Cp4.1LG01g25330 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CGGGGTAACTTACGAATTGATGCTGCGCTGGATGCTATGAATCCTTTCGGATTTCATCCGAAGTTGGTTCGTGACACGGTCAAGGAGCTCCTCAGTGTGTGTTTTTCTGATTTCATCTCTGTTCTACATGGTTCATGTTTTTGTTTCGTTTTTGTGTGTGTTTCTTCTGTGGGTCTCTCTGTTTTCCTGTCTTAAAGTTAAGAAAGTAAGCGGATAAAATGGTCTGATGGCCACTGCCCTGAATACTTGAAAGTATGTATTTGTTTTTAGATTCCCCCATTTCAAGGTCAATTATCTGAATGCAAGTGCTTAGAAATAGGGACTCAAGAAGCTGCTGCATTGCTAAAACGTTTTGGCTTTCTTCCAATCATCGCTATACTTTGTTTTATAATCTCATACAGTGTTTGGAGAATTTGGTTTAGGTGTATGGAGGAGACGAAGGATGGGTATTCATTGAAGAAGGCTCTTATACTCTCTTGATTGATACCCTTCTCGAGAAACGGAAAGATGGTGCAATAGAGAAGGTTAGTTTCCAACTATTTTTGTTGAATTTGATTCTTGATGTAAGCACGTTCTTCGCCTTTGTATAATGGTTTATGAATGTTTAACAATTCCAACGGAGAACCATTGATGTATGTTGCATACAAATAAGAATTGAAATGTTTAGCTCCAAAAGAAACTCCGGATCAAAAATTTCAAACTAGTTCTTATTCCCAGATTGGTGTTTATGGGGTGTGCTATTTTGCTAGTCACTGTCAAATTGTTTGCAATGAGTACAACATTTGCTCGTGCATATATCGTTTTTGTTTAACTCGTACCGGGTTTACTTTTCTTATGTTGAAATAGTGTTAACTAATTATCAGAAAAATGCACACCTTTTATTCTTTCAACTGTTTTATCTCTTCAGCATTGCCCCATATTTTAATGCTCATTGTTTGAAGGTTCATGAAGAGGATGGAAGAATTGCAGATCTTCAGGAGACCTCTGAAGCGGGCTGTTCCTCGAATGTTGTTAATGAAGCTTCCACATCTAATCCTGGGGCTGAGATTACCGTGAAACCGACTGAGGGTGTAATCTCATCGTACGTGGACAATGAACCTTTCAGGATCACAGCCACAGTACCTGCAAATGATTCAGGTAACTAGTTTGACATTTCAAACCAAACTTATGGATTTTCGCCGTTCTATAACTACCATTTTATCGGTTACTTTAATCGTAATTTCATGAGGTTATATTCGTAAAGGCCTTAAACTTGTAACCTTGTTTTAGATACATTCTCTTCTAGGCCGAACTAACACCCAACCAGCTAAACATTTAGATTATTACAAATGTGCAAAATAAACGGATTTAGGAGGTCAAGAAAGTCTATGCTCTAATGGATAACAGTAGCAGCTTTTTAAAGGCAATAATTGATTTCAATTGGTTACTTGGGAAAGAAACTATGAGTTGATCTTGTGTGTGATTTCACTGCCATTGTTGATTTATCATGGTGAAGGACCCTGAAGAATATTATTATGTGTGATGAATCTGCAGATGAAAGATACTGGAAGGAGGAGGATATAGGTTCTGGTGTTGCTGATAACCATTTTATAAGGAGTTCTATGAACCAGTCTTTACTGGCGGCACATACCCCGAAAATAAGGAGGCGAAAACCTTATCACGGGTGGATCTCCTCCAGTGGCGACGACAGGGAAGACTTGGTGCACTTGACACCAGCTCAATTGCCTGAGGAGTTTGCCAGGTTACTCATTCCTCATGCTCAAAGAAAAAGAAAGAATCGTTGGGATGTGAAGCCTTCAGAATCATGA CGGGGTAACTTACGAATTGATGCTGCGCTGGATGCTATGAATCCTTTCGGATTTCATCCGAAGTTGGTTCGTGACACGGTCAAGGAGCTCCTCAGTGTGTATGGAGGAGACGAAGGATGGGTATTCATTGAAGAAGGCTCTTATACTCTCTTGATTGATACCCTTCTCGAGAAACGGAAAGATGGTGCAATAGAGAAGGTTCATGAAGAGGATGGAAGAATTGCAGATCTTCAGGAGACCTCTGAAGCGGGCTGTTCCTCGAATGTTGTTAATGAAGCTTCCACATCTAATCCTGGGGCTGAGATTACCGTGAAACCGACTGAGGGTGTAATCTCATCGACCCTGAAGAATATTATTATGTGTGATGAATCTGCAGATGAAAGATACTGGAAGGAGGAGGATATAGGTTCTGGTGTTGCTGATAACCATTTTATAAGGAGTTCTATGAACCAGTCTTTACTGGCGGCACATACCCCGAAAATAAGGAGGCGAAAACCTTATCACGGGTGGATCTCCTCCAGTGGCGACGACAGGGAAGACTTGGTGCACTTGACACCAGCTCAATTGCCTGAGGAGTTTGCCAGGTTACTCATTCCTCATGCTCAAAGAAAAAGAAAGAATCGTTGGGATGTGAAGCCTTCAGAATCATGA CGGGGTAACTTACGAATTGATGCTGCGCTGGATGCTATGAATCCTTTCGGATTTCATCCGAAGTTGGTTCGTGACACGGTCAAGGAGCTCCTCAGTGTGTATGGAGGAGACGAAGGATGGGTATTCATTGAAGAAGGCTCTTATACTCTCTTGATTGATACCCTTCTCGAGAAACGGAAAGATGGTGCAATAGAGAAGGTTCATGAAGAGGATGGAAGAATTGCAGATCTTCAGGAGACCTCTGAAGCGGGCTGTTCCTCGAATGTTGTTAATGAAGCTTCCACATCTAATCCTGGGGCTGAGATTACCGTGAAACCGACTGAGGGTGTAATCTCATCGACCCTGAAGAATATTATTATGTGTGATGAATCTGCAGATGAAAGATACTGGAAGGAGGAGGATATAGGTTCTGGTGTTGCTGATAACCATTTTATAAGGAGTTCTATGAACCAGTCTTTACTGGCGGCACATACCCCGAAAATAAGGAGGCGAAAACCTTATCACGGGTGGATCTCCTCCAGTGGCGACGACAGGGAAGACTTGGTGCACTTGACACCAGCTCAATTGCCTGAGGAGTTTGCCAGGTTACTCATTCCTCATGCTCAAAGAAAAAGAAAGAATCGTTGGGATGTGAAGCCTTCAGAATCATGA RGNLRIDAALDAMNPFGFHPKLVRDTVKELLSVYGGDEGWVFIEEGSYTLLIDTLLEKRKDGAIEKVHEEDGRIADLQETSEAGCSSNVVNEASTSNPGAEITVKPTEGVISSTLKNIIMCDESADERYWKEEDIGSGVADNHFIRSSMNQSLLAAHTPKIRRRKPYHGWISSSGDDREDLVHLTPAQLPEEFARLLIPHAQRKRKNRWDVKPSES
BLAST of Cp4.1LG01g25330 vs. TrEMBL
Match: A0A0A0K7Q2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G011060 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 2.8e-52 Identity = 124/216 (57.41%), Postives = 146/216 (67.59%), Query Frame = 1
BLAST of Cp4.1LG01g25330 vs. TrEMBL
Match: G7KGX8_MEDTR (Ubiquitin-binding WIYLD domain protein OS=Medicago truncatula GN=MTR_5g082250 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 5.4e-24 Identity = 82/223 (36.77%), Postives = 121/223 (54.26%), Query Frame = 1
BLAST of Cp4.1LG01g25330 vs. TrEMBL
Match: A0A067LC66_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01303 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 7.8e-23 Identity = 84/257 (32.68%), Postives = 126/257 (49.03%), Query Frame = 1
BLAST of Cp4.1LG01g25330 vs. TrEMBL
Match: A0A067L8T6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01302 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.6e-20 Identity = 82/236 (34.75%), Postives = 118/236 (50.00%), Query Frame = 1
BLAST of Cp4.1LG01g25330 vs. TrEMBL
Match: A0A0S3RKK7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G079300 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.8e-20 Identity = 83/250 (33.20%), Postives = 125/250 (50.00%), Query Frame = 1
BLAST of Cp4.1LG01g25330 vs. TAIR10
Match: AT2G40020.3 (AT2G40020.3 Nucleolar histone methyltransferase-related protein) HSP 1 Score: 55.8 bits (133), Expect = 3.7e-08 Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = 1
BLAST of Cp4.1LG01g25330 vs. NCBI nr
Match: gi|659081659|ref|XP_008441447.1| (PREDICTED: uncharacterized protein LOC103485563 isoform X1 [Cucumis melo]) HSP 1 Score: 216.1 bits (549), Expect = 6.1e-53 Identity = 126/216 (58.33%), Postives = 149/216 (68.98%), Query Frame = 1
BLAST of Cp4.1LG01g25330 vs. NCBI nr
Match: gi|449441598|ref|XP_004138569.1| (PREDICTED: uncharacterized protein LOC101218050 [Cucumis sativus]) HSP 1 Score: 213.4 bits (542), Expect = 4.0e-52 Identity = 124/216 (57.41%), Postives = 146/216 (67.59%), Query Frame = 1
BLAST of Cp4.1LG01g25330 vs. NCBI nr
Match: gi|659081663|ref|XP_008441449.1| (PREDICTED: uncharacterized protein LOC103485563 isoform X2 [Cucumis melo]) HSP 1 Score: 193.7 bits (491), Expect = 3.2e-46 Identity = 114/201 (56.72%), Postives = 137/201 (68.16%), Query Frame = 1
BLAST of Cp4.1LG01g25330 vs. NCBI nr
Match: gi|659081665|ref|XP_008441450.1| (PREDICTED: uncharacterized protein LOC103485563 isoform X3 [Cucumis melo]) HSP 1 Score: 193.7 bits (491), Expect = 3.2e-46 Identity = 114/201 (56.72%), Postives = 137/201 (68.16%), Query Frame = 1
BLAST of Cp4.1LG01g25330 vs. NCBI nr
Match: gi|1000950748|ref|XP_015579474.1| (PREDICTED: uncharacterized protein LOC8270459 [Ricinus communis]) HSP 1 Score: 133.3 bits (334), Expect = 5.2e-28 Identity = 88/250 (35.20%), Postives = 130/250 (52.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |