVCN
Sbjct: 359 TNDGSRIITASSDCTVKVWDVKTADCLQTFKPPPPLRGGDASINSVHLFPKNADHIVVCN 418

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYC+GED      S+QSG LE
Sbjct: 419 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDKNLYCFSYQSGNLE 478

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
           HLMKVHEKDVIG+ HHPHRNLVATYSED TMKLWKP
Sbjct: 479 HLMKVHEKDVIGITHHPHRNLVATYSEDCTMKLWKP 514

[Close]

BLAST of Cp4.1LG01g26320 vs. TrEMBL
Match: A0A067G502_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010324mg PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 3.2e-76
Identity = 137/156 (87.82%), Postives = 144/156 (92.31%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           TND +RV+TASSDCTVKVWD+K+TDCL TFKPPPPLRGGDASVNS+HLFPKN DHIVVCN
Sbjct: 357 TNDGSRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCN 416

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYC+GED      SHQSGKLE
Sbjct: 417 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLE 476

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
           HLMKVHEKDVIGV HHPHRNL+ATY ED TMKLWKP
Sbjct: 477 HLMKVHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP 512

[Close]

BLAST of Cp4.1LG01g26320 vs. TAIR10
Match: AT1G73720.1 (AT1G73720.1 transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 272.3 bits (695), Expect = 1.8e-73
Identity = 129/156 (82.69%), Postives = 138/156 (88.46%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           T+D +R+ITASSDCTVKVWD KTTDCL TFKPPPPLRG DASVNSIHLFPKN +HIVVCN
Sbjct: 356 TSDGSRIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCN 415

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           KTSSIYIMTLQGQVVKSFSSG REGGDFVAACVS KG+WIYCIGED      ++QSG LE
Sbjct: 416 KTSSIYIMTLQGQVVKSFSSGNREGGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGGLE 475

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
           H M VHEKDVIG+ HHPHRNL+ATYSED TMKLWKP
Sbjct: 476 HFMMVHEKDVIGITHHPHRNLLATYSEDCTMKLWKP 511

[Close]

BLAST of Cp4.1LG01g26320 vs. TAIR10
Match: AT5G08390.1 (AT5G08390.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 51.2 bits (121), Expect = 6.4e-07
Identity = 38/148 (25.68%), Postives = 67/148 (45.27%), Query Frame = 1


Query: 7   VITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCNKTSSIY 66
           V   ++  T+K+WD++    + T      L G  ++  S++  P   +     +  +++ 
Sbjct: 74  VAAGAASGTIKLWDLEEAKVVRT------LTGHRSNCVSVNFHPFG-EFFASGSLDTNLK 133

Query: 67  IMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGEDSH------QSGKLEHLMKVH 126
           I  ++ +       G   G + +    +P G WI   GED+        +GKL H  K H
Sbjct: 134 IWDIRKKGCIHTYKGHTRGVNVLR--FTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 193

Query: 127 EKDVIGVNHHPHRNLVATYSEDNTMKLW 149
           E  +  ++ HPH  L+AT S D T+K W
Sbjct: 194 EGKIQSLDFHPHEFLLATGSADKTVKFW 212

[Close]

BLAST of Cp4.1LG01g26320 vs. TAIR10
Match: AT2G46280.1 (AT2G46280.1 TGF-beta receptor interacting protein 1)

HSP 1 Score: 48.1 bits (113), Expect = 5.4e-06
Identity = 48/166 (28.92%), Postives = 72/166 (43.37%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           + D +R+IT S+D T K+WDVK+   L TFK   P R  D +V    L     DH V  +
Sbjct: 61  SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGD-RLAVITTDHFV--D 120

Query: 61  KTSSIYIMTL---------QGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED----- 120
           +T++I++  +         +  +V     GK+       A   P  + I   GED     
Sbjct: 121 RTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKR---INRAVWGPLNQTIVSGGEDKVIRI 180

Query: 121 -SHQSGKLEHLMKV---HEKDVIGVNHHPHRNLVATYSEDNTMKLW 149
              ++GKL         H+KD+  +      +   T S D T KLW
Sbjct: 181 WDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220

[Close]

BLAST of Cp4.1LG01g26320 vs. TAIR10
Match: AT5G23430.1 (AT5G23430.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 47.8 bits (112), Expect = 7.0e-06
Identity = 39/156 (25.00%), Postives = 69/156 (44.23%), Query Frame = 1


Query: 1   TNDVARVITASSDC--TVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVV 60
           T D + V+ A+     T+K+WD++    + T      L G  ++  S+   P   +    
Sbjct: 66  TFDASEVLVAAGAASGTIKLWDLEEAKIVRT------LTGHRSNCISVDFHPFG-EFFAS 125

Query: 61  CNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGEDSH------QSGK 120
            +  +++ I  ++ +       G   G + +    +P G W+   GED+        +GK
Sbjct: 126 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLR--FTPDGRWVVSGGEDNIVKVWDLTAGK 185

Query: 121 LEHLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLW 149
           L    K HE  +  ++ HPH  L+AT S D T+K W
Sbjct: 186 LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFW 212

[Close]

BLAST of Cp4.1LG01g26320 vs. NCBI nr
Match: gi|449441804|ref|XP_004138672.1| (PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 9.1e-80
Identity = 144/156 (92.31%), Postives = 149/156 (95.51%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           TND ARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNS+H+FPKNADHIVVCN
Sbjct: 358 TNDGARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSVHIFPKNADHIVVCN 417

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           KTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC+SPKGEWIYCIGED      SHQSGKLE
Sbjct: 418 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACLSPKGEWIYCIGEDRNMYCFSHQSGKLE 477

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
           HLMKVHEKDVIGV+HHPHRNLVATYSED+TMKLWKP
Sbjct: 478 HLMKVHEKDVIGVSHHPHRNLVATYSEDSTMKLWKP 513

[Close]

BLAST of Cp4.1LG01g26320 vs. NCBI nr
Match: gi|659081098|ref|XP_008441151.1| (PREDICTED: WD40 repeat-containing protein SMU1 [Cucumis melo])

HSP 1 Score: 302.0 bits (772), Expect = 5.9e-79
Identity = 143/156 (91.67%), Postives = 148/156 (94.87%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           TND ARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNS+H+FPKNADHIVVCN
Sbjct: 358 TNDGARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSVHIFPKNADHIVVCN 417

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           KTSSIYIMTLQGQVVKSFSSGKREGGDFVAAC+SPKGEWIYCIGED      SH SGKLE
Sbjct: 418 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACLSPKGEWIYCIGEDRNMYCFSHLSGKLE 477

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
           HLMKVHEKDVIGV+HHPHRNLVATYSED+TMKLWKP
Sbjct: 478 HLMKVHEKDVIGVSHHPHRNLVATYSEDSTMKLWKP 513

[Close]

BLAST of Cp4.1LG01g26320 vs. NCBI nr
Match: gi|703112382|ref|XP_010100105.1| (WD40 repeat-containing protein SMU1 [Morus notabilis])

HSP 1 Score: 296.2 bits (757), Expect = 3.2e-77
Identity = 141/156 (90.38%), Postives = 145/156 (92.95%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           TND ARVITASSDCTVKVWDVKTTDCL TFKPPPPLRGGDASVNS+HLFPKN DHIVVCN
Sbjct: 394 TNDGARVITASSDCTVKVWDVKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNTDHIVVCN 453

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYC+GED      S+QSGKLE
Sbjct: 454 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNIYCFSYQSGKLE 513

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
           HLMKVH+KDVIGV HHPHRNLVATYSED TMKLWKP
Sbjct: 514 HLMKVHDKDVIGVTHHPHRNLVATYSEDCTMKLWKP 549

[Close]

BLAST of Cp4.1LG01g26320 vs. NCBI nr
Match: gi|947110873|gb|KRH59199.1| (hypothetical protein GLYMA_05G170500 [Glycine max])

HSP 1 Score: 295.4 bits (755), Expect = 5.5e-77
Identity = 135/150 (90.00%), Postives = 144/150 (96.00%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           TND +RVITASSDCT+KVWDVKTTDC+ TFKPPPPLRGGDASVNS+H+FPKN DHIVVCN
Sbjct: 358 TNDGSRVITASSDCTIKVWDVKTTDCIQTFKPPPPLRGGDASVNSVHIFPKNTDHIVVCN 417

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGEDSHQSGKLEHLMKVH 120
           KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYC+GEDS+QSGKLEHLMKVH
Sbjct: 418 KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDSYQSGKLEHLMKVH 477

Query: 121 EKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
           EK+VIGV HHPHRNLVAT+SED TMK WKP
Sbjct: 478 EKEVIGVTHHPHRNLVATFSEDCTMKSWKP 507

[Close]

BLAST of Cp4.1LG01g26320 vs. NCBI nr
Match: gi|225456944|ref|XP_002281533.1| (PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Vitis vinifera])

HSP 1 Score: 293.1 bits (749), Expect = 2.7e-76
Identity = 136/156 (87.18%), Postives = 144/156 (92.31%), Query Frame = 1


Query: 1   TNDVARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSIHLFPKNADHIVVCN 60
           TND  RV+TASSDCTVKVWDVKTTDCL TFKPPPPLRGGDASVN +HLFPKN DHI+VCN
Sbjct: 359 TNDGGRVVTASSDCTVKVWDVKTTDCLQTFKPPPPLRGGDASVNGVHLFPKNTDHIIVCN 418

Query: 61  KTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCIGED------SHQSGKLE 120
           +TSSIY+MTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYC+GED      S+QSGKLE
Sbjct: 419 RTSSIYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNIYCFSYQSGKLE 478

Query: 121 HLMKVHEKDVIGVNHHPHRNLVATYSEDNTMKLWKP 151
           HLMKVHEKDVIGV HHPHRNLVATYSED+TMKLWKP
Sbjct: 479 HLMKVHEKDVIGVTHHPHRNLVATYSEDSTMKLWKP 514

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g26320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SMU1_ARATH	3.1e-72	82.69	Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana GN=SMU1...	[more]
SMU1_CHICK	1.8e-51	60.26	WD40 repeat-containing protein SMU1 OS=Gallus gallus GN=SMU1 PE=2 SV=1	[more]
SMU1_BOVIN	5.2e-51	58.97	WD40 repeat-containing protein SMU1 OS=Bos taurus GN=SMU1 PE=2 SV=1	[more]
SMU1_CRIGR	5.2e-51	58.97	WD40 repeat-containing protein SMU1 OS=Cricetulus griseus GN=SMU1 PE=2 SV=1	[more]
SMU1_RAT	5.2e-51	58.97	WD40 repeat-containing protein SMU1 OS=Rattus norvegicus GN=Smu1 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g26320 vs. TrEMBL


Match Name	E-value	Identity	Description
W9RK20_9ROSA	2.2e-77	90.38	WD40 repeat-containing protein SMU1 OS=Morus notabilis GN=L484_014295 PE=4 SV=1	[more]
I1K4C1_SOYBN	3.8e-77	90.00	Uncharacterized protein OS=Glycine max GN=GLYMA_05G170500 PE=4 SV=1	[more]
D7SHM1_VITVI	1.9e-76	87.18	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g08930 PE=4 SV=...	[more]
A0A068VDP6_COFCA	2.5e-76	87.82	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00013408001 PE=4 SV=1	[more]
A0A067G502_CITSI	3.2e-76	87.82	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010324mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g26320 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73720.1	1.8e-73	82.69	transducin family protein / WD-40 repeat family protein	[more]
AT5G08390.1	6.4e-07	25.68	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G46280.1	5.4e-06	28.92	TGF-beta receptor interacting protein 1	[more]
AT5G23430.1	7.0e-06	25.00	Transducin/WD40 repeat-like superfamily protein	[more]

BLAST of Cp4.1LG01g26320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441804\|ref\|XP_004138672.1\|	9.1e-80	92.31	PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Cucumis sativus]	[more]
gi\|659081098\|ref\|XP_008441151.1\|	5.9e-79	91.67	PREDICTED: WD40 repeat-containing protein SMU1 [Cucumis melo]	[more]
gi\|703112382\|ref\|XP_010100105.1\|	3.2e-77	90.38	WD40 repeat-containing protein SMU1 [Morus notabilis]	[more]
gi\|947110873\|gb\|KRH59199.1\|	5.5e-77	90.00	hypothetical protein GLYMA_05G170500 [Glycine max]	[more]
gi\|225456944\|ref\|XP_002281533.1\|	2.7e-76	87.18	PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR019775	WD40_repeat_CS
IPR017986	WD40_repeat_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008380	RNA splicing
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016459	myosin complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016905	myosin heavy chain kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g26320.1	Cp4.1LG01g26320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 7..20 score: 0.15coord: 114..149 score: 0
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 110..149 score: 0.0036coord: 23..69 score:
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 117..150 score: 11.511coord: 1..29 score: 1
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 6..150 score: 2.2
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 117..150 score: 10.944coord: 1..29 score: 10
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 6..149 score: 1.88
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 7..21 scor
None	No IPR available	PANTHER	PTHR22848	WD40 REPEAT PROTEIN	coord: 1..150 score: 6.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g26320	Cucsa.088690	Cucumber (Gy14) v1	cgycpeB0164
Cp4.1LG01g26320	CmaCh15G000070	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g26320	CmaCh04G030330	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g26320	CmoCh15G000060	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g26320	CmoCh04G031550	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g26320	Cla011981	Watermelon (97103) v1	cpewmB465
Cp4.1LG01g26320	MELO3C008076	Melon (DHL92) v3.5.1	cpemeB400
Cp4.1LG01g26320	ClCG11G008790	Watermelon (Charleston Gray)	cpewcgB367
Cp4.1LG01g26320	CSPI02G24520	Wild cucumber (PI 183967)	cpecpiB385
Cp4.1LG01g26320	Lsi11G010090	Bottle gourd (USVL1VR-Ls)	cpelsiB322
Cp4.1LG01g26320	CsaV3_2G033060	Cucumber (Chinese Long) v3	cpecucB0482
Cp4.1LG01g26320	Bhi04G002098	Wax gourd	cpewgoB0538
Cp4.1LG01g26320	CsGy2G024280	Cucumber (Gy14) v2	cgybcpeB214
Cp4.1LG01g26320	Carg06105	Silver-seed gourd	carcpeB0034

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g26320	Cp4.1LG13g11810	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g26320	Cucumber (Chinese Long) v2	cpecuB386
Cp4.1LG01g26320	Watermelon (Charleston Gray)	cpewcgB356
Cp4.1LG01g26320	Watermelon (97103) v1	cpewmB454
Cp4.1LG01g26320	Melon (DHL92) v3.6.1	cpemedB465