Cp4.1LG01g25670 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g25670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	COP9 signalosome complex subunit 3
Location	Cp4.1LG01 : 20948096 .. 20955124 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTGCTTAAAAGAGGAATTGGGCTGAGATTATTGGGCCAAGCTTATTGGGCCGGACATAGCGCAGAGCCCAGAAGATAGAGTTGAGGCCGTAGGACATGGGCTCAATCCCTTCTTCCAACGATCTGGTAATTCACCCATCGGATTCCGACTTGAGAAGAAAGAAAGGAGTGATCGATCAGTAGAAAGCTCCATTTCAATTGACTCTCTCGAAGGTACTCCTCCTGTGCAGGTGATAGAGCCACTGTTAAGCTTCAACTGAGAGCTTCGCATTACCCGATCATGGGCACGGTTGAAGTTCTCGTGGCACAAATCCAAGGGCTGTCCAGCACCGCCGGCGATATCTCACGCCTCCATACTATTCTCAAGCAATCAGAAGAACTGCTTCACTCCGACACCGCTTGTTTACCTTCTGCATTGGCTCAACTTGATGCTTCAAAACATTCTTTAGGATATCTCTACATTCTGTAAGTTTTTATTCTCTGAATTGTTCTATCTGGATGTTGGTTGTTTAGACAAATTAGGGCCTGGCCTGCCTTTCTTGTATGTTACACTACTATAGTACTATTAAGGATTCATTCCTATCGGTGAGAGATTTTTTTTGAGCAATCATTTCTTTTGGTATAAGTTTGAAGCGACGGAGTCCAAGAATTGGCGTTTGACGGGTTTGTATTGACGAGTGTGTGGTTGGAGCAGACATGGAAATGCATCTGATTAAATCCTTTTACCATTTTCATTTTTGAATATGTATGCAGAGGGACTGACCTATAATGTTTTCTTGAAATATATTTGCAGAGAGGCATACACATCCGTTCCAATTTCACAAGAGCAATACAGTTCAACTGCTCTGACTATTTCAAGATTTCTCTCTTCTTGCAACCCGGAGCAGATTCGTTTAGCACCTGAAAAATGCAAGTCATTCCTGAAAATTGATCGTTATTATTAATAACATGTGTGATTACTGCTATCTGGATTTTCGACTATCTTTAATTTGATTCTGCCGATTGTGCAGTCGTCTCAGTTTGCAAGAGGTTGAAAGATCAAGTTGTCCTACTTGAAGCTCCAATTAGAGGGGTGGCTCCGCTTCTTACTGCTATTAGAAAACTCCAGATCTCTTCAGAACATTTAACCACTATACATCCGGAGTTCCTCCTTCTTTGCTTATTAGCCAAGTGCTACAAAACTGGCAGATCTATATTGGATAATGATATTCTTGAGGTTGATCAACCAAGGGACCTGTTTCTTTATTGTTATTACGGGTGAGTTACTTTTCTTCTTCACCGTGAACTCTCAATTGATGTATTTTTCCTTCATTAGTAAAGATGCATTTGATTATCTTCATGTTTTTTGTCAACTTGGTTATTCCTTCATATGTTATTTCTCAAAGTTTATATATATATATTTTTAATTTTTGCAAATGATATCTCCTCTTTCTTTCTTTCTATCTTTCTTTATTATCCCCCTTCTCTTGGATGTTGATTTTATTCTATGTCATCTTTGAGGACTTTTATGGTGCATCTAAAATATGTTTAGTGGTCAATGATTTAGGGTGAAAAGGCTTTTATAGTGCTTCCATATGGAGTTCGGCTGCTTTTCTAGCTAAGCAAGAATTATAACGTTAAGAAATTTTATGGTGTATGTGAAACATCTTATGTAGTTAATCTAGGTTTTTTTGACTTATTTCATATTATGCTAATGAGTGTGCTACCATTTAGTCAAAAATTTCTATTGATCTCTTTTTGAGCTCTGCTGTTTGTAGGAGTAGATCATATTTACTTTTTGTTGTATTGTTTTTCCTTTTGTTGTAGTAGCTCGTTAGGGTTTGTTACAATTGGGTGCAACTTTGACTAATTTTGGTGGAATACCTTTTACCTTTTACCTTGAAACATTGGTTTCTTGAAACTTCGAAGACATTTAATAGGTGACAGTATAGTTTAAACCCATAACCTCAAGGCACCTGGTCTATAGTTTGTTTCTTTGTCCATTCAACTAGCTAGTGGCGTCTGTGTGTTTTGCTTTACGATAGTGTTATTATTGATGTGACTATGGATGAGATCAACATCTTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTAAATAAGGATAATACATGATATATTTGAAGACTTCATGCCCATCAGATTGGTAACCAACTAATGTAAAATTAATAATAAAGTCTTGGATGAGGGGAGTGCTCTCCACACTATTTTCAGTTTCTAGGGCCTTTTTTTGTTGGGAGATGGGTTCTTGAAGAAACTTTTGTTGCTACCGAATCAATCAAAGATTATGGGGAGTAAAATTTGTAAAAAGGGAGGGGTTGTCTTTAAGATTGATTGATTTTGAGAAGTATTATAATCATGTTAATTGGGATTATTGGACAGTTTTGTGAAAAAAAGGGATTTGGGCTGGTTTGTTGGAGATCCCCATTTAAAACTATCTTCTAATGGACGGCCTCTTAGTGGTTAGCAAGCTCAAAATTAAAATCTTTTCAACTAAGAGAATTAGGTAGGGCGATCCTCTGTCATTGCTATTGGGAGGCCTTTTTGTAAACCTTTGGTGTGATGGGAATAACTCATCGCCCCTCCTTGTTTATGTTTTTTTCGCTAATACAATTTTTCATTTCTTATAAAAAAAAATACCTTCGTGAGCATTCCTTTTCCTCATAGTGGTTCACATACTTAAATAAGTTCTCATCTAGAGAGATAGATAGGTACTTGGTTGAAAGTTATATGTTGGAAGGAATAAGGTTCAAATATTCCTAGGCTATGATCAATTGGGATAAGTTTTTTGTTTCTAGCATTAATTGTTACATTTTCCCTACGCCTGCGAGGCATGAGGCTTTTACATTGTTTCCTACTTGGATCTTTTATTATGGTGTAATCTTAGGTCAATTACATTTTGGATCCCTGCCATGATTAAAATAATCTGCCTCCTTACAGGAAGACTAACTTTTGTTCAATTTGTTTTAAAAGTAGGATCTCTCCGTATCCTCAAAAGGGTGGAGAAAATTATATCTCAAAGTCTATTGAAGAGGATAGGTTGAAGATATGGAATTTTTTCCTCTTGTGGCTAAGTGGTTGTAGCTAGTAAGGCAAAATAGGTGACATCTAGCAAAGTGGAACAGAACACGACTAGAGTAACTCAAGACACTTTCAGGAACTGATGGAAGGCTATTTCTATGGGTCTCTCTTGCTTTTCCAGATTATTCAAGTTTTCCATTGGGGAGGGATCTAGGTGTATTTTTGGAAGGGTGATGATCTTCTTTATTGCTTTTTCCACCTCTATAACCTTTAAGAGGTTTTTTTCCTGATATAGAAGCTTGGGTTATCCTCTCTGCTTTCCTTCTATATGATTTTCCATCTTTGCCCGAGGTACTAAGACTTTCATGGTTGGACTCCAAGTCCCAATGAGTGCTTTCTTGTCAATCTTTTCGCATTGAATGCTCTTCCTTTTCATAGATTACCTTTCTTGTCCTATGCTTTGCAAGGTTAAGTTGTCCTGAAATCTTGAAAATTTTTCATGTTTGGTAGTGATAAAGTATTGATATAAAACTAAATTTGTCATAACCTATCAACTTAATCTTCCAGGTTTATTGGTGATTTCACCCAACATTAGAGCAGGAGATTCGATAATCGAACCCCTGTAATATCTTTTCCTCCCCAATTCTTTTTTTTTTTCACTTGTTAGGTCTTCTACAAGTTTTCAAGCCCAGAAGTGAGGAGTGTTAAAATATTAATATAAAATTAAATTTACCATAATCCATCAACTCAAGTTTTTGGATTGATTTATGATTTAATAAGTAGCTTATATGAGCATTAAGACCACTATCTTTGTTCAAGGGTCGTTGTCTATTGGTTTTGGATATTTAGTAGTTTGTCTTTTGTAAATGCATGTTAGAGGACTTAGATTATATCTCATGGAGATGTCAATTTTCTACGGCTGGACATTTCGGGGGTGTGACATTGGCCCTAAATTGGAAATTTCAGTGAAGACAACCGAAAGGCTTTTCATGAGTTGCTTTTGTTGTGAAGAGATGGAGGAGATTTTTTTAGGGTGTAAAGGAGTATTAGGTGGAGGAATGGTTTGGCCCATTTTATGCTTCCCTCTGCCCTTTATATGTATTCTTATATTTTGAAATGATCATTTATCTTTTATTTTTAACAACCGGAGTATATTTGTATATTGTTTATTTTGTTTTCTTGGCTTCCTTTTGTTTCAGGCTTTTATTTGTGAATTAGCTTGTTAGCTGACTTTCATTCCTTGTTAATGAAAGTTTGGTTTCACATTTAAGTTTCTTTTTTATTTTTTATTTTTTGAAAAATCAGGCCTCTCCGAACTTCATTTATTCAATCATTTAACTGTCTTATAAAAAACATTTATTTAATAGGAAAGCAACTAACTATGTTTAAGCAGGCTTGTTGTAAGTTGTGAATGACATTGTCCTTATAAAAAAATGTGATACATAATTTAATTCTATGAGATCATTCATATGCTGAGATTCAATTTTGTCTTTCTCTATAAATAGGGATTTTCTGATGATATTTTCTTATGTGACAGGGGGATGATTTGCATAGGACTAAAGCTATTTCCTAAAGCGCTTGAGCTTCTTCATAATGTGCACCATCTAATGGAACTCTTTCCATTGATACTTTTGATTTGAATTTTTTAACGTGTTTTTGGATGATCTGACAGCCACTCCCCATATTTTTGTTACAGGCTGTAACTTCTCCAATGTCATCAATGAATGCTATAGCTGTTGAAGCATATAAAAAGTACATTTTGCTCTCCCTCATTTACAATGGACAAGTATGCTATTCTTTCTATCTGCTTTATTGTTAGTTTTTATCATTGATTTTAAGGCCTCAAATATTTGGAAATGAGGAAGGAATATCTGGAGGTTGTTTTTTAGATTTCATCATGTTAGGAGTATAAAATATGAATTCTGTTCTTGCTTCTTATATTGAATACTGGTACAATTGTCAATCAGATCTTAGAGTTAATAAATATTCTCATATCTCTGTTTTTTTAGCTTTTTATGGCTCTACTATCTCCATATTTGTCACCTTTCTGATGGTAACTATAAGCCTCGACCTACGGAAAAAAATCTCGAAAAAATGAGATGTTCCACCAAGGAGGTGGGTAATGTGTAATTATTATTTCCTCAACAAGGATGTAAATTGTGTGATCATCGTTGGATTTTGACTAGCTGAGCAAACTATCTCGAATATTTGTTTCATAGAATTTTAAACACAGTAACACTTTGCAGCATAACGGGGTTCTTGTTGCTTTTAGCTTTGAGTCACTTAGTATGCTTTTATTTCCTATGATGTTAAGGAGACTAATTTGCCTCTACATGCATCTGATGGCAGTTTTCGATTAGTCTCCCGAAGTACACTTCTTCAGTAGCACAGAGAAATTTGAAAATTTTCTGTCAGGTACTGTAAATTTGAACTGAAAAGCTTCTCTTTGTTCATGGACAAATACTTAGATACATTTATTTCAATGTTTGATTTCAACAAAATGTGAAGTTACCTCATTTTGAAACTGTAGGAATCAATGATCATTTTTGGATTTAGTTATCGATTTTAGAAATGAAAATCAAATCCATCAATGGATCGATGGATCTAGACTTGCTTGAAATTAGAAATTTTCTTTGCCATGAGTGATGCAGTTCTTTATTGCAATCCTGAAAAATTGTCCATCAAGCTCTAGATGTAGATGCCATCTAGATTGTGTATAGGTGGAACGCAATCTTATTTATGATTGATCAAAGCAGCATTGTGGGTATAATAGATATAAATTGCTCTTAGAGTGAATGATTTAGTGCTGGTCTACTTTGGTATATTTTTGCTTCAAATGTGCTGATGGAAACTATGCACTTGGGTTACGAAAAAATGTATTATCAGATCCAGTTGCTATCCGTGTGCTTGTATCCCCCTTCCCTTTTCTGTGATCCAAGTGACGTGTCTATGCTACTTGTTTTTCTTTCCTCTTCTCCAGCCCTACATTGAACTGGCGAATAGTTATAGCACGGGAAACGTTGACGAATTAGACACTGTTTTTCAAACAAACAGGGAGAAATTTGAAAATGTAAGAATTCCTATTTCACTATGTTATCACTTCAGATTGGTCCAATTAAATGGTGTGTGCATGCAGCAGAGAAGAGACCTTTGGTTTGTCGATCTATCATCTGTATGCTTCTGGGTTCTTGATATGAGTTATTGGTCGTGTTATACCAGGACAACAATCTTGGACTCGTGAAGCAGGCTGTATCTTCTCTGTATAAACGCAACATTCAGAGATTGACGCAGACGTACTTGACCCTCTCTCTTCAAGATATAGCCAATTCTGTTAAACTCAACAGCCCTAAGGAAGCTGAAATGCATGTGCTACGAATGGTAATTTCATAATTGCAGGATTAATCTATTAATCAACCTCCATCTCTTGTAATATCAGTTTTTGTTCCAATTTTAGATCCAGGACGGTGAGATTTTTGCAACAATTAATCAAAAGGATGGAATGGTCAGCTTTCTAGAGGATTCTGAACAGTACAAATCCTGCAAGATGGTTGAGCATATTGACTCGTCGATCCAGAGGTATGATGTTTGTGATTGATTGATTGTGGGATGTTCGGTTCAGGTTTTACTCTGTATCTAGCAAAGGTGAGCATCTCTAAATCAAAATCTCATTTTGAATTGTAGATAGGTAAAACTATAAAAAGAAAATTTGCTGTTTTCAGGCTGGAAGAGAGAGGCAGAGATTCGATTATGACGACTTCGATTCTGTTCCTCAAAAATTTAATATTTGAATGGATAACCCCCCCACCCCCCACCCTATGTACTGTGGATATTATAGAACAGGGAATTTTGAGGGAGAGCAATGCAAAATGGTTTGTATCTTTTTCCTTCCTCGCGTTATTGTTCCAAGAGACGAAGCCTGTTAAAAGGCCATTTGCTCCTCGTGAGGAAATGTATGTTTGTAATCCGTCCTGTTTTCTCAAAAACTAATTTTGCGTTTGCCGTTTCTTGAAG

mRNA sequence

TATTGCTTAAAAGAGGAATTGGGCTGAGATTATTGGGCCAAGCTTATTGGGCCGGACATAGCGCAGAGCCCAGAAGATAGAGTTGAGGCCGTAGGACATGGGCTCAATCCCTTCTTCCAACGATCTGGTAATTCACCCATCGGATTCCGACTTGAGAAGAAAGAAAGGAGTGATCGATCAGTAGAAAGCTCCATTTCAATTGACTCTCTCGAAGGTACTCCTCCTGTGCAGGTGATAGAGCCACTGTTAAGCTTCAACTGAGAGCTTCGCATTACCCGATCATGGGCACGGTTGAAGTTCTCGTGGCACAAATCCAAGGGCTGTCCAGCACCGCCGGCGATATCTCACGCCTCCATACTATTCTCAAGCAATCAGAAGAACTGCTTCACTCCGACACCGCTTGTTTACCTTCTGCATTGGCTCAACTTGATGCTTCAAAACATTCTTTAGGATATCTCTACATTCTAGAGGCATACACATCCGTTCCAATTTCACAAGAGCAATACAGTTCAACTGCTCTGACTATTTCAAGATTTCTCTCTTCTTGCAACCCGGAGCAGATTCGTTTAGCACCTGAAAAATGCAAGTCATTCCTGAAAATTGATCTCGTCTCAGTTTGCAAGAGGTTGAAAGATCAAGTTGTCCTACTTGAAGCTCCAATTAGAGGGGTGGCTCCGCTTCTTACTGCTATTAGAAAACTCCAGATCTCTTCAGAACATTTAACCACTATACATCCGGAGTTCCTCCTTCTTTGCTTATTAGCCAAGTGCTACAAAACTGGCAGATCTATATTGGATAATGATATTCTTGAGGTTGATCAACCAAGGGACCTGTTTCTTTATTGTTATTACGGGGGGATGATTTGCATAGGACTAAAGCTATTTCCTAAAGCGCTTGAGCTTCTTCATAATGCTGTAACTTCTCCAATGTCATCAATGAATGCTATAGCTGTTGAAGCATATAAAAAGTACATTTTGCTCTCCCTCATTTACAATGGACAATTTTCGATTAGTCTCCCGAAGTACACTTCTTCAGTAGCACAGAGAAATTTGAAAATTTTCTGTCAGCCCTACATTGAACTGGCGAATAGTTATAGCACGGGAAACGTTGACGAATTAGACACTGTTTTTCAAACAAACAGGGAGAAATTTGAAAATGACAACAATCTTGGACTCGTGAAGCAGGCTGTATCTTCTCTGTATAAACGCAACATTCAGAGATTGACGCAGACGTACTTGACCCTCTCTCTTCAAGATATAGCCAATTCTGTTAAACTCAACAGCCCTAAGGAAGCTGAAATGCATGTGCTACGAATGATCCAGGACGGTGAGATTTTTGCAACAATTAATCAAAAGGATGGAATGGTCAGCTTTCTAGAGGATTCTGAACAGTACAAATCCTGCAAGATGGTTGAGCATATTGACTCGTCGATCCAGAGGTATGATGCTGGAAGAGAGAGGCAGAGATTCGATTATGACGACTTCGATTCTGTTCCTCAAAAATTTAATATTTGAATGGATAACCCCCCCACCCCCCACCCTATGTACTGTGGATATTATAGAACAGGGAATTTTGAGGGAGAGCAATGCAAAATGGTTTGTATCTTTTTCCTTCCTCGCGTTATTGTTCCAAGAGACGAAGCCTGTTAAAAGGCCATTTGCTCCTCGTGAGGAAATGTATGTTTGTAATCCGTCCTGTTTTCTCAAAAACTAATTTTGCGTTTGCCGTTTCTTGAAG

Coding sequence (CDS)

ATGGGCACGGTTGAAGTTCTCGTGGCACAAATCCAAGGGCTGTCCAGCACCGCCGGCGATATCTCACGCCTCCATACTATTCTCAAGCAATCAGAAGAACTGCTTCACTCCGACACCGCTTGTTTACCTTCTGCATTGGCTCAACTTGATGCTTCAAAACATTCTTTAGGATATCTCTACATTCTAGAGGCATACACATCCGTTCCAATTTCACAAGAGCAATACAGTTCAACTGCTCTGACTATTTCAAGATTTCTCTCTTCTTGCAACCCGGAGCAGATTCGTTTAGCACCTGAAAAATGCAAGTCATTCCTGAAAATTGATCTCGTCTCAGTTTGCAAGAGGTTGAAAGATCAAGTTGTCCTACTTGAAGCTCCAATTAGAGGGGTGGCTCCGCTTCTTACTGCTATTAGAAAACTCCAGATCTCTTCAGAACATTTAACCACTATACATCCGGAGTTCCTCCTTCTTTGCTTATTAGCCAAGTGCTACAAAACTGGCAGATCTATATTGGATAATGATATTCTTGAGGTTGATCAACCAAGGGACCTGTTTCTTTATTGTTATTACGGGGGGATGATTTGCATAGGACTAAAGCTATTTCCTAAAGCGCTTGAGCTTCTTCATAATGCTGTAACTTCTCCAATGTCATCAATGAATGCTATAGCTGTTGAAGCATATAAAAAGTACATTTTGCTCTCCCTCATTTACAATGGACAATTTTCGATTAGTCTCCCGAAGTACACTTCTTCAGTAGCACAGAGAAATTTGAAAATTTTCTGTCAGCCCTACATTGAACTGGCGAATAGTTATAGCACGGGAAACGTTGACGAATTAGACACTGTTTTTCAAACAAACAGGGAGAAATTTGAAAATGACAACAATCTTGGACTCGTGAAGCAGGCTGTATCTTCTCTGTATAAACGCAACATTCAGAGATTGACGCAGACGTACTTGACCCTCTCTCTTCAAGATATAGCCAATTCTGTTAAACTCAACAGCCCTAAGGAAGCTGAAATGCATGTGCTACGAATGATCCAGGACGGTGAGATTTTTGCAACAATTAATCAAAAGGATGGAATGGTCAGCTTTCTAGAGGATTCTGAACAGTACAAATCCTGCAAGATGGTTGAGCATATTGACTCGTCGATCCAGAGGTATGATGCTGGAAGAGAGAGGCAGAGATTCGATTATGACGACTTCGATTCTGTTCCTCAAAAATTTAATATTTGA

Protein sequence

MGTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLYILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQVVLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQPRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQFSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLVKQAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQKDGMVSFLEDSEQYKSCKMVEHIDSSIQRYDAGRERQRFDYDDFDSVPQKFNI

Homology

[Close]

BLAST of Cp4.1LG01g25670 vs. Swiss-Prot
Match: CSN3_ARATH (COP9 signalosome complex subunit 3 OS=Arabidopsis thaliana GN=CSN3 PE=1 SV=2)

HSP 1 Score: 454.1 bits (1167), Expect = 1.6e-126
Identity = 246/433 (56.81%), Postives = 308/433 (71.13%), Query Frame = 1


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLY 60
           + +VE ++  IQGLS +  D+S LH +L+ +++ L ++     S L QLDASKHSLGYLY
Sbjct: 5   VNSVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSLGYLY 64

Query: 61  ILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQV 120
            LE  T  P+S+E+ +     I+RF++SC+  QIRLA  K         VS+CK LKD V
Sbjct: 65  FLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYK--------FVSLCKILKDHV 124

Query: 121 VLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQ 180
           + L  P+RGV PLL A++KLQ+SS+ LT +HP+ L LCL AK YK+G SIL +DI+E+DQ
Sbjct: 125 IALGDPLRGVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQ 184

Query: 181 PRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQ 240
           PRD FLY YYGGMICIGLK F KALELL+N VT+PM  +NAIA+EAYKKYIL+SLI+NGQ
Sbjct: 185 PRDFFLYSYYGGMICIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSLIHNGQ 244

Query: 241 FSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLVK 300
           F+ +LPK  S+ AQR+ K +  PYIEL N Y+ G + EL+ +      +FE D NLGLVK
Sbjct: 245 FTNTLPKCASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKNLGLVK 304

Query: 301 QAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQKDG 360
           QAVSSLYKRNI RLTQ YLTLSLQDIAN V+L + KEAEMHVL+MIQDG+I A INQKDG
Sbjct: 305 QAVSSLYKRNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMIQDGQIHALINQKDG 364

Query: 361 MVSFLEDSEQYKSCKMVEHIDSSIQRY----------------------DAGRERQRFDY 411
           MV FLED EQYKS +M+E +DS IQR                         GRERQR+D+
Sbjct: 365 MVRFLEDPEQYKSSEMIEIMDSVIQRTIGLSKNLLAMDESLSCDPLYLGKVGRERQRYDF 424

[Close]

BLAST of Cp4.1LG01g25670 vs. Swiss-Prot
Match: CSN3_PONAB (COP9 signalosome complex subunit 3 OS=Pongo abelii GN=COPS3 PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.4e-74
Identity = 164/387 (42.38%), Postives = 240/387 (62.02%), Query Frame = 1


Query: 4   VEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLYILE 63
           +E  V  ++ LS+  G +++L  ++ +S ELL  + + L + L  LD  +HSLG L +L 
Sbjct: 5   LEQFVNSVRQLSAQ-GQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 64  AYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQVVLL 123
              S+P S   + +    +  F+S+CN E IR A +            +C +L + +V  
Sbjct: 65  VKFSMP-SVPDFETLFSQVQLFISTCNGEHIRYATDT--------FAGLCHQLTNALVER 124

Query: 124 EAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQPRD 183
           + P+RG+  L  AI K+Q+++  LT+IH +   LCLLAKC+K     LD D++++ +   
Sbjct: 125 KQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENG 184

Query: 184 LF------LYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIY 243
            +       Y YYGGMI  GLK F +AL     A+T+P  +++ I +E+YKKYIL+SLI 
Sbjct: 185 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 244

Query: 244 NGQFSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLG 303
            G+    LPKYTS +  R +K     Y ELA  YST N  EL  +   + E F  DNN+G
Sbjct: 245 LGKVQ-QLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMG 304

Query: 304 LVKQAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQ 363
           LVKQ +SSLYK+NIQRLT+T+LTLSLQD+A+ V+L+ P+EAE +VL MI+DGEIFA+INQ
Sbjct: 305 LVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQ 364

Query: 364 KDGMVSFLEDSEQYKSCKMVEHIDSSI 385
           KDGMVSF ++ E+Y +  M+ +ID  +
Sbjct: 365 KDGMVSFHDNPEKYNNPAMLHNIDQEM 380

[Close]

BLAST of Cp4.1LG01g25670 vs. Swiss-Prot
Match: CSN3_HUMAN (COP9 signalosome complex subunit 3 OS=Homo sapiens GN=COPS3 PE=1 SV=3)

HSP 1 Score: 281.6 bits (719), Expect = 1.4e-74
Identity = 164/387 (42.38%), Postives = 240/387 (62.02%), Query Frame = 1


Query: 4   VEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLYILE 63
           +E  V  ++ LS+  G +++L  ++ +S ELL  + + L + L  LD  +HSLG L +L 
Sbjct: 5   LEQFVNSVRQLSAQ-GQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 64  AYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQVVLL 123
              S+P S   + +    +  F+S+CN E IR A +            +C +L + +V  
Sbjct: 65  VKFSMP-SVPDFETLFSQVQLFISTCNGEHIRYATDT--------FAGLCHQLTNALVER 124

Query: 124 EAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQPRD 183
           + P+RG+  L  AI K+Q+++  LT+IH +   LCLLAKC+K     LD D++++ +   
Sbjct: 125 KQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENG 184

Query: 184 LF------LYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIY 243
            +       Y YYGGMI  GLK F +AL     A+T+P  +++ I +E+YKKYIL+SLI 
Sbjct: 185 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 244

Query: 244 NGQFSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLG 303
            G+    LPKYTS +  R +K     Y ELA  YST N  EL  +   + E F  DNN+G
Sbjct: 245 LGKVQ-QLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMG 304

Query: 304 LVKQAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQ 363
           LVKQ +SSLYK+NIQRLT+T+LTLSLQD+A+ V+L+ P+EAE +VL MI+DGEIFA+INQ
Sbjct: 305 LVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQ 364

Query: 364 KDGMVSFLEDSEQYKSCKMVEHIDSSI 385
           KDGMVSF ++ E+Y +  M+ +ID  +
Sbjct: 365 KDGMVSFHDNPEKYNNPAMLHNIDQEM 380

[Close]

BLAST of Cp4.1LG01g25670 vs. Swiss-Prot
Match: CSN3_MACFA (COP9 signalosome complex subunit 3 OS=Macaca fascicularis GN=COPS3 PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.4e-74
Identity = 164/387 (42.38%), Postives = 240/387 (62.02%), Query Frame = 1


Query: 4   VEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLYILE 63
           +E  V  ++ LS+  G +++L  ++ +S ELL  + + L + L  LD  +HSLG L +L 
Sbjct: 5   LEQFVNSVRQLSAQ-GQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 64  AYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQVVLL 123
              S+P S   + +    +  F+S+CN E IR A +            +C +L + +V  
Sbjct: 65  VKFSMP-SVPDFETLFSQVQLFISTCNGEHIRYATDT--------FAGLCHQLTNALVER 124

Query: 124 EAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQPRD 183
           + P+RG+  L  AI K+Q+++  LT+IH +   LCLLAKC+K     LD D++++ +   
Sbjct: 125 KQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENG 184

Query: 184 LF------LYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIY 243
            +       Y YYGGMI  GLK F +AL     A+T+P  +++ I +E+YKKYIL+SLI 
Sbjct: 185 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 244

Query: 244 NGQFSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLG 303
            G+    LPKYTS +  R +K     Y ELA  YST N  EL  +   + E F  DNN+G
Sbjct: 245 LGKVQ-QLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMG 304

Query: 304 LVKQAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQ 363
           LVKQ +SSLYK+NIQRLT+T+LTLSLQD+A+ V+L+ P+EAE +VL MI+DGEIFA+INQ
Sbjct: 305 LVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQ 364

Query: 364 KDGMVSFLEDSEQYKSCKMVEHIDSSI 385
           KDGMVSF ++ E+Y +  M+ +ID  +
Sbjct: 365 KDGMVSFHDNPEKYNNPAMLHNIDQEM 380

[Close]

BLAST of Cp4.1LG01g25670 vs. Swiss-Prot
Match: CSN3_RAT (COP9 signalosome complex subunit 3 OS=Rattus norvegicus GN=Cops3 PE=1 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.8e-74
Identity = 163/387 (42.12%), Postives = 240/387 (62.02%), Query Frame = 1


Query: 4   VEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLYILE 63
           +E  V  ++ LS+  G +++L  ++ +S ELL  + + L + L  LD  +HSLG L +L 
Sbjct: 5   LEQFVNSVRQLSAQ-GQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF 64

Query: 64  AYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQVVLL 123
              S+P S   + +    +  F+S+CN E IR A +            +C +L + +V  
Sbjct: 65  VKFSMP-SVPDFETLFSQVQLFISTCNGEHIRYATDT--------FAGLCHQLTNALVER 124

Query: 124 EAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQPRD 183
           + P+RG+  L  AI K+Q+++  LT++H +   LCLLAKC+K     LD D++++ +   
Sbjct: 125 KQPLRGIGILKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMMDICKENG 184

Query: 184 LF------LYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIY 243
            +       Y YYGGMI  GLK F +AL     A+T+P  +++ I +E+YKKYIL+SLI 
Sbjct: 185 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 244

Query: 244 NGQFSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLG 303
            G+    LPKYTS +  R +K     Y ELA  YST N  EL  +   + E F  DNN+G
Sbjct: 245 LGKVQ-QLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMG 304

Query: 304 LVKQAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQ 363
           LVKQ +SSLYK+NIQRLT+T+LTLSLQD+A+ V+L+ P+EAE +VL MI+DGEIFA+INQ
Sbjct: 305 LVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQ 364

Query: 364 KDGMVSFLEDSEQYKSCKMVEHIDSSI 385
           KDGMVSF ++ E+Y +  M+ +ID  +
Sbjct: 365 KDGMVSFHDNPEKYNNPAMLHNIDQEM 380

[Close]

BLAST of Cp4.1LG01g25670 vs. TrEMBL
Match: A0A0A0KBF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G008050 PE=4 SV=1)

HSP 1 Score: 683.3 bits (1762), Expect = 1.8e-193
Identity = 361/432 (83.56%), Postives = 381/432 (88.19%), Query Frame = 1


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLY 60
           MGTVEVLVAQIQGLSSTAGDISRLHT+LKQSEELLH++T+ LPSALAQLDASKHSLGYLY
Sbjct: 64  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 123

Query: 61  ILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQV 120
           ILEA TSVPISQEQ SS  LTISRF+S CNPEQIRLAPEK         VSVCKR KDQV
Sbjct: 124 ILEACTSVPISQEQSSSILLTISRFISCCNPEQIRLAPEK--------FVSVCKRFKDQV 183

Query: 121 VLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQ 180
           +  EAPIRGVAPLLTA+RKLQ SSEHLTT+HPEFLLLCLLAK YKTGRSILDNDILEVDQ
Sbjct: 184 IQ-EAPIRGVAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQ 243

Query: 181 PRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQ 240
           PRDLFLYCYYGGMIC+GLKLF KALELLHN VT+PM SMNAIAVEAYKKYIL+SLIYNGQ
Sbjct: 244 PRDLFLYCYYGGMICVGLKLFHKALELLHNVVTAPMQSMNAIAVEAYKKYILVSLIYNGQ 303

Query: 241 FSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLVK 300
           FS SLPKYTSSVAQRNLK FCQPYIELANSYSTGNV+ELDTVFQTNR+KFE+DNNLGLVK
Sbjct: 304 FSTSLPKYTSSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVK 363

Query: 301 QAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQKDG 360
           QAVSS+YKRNIQRLTQTYLTLSLQDIA++VKLNSPKEAEMHVL+MIQDGEIFATINQKDG
Sbjct: 364 QAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDG 423

Query: 361 MVSFLEDSEQYKSCKMVEHIDSSIQRY----------------------DAGRERQRFDY 411
           MV FLEDSEQYKSC+M+E IDSSIQR                        AGRERQRFDY
Sbjct: 424 MVRFLEDSEQYKSCRMIERIDSSIQRIMTLTKKLTAMDENISSDPLYLAKAGRERQRFDY 483

[Close]

BLAST of Cp4.1LG01g25670 vs. TrEMBL
Match: W9S8I9_9ROSA (COP9 signalosome complex subunit 3 OS=Morus notabilis GN=L484_017641 PE=4 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 6.6e-164
Identity = 316/451 (70.07%), Postives = 353/451 (78.27%), Query Frame = 1


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLY 60
           M +VE LV QIQGLSSTAGD+SRLH ILKQS++ LH ++  L  AL QLD SKHSLGYLY
Sbjct: 1   MDSVEALVTQIQGLSSTAGDVSRLHIILKQSDDSLHPESTRLFPALDQLDPSKHSLGYLY 60

Query: 61  ILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQV 120
           ILEA +S P+S+E+ SS  LTISRF+SSC  EQ+RLA EK         VSVCKRLKDQ 
Sbjct: 61  ILEACSSGPVSKERASSLVLTISRFISSCAAEQVRLATEK--------FVSVCKRLKDQA 120

Query: 121 VLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQ 180
           +LLEAP+RGVAP+LTAIRKLQ SSEHLT +HPEFLLLCLLAKCYKTG S+L +DI EVDQ
Sbjct: 121 LLLEAPMRGVAPMLTAIRKLQTSSEHLTALHPEFLLLCLLAKCYKTGLSVLHDDISEVDQ 180

Query: 181 PRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQ 240
           PRDLFLY YYGGMICIG K F KALELLHN VT+PMSS+NAIAVEAYKKYIL+SLI++GQ
Sbjct: 181 PRDLFLYSYYGGMICIGQKKFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQ 240

Query: 241 FSISLPKYTSSVAQRNLKIFC-------------------QPYIELANSYSTGNVDELDT 300
           FS +LPKYTSS AQRNLK FC                   QPYIELANSY TG V EL+ 
Sbjct: 241 FSTNLPKYTSSAAQRNLKNFCQMRIFSCVDYYGPSILFLEQPYIELANSYGTGKVTELEI 300

Query: 301 VFQTNREKFENDNNLGLVKQAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMH 360
             QTNREKFE+DNNLGLVKQ V+S+YKRNIQRLTQTYLTLSLQDIA++V+LNS KEAEMH
Sbjct: 301 YVQTNREKFESDNNLGLVKQVVASMYKRNIQRLTQTYLTLSLQDIASTVQLNSAKEAEMH 360

Query: 361 VLRMIQDGEIFATINQKDGMVSFLEDSEQYKSCKMVEHIDSSIQRY-------------- 411
           VL+MIQDGEI+ATINQKDGMV FLED EQYK+C+M+EHIDSSIQR               
Sbjct: 361 VLQMIQDGEIYATINQKDGMVRFLEDPEQYKTCEMIEHIDSSIQRIMALSRKLTAMDENI 420

[Close]

BLAST of Cp4.1LG01g25670 vs. TrEMBL
Match: B9RBM2_RICCO (26S proteasome regulatory subunit S3, putative OS=Ricinus communis GN=RCOM_1678560 PE=4 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 9.5e-163
Identity = 309/433 (71.36%), Postives = 348/433 (80.37%), Query Frame = 1


Query: 2   GTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSD--TACLPSALAQLDASKHSLGYL 61
           G++E LV QIQGLSS+A DIS LH  LKQ+++ LHSD  T  LP  L QLD S HSLGYL
Sbjct: 4   GSIESLVTQIQGLSSSATDISALHNYLKQADDSLHSDSPTRLLPF-LDQLDPSVHSLGYL 63

Query: 62  YILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQ 121
           Y LEA TS PIS+EQ  +  L ++RF++SC  +QIRLAP+K         +SVCKR KDQ
Sbjct: 64  YFLEACTSGPISKEQARTLVLILARFVTSCAADQIRLAPDK--------FISVCKRFKDQ 123

Query: 122 VVLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVD 181
           V+LLE P+RGVAPLL A+RKLQ SS HLTT+HPEFL LCLL+KCYKTG SIL++DI EVD
Sbjct: 124 VMLLEEPMRGVAPLLAAVRKLQSSSVHLTTLHPEFLQLCLLSKCYKTGLSILEDDIFEVD 183

Query: 182 QPRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNG 241
           QPRDLFLY YYGGM+CIG K F KALELLHN VT+PMSS+NAIAVEAYKKYIL SLI+ G
Sbjct: 184 QPRDLFLYSYYGGMVCIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILASLIHQG 243

Query: 242 QFSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLV 301
           QFS SLPKY SS AQRNLK FCQPYIELANSYSTG + EL+T  QTNREKFE+DNNLGLV
Sbjct: 244 QFSTSLPKYASSAAQRNLKNFCQPYIELANSYSTGKIAELETYVQTNREKFESDNNLGLV 303

Query: 302 KQAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQKD 361
           KQ VSS+YKRNIQRLTQTYLTLSLQDIAN+V+LNSPKEAEMHVL+MIQDGEI+ATINQKD
Sbjct: 304 KQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKD 363

Query: 362 GMVSFLEDSEQYKSCKMVEHIDSSIQRY----------------------DAGRERQRFD 411
           GMV FLED EQYK+C+M+EHIDSSIQR                        AGRERQRFD
Sbjct: 364 GMVRFLEDPEQYKTCEMIEHIDSSIQRIMNLSKKLTAMDELMSCDPLYLAKAGRERQRFD 423

[Close]

BLAST of Cp4.1LG01g25670 vs. TrEMBL
Match: M5WTT1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006197mg PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 6.2e-162
Identity = 305/432 (70.60%), Postives = 349/432 (80.79%), Query Frame = 1


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLY 60
           M  ++ LVA IQGLSS AGDIS LH +LKQ+ + L++++  L   L QLD SKHSLGYLY
Sbjct: 1   MDALQALVANIQGLSS-AGDISHLHVVLKQAPDSLYAESTRLLPVLDQLDPSKHSLGYLY 60

Query: 61  ILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQV 120
           ILEA +S  IS+EQ S+  L I+ F++SC+ EQIRLAP+K         +SVCKR KDQV
Sbjct: 61  ILEACSSGSISKEQGSALVLPIATFINSCDTEQIRLAPDK--------FLSVCKRFKDQV 120

Query: 121 VLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQ 180
            +LE P+RGVAP+LTAIRK+Q SSEHLT++HPEFLLLCLL+KCYK G SIL +DI EVDQ
Sbjct: 121 TVLEEPLRGVAPMLTAIRKIQTSSEHLTSLHPEFLLLCLLSKCYKAGLSILGDDIFEVDQ 180

Query: 181 PRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQ 240
           PRDLFLYCYYGGMICIG K F KALELLHN VT+PM+ +NAIAVEAYKKYIL SLI++GQ
Sbjct: 181 PRDLFLYCYYGGMICIGQKRFQKALELLHNVVTAPMTVINAIAVEAYKKYILASLIHHGQ 240

Query: 241 FSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLVK 300
           FS SLPKYTSSVAQRNLK FCQPYIELANSYSTG ++EL+T  Q  +EKFENDNNLGLVK
Sbjct: 241 FSTSLPKYTSSVAQRNLKNFCQPYIELANSYSTGKIEELETCVQKYKEKFENDNNLGLVK 300

Query: 301 QAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQKDG 360
           Q +SS+YKRNIQRLTQTYLTLSLQDIANSV+LNS KEAEMHVL+MIQDGEIFATINQKDG
Sbjct: 301 QVISSMYKRNIQRLTQTYLTLSLQDIANSVQLNSAKEAEMHVLQMIQDGEIFATINQKDG 360

Query: 361 MVSFLEDSEQYKSCKMVEHIDSSIQRYDA----------------------GRERQRFDY 411
           MV FLED EQYK+C+M+EHIDSSIQR  A                      GRERQRFD+
Sbjct: 361 MVRFLEDPEQYKTCQMIEHIDSSIQRIMALSRKLTAMDENISSDALFLGKVGRERQRFDF 420

[Close]

BLAST of Cp4.1LG01g25670 vs. TrEMBL
Match: B9GJC9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s34180g PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 4.4e-160
Identity = 298/432 (68.98%), Postives = 346/432 (80.09%), Query Frame = 1


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLY 60
           M TVE LVAQIQGLSS+AGD+S L T LKQ++E LH+++  L   L QLD + HSLGYLY
Sbjct: 1   MATVESLVAQIQGLSSSAGDLSLLLTHLKQADEFLHNESTRLLPFLEQLDPTLHSLGYLY 60

Query: 61  ILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQV 120
           ILEA TS P++ +Q     L +SRFL+SC  +QIRLAPEK         ++VCK  KDQV
Sbjct: 61  ILEACTSWPVTNDQARRLVLILSRFLTSCVADQIRLAPEK--------FIAVCKSFKDQV 120

Query: 121 VLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQ 180
           ++LEAPIRGV PLL A++KL+ SSEHLTT+HP+FL LCLLAKCYKTG SIL++DI EVDQ
Sbjct: 121 LMLEAPIRGVVPLLEAVKKLR-SSEHLTTLHPDFLQLCLLAKCYKTGLSILEDDIFEVDQ 180

Query: 181 PRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQ 240
           PRD +LYCYYGGMICIG K F KALELLHN VT+PMSS+NAIAVEA+KKY+L+SLIYNGQ
Sbjct: 181 PRDFYLYCYYGGMICIGQKRFQKALELLHNVVTAPMSSINAIAVEAFKKYVLVSLIYNGQ 240

Query: 241 FSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLVK 300
           FS SLPKYTSS AQRNLK  CQPYIELAN+YS G + EL+   QTNREKF++DNNLGLVK
Sbjct: 241 FSTSLPKYTSSAAQRNLKTICQPYIELANTYSIGKISELEPYIQTNREKFDSDNNLGLVK 300

Query: 301 QAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQKDG 360
           Q V+S+YKRNIQRLTQTYLTLSLQDIAN+V+L+SPKEAEMHVL+MIQDGEI+ATINQ+DG
Sbjct: 301 QVVTSMYKRNIQRLTQTYLTLSLQDIANTVQLSSPKEAEMHVLQMIQDGEIYATINQRDG 360

Query: 361 MVSFLEDSEQYKSCKMVEHIDSSIQRY----------------------DAGRERQRFDY 411
           MV FLED EQYK+C+M+EHIDSSIQR                         GRERQRFD+
Sbjct: 361 MVRFLEDPEQYKTCEMIEHIDSSIQRIMTLSKKLTAMDELISCDPLYLAKVGRERQRFDF 420

[Close]

BLAST of Cp4.1LG01g25670 vs. TAIR10
Match: AT5G14250.1 (AT5G14250.1 Proteasome component (PCI) domain protein)

HSP 1 Score: 454.1 bits (1167), Expect = 8.9e-128
Identity = 246/433 (56.81%), Postives = 308/433 (71.13%), Query Frame = 1


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLY 60
           + +VE ++  IQGLS +  D+S LH +L+ +++ L ++     S L QLDASKHSLGYLY
Sbjct: 5   VNSVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSLGYLY 64

Query: 61  ILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQV 120
            LE  T  P+S+E+ +     I+RF++SC+  QIRLA  K         VS+CK LKD V
Sbjct: 65  FLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYK--------FVSLCKILKDHV 124

Query: 121 VLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQ 180
           + L  P+RGV PLL A++KLQ+SS+ LT +HP+ L LCL AK YK+G SIL +DI+E+DQ
Sbjct: 125 IALGDPLRGVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQ 184

Query: 181 PRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQ 240
           PRD FLY YYGGMICIGLK F KALELL+N VT+PM  +NAIA+EAYKKYIL+SLI+NGQ
Sbjct: 185 PRDFFLYSYYGGMICIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSLIHNGQ 244

Query: 241 FSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLVK 300
           F+ +LPK  S+ AQR+ K +  PYIEL N Y+ G + EL+ +      +FE D NLGLVK
Sbjct: 245 FTNTLPKCASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKNLGLVK 304

Query: 301 QAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQKDG 360
           QAVSSLYKRNI RLTQ YLTLSLQDIAN V+L + KEAEMHVL+MIQDG+I A INQKDG
Sbjct: 305 QAVSSLYKRNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMIQDGQIHALINQKDG 364

Query: 361 MVSFLEDSEQYKSCKMVEHIDSSIQRY----------------------DAGRERQRFDY 411
           MV FLED EQYKS +M+E +DS IQR                         GRERQR+D+
Sbjct: 365 MVRFLEDPEQYKSSEMIEIMDSVIQRTIGLSKNLLAMDESLSCDPLYLGKVGRERQRYDF 424

[Close]

BLAST of Cp4.1LG01g25670 vs. TAIR10
Match: AT1G75990.1 (AT1G75990.1 PAM domain (PCI/PINT associated module) protein)

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-09
Identity = 49/191 (25.65%), Postives = 95/191 (49.74%), Query Frame = 1


Query: 187 YCYYGGMI-CIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQFSISL 246
           Y +Y G I  I L+       LL  A  +P++S+    ++  K  I++ L+        +
Sbjct: 241 YLFYLGKIRTIQLEYTDAKESLLQAARKAPVASLG-FRIQCNKWAIIVRLLLG-----EI 300

Query: 247 PKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLVKQAVSS 306
           P+  S   Q+ ++   +PY EL N+   G+++    + +   + F  D    L+ +   +
Sbjct: 301 PE-RSIFTQKGMEKTLRPYFELTNAVRIGDLELFGKIQEKFAKTFAEDRTHNLIVRLRHN 360

Query: 307 LYKRNIQRLTQTYLTLSLQDIANSVKLNSPK---EAEMHVLRMIQDGEIFATINQKDGMV 366
           + +  ++ ++ +Y  +SLQD+A  ++LNS     +AE  V + I+DG I ATI+ K+G +
Sbjct: 361 VIRTGLRNISISYSRISLQDVAQKLRLNSANPVADAESIVAKAIRDGAIDATIDHKNGCM 420

Query: 367 SFLEDSEQYKS 374
              E  + Y +
Sbjct: 421 VSKETGDIYST 424

[Close]

BLAST of Cp4.1LG01g25670 vs. TAIR10
Match: AT1G20200.1 (AT1G20200.1 PAM domain (PCI/PINT associated module) protein)

HSP 1 Score: 60.5 bits (145), Expect = 2.9e-09
Identity = 50/191 (26.18%), Postives = 95/191 (49.74%), Query Frame = 1


Query: 187 YCYYGGMI-CIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQFSISL 246
           Y +Y G I  I L+       LL  A  +P++++    ++  K  IL+ L+        +
Sbjct: 242 YLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALG-FRIQCNKWAILVRLLLG-----EI 301

Query: 247 PKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLVKQAVSS 306
           P+  S   Q+ ++   +PY EL N+   G+++   TV +   + F  D    L+ +   +
Sbjct: 302 PE-RSIFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLDTFAQDRTHNLIVRLRHN 361

Query: 307 LYKRNIQRLTQTYLTLSLQDIANSVKLNSPK---EAEMHVLRMIQDGEIFATINQKDGMV 366
           + +  ++ ++ +Y  +SL D+A  ++LNS     +AE  V + I+DG I ATI+ K+G +
Sbjct: 362 VIRTGLRNISISYSRISLPDVAKKLRLNSENPVADAESIVAKAIRDGAIDATIDHKNGCM 421

Query: 367 SFLEDSEQYKS 374
              E  + Y +
Sbjct: 422 VSKETGDIYST 425

[Close]

BLAST of Cp4.1LG01g25670 vs. NCBI nr
Match: gi|659081510|ref|XP_008441368.1| (PREDICTED: COP9 signalosome complex subunit 3 [Cucumis melo])

HSP 1 Score: 688.0 bits (1774), Expect = 1.0e-194
Identity = 363/432 (84.03%), Postives = 383/432 (88.66%), Query Frame = 1


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLY 60
           MGTVEVLVAQIQGLS+TAGDISRLHT+LKQSEELLH++T+ LPSALAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSTTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 60

Query: 61  ILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQV 120
           ILEA TSVPISQEQ SS  LTISRF+SSCNPEQIRLAPEK         VSVCKR KDQV
Sbjct: 61  ILEACTSVPISQEQSSSILLTISRFISSCNPEQIRLAPEK--------FVSVCKRFKDQV 120

Query: 121 VLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQ 180
           +  EAPIRGVAPLLTA+RKLQ SSEHLTT+HPEFLLLCLLAK YKTGRSILDNDILEVDQ
Sbjct: 121 IQ-EAPIRGVAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQ 180

Query: 181 PRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQ 240
           PRDLFLYCYYGGMICIGLKLF KALELLHN VT+PM SMNAIAVEAYKKYIL+SLIYNGQ
Sbjct: 181 PRDLFLYCYYGGMICIGLKLFQKALELLHNVVTAPMQSMNAIAVEAYKKYILVSLIYNGQ 240

Query: 241 FSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLVK 300
           FS SLPKYTSSVAQRNLK FCQPYIELANSYSTGNV+ELDTVFQTNR+KFE+DNNLGLVK
Sbjct: 241 FSTSLPKYTSSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVK 300

Query: 301 QAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQKDG 360
           QAVSS+YKRNIQRLTQTYLTLSLQDIA++VKLNSPKEAEMHVL+MIQDGEIFATINQKDG
Sbjct: 301 QAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDG 360

Query: 361 MVSFLEDSEQYKSCKMVEHIDSSIQRY----------------------DAGRERQRFDY 411
           MV FLEDSEQYKSC+M+EHIDSSIQR                        AGRERQRFDY
Sbjct: 361 MVRFLEDSEQYKSCRMIEHIDSSIQRIMTLSKKLTAMDENISSDPLYLAKAGRERQRFDY 420

[Close]

BLAST of Cp4.1LG01g25670 vs. NCBI nr
Match: gi|449441398|ref|XP_004138469.1| (PREDICTED: COP9 signalosome complex subunit 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 683.3 bits (1762), Expect = 2.6e-193
Identity = 361/432 (83.56%), Postives = 381/432 (88.19%), Query Frame = 1


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLY 60
           MGTVEVLVAQIQGLSSTAGDISRLHT+LKQSEELLH++T+ LPSALAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 60

Query: 61  ILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQV 120
           ILEA TSVPISQEQ SS  LTISRF+S CNPEQIRLAPEK         VSVCKR KDQV
Sbjct: 61  ILEACTSVPISQEQSSSILLTISRFISCCNPEQIRLAPEK--------FVSVCKRFKDQV 120

Query: 121 VLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQ 180
           +  EAPIRGVAPLLTA+RKLQ SSEHLTT+HPEFLLLCLLAK YKTGRSILDNDILEVDQ
Sbjct: 121 IQ-EAPIRGVAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQ 180

Query: 181 PRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQ 240
           PRDLFLYCYYGGMIC+GLKLF KALELLHN VT+PM SMNAIAVEAYKKYIL+SLIYNGQ
Sbjct: 181 PRDLFLYCYYGGMICVGLKLFHKALELLHNVVTAPMQSMNAIAVEAYKKYILVSLIYNGQ 240

Query: 241 FSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLVK 300
           FS SLPKYTSSVAQRNLK FCQPYIELANSYSTGNV+ELDTVFQTNR+KFE+DNNLGLVK
Sbjct: 241 FSTSLPKYTSSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVK 300

Query: 301 QAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQKDG 360
           QAVSS+YKRNIQRLTQTYLTLSLQDIA++VKLNSPKEAEMHVL+MIQDGEIFATINQKDG
Sbjct: 301 QAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDG 360

Query: 361 MVSFLEDSEQYKSCKMVEHIDSSIQRY----------------------DAGRERQRFDY 411
           MV FLEDSEQYKSC+M+E IDSSIQR                        AGRERQRFDY
Sbjct: 361 MVRFLEDSEQYKSCRMIERIDSSIQRIMTLTKKLTAMDENISSDPLYLAKAGRERQRFDY 420

[Close]

BLAST of Cp4.1LG01g25670 vs. NCBI nr
Match: gi|700190518|gb|KGN45722.1| (hypothetical protein Csa_6G008050 [Cucumis sativus])

HSP 1 Score: 683.3 bits (1762), Expect = 2.6e-193
Identity = 361/432 (83.56%), Postives = 381/432 (88.19%), Query Frame = 1


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLY 60
           MGTVEVLVAQIQGLSSTAGDISRLHT+LKQSEELLH++T+ LPSALAQLDASKHSLGYLY
Sbjct: 64  MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 123

Query: 61  ILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQV 120
           ILEA TSVPISQEQ SS  LTISRF+S CNPEQIRLAPEK         VSVCKR KDQV
Sbjct: 124 ILEACTSVPISQEQSSSILLTISRFISCCNPEQIRLAPEK--------FVSVCKRFKDQV 183

Query: 121 VLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQ 180
           +  EAPIRGVAPLLTA+RKLQ SSEHLTT+HPEFLLLCLLAK YKTGRSILDNDILEVDQ
Sbjct: 184 IQ-EAPIRGVAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQ 243

Query: 181 PRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQ 240
           PRDLFLYCYYGGMIC+GLKLF KALELLHN VT+PM SMNAIAVEAYKKYIL+SLIYNGQ
Sbjct: 244 PRDLFLYCYYGGMICVGLKLFHKALELLHNVVTAPMQSMNAIAVEAYKKYILVSLIYNGQ 303

Query: 241 FSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLVK 300
           FS SLPKYTSSVAQRNLK FCQPYIELANSYSTGNV+ELDTVFQTNR+KFE+DNNLGLVK
Sbjct: 304 FSTSLPKYTSSVAQRNLKNFCQPYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVK 363

Query: 301 QAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQKDG 360
           QAVSS+YKRNIQRLTQTYLTLSLQDIA++VKLNSPKEAEMHVL+MIQDGEIFATINQKDG
Sbjct: 364 QAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDG 423

Query: 361 MVSFLEDSEQYKSCKMVEHIDSSIQRY----------------------DAGRERQRFDY 411
           MV FLEDSEQYKSC+M+E IDSSIQR                        AGRERQRFDY
Sbjct: 424 MVRFLEDSEQYKSCRMIERIDSSIQRIMTLTKKLTAMDENISSDPLYLAKAGRERQRFDY 483

[Close]

BLAST of Cp4.1LG01g25670 vs. NCBI nr
Match: gi|778709302|ref|XP_011656382.1| (PREDICTED: COP9 signalosome complex subunit 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 632.1 bits (1629), Expect = 6.8e-178
Identity = 341/432 (78.94%), Postives = 361/432 (83.56%), Query Frame = 1


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLY 60
           MGTVEVLVAQIQGLSSTAGDISRLHT+LKQSEELLH++T+ LPSALAQLDASKHSLGYLY
Sbjct: 1   MGTVEVLVAQIQGLSSTAGDISRLHTLLKQSEELLHAETSRLPSALAQLDASKHSLGYLY 60

Query: 61  ILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQV 120
           ILEA TSVPISQEQ SS  LTISRF+S CNPEQIRLAPEK         VSVCKR KDQV
Sbjct: 61  ILEACTSVPISQEQSSSILLTISRFISCCNPEQIRLAPEK--------FVSVCKRFKDQV 120

Query: 121 VLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQ 180
           +  EAPIRGVAPLLTA+RKLQ SSEHLTT+HPEFLLLCLLAK YKTGRSILDNDILEVDQ
Sbjct: 121 IQ-EAPIRGVAPLLTAVRKLQTSSEHLTTLHPEFLLLCLLAKSYKTGRSILDNDILEVDQ 180

Query: 181 PRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQ 240
           PRDLFLYCYYGGMIC+GLKLF KALELLHN VT+PM SMNAIAVEAYKKYIL+SLIYNGQ
Sbjct: 181 PRDLFLYCYYGGMICVGLKLFHKALELLHNVVTAPMQSMNAIAVEAYKKYILVSLIYNGQ 240

Query: 241 FSISLPKYTSSVAQRNLKIFCQPYIELANSYSTGNVDELDTVFQTNREKFENDNNLGLVK 300
                                 PYIELANSYSTGNV+ELDTVFQTNR+KFE+DNNLGLVK
Sbjct: 241 ----------------------PYIELANSYSTGNVEELDTVFQTNRQKFESDNNLGLVK 300

Query: 301 QAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMHVLRMIQDGEIFATINQKDG 360
           QAVSS+YKRNIQRLTQTYLTLSLQDIA++VKLNSPKEAEMHVL+MIQDGEIFATINQKDG
Sbjct: 301 QAVSSMYKRNIQRLTQTYLTLSLQDIASTVKLNSPKEAEMHVLQMIQDGEIFATINQKDG 360

Query: 361 MVSFLEDSEQYKSCKMVEHIDSSIQRY----------------------DAGRERQRFDY 411
           MV FLEDSEQYKSC+M+E IDSSIQR                        AGRERQRFDY
Sbjct: 361 MVRFLEDSEQYKSCRMIERIDSSIQRIMTLTKKLTAMDENISSDPLYLAKAGRERQRFDY 401

[Close]

BLAST of Cp4.1LG01g25670 vs. NCBI nr
Match: gi|703157008|ref|XP_010111615.1| (COP9 signalosome complex subunit 3 [Morus notabilis])

HSP 1 Score: 585.1 bits (1507), Expect = 9.5e-164
Identity = 316/451 (70.07%), Postives = 353/451 (78.27%), Query Frame = 1


Query: 1   MGTVEVLVAQIQGLSSTAGDISRLHTILKQSEELLHSDTACLPSALAQLDASKHSLGYLY 60
           M +VE LV QIQGLSSTAGD+SRLH ILKQS++ LH ++  L  AL QLD SKHSLGYLY
Sbjct: 1   MDSVEALVTQIQGLSSTAGDVSRLHIILKQSDDSLHPESTRLFPALDQLDPSKHSLGYLY 60

Query: 61  ILEAYTSVPISQEQYSSTALTISRFLSSCNPEQIRLAPEKCKSFLKIDLVSVCKRLKDQV 120
           ILEA +S P+S+E+ SS  LTISRF+SSC  EQ+RLA EK         VSVCKRLKDQ 
Sbjct: 61  ILEACSSGPVSKERASSLVLTISRFISSCAAEQVRLATEK--------FVSVCKRLKDQA 120

Query: 121 VLLEAPIRGVAPLLTAIRKLQISSEHLTTIHPEFLLLCLLAKCYKTGRSILDNDILEVDQ 180
           +LLEAP+RGVAP+LTAIRKLQ SSEHLT +HPEFLLLCLLAKCYKTG S+L +DI EVDQ
Sbjct: 121 LLLEAPMRGVAPMLTAIRKLQTSSEHLTALHPEFLLLCLLAKCYKTGLSVLHDDISEVDQ 180

Query: 181 PRDLFLYCYYGGMICIGLKLFPKALELLHNAVTSPMSSMNAIAVEAYKKYILLSLIYNGQ 240
           PRDLFLY YYGGMICIG K F KALELLHN VT+PMSS+NAIAVEAYKKYIL+SLI++GQ
Sbjct: 181 PRDLFLYSYYGGMICIGQKKFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQ 240

Query: 241 FSISLPKYTSSVAQRNLKIFC-------------------QPYIELANSYSTGNVDELDT 300
           FS +LPKYTSS AQRNLK FC                   QPYIELANSY TG V EL+ 
Sbjct: 241 FSTNLPKYTSSAAQRNLKNFCQMRIFSCVDYYGPSILFLEQPYIELANSYGTGKVTELEI 300

Query: 301 VFQTNREKFENDNNLGLVKQAVSSLYKRNIQRLTQTYLTLSLQDIANSVKLNSPKEAEMH 360
             QTNREKFE+DNNLGLVKQ V+S+YKRNIQRLTQTYLTLSLQDIA++V+LNS KEAEMH
Sbjct: 301 YVQTNREKFESDNNLGLVKQVVASMYKRNIQRLTQTYLTLSLQDIASTVQLNSAKEAEMH 360

Query: 361 VLRMIQDGEIFATINQKDGMVSFLEDSEQYKSCKMVEHIDSSIQRY-------------- 411
           VL+MIQDGEI+ATINQKDGMV FLED EQYK+C+M+EHIDSSIQR               
Sbjct: 361 VLQMIQDGEIYATINQKDGMVRFLEDPEQYKTCEMIEHIDSSIQRIMALSRKLTAMDENI 420

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g25670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSN3_ARATH	1.6e-126	56.81	COP9 signalosome complex subunit 3 OS=Arabidopsis thaliana GN=CSN3 PE=1 SV=2	[more]
CSN3_PONAB	1.4e-74	42.38	COP9 signalosome complex subunit 3 OS=Pongo abelii GN=COPS3 PE=2 SV=1	[more]
CSN3_HUMAN	1.4e-74	42.38	COP9 signalosome complex subunit 3 OS=Homo sapiens GN=COPS3 PE=1 SV=3	[more]
CSN3_MACFA	1.4e-74	42.38	COP9 signalosome complex subunit 3 OS=Macaca fascicularis GN=COPS3 PE=2 SV=1	[more]
CSN3_RAT	1.8e-74	42.12	COP9 signalosome complex subunit 3 OS=Rattus norvegicus GN=Cops3 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g25670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBF0_CUCSA	1.8e-193	83.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G008050 PE=4 SV=1	[more]
W9S8I9_9ROSA	6.6e-164	70.07	COP9 signalosome complex subunit 3 OS=Morus notabilis GN=L484_017641 PE=4 SV=1	[more]
B9RBM2_RICCO	9.5e-163	71.36	26S proteasome regulatory subunit S3, putative OS=Ricinus communis GN=RCOM_16785...	[more]
M5WTT1_PRUPE	6.2e-162	70.60	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006197mg PE=4 SV=1	[more]
B9GJC9_POPTR	4.4e-160	68.98	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s34180g PE=4 SV=1	[more]

BLAST of Cp4.1LG01g25670 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G14250.1	8.9e-128	56.81	Proteasome component (PCI) domain protein	[more]
AT1G75990.1	2.2e-09	25.65	PAM domain (PCI/PINT associated module) protein	[more]
AT1G20200.1	2.9e-09	26.18	PAM domain (PCI/PINT associated module) protein	[more]

BLAST of Cp4.1LG01g25670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081510\|ref\|XP_008441368.1\|	1.0e-194	84.03	PREDICTED: COP9 signalosome complex subunit 3 [Cucumis melo]	[more]
gi\|449441398\|ref\|XP_004138469.1\|	2.6e-193	83.56	PREDICTED: COP9 signalosome complex subunit 3 isoform X1 [Cucumis sativus]	[more]
gi\|700190518\|gb\|KGN45722.1\|	2.6e-193	83.56	hypothetical protein Csa_6G008050 [Cucumis sativus]	[more]
gi\|778709302\|ref\|XP_011656382.1\|	6.8e-178	78.94	PREDICTED: COP9 signalosome complex subunit 3 isoform X2 [Cucumis sativus]	[more]
gi\|703157008\|ref\|XP_010111615.1\|	9.5e-164	70.07	COP9 signalosome complex subunit 3 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR000717	PCI_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0009845	seed germination
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0006396	RNA processing
biological_process	GO:0050826	response to freezing
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0051604	protein maturation
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010971	positive regulation of G2/M transition of mitotic cell cycle
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0019915	lipid storage
biological_process	GO:0016571	histone methylation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0000502	proteasome complex
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g25670.1	Cp4.1LG01g25670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 263..364 score: 1.3
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 297..387 score: 1.8
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	G3DSA:1.10.10.10		coord: 305..370 score: 2.6
IPR011991	Winged helix-turn-helix DNA-binding domain	unknown	SSF46785	"Winged helix" DNA-binding domain	coord: 300..372 score: 1.52
None	No IPR available	PANTHER	PTHR10758	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3	coord: 3..386 score: 2.8E
None	No IPR available	SMART	SM00753	PINT	coord: 297..387 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g25670	CmaCh04G029730	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g25670	CmoCh04G030910	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g25670	Cla006525	Watermelon (97103) v1	cpewmB457
Cp4.1LG01g25670	MELO3C008213	Melon (DHL92) v3.5.1	cpemeB398
Cp4.1LG01g25670	ClCG11G006900	Watermelon (Charleston Gray)	cpewcgB366
Cp4.1LG01g25670	Lsi03G003760	Bottle gourd (USVL1VR-Ls)	cpelsiB344
Cp4.1LG01g25670	MELO3C008213.2	Melon (DHL92) v3.6.1	cpemedB463
Cp4.1LG01g25670	Bhi04G001963	Wax gourd	cpewgoB0534

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g25670	Cucumber (Gy14) v2	cgybcpeB214
Cp4.1LG01g25670	Melon (DHL92) v3.6.1	cpemedB465
Cp4.1LG01g25670	Silver-seed gourd	carcpeB0034
Cp4.1LG01g25670	Silver-seed gourd	carcpeB1408
Cp4.1LG01g25670	Cucumber (Chinese Long) v3	cpecucB0482
Cp4.1LG01g25670	Wax gourd	cpewgoB0525
Cp4.1LG01g25670	Cucurbita pepo (Zucchini)	cpecpeB199
Cp4.1LG01g25670	Cucumber (Gy14) v1	cgycpeB0164
Cp4.1LG01g25670	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g25670	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g25670	Wild cucumber (PI 183967)	cpecpiB385
Cp4.1LG01g25670	Cucumber (Chinese Long) v2	cpecuB386
Cp4.1LG01g25670	Bottle gourd (USVL1VR-Ls)	cpelsiB339
Cp4.1LG01g25670	Watermelon (Charleston Gray)	cpewcgB355
Cp4.1LG01g25670	Watermelon (97103) v1	cpewmB461
Cp4.1LG01g25670	Melon (DHL92) v3.5.1	cpemeB400