Cp4.1LG01g25990 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCGATTGAAACAGTTAAGGTAATTTTGTTAGATGGAGGAGGAGGAGACGGGCCAGAAGAAGGCCACAAAGTATCTCTTCCCACCGGATCCAGTTCTTCAATCAAACGCTTCGCGAATGTGATCAACTTTTGGAACCCGTTAATTTCTTCTTCTTTTTTTTTTTTTTTTNTTTTTTTTTTGGGTTGAATCTTTTGCATAGTAAATTCGTCGTTTACTTTTCAGCCGGTTGTCGCCTTTCGAGGGGCCAGTGGCTTTCTTCTTCTTGCCTCTTTCCTCGTGGGTATTTTCAAAGCCTTGGGACTCTGATAAGAAAGGCGAGGCTTCTTCCTACGGTATATAAAATATTTACTTCTTTGCTTTGTTTTGATGTGTGAGATCTTGTAACCACCTCTCATTTTGGGATTTCCCCTGCTTATGATTTCGTTGATACAATGCCGTGGAGGAATGTTGGTGGATCTCTTTTTTGTTTTAAGATTTTCGGCGGCAGGTTTCAGGTTAGTGGGTTACCCGGTTGCTAAATTTCAAGGAAATTTTAATTGCTTTAACTCTGTGAATGATTGATCTGTCCAATGCGTTTTCATGTTGATTAGATTTGAAATTGAAATGTGTTCTTCTTTTTGGCATAGATTGAGATTTTTTCTTGAATTGTTTTGGGAAAAATGGTTTTTGTTCAGATGCTGACCAACTGTTTGAATAAATGTCTGTGAGAGCTTTAGGAGCTGCAGAAGCTTTGAATGTATGATACCATTCACTTGGTTGTTAAGCTTTTCTTTGTTTCAGATATAACGAAACGATGAAACGACAAAACGACGAATCGAAAGTAATGGGGTTTTGTTAGAGACTGGTTATGCTCTCTTTTGGGATTCTAGCAAGATAGCTTATAGTTGTAGATATTCTGGAGCTCTTAATAATACTTTTCCCCTGAAGGTTTTGTTGGGGTTATTTAGGTTGCATCACAAAGAAGCCCACAGCTTTCCTCCATAACTAGCGGGAGCATTCCACCCATTAATTTCCCATTGATAGATCACCATAATCAAGAGCAGCAAAAGGTATCATCTTTTATGCTTTGTTCTTCTCTCTCCCTTTTTCTTTTGTTTCTTTGCATTAGATTACTGATATCTCATTAGTGATCTGATTAATGCTGGTTCGAGAATATTCGCTCATGATTTTTCTTCTTTCCATAATCATATTTTACAATGGAATGCACTGCCATGCTACTTATAAGATCCCTCATTGGTTGGAGAGAGGAACGAAGCTTTCCTTTACAAGGGTGTGGAAACCTCTCTCTAGTAGACGCGTTTTAAAACCGTGAAGCTGACCGTGATACAGGCCAAAACGGGCAATATCTGCTAGTGGTGAGCGTAGGCTGTTACAAATGGTATCAAAGCTAGGCACCGGACGGTGGATTGTGAGATCCCACATTAGTTGGAGAGGGGAATGAAGCATTTCTTTATAAGGGTGTGGAAGCCTCTCCCTAGTAGACACATTTTCAAATTGTGAGACCGACGGCAATACGTAACAGCCAAAGTAGACAATATTTGCAGCAGTGGGCTTGAGCGGTTATATTTATTTTTTTGTTCTAGTTTCATTGTTTTTCTGTTTTTGTGCTTGCACAGAACAACAGAATGAGGGAAGTGCAGCTTGGTTCACACACGTTAAGGTCCGATGGAGTCACCGTTGCGAGGATACACATGCACGATTGGTTTATATTTCTTCTTCTTGTGCTGATTGAGTTCATCCTAAATCTTTCCCATCCATTTTATCGCTATGTTGGGAAGGACATGATGACTGATCTCAAATTTCCCTTTAAAGATAATACTGTTCCTTTCTGGGCTGTACACGTAGGTTTGCTTGTGTTTTTCTTGTCTATGAAAACCTTTAGATATAAGCTGGAATGGACACTTATGTGAACGCATTTCCTTTTCTTTTCTACATGTGGATGGTTAGATCTATGCAGTTCTTCTGCCAATAGCAGTTTTTCTGTTCGTATATTGGCGTAGAAAGGATGTCTATGATCTTCATCACGCCATACTAGGTGAGATACGTTCCTCATTATTTCCTTTGTCCACATCGATTGGAGAGAGAAACGAGTGCCAGCAAGGACGCTGAGCTTTGAAGGGGGATGGATTGTGAGATCCCACATCGGTCGGAGAGGAGAACAAAACATTTTTTATAAGGGTGTAGAAATCTCTCCCTAGTAGACGCGTTTTAAAAACTTTGAGGGAAAGCTCGAAGAGGACAATATCTGTTAGCTGTGGGCTTGGGCTGTTACATAGCTGATGTAAACTAGCAAACCGTGCAGGTCTCTTATACTCTGTCTTAGTAACAGCAGTCATTACCGATGCGATAAAAATTGCGGTGGGACGACCTCGACCGAACTTCTTTTGGCGTTGTTTTCCCGACGGGAAAGATGTGTGTTTCCTAAACTTAACGTTTCTATACACATCTTGCTTGGCTTGATGTTGCATACTGATATCTTGTTTCTCAGGTTTATGATAAACTAGGCAATGTTGTATGTCATGGCGATGAGCATGTTATCAAGGAAGGGCATAAGAGCTTTCCAAGTGGGCATACTTCATGTAAGTTACAAAATGTTATTCTTTCCCTTCTAAGTTGAAAAGTAAGCCATCCCTAGCAAGATACAATAACGACACGATTTTCGATACCGGGAACGGTATCTTTCGACTCGATGCAGTGTCTTTTGCTGGTCTCGGTTTCCTGTCATTGTATTTATCAGGGAAAATAAAAGCATTCGACCAGCGAGGCCACATTGCAAAACTCTGCATTGTTTTTCTTCCCTTGCTTTTCGCAGCTCTCGTTGGCATATCTCGGGTGGACGACTACTGGCACCATTGGCAGGATGTATTTGCTGGAGGTCTGCTCGGTACGTACATTTTTCTTTGTCGTCTCGTCGCATTCGCATCGTGTACATTACGATAAATAGTTATAAAGAGCTCTACTTTTGCAGGGCTGGTCATATCTACCTTCTGCTACTTGCAGTTCTTTCCTCCTCCGTACAACTCTCAAGGTATGGTTTTGACCCCAAAATCGTCGATGTGTGCGCGTTGCAGCTCGCTCGTCAGTCATATCTAAACCATGGAATGTTTTTACTGATTGTGGCTTGTAGGTTGGGGACCGTATGCATACTTTAGAGAGTTGGAGATGCTTGCTACTAATACCCAACCTCCAACGAATGGCACATTTGTGGTCAATCAAGAGGATGTCGAACGACAGACCGGGAACGAGGGGGACGACCGAAGCAACGGTAGATTTCTCCTCCTGTCCACCGATTCAAATTCTTGTTTGTCAATGCAGGAAATTGAAAGTGAAACTGAGGGGAAATAAGTGGCTTGCATATATGTATATTGTTGCTTTGGAGGCTTCCATGGCACAGCATTGCTTGTATGGGTGTGGTGCATAGGCTAATTAAACAATACGGATCGTTTGTATAGCACTGTCTTCTTTGTATACACACAAATACATGAAATTGAATCTCTTTCACCTTCAAACATTTTTTTTTTTTAATTTTTTACTTCTGAAC CATCGATTGAAACAGTTAAGGTAATTTTGTTAGATGGAGGAGGAGGAGACGGGCCAGAAGAAGGCCACAAAGTATCTCTTCCCACCGGATCCAGTTCTTCAATCAAACGCTTCGCGAATCCGGTTGTCGCCTTTCGAGGGGCCAGTGGCTTTCTTCTTCTTGCCTCTTTCCTCGTGGGTATTTTCAAAGCCTTGGGACTCTGATAAGAAAGGCGAGGCTTCTTCCTACGGTTTCAGATATAACGAAACGATGAAACGACAAAACGACGAATCGAAAGTTGCATCACAAAGAAGCCCACAGCTTTCCTCCATAACTAGCGGGAGCATTCCACCCATTAATTTCCCATTGATAGATCACCATAATCAAGAGCAGCAAAAGCTTGGTTCACACACGTTAAGGTCCGATGGAGTCACCGTTGCGAGGATACACATGCACGATTGGTTTATATTTCTTCTTCTTGTGCTGATTGAGTTCATCCTAAATCTTTCCCATCCATTTTATCGCTATGTTGGGAAGGACATGATGACTGATCTCAAATTTCCCTTTAAAGATAATACTGTTCCTTTCTGGGCTGTACACATCTATGCAGTTCTTCTGCCAATAGCAGTTTTTCTGTTCGTATATTGGCGTAGAAAGGATGTCTATGATCTTCATCACGCCATACTAGGCAATGTTGTATGTCATGGCGATGAGCATGTTATCAAGGAAGGGCATAAGAGCTTTCCAAGTGGGCATACTTCATGGAAAATAAAAGCATTCGACCAGCGAGGCCACATTGCAAAACTCTGCATTGTTTTTCTTCCCTTGCTTTTCGCAGCTCTCGTTGGCATATCTCGGGTGGACGACTACTGGCACCATTGGCAGGATGTATTTGCTGGAGGTCTGCTCGGGCTGGTCATATCTACCTTCTGCTACTTGCAGTTCTTTCCTCCTCCGTACAACTCTCAAGGTTGGGGACCGTATGCATACTTTAGAGAGTTGGAGATGCTTGCTACTAATACCCAACCTCCAACGAATGGCACATTTGTGGTCAATCAAGAGGATGTCGAACGACAGACCGGGAACGAGGGGGACGACCGAAGCAACGGTAGATTTCTCCTCCTGTCCACCGATTCAAATTCTTGTTTGTCAATGCAGGAAATTGAAAGTGAAACTGAGGGGAAATAAGTGGCTTGCATATATGTATATTGTTGCTTTGGAGGCTTCCATGGCACAGCATTGCTTGTATGGGTGTGGTGCATAGGCTAATTAAACAATACGGATCGTTTGTATAGCACTGTCTTCTTTGTATACACACAAATACATGAAATTGAATCTCTTTCACCTTCAAACATTTTTTTTTTTTAATTTTTTACTTCTGAAC ATGGAGGAGGAGGAGACGGGCCAGAAGAAGGCCACAAAGTATCTCTTCCCACCGGATCCAGTTCTTCAATCAAACGCTTCGCGAATCCGGTTGTCGCCTTTCGAGGGGCCAGTGGCTTTCTTCTTCTTGCCTCTTTCCTCGTGGGTATTTTCAAAGCCTTGGGACTCTGATAAGAAAGGCGAGGCTTCTTCCTACGGTTTCAGATATAACGAAACGATGAAACGACAAAACGACGAATCGAAAGTTGCATCACAAAGAAGCCCACAGCTTTCCTCCATAACTAGCGGGAGCATTCCACCCATTAATTTCCCATTGATAGATCACCATAATCAAGAGCAGCAAAAGCTTGGTTCACACACGTTAAGGTCCGATGGAGTCACCGTTGCGAGGATACACATGCACGATTGGTTTATATTTCTTCTTCTTGTGCTGATTGAGTTCATCCTAAATCTTTCCCATCCATTTTATCGCTATGTTGGGAAGGACATGATGACTGATCTCAAATTTCCCTTTAAAGATAATACTGTTCCTTTCTGGGCTGTACACATCTATGCAGTTCTTCTGCCAATAGCAGTTTTTCTGTTCGTATATTGGCGTAGAAAGGATGTCTATGATCTTCATCACGCCATACTAGGCAATGTTGTATGTCATGGCGATGAGCATGTTATCAAGGAAGGGCATAAGAGCTTTCCAAGTGGGCATACTTCATGGAAAATAAAAGCATTCGACCAGCGAGGCCACATTGCAAAACTCTGCATTGTTTTTCTTCCCTTGCTTTTCGCAGCTCTCGTTGGCATATCTCGGGTGGACGACTACTGGCACCATTGGCAGGATGTATTTGCTGGAGGTCTGCTCGGGCTGGTCATATCTACCTTCTGCTACTTGCAGTTCTTTCCTCCTCCGTACAACTCTCAAGGTTGGGGACCGTATGCATACTTTAGAGAGTTGGAGATGCTTGCTACTAATACCCAACCTCCAACGAATGGCACATTTGTGGTCAATCAAGAGGATGTCGAACGACAGACCGGGAACGAGGGGGACGACCGAAGCAACGGTAGATTTCTCCTCCTGTCCACCGATTCAAATTCTTGTTTGTCAATGCAGGAAATTGAAAGTGAAACTGAGGGGAAATAA MEEEETGQKKATKYLFPPDPVLQSNASRIRLSPFEGPVAFFFLPLSSWVFSKPWDSDKKGEASSYGFRYNETMKRQNDESKVASQRSPQLSSITSGSIPPINFPLIDHHNQEQQKLGSHTLRSDGVTVARIHMHDWFIFLLLVLIEFILNLSHPFYRYVGKDMMTDLKFPFKDNTVPFWAVHIYAVLLPIAVFLFVYWRRKDVYDLHHAILGNVVCHGDEHVIKEGHKSFPSGHTSWKIKAFDQRGHIAKLCIVFLPLLFAALVGISRVDDYWHHWQDVFAGGLLGLVISTFCYLQFFPPPYNSQGWGPYAYFRELEMLATNTQPPTNGTFVVNQEDVERQTGNEGDDRSNGRFLLLSTDSNSCLSMQEIESETEGK
BLAST of Cp4.1LG01g25990 vs. Swiss-Prot
Match: LPP3_ARATH (Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 8.1e-93 Identity = 175/350 (50.00%), Postives = 217/350 (62.00%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. Swiss-Prot
Match: LPP2_ARATH (Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana GN=LPP2 PE=2 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 6.0e-80 Identity = 142/258 (55.04%), Postives = 172/258 (66.67%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. Swiss-Prot
Match: LPP1_ARATH (Lipid phosphate phosphatase 1 OS=Arabidopsis thaliana GN=LPP1 PE=2 SV=2) HSP 1 Score: 276.6 bits (706), Expect = 4.2e-73 Identity = 137/270 (50.74%), Postives = 161/270 (59.63%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. Swiss-Prot
Match: LPP4_ARATH (Probable lipid phosphate phosphatase 4 OS=Arabidopsis thaliana GN=LPP4 PE=2 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 3.2e-65 Identity = 120/263 (45.63%), Postives = 160/263 (60.84%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. Swiss-Prot
Match: PLPP5_HUMAN (Phospholipid phosphatase 5 OS=Homo sapiens GN=PLPP5 PE=1 SV=2) HSP 1 Score: 94.4 bits (233), Expect = 2.9e-18 Identity = 47/129 (36.43%), Postives = 73/129 (56.59%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. TrEMBL
Match: A0A0A0LMJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404960 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 4.0e-107 Identity = 206/316 (65.19%), Postives = 225/316 (71.20%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. TrEMBL
Match: Q9LLQ7_VIGUN (Phosphatidic acid phosphatase alpha OS=Vigna unguiculata GN=PAPa PE=2 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 5.3e-91 Identity = 183/350 (52.29%), Postives = 218/350 (62.29%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. TrEMBL
Match: R0G5R3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10014038mg PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 4.4e-90 Identity = 172/353 (48.73%), Postives = 220/353 (62.32%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. TrEMBL
Match: V4M154_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10020998mg PE=4 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 1.3e-89 Identity = 173/354 (48.87%), Postives = 220/354 (62.15%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. TrEMBL
Match: A0A078I081_BRANA (BnaC05g48240D protein OS=Brassica napus GN=BnaC05g48240D PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 1.4e-88 Identity = 170/353 (48.16%), Postives = 216/353 (61.19%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. TAIR10
Match: AT3G02600.1 (AT3G02600.1 lipid phosphate phosphatase 3) HSP 1 Score: 342.0 bits (876), Expect = 4.5e-94 Identity = 175/350 (50.00%), Postives = 217/350 (62.00%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. TAIR10
Match: AT1G15080.1 (AT1G15080.1 lipid phosphate phosphatase 2) HSP 1 Score: 299.3 bits (765), Expect = 3.4e-81 Identity = 142/258 (55.04%), Postives = 172/258 (66.67%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. TAIR10
Match: AT2G01180.1 (AT2G01180.1 phosphatidic acid phosphatase 1) HSP 1 Score: 276.6 bits (706), Expect = 2.3e-74 Identity = 137/270 (50.74%), Postives = 161/270 (59.63%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. TAIR10
Match: AT3G18220.1 (AT3G18220.1 Phosphatidic acid phosphatase (PAP2) family protein) HSP 1 Score: 250.4 bits (638), Expect = 1.8e-66 Identity = 120/263 (45.63%), Postives = 160/263 (60.84%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. NCBI nr
Match: gi|659081360|ref|XP_008441293.1| (PREDICTED: lipid phosphate phosphatase 2-like isoform X1 [Cucumis melo]) HSP 1 Score: 434.9 bits (1117), Expect = 1.5e-118 Identity = 231/359 (64.35%), Postives = 254/359 (70.75%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. NCBI nr
Match: gi|659081362|ref|XP_008441294.1| (PREDICTED: lipid phosphate phosphatase 2-like isoform X2 [Cucumis melo]) HSP 1 Score: 434.5 bits (1116), Expect = 1.9e-118 Identity = 231/358 (64.53%), Postives = 253/358 (70.67%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. NCBI nr
Match: gi|449441718|ref|XP_004138629.1| (PREDICTED: lipid phosphate phosphatase 2 isoform X1 [Cucumis sativus]) HSP 1 Score: 430.6 bits (1106), Expect = 2.7e-117 Identity = 229/358 (63.97%), Postives = 248/358 (69.27%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. NCBI nr
Match: gi|659081364|ref|XP_008441295.1| (PREDICTED: lipid phosphate phosphatase 2-like isoform X3 [Cucumis melo]) HSP 1 Score: 402.5 bits (1033), Expect = 8.0e-109 Identity = 208/316 (65.82%), Postives = 230/316 (72.78%), Query Frame = 1
BLAST of Cp4.1LG01g25990 vs. NCBI nr
Match: gi|659081366|ref|XP_008441296.1| (PREDICTED: putative lipid phosphate phosphatase 3, chloroplastic isoform X4 [Cucumis melo]) HSP 1 Score: 402.5 bits (1033), Expect = 8.0e-109 Identity = 208/316 (65.82%), Postives = 230/316 (72.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |