Cp4.1LG01g24770 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCCCAGTCCAGTTCAGCCCATCACGTTTCATCATTCACTGTCTATATCCTTCTGTACGGAGCTTCATGAAGTCGCGGCAATGGAAGAAGAGGCGGGAATTTAGGCAGAACGAGACGATGGCAGACGAGACCTTGGTTGAAGCGGCGCTTCGAGTCCTCAACACTTCCGATCCCTTCGAGAAGGCCGAACTCGGCGACAAGGTAGCTTCTCGATGGCTCAACGGCGTGATTTCTCGCCCTTACGATCCCTCCTCCGATCTCGCCGTCCCCGACCGCCCCGCCAGGCTCTCTGATGTAACAATCCACTTCATTCCTCATCTCTTCGTGTATATATGTATGTTGATTGTAATGGTGTAAGGTTTGAAGAATCTCTGCGTTGAAGTGGTTTCTGAAATGGTTCAGGTGAAGTTGGTGTCGCCGAGTCTCATGCCGAAGCTTGGGAAGGCGGGAAGCTTACAGAGCCGGCAGGCTATTGTGCATAGTCTTGTCCACACTGAAAGTTGGGCAATCGATTTGTCGTGGGTACATTGTCTCTTTATTTTCAATTACGATTTATCTTGAATCAGTGAATTGTAGGTTTTAATTAAATTCTATTGTTATTTTATGTTTCTCTGTTCGATTTTGGAGGCTTTAGTAAACCCTAAGCTCTTTTTGTTCATTTCTTATTCTCTCCCTCTGAATTGTTAGAGAATCCGTTCTTTCTCGAATGTTGTTATCGATTCTCTTTCGCCCATCTAAGAGTTGAAATGATACTTAATTCGGTATTTCTATGTGTGGCTGTTTTTAGTCTCGTTTGGCGTTCCCCTTGGTCAATTTTTTATTCTATAGCTCCCCTATTTGGCATTCCCCTTGGGTACGTTGGATCCATTTTATCTATGTTCGTTAATTCACTCACTAATATTAAGAAAAAAACAATATAAAAATATGTATAATATCATTAATTTCAATAAAATTGAGGGTTTACATAAAATTAAGTAGATCAAAGAAATATAAGTTCTAATGTGACATTTTTGAAAAGTTGCTCCATACATATGCTTTTAATTGAACACGTATTAGTATACATTTTGTAATGATCTTTTGACCAAAAACTTATTAGATGGTAAAAATTTCAATGATGCATAAGATTTGGGTTAAGATTACAACACTTTATANGTTTTTGAAAATTTGCTCCATACATATGCTTTTAATTGAACACGTATTAGTATACATTTTGTAATGATCTTTTGACCAAAAACTTATTAGATGGTAAAAATTTCAATGATGCATAAGATTTGGGTTAAGATTACAACACTTTATAAAGTTTATGGTGTAGTTTGAGAAACTGACAGGTAAAATTTGATATGGAAATTGATTTTTGCCCCGGTAATTATTGTACTTGTGCATACTTTTGCTTGGCCCTTGTATTATGAGTCTTTGAATATTTTATGGCTGCCTGATATTCTCTTGCTCTTCCCCACGATGGAAAATTTACGCCTAATTGCCTTTAGGGAGTGACTGGTAATTGCAAGAAACAATATCCATTGAGTTCATCAACAATTGGGTGGAAAACCTCTAACTTGAAGTTAAGAGTATACTGTAACTAGTTGAGTTATGCTTGGGTAGTCAAATTGTCTTCTTATCGCTTGATGCATATTTAATTTTTGCAAGAACTACTAGTTTTATATAATTTTTGCGGTATCTTTTAGTTCTTCATGGATTAGACGATTTCCTTGCAAACATCCATTTCTGGGACACTAACATTAACTTCTACTAGTTCTTCACCTATCTGTTCATGGATCCATCAAGTTATTTTTTCTTGCAGTGTTGACTCGGCTAAATTTTAACGTTTTAATACTCTGTAGGACATAATAGCTCGTTTTGGGAAACAAGAAGAGATGCCAAGAGAATTCTTCACTGATTTTGTTAGGGTAGCCCAAGACGAAGGTAGACATTTTACTCTTCTTGCTGCACGACTTAAGGAACTGGGCTCTTTCTATGGAGCACTACCCGCTCACGACGGCCTTTGGGATTCTGCTATTGCTACTTCCAAGGATTTATTAGCACGCTTGGCTATTGAGCATTGCGTCCATGAGGTGCGTTCATAATTTATTTAGTTGATTATATGGAGTTAACGAGAATGAGCTTCATCAAGTGTTTGCTAGTGATGAGGATATAGATTAAGTTCCATTTCTCTTCAATTAACAAGATTTCTACGTCAATCAATATATAACATCTGGTGTGATAGAATTGAGGTTGAAATTTTATTTACATGCTTTCTACTTCCACACATGTGATGATTTTTTCATTATAGTTTTCGTTTTATTTAATTATCCCACCTTGTTTATAAAGTTGTCCTTTTTATCTATTTTCTAATTTGATGGTAGAATTAGCAAAAGAGGTTAAGAAATGTCTACAACATGGAAATCTATCAGGCCAGCACTAAATTACTATATACATCTTTATGTGAAAGTAAAATATTTTCCAGCCTGGAAATGAAATAAAATTGAACAAAATTTGATATTTGGGGGACTAAAATAATGTTCAAACAACCTAACCAACTTATTATATTCATTCATTTGTATAGATTTATTTTGATGATGATTGATTAAATATGAGCAAGTGTTCGTCCCTAATAGACCTTTAAAGTGTATTTATGGAAGGAACACTAAAAAATCTGTTTGAAGAAAGTGTTACTAGGGAAATATCTCATCTCTTGCAAGCCTATAATTTTGAAGCTCTTAGAACTGTACATTTATATATAGTACCGAAAATGTTATGTGATATTTTGATAAAATCCGTTCTTGAATAAATTGTATGAACAGGCTAGAGGGCTGGATGTGCTTCCCACCACCATCTCTCGATTCCGAAATGGAGGTGTCAATGAGACTGCAGATTTGTTGGAGAAAGTGGTGTACCCAGAAGAAGTAACCCATTGTGCTGCTGGACTTAAATGGTTCAAATATCTTTGCCAGAGATCTGGAAAACAGACGTTGGATGGGGATGGCTTGCTGCTGCTACATGAACATGGGGCTGAGGATAATGCATCATTGGAAATGGAGAACGAAGAAATAATTCACAAATTTCATGCAATTGTGAGAAAGCACTTCAGGGGGCCATTGAAGCCACCTTTCAACGTAGTGGCAAGAAAAGCTGCTGGTTTTGGTCCTCGATGGTATGAACCACTTGCTTTCAAACCAAATTCTACCTTGGATCCAGAATGTGAATGATGGAAATGGAACTCAGAGTTCTTTTCCAAACTATTGTTTTCCAGAATCATAATCTCGTATTTATTTAGAGCAGCATCCGAATTCCCATTCGGTGTTTTTAATGTCCAGTGAACTGTTGGAATGGTGTATCGAGATGTTAGAAGGTCAGGCATCTCATCAAGCGGTTTTTATCTCAACCGCTCCAATGGTCAAGGAAATGTTGTAAACGTACTGAAACTGATCATCTCTACCATCTCTCTATACCCCTATCAGACCTCGGTTGAGAATATGGAGTATTTTTCTAGCTTTACCGTTCATTTAAAAAATTGTTAGAAGATTAAACAATATGTTAGACGGACTTAAATCTAGAACTGCATGCTCAAATTCCTTCTGAAGTACCGACTTTCGAGGTTAAGGTTTGTTTGGAGTCCTATCCGACCCTTAAACAAGCTCATATGTGATGTTTATGTTTGCTCGTTGTCCTGTCATTTGTAAATGATGTTCTTTCTAACATAATGCAGACAAATTTTTAAATGAATGGTAAAATTTAAGGATATTTCCTACAATTTAACCTATGGTTTGTTCTGCTGTTTAAACAGGGATGTGTGGTCGACACAGACTTAAAAACCAATCATGCCAATTGATAGCCAATTTCATTTATTTTCTCGAAATAGAATGGAGTTTGGGGGCTGAGAGATCGCACCACGAGCACTAAAAAATTATTCAAAATTTTCAGAAGAAAGAAGCCATTATTAGAAAAAAAAAAAAAAAAA AGCCCAGTCCAGTTCAGCCCATCACGTTTCATCATTCACTGTCTATATCCTTCTGTACGGAGCTTCATGAAGTCGCGGCAATGGAAGAAGAGGCGGGAATTTAGGCAGAACGAGACGATGGCAGACGAGACCTTGGTTGAAGCGGCGCTTCGAGTCCTCAACACTTCCGATCCCTTCGAGAAGGCCGAACTCGGCGACAAGGTAGCTTCTCGATGGCTCAACGGCGTGATTTCTCGCCCTTACGATCCCTCCTCCGATCTCGCCGTCCCCGACCGCCCCGCCAGGCTCTCTGATGTGAAGTTGGTGTCGCCGAGTCTCATGCCGAAGCTTGGGAAGGCGGGAAGCTTACAGAGCCGGCAGGCTATTGTGCATAGTCTTGTCCACACTGAAAGTTGGGCAATCGATTTGTCGTGGGACATAATAGCTCGTTTTGGGAAACAAGAAGAGATGCCAAGAGAATTCTTCACTGATTTTGTTAGGGTAGCCCAAGACGAAGGTAGACATTTTACTCTTCTTGCTGCACGACTTAAGGAACTGGGCTCTTTCTATGGAGCACTACCCGCTCACGACGGCCTTTGGGATTCTGCTATTGCTACTTCCAAGGATTTATTAGCACGCTTGGCTATTGAGCATTGCGTCCATGAGGCTAGAGGGCTGGATGTGCTTCCCACCACCATCTCTCGATTCCGAAATGGAGGTGTCAATGAGACTGCAGATTTGTTGGAGAAAGTGGTGTACCCAGAAGAAGTAACCCATTGTGCTGCTGGACTTAAATGGTTCAAATATCTTTGCCAGAGATCTGGAAAACAGACGTTGGATGGGGATGGCTTGCTGCTGCTACATGAACATGGGGCTGAGGATAATGCATCATTGGAAATGGAGAACGAAGAAATAATTCACAAATTTCATGCAATTGTGAGAAAGCACTTCAGGGGGCCATTGAAGCCACCTTTCAACGTAGTGGCAAGAAAAGCTGCTGGTTTTGGTCCTCGATGGTATGAACCACTTGCTTTCAAACCAAATTCTACCTTGGATCCAGAATGTGAATGATGGAAATGGAACTCAGAGTTCTTTTCCAAACTATTGTTTTCCAGAATCATAATCTCGTATTTATTTAGAGCAGCATCCGAATTCCCATTCGGTGTTTTTAATGTCCAGTGAACTGTTGGAATGGTGTATCGAGATGTTAGAAGGTCAGGCATCTCATCAAGCGGTTTTTATCTCAACCGCTCCAATGGTCAAGGAAATGTTGTAAACGTACTGAAACTGATCATCTCTACCATCTCTCTATACCCCTATCAGACCTCGGTTGAGAATATGGAGTATTTTTCTAGCTTTACCGTTCATTTAAAAAATTGTTAGAAGATTAAACAATATGTTAGACGGACTTAAATCTAGAACTGCATGCTCAAATTCCTTCTGAAGTACCGACTTTCGAGGTTAAGGTTTGTTTGGAGTCCTATCCGACCCTTAAACAAGCTCATATGTGATGTTTATGTTTGCTCGTTGTCCTGTCATTTGTAAATGATGTTCTTTCTAACATAATGCAGACAAATTTTTAAATGAATGGTAAAATTTAAGGATATTTCCTACAATTTAACCTATGGTTTGTTCTGCTGTTTAAACAGGGATGTGTGGTCGACACAGACTTAAAAACCAATCATGCCAATTGATAGCCAATTTCATTTATTTTCTCGAAATAGAATGGAGTTTGGGGGCTGAGAGATCGCACCACGAGCACTAAAAAATTATTCAAAATTTTCAGAAGAAAGAAGCCATTATTAGAAAAAAAAAAAAAAAAA ATGAAGTCGCGGCAATGGAAGAAGAGGCGGGAATTTAGGCAGAACGAGACGATGGCAGACGAGACCTTGGTTGAAGCGGCGCTTCGAGTCCTCAACACTTCCGATCCCTTCGAGAAGGCCGAACTCGGCGACAAGGTAGCTTCTCGATGGCTCAACGGCGTGATTTCTCGCCCTTACGATCCCTCCTCCGATCTCGCCGTCCCCGACCGCCCCGCCAGGCTCTCTGATGTGAAGTTGGTGTCGCCGAGTCTCATGCCGAAGCTTGGGAAGGCGGGAAGCTTACAGAGCCGGCAGGCTATTGTGCATAGTCTTGTCCACACTGAAAGTTGGGCAATCGATTTGTCGTGGGACATAATAGCTCGTTTTGGGAAACAAGAAGAGATGCCAAGAGAATTCTTCACTGATTTTGTTAGGGTAGCCCAAGACGAAGGTAGACATTTTACTCTTCTTGCTGCACGACTTAAGGAACTGGGCTCTTTCTATGGAGCACTACCCGCTCACGACGGCCTTTGGGATTCTGCTATTGCTACTTCCAAGGATTTATTAGCACGCTTGGCTATTGAGCATTGCGTCCATGAGGCTAGAGGGCTGGATGTGCTTCCCACCACCATCTCTCGATTCCGAAATGGAGGTGTCAATGAGACTGCAGATTTGTTGGAGAAAGTGGTGTACCCAGAAGAAGTAACCCATTGTGCTGCTGGACTTAAATGGTTCAAATATCTTTGCCAGAGATCTGGAAAACAGACGTTGGATGGGGATGGCTTGCTGCTGCTACATGAACATGGGGCTGAGGATAATGCATCATTGGAAATGGAGAACGAAGAAATAATTCACAAATTTCATGCAATTGTGAGAAAGCACTTCAGGGGGCCATTGAAGCCACCTTTCAACGTAGTGGCAAGAAAAGCTGCTGGTTTTGGTCCTCGATGGTATGAACCACTTGCTTTCAAACCAAATTCTACCTTGGATCCAGAATGTGAATGA MKSRQWKKRREFRQNETMADETLVEAALRVLNTSDPFEKAELGDKVASRWLNGVISRPYDPSSDLAVPDRPARLSDVKLVSPSLMPKLGKAGSLQSRQAIVHSLVHTESWAIDLSWDIIARFGKQEEMPREFFTDFVRVAQDEGRHFTLLAARLKELGSFYGALPAHDGLWDSAIATSKDLLARLAIEHCVHEARGLDVLPTTISRFRNGGVNETADLLEKVVYPEEVTHCAAGLKWFKYLCQRSGKQTLDGDGLLLLHEHGAEDNASLEMENEEIIHKFHAIVRKHFRGPLKPPFNVVARKAAGFGPRWYEPLAFKPNSTLDPECE
BLAST of Cp4.1LG01g24770 vs. Swiss-Prot
Match: Y077_HAEIN (Uncharacterized protein HI_0077 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0077 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.5e-21 Identity = 73/228 (32.02%), Postives = 114/228 (50.00%), Query Frame = 1
BLAST of Cp4.1LG01g24770 vs. TrEMBL
Match: A0A0A0LMC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G385090 PE=4 SV=1) HSP 1 Score: 541.2 bits (1393), Expect = 8.7e-151 Identity = 268/308 (87.01%), Postives = 280/308 (90.91%), Query Frame = 1
BLAST of Cp4.1LG01g24770 vs. TrEMBL
Match: W9SCH9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016820 PE=4 SV=1) HSP 1 Score: 500.7 bits (1288), Expect = 1.3e-138 Identity = 244/298 (81.88%), Postives = 262/298 (87.92%), Query Frame = 1
BLAST of Cp4.1LG01g24770 vs. TrEMBL
Match: A0A0B0PV60_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_11266 PE=4 SV=1) HSP 1 Score: 500.4 bits (1287), Expect = 1.7e-138 Identity = 241/298 (80.87%), Postives = 263/298 (88.26%), Query Frame = 1
BLAST of Cp4.1LG01g24770 vs. TrEMBL
Match: V4T9B0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032023mg PE=4 SV=1) HSP 1 Score: 493.8 bits (1270), Expect = 1.6e-136 Identity = 243/308 (78.90%), Postives = 265/308 (86.04%), Query Frame = 1
BLAST of Cp4.1LG01g24770 vs. TrEMBL
Match: A0A067EVT4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022031mg PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 2.7e-136 Identity = 242/303 (79.87%), Postives = 263/303 (86.80%), Query Frame = 1
BLAST of Cp4.1LG01g24770 vs. TAIR10
Match: AT5G04520.1 (AT5G04520.1 Protein of unknown function DUF455) HSP 1 Score: 474.9 bits (1221), Expect = 3.9e-134 Identity = 231/300 (77.00%), Postives = 258/300 (86.00%), Query Frame = 1
BLAST of Cp4.1LG01g24770 vs. TAIR10
Match: AT1G06240.1 (AT1G06240.1 Protein of unknown function DUF455) HSP 1 Score: 147.9 bits (372), Expect = 1.1e-35 Identity = 102/296 (34.46%), Postives = 139/296 (46.96%), Query Frame = 1
BLAST of Cp4.1LG01g24770 vs. NCBI nr
Match: gi|449441820|ref|XP_004138680.1| (PREDICTED: uncharacterized protein LOC101205330 [Cucumis sativus]) HSP 1 Score: 541.2 bits (1393), Expect = 1.3e-150 Identity = 268/308 (87.01%), Postives = 280/308 (90.91%), Query Frame = 1
BLAST of Cp4.1LG01g24770 vs. NCBI nr
Match: gi|659113428|ref|XP_008456568.1| (PREDICTED: uncharacterized protein LOC103496484 [Cucumis melo]) HSP 1 Score: 538.1 bits (1385), Expect = 1.1e-149 Identity = 268/308 (87.01%), Postives = 279/308 (90.58%), Query Frame = 1
BLAST of Cp4.1LG01g24770 vs. NCBI nr
Match: gi|703151736|ref|XP_010110199.1| (hypothetical protein L484_016820 [Morus notabilis]) HSP 1 Score: 500.7 bits (1288), Expect = 1.9e-138 Identity = 244/298 (81.88%), Postives = 262/298 (87.92%), Query Frame = 1
BLAST of Cp4.1LG01g24770 vs. NCBI nr
Match: gi|728850920|gb|KHG30363.1| (hypothetical protein F383_11266 [Gossypium arboreum]) HSP 1 Score: 500.4 bits (1287), Expect = 2.5e-138 Identity = 241/298 (80.87%), Postives = 263/298 (88.26%), Query Frame = 1
BLAST of Cp4.1LG01g24770 vs. NCBI nr
Match: gi|1009119523|ref|XP_015876426.1| (PREDICTED: uncharacterized protein HI_0077 [Ziziphus jujuba]) HSP 1 Score: 497.3 bits (1279), Expect = 2.1e-137 Identity = 241/298 (80.87%), Postives = 264/298 (88.59%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |