Cp4.1LG01g25350 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTTCCTGCAACTTTTCGCGGGAATTCCTTTCCCTTGTCTCATTACAGTTCTTGCTGCTACATTCGTTTCCATCCTAGTTTGATTTCGTTTGCTGGCTTGAAGGAGCAACGGATTTCTCATCGCGGCCTTAAGCTTTATCAGTTTGCCAGGTAACTTGCTTAGTTTCGAATTGGGGGATCGTAATGCAGGGCTGTAAGCGTATTGAATTGGTTTTTTTTTTTCTACTTTTTTTGTCTTCTAACTGATAGCCGTGCAAAGCGAGGGGTTGCTTGTAGAGTTACTGAAACGCAGAATGAACCAGATGGCACTAACGATAAGGTATTTGTAATTCTGCAGTCGAATCCTTTTTCTTTTTTCTGTTGTGGTTGCTCGTTTAGTTTATTCAAGTTTTGCATAGATTCTCATTAGTTTTACAATCATAATTGCTTCGTAATCCACAATGCACTTTCCTGTTGGATTGGAGGCACTATAATCAATTTCTTTCTACCAATTTTCTATAATTTCACCTCAATGTGTAAGTTTTTTCTCCTCTTTCTGATTAGGTCCCTTTGATTCAACTTAGGGCACGTAATTTATGTTGTGGCATGAATTCTAGATTGCACAGTACTTGATGTCATGGCCAACGCTAGAACCTGGTGTCATCTTCTTAAAGTATATGCTTAATAAATCACTTACAAAATTGCGTTGGATGCTTGAAGGGGGTGTGTATTTACAATCAGAAATTGACGTTTTTCTTTTCGAGTTACACAATTACTTAATACTTCTCCCCATTCCTGTGAATGGTAACGAGTTAATGAAACTATGCCTCCATTTGTAGGAAAAAGATGGCTCTGAAGGTGGAGATCAGCCATCTCCCTCCGACTCCCTCTCAGAAGATAAAATTCAACTCGATTCTCAGGTTGTTGATGAAGTCAACAATGCTGAAAATAAGGACCAAGGTGACATCCAGGTAAGTATATTTGGCGACAAACTTTATTCCTTCGTACATCAAGAAACTGGCTTGGAAATCGATTTTTGGTTAGAAATTGTTCTTGGTAGCTACAGCCTACTGAAATAAACTTTCATGCTTTCACCCGATGATTAGTTCTACATGATGTTGATTTTGAAAAACAATTTAAATTTCACATTTTTTCTTTTCCAACTGGAGCCTGCAAGGCTTTGTTAGCATGGGGTGCTTAGTGATATGAACTCTTGTATACATTAGAATTACCGACCCTACGGCTGCATATAATCCAGTTGTAGTAATTAATATCATAGAAGGTTATATCATGATCTATGGAGAAGAATGCTTCTTTAAGTGTCATTTTTACTTGAAATTTTTCGTCTCTCCATTGTTTTTTGTTTTTTAAAATTCAACCCTGCATTGGGGGGGTGTTAAAAAATTAGTTTGTGTTCACAGTGTACTTGAAGAGTTTTTAAACTTCGAAACAGGATATTGACAATGTAGAAGTTGCTAGTGGGTCTCCACTTCCAGGACTAAAGGTACTTGTAGTGTATTGCTTTATTCTGTTTTTTTTTGGCAACAGAATGACAGGAAAATTTTCATGCTCTGTTCCTCATCTGTTATTTATTTGATAAAATTTCAAGCAGACACAACAATTGGATGAATCATTCAGGATTCCCCGAGAAACAATCGAAATTCTTAAGAATCAAGTGTTTGGATTTGATACTTTCTTTGTGACAAGCCAGGACCCATATGAGGTGAGTTGGTCATGAAAGTATTCTTTTTATTGATGGTTTGTTTTATGTATATATATATATATATATATTATATACTTTTCCTTGAGTTTTTATAATTAATATGAAAGTGGGGGTTGGGCTGTAATGGAGCAAGTTTGACTTAATTTGAAGAATAATTAATTACCTATCATTTGAATTATGTGCAGATGTCTTTATTTAAAACCTAATAATATATTTGTTGATATAATATCAATATATTTAGTCATTAGTGTTTTAAAGTGTATAATGATAATTAAGACCTATATTTATGTAAAAGTGATTCAAAACAATTTTAAAATTTTATGTTATCATTTTTGAAACAAAATAGTTATCTAATATAAAAGAAATCATTAGTAAGCTATAGTAGGCAACATATTTTCCAGTGTGCCAATTATAGCATACCTAGCTTGAACATTTATGAAAGTTTTCTAAATAATGATATTAAAATAATTTTTTGCACGTGAAAATTCTATAAACAAACTTAACCTCTAGAAAAAGTTGTTGACAATATCCTGTGTGTCATTACATGTGAAAAACTAAAAGAAGGAATGTTTGAAACTACCTAATATAGAGAGTAGACAAAATGACCCGATGGCCGGATATGATTGTCCTTGCCTTTTGATATATAAACTTTGTTAATAGTTTTTTTGTTACTTCCACTAGGGTGGAGTGTTGTTTAAAGGAAATCTGCGAGGAGAGGCTGCTAAGAGCTATGAAAAGATAACAAAGAGAATGCAGGTATCTCTGTCTGCATTTGTTGTTTTTCGCTGATTTTTAAATGTTCCTAAGTCATTAATTGCTTACGTAATATTTTGGGAACTATACAGGATAACTTTGGGGATGTATATAAGCTTTTTCTTTTAATTAATCCAGAGGATGATAAACCTGTAGCTGTTGTTATTCCAAGAAAGACCTTACAACCAGAGACAACAGGTAAACATTTGGTTTGTGATTGATGCTATTTACCCTTGTGGGAGTTGAATAATCGAGAGAATGATGATGTTTACATTAAAGTTAAAAATTGCAGCTGTCCCAGAATGGTTTGCTGCCGCAGCGTTTGGACTGGTTACTGTATTTACTCTACTTCTCCGAAATGTCCCCGCATTGCAATCCAACTTACTGTATGCGATTTTTCCTTTATGTCTTATGCATGAATGGATCTTCTTTCCCTTGGTCCAATGAACAATTGAACTTTTAGTATTGTCTTCTGTTAAATAAATGAAAATTTCAGTTCTTATAAATTTTTACCATTTCTTTTTTGTGAATATGCTCTGCTTCTATTGTACAATGTTTTTTCATGTCTTTTAGAGAAAAATTATATCAACTTGTGAAGGACTTTGTTGCTGCTTCTTGACATATTGTTGCCAGTTAGCATTTGCTTTCATTTGTAAGGTACTCATTTGAATTTATTAATCTATTATTTTTTGTGGCAGATCGACTTTTGATAATCTTGACTTGCTTAAAGATGGACTATCTGGTGCCTTAGTAACTGCACTTGTTTTAGGAGTGCATGAACTCGGCCATATATTAGCTGCTGGAGATAGAGTTAAGTTTGGGATTCCATACTTTGTTCCTAGTTGGCAGGTAATATACTTTGTTCTTTGATCATAAAACGATTCACCAATATTTTGCTGTTTACGAAATGTTTTATCCAACCATACAGCAAATCAATCTTCCTGCATGAGGCAACCTTGGTTTTATTGTGCGACATGCCTTTTGTAGTATTTCTATTTTTGTCTACCATTTGTGCTTTTGCTTGAAAAGTACTGCGTTTATTAGAATATTGCCTTGTGTCAATACCCTTGATTCAACCACCCTTTCCAACTTGTTACTAGCGGATTTCAGTTGTGTTCTCTCCGTCCAACTTTTTTTGGTGGCAGATAGGCTCCTTTGGTGCAATCACACGGATCCTAAATATTGTACCCAAGCGCGAAGATCTGCTGAAGGTGGCAGTAGCAGGACCATTAGCTGGATTTTCTGTGGGCTTCCTTCTTTACATTCTAGGTTTCATCTTGCCACCTAGTGATGGCATTGGAGTTATCGTTGATTCATCTGTGTTTCATGAGNGCGAAGATCTGCTGAAGGTGGCAGTAGCAGGACCATTAGCTGGATTTTCTGTGGGCTTCCTTCTTTACATTCTAGGTTTCATCTTGCCACCTAGTGATGGCATTGGAGTTATCGTTGATTCATCTGTGTTTCATGAGTCATTTCTTGCCGGTGGCCTTGGTAATCATCTTTTCTTTTATACGTTGGATCTTTACTAG ATGGATTTTCCTGCAACTTTTCGCGGGAATTCCTTTCCCTTGTCTCATTACAGTTCTTGCTGCTACATTCGTTTCCATCCTAGTTTGATTTCGTTTGCTGGCTTGAAGGAGCAACGGATTTCTCATCGCGGCCTTAAGCTTTATCAGTTTGCCAGCCGTGCAAAGCGAGGGGTTGCTTGTAGAGTTACTGAAACGCAGAATGAACCAGATGGCACTAACGATAAGGAAAAAGATGGCTCTGAAGGTGGAGATCAGCCATCTCCCTCCGACTCCCTCTCAGAAGATAAAATTCAACTCGATTCTCAGGTTGTTGATGAAGTCAACAATGCTGAAAATAAGGACCAAGGTGACATCCAGGATATTGACAATGTAGAAGTTGCTAGTGGGTCTCCACTTCCAGGACTAAAGGGTGGAGTGTTGTTTAAAGGAAATCTGCGAGGAGAGGCTGCTAAGAGCTATGAAAAGATAACAAAGAGAATGCAGGATAACTTTGGGGATGTATATAAGCTTTTTCTTTTAATTAATCCAGAGGATGATAAACCTGTAGCTGTTGTTATTCCAAGAAAGACCTTACAACCAGAGACAACAGCTGTCCCAGAATGGTTTGCTGCCGCAGCGTTTGGACTGGTTACTGTATTTACTCTACTTCTCCGAAATGTCCCCGCATTGCAATCCAACTTACTATCGACTTTTGATAATCTTGACTTGCTTAAAGATGGACTATCTGGTGCCTTAGTAACTGCACTTGTTTTAGGAGTGCATGAACTCGGCCATATATTAGCTGCTGGAGATAGAGTTAAGTTTGGGATTCCATACTTTGTTCCTAGTTGGCAGATAGGCTCCTTTGGTGCAATCACACGGATCCTAAATATTGTACCCAAGCGCGAAGATCTGCTGAAGGTGGCAGTAGCAGGACCATTAGCTGGATTTTCTGTGGGCTTCCTTCTTTACATTCTAGGTTTCATCTTGCCACCTAGTGATGGCATTGGAGTTATCGTTGATTCATCTGTGTTTCATGAGNGCGAAGATCTGCTGAAGGTGGCAGTAGCAGGACCATTAGCTGGATTTTCTGTGGGCTTCCTTCTTTACATTCTAGGTTTCATCTTGCCACCTAGTGATGGCATTGGAGTTATCGTTGATTCATCTGTGTTTCATGAGTCATTTCTTGCCGGTGGCCTTGGTAATCATCTTTTCTTTTATACGTTGGATCTTTACTAG ATGGATTTTCCTGCAACTTTTCGCGGGAATTCCTTTCCCTTGTCTCATTACAGTTCTTGCTGCTACATTCGTTTCCATCCTAGTTTGATTTCGTTTGCTGGCTTGAAGGAGCAACGGATTTCTCATCGCGGCCTTAAGCTTTATCAGTTTGCCAGCCGTGCAAAGCGAGGGGTTGCTTGTAGAGTTACTGAAACGCAGAATGAACCAGATGGCACTAACGATAAGGAAAAAGATGGCTCTGAAGGTGGAGATCAGCCATCTCCCTCCGACTCCCTCTCAGAAGATAAAATTCAACTCGATTCTCAGGTTGTTGATGAAGTCAACAATGCTGAAAATAAGGACCAAGGTGACATCCAGGATATTGACAATGTAGAAGTTGCTAGTGGGTCTCCACTTCCAGGACTAAAGGGTGGAGTGTTGTTTAAAGGAAATCTGCGAGGAGAGGCTGCTAAGAGCTATGAAAAGATAACAAAGAGAATGCAGGATAACTTTGGGGATGTATATAAGCTTTTTCTTTTAATTAATCCAGAGGATGATAAACCTGTAGCTGTTGTTATTCCAAGAAAGACCTTACAACCAGAGACAACAGCTGTCCCAGAATGGTTTGCTGCCGCAGCGTTTGGACTGGTTACTGTATTTACTCTACTTCTCCGAAATGTCCCCGCATTGCAATCCAACTTACTATCGACTTTTGATAATCTTGACTTGCTTAAAGATGGACTATCTGGTGCCTTAGTAACTGCACTTGTTTTAGGAGTGCATGAACTCGGCCATATATTAGCTGCTGGAGATAGAGTTAAGTTTGGGATTCCATACTTTGTTCCTAGTTGGCAGATAGGCTCCTTTGGTGCAATCACACGGATCCTAAATATTGTACCCAAGCGCGAAGATCTGCTGAAGGTGGCAGTAGCAGGACCATTAGCTGGATTTTCTGTGGGCTTCCTTCTTTACATTCTAGGTTTCATCTTGCCACCTAGTGATGGCATTGGAGTTATCGTTGATTCATCTGTGTTTCATGAGNGCGAAGATCTGCTGAAGGTGGCAGTAGCAGGACCATTAGCTGGATTTTCTGTGGGCTTCCTTCTTTACATTCTAGGTTTCATCTTGCCACCTAGTGATGGCATTGGAGTTATCGTTGATTCATCTGTGTTTCATGAGTCATTTCTTGCCGGTGGCCTTGGTAATCATCTTTTCTTTTATACGTTGGATCTTTACTAG MDFPATFRGNSFPLSHYSSCCYIRFHPSLISFAGLKEQRISHRGLKLYQFASRAKRGVACRVTETQNEPDGTNDKEKDGSEGGDQPSPSDSLSEDKIQLDSQVVDEVNNAENKDQGDIQDIDNVEVASGSPLPGLKGGVLFKGNLRGEAAKSYEKITKRMQDNFGDVYKLFLLINPEDDKPVAVVIPRKTLQPETTAVPEWFAAAAFGLVTVFTLLLRNVPALQSNLLSTFDNLDLLKDGLSGALVTALVLGVHELGHILAAGDRVKFGIPYFVPSWQIGSFGAITRILNIVPKREDLLKVAVAGPLAGFSVGFLLYILGFILPPSDGIGVIVDSSVFHEXEDLLKVAVAGPLAGFSVGFLLYILGFILPPSDGIGVIVDSSVFHESFLAGGLGNHLFFYTLDLY
BLAST of Cp4.1LG01g25350 vs. Swiss-Prot
Match: EGY2_ORYSI (Probable zinc metalloprotease EGY2, chloroplastic OS=Oryza sativa subsp. indica GN=EGY2 PE=3 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 5.8e-89 Identity = 174/264 (65.91%), Postives = 207/264 (78.41%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. Swiss-Prot
Match: EGY2_ORYSJ (Probable zinc metalloprotease EGY2, chloroplastic OS=Oryza sativa subsp. japonica GN=EGY2 PE=2 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 5.8e-89 Identity = 174/264 (65.91%), Postives = 207/264 (78.41%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. Swiss-Prot
Match: EGY2_ARATH (Probable zinc metalloprotease EGY2, chloroplastic OS=Arabidopsis thaliana GN=EGY2 PE=2 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.7e-88 Identity = 168/248 (67.74%), Postives = 199/248 (80.24%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. Swiss-Prot
Match: EGY1_ORYSJ (Probable zinc metalloprotease EGY1, chloroplastic OS=Oryza sativa subsp. japonica GN=EGY1 PE=2 SV=3) HSP 1 Score: 92.4 bits (228), Expect = 1.2e-17 Identity = 85/317 (26.81%), Postives = 154/317 (48.58%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. Swiss-Prot
Match: EGY1_ARATH (Probable zinc metalloprotease EGY1, chloroplastic OS=Arabidopsis thaliana GN=EGY1 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.7e-17 Identity = 84/292 (28.77%), Postives = 140/292 (47.95%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. TrEMBL
Match: A0A0A0KDB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G011070 PE=4 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 3.0e-108 Identity = 238/382 (62.30%), Postives = 263/382 (68.85%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. TrEMBL
Match: K3XGT6_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_000920mg PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 3.9e-100 Identity = 205/307 (66.78%), Postives = 240/307 (78.18%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. TrEMBL
Match: V4LA23_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10013357mg PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 4.8e-98 Identity = 217/384 (56.51%), Postives = 258/384 (67.19%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. TrEMBL
Match: A0A067FNS4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009542mg PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 1.2e-96 Identity = 226/426 (53.05%), Postives = 269/426 (63.15%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. TrEMBL
Match: A0A067G004_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009542mg PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 3.4e-96 Identity = 215/391 (54.99%), Postives = 257/391 (65.73%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. TAIR10
Match: AT5G05740.1 (AT5G05740.1 ethylene-dependent gravitropism-deficient and yellow-green-like 2) HSP 1 Score: 327.8 bits (839), Expect = 9.5e-90 Identity = 168/248 (67.74%), Postives = 199/248 (80.24%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. TAIR10
Match: AT5G35220.1 (AT5G35220.1 Peptidase M50 family protein) HSP 1 Score: 91.3 bits (225), Expect = 1.5e-18 Identity = 84/292 (28.77%), Postives = 140/292 (47.95%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. NCBI nr
Match: gi|778709497|ref|XP_004138568.2| (PREDICTED: probable zinc metalloprotease EGY2, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 400.2 bits (1027), Expect = 4.3e-108 Identity = 238/382 (62.30%), Postives = 263/382 (68.85%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. NCBI nr
Match: gi|731412244|ref|XP_010658292.1| (PREDICTED: probable zinc metalloprotease EGY2, chloroplastic isoform X2 [Vitis vinifera]) HSP 1 Score: 392.1 bits (1006), Expect = 1.2e-105 Identity = 227/387 (58.66%), Postives = 265/387 (68.48%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. NCBI nr
Match: gi|658000964|ref|XP_008392943.1| (PREDICTED: probable zinc metalloprotease EGY2, chloroplastic [Malus domestica]) HSP 1 Score: 382.5 bits (981), Expect = 9.2e-103 Identity = 221/382 (57.85%), Postives = 261/382 (68.32%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. NCBI nr
Match: gi|778709494|ref|XP_011656409.1| (PREDICTED: probable zinc metalloprotease EGY2, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 379.4 bits (973), Expect = 7.8e-102 Identity = 193/206 (93.69%), Postives = 199/206 (96.60%), Query Frame = 1
BLAST of Cp4.1LG01g25350 vs. NCBI nr
Match: gi|659082048|ref|XP_008441639.1| (PREDICTED: probable zinc metalloprotease EGY2, chloroplastic, partial [Cucumis melo]) HSP 1 Score: 376.7 bits (966), Expect = 5.1e-101 Identity = 219/334 (65.57%), Postives = 238/334 (71.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |