Cp4.1LG01g24140 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTGGACACAGTGATGAGAGTAGCCAAAGGACTGGTTTTGGCTGCCCTGTTGGAGTATGACACCTAGTTACTAGAGGCTACTCCCTTTGTCTGCTTGGAGGATTCCTCCTTAGGGTTTGGACCCCACACACGTGGGTTCAAGACAAAGAAACTCTCCTTCACGAATCTCCTCTAATCCCTTCCCAACCAATGATCCTTAATCCCTCACGTGGGACTCCTGGCCCCACCTCCCTCTTCCCTGCCCTTATTTAAGGACCTCACCCTTCAAAACCAGATCACTTACAAGCATCAACTCATGGCAGATTCTTCTTCTGCTTCATACATACATATGGTACTTCCTTCTTTTCATTATACGACCTAAATCCGCTCTATTTGCATCGCTGATACTCGCTTCTTCGGTGCAGGTGCAACACTTGATCGAGAAGTGTTTGATCTTTCGCATGACCAAAGAAGAATGCATGGATGCCCTCTTCAAACATGCAAATATTTCACCTGTCATCACGTCAACAGGTAGTAGTCTTTCATTGTTTCAATCAAACCCTTGAATGGTATCACGTCAACAGGTAGTAGTCTTTCATTGTGCTAGCCTTCTCGCTCTTCCCCGAAGGGGTTAGAGACGAAGCGGTGTGCCAGTAAGGATGCTGGGCCCCAAAGGGGGTGGATTTGGTAGGGTCCCACATCGATTGGAGAAAGGAACGAGTGCCAACGAGGACGTTGGGCCTCGAAGGGAGTGGATTGTGATGTCTCACATTGGTTGGGGAGGAGAACAAAACACCTTTTATAAGGGTGTGGAAACCTTCCCCTAGTAGACGGGTTTTAAAGCCTTGAGGGGAAGTCCGAAAGGGAAAGCCTAAAAAGGACAATATCTGCTAGCAGGGGGCGTGGGTCATTACACAAACACTTTACTTTACGTATTATGCAGTGTGGACCGAGTTAGAGAAGGAAAACAAGGAATTCTTCGAGGCGTATGCAGAATCTCAAAGCAATAAGGATAGAATGTCGGAGGAAGAGACGAGCCAAATGATCCAAAGGATGATCTTGGATTCCTCCAAAGGGGACCCTAAAAAC TTTGGACACAGTGATGAGAGTAGCCAAAGGACTGGTTTTGGCTGCCCTGTTGGAGACCTCACCCTTCAAAACCAGATCACTTACAAGCATCAACTCATGGCAGATTCTTCTTCTGCTTCATACATACATATGGTGCAACACTTGATCGAGAAGTGTTTGATCTTTCGCATGACCAAAGAAGAATGCATGGATGCCCTCTTCAAACATGCAAATATTTCACCTGTCATCACGTCAACAGAATCTCAAAGCAATAAGGATAGAATGTCGGAGGAAGAGACGAGCCAAATGATCCAAAGGATGATCTTGGATTCCTCCAAAGGGGACCCTAAAAAC TTTGGACACAGTGATGAGAGTAGCCAAAGGACTGGTTTTGGCTGCCCTGTTGGAGACCTCACCCTTCAAAACCAGATCACTTACAAGCATCAACTCATGGCAGATTCTTCTTCTGCTTCATACATACATATGGTGCAACACTTGATCGAGAAGTGTTTGATCTTTCGCATGACCAAAGAAGAATGCATGGATGCCCTCTTCAAACATGCAAATATTTCACCTGTCATCACGTCAACAGAATCTCAAAGCAATAAGGATAGAATGTCGGAGGAAGAGACGAGCCAAATGATCCAAAGGATGATCTTGGATTCCTCCAAAGGGGACCCTAAAAAC FGHSDESSQRTGFGCPVGDLTLQNQITYKHQLMADSSSASYIHMVQHLIEKCLIFRMTKEECMDALFKHANISPVITSTESQSNKDRMSEEETSQMIQRMILDSSKGDPKN
BLAST of Cp4.1LG01g24140 vs. TrEMBL
Match: A0A0A0KU49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G505220 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.8e-23 Identity = 65/96 (67.71%), Postives = 71/96 (73.96%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. TrEMBL
Match: A0A0D2RAZ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G202600 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.1e-20 Identity = 59/90 (65.56%), Postives = 65/90 (72.22%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. TrEMBL
Match: M5XRP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013960mg PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.4e-20 Identity = 59/93 (63.44%), Postives = 66/93 (70.97%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. TrEMBL
Match: Q9M3C7_ARATH (Putative uncharacterized protein At3g55240 OS=Arabidopsis thaliana GN=T26I12.120 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.4e-20 Identity = 58/91 (63.74%), Postives = 69/91 (75.82%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. TrEMBL
Match: V4L3N5_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10010856mg PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.4e-20 Identity = 58/91 (63.74%), Postives = 69/91 (75.82%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. TAIR10
Match: AT3G55240.1 (AT3G55240.1 Plant protein 1589 of unknown function) HSP 1 Score: 106.3 bits (264), Expect = 1.2e-23 Identity = 58/91 (63.74%), Postives = 69/91 (75.82%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. TAIR10
Match: AT5G02580.1 (AT5G02580.1 Plant protein 1589 of unknown function) HSP 1 Score: 78.2 bits (191), Expect = 3.6e-15 Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. TAIR10
Match: AT3G28990.1 (AT3G28990.1 Plant protein 1589 of unknown function) HSP 1 Score: 76.6 bits (187), Expect = 1.0e-14 Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. TAIR10
Match: AT1G10657.1 (AT1G10657.1 Plant protein 1589 of unknown function) HSP 1 Score: 55.5 bits (132), Expect = 2.5e-08 Identity = 23/40 (57.50%), Postives = 33/40 (82.50%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. NCBI nr
Match: gi|449466552|ref|XP_004150990.1| (PREDICTED: uncharacterized protein LOC101208991 [Cucumis sativus]) HSP 1 Score: 116.7 bits (291), Expect = 2.6e-23 Identity = 65/96 (67.71%), Postives = 71/96 (73.96%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. NCBI nr
Match: gi|659127086|ref|XP_008463517.1| (PREDICTED: uncharacterized protein LOC103501658 [Cucumis melo]) HSP 1 Score: 115.9 bits (289), Expect = 4.4e-23 Identity = 65/96 (67.71%), Postives = 71/96 (73.96%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. NCBI nr
Match: gi|1021505863|ref|XP_016196343.1| (PREDICTED: uncharacterized protein LOC107637444 [Arachis ipaensis]) HSP 1 Score: 111.3 bits (277), Expect = 1.1e-21 Identity = 63/89 (70.79%), Postives = 68/89 (76.40%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. NCBI nr
Match: gi|694351831|ref|XP_009357652.1| (PREDICTED: uncharacterized protein LOC103948365 [Pyrus x bretschneideri]) HSP 1 Score: 109.8 bits (273), Expect = 3.2e-21 Identity = 61/93 (65.59%), Postives = 66/93 (70.97%), Query Frame = 1
BLAST of Cp4.1LG01g24140 vs. NCBI nr
Match: gi|657943835|ref|XP_008371124.1| (PREDICTED: uncharacterized protein LOC103434533 [Malus domestica]) HSP 1 Score: 109.0 bits (271), Expect = 5.4e-21 Identity = 60/93 (64.52%), Postives = 66/93 (70.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |