Cp4.1LG01g24110 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGATTCTGATGCTTCATACATACATATGGTACTTACCTTCTTCGTTATACGACCTAAATCCGTTCTATTTGCATTACGTACGTACGTTAATTATACTTTGATGTAGGTGCAACACTTGATCGAGAAGTGTCTGATCTTCCGCATGACCAAAGAAGAGTGCATGGAAGCCCTCTCCAAACATGCAAATATTTCACCTATCATCACGTCAACAGGTAGTAGTAGTAGTAGTCGTCATTTTTCATTGTTTCAATCAAACCCTTGAACGCTATGATTGAGCTAAGTCGTTCCATATTATGCAGTGTGGACCGAGTTAGAGAAGGAAAACAAGGAATTCTTCGAGACATATGCACAATCTCAAAGAGACAAGGATAGAATGTCTGAGGAAGAGACAAACCAAATGATCCAACGGATGATCTCGGAATCCTCGAAAGGGGACCCTAAAAACTAA ATGGCAGATTCTGATGCTTCATACATACATATGGTGCAACACTTGATCGAGAAGTGTCTGATCTTCCGCATGACCAAAGAAGAGTGCATGGAAGCCCTCTCCAAACATGCAAATATTTCACCTATCATCACGTCAACAGTGTGGACCGAGTTAGAGAAGGAAAACAAGGAATTCTTCGAGACATATGCACAATCTCAAAGAGACAAGGATAGAATGTCTGAGGAAGAGACAAACCAAATGATCCAACGGATGATCTCGGAATCCTCGAAAGGGGACCCTAAAAACTAA ATGGCAGATTCTGATGCTTCATACATACATATGGTGCAACACTTGATCGAGAAGTGTCTGATCTTCCGCATGACCAAAGAAGAGTGCATGGAAGCCCTCTCCAAACATGCAAATATTTCACCTATCATCACGTCAACAGTGTGGACCGAGTTAGAGAAGGAAAACAAGGAATTCTTCGAGACATATGCACAATCTCAAAGAGACAAGGATAGAATGTCTGAGGAAGAGACAAACCAAATGATCCAACGGATGATCTCGGAATCCTCGAAAGGGGACCCTAAAAACTAA MADSDASYIHMVQHLIEKCLIFRMTKEECMEALSKHANISPIITSTVWTELEKENKEFFETYAQSQRDKDRMSEEETNQMIQRMISESSKGDPKN
BLAST of Cp4.1LG01g24110 vs. TrEMBL
Match: A0A0A0KU49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G505220 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 4.6e-36 Identity = 78/95 (82.11%), Postives = 86/95 (90.53%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. TrEMBL
Match: A0A0D2RAZ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G202600 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 3.3e-34 Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. TrEMBL
Match: B9SAL5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1103690 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 3.3e-34 Identity = 76/90 (84.44%), Postives = 82/90 (91.11%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. TrEMBL
Match: V4TI04_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033177mg PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 3.3e-34 Identity = 76/89 (85.39%), Postives = 81/89 (91.01%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. TrEMBL
Match: W9R2B2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025422 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 7.4e-34 Identity = 75/90 (83.33%), Postives = 81/90 (90.00%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. TAIR10
Match: AT3G55240.1 (AT3G55240.1 Plant protein 1589 of unknown function) HSP 1 Score: 137.5 bits (345), Expect = 4.3e-33 Identity = 69/91 (75.82%), Postives = 82/91 (90.11%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. TAIR10
Match: AT3G28990.1 (AT3G28990.1 Plant protein 1589 of unknown function) HSP 1 Score: 118.2 bits (295), Expect = 2.7e-27 Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. TAIR10
Match: AT5G02580.1 (AT5G02580.1 Plant protein 1589 of unknown function) HSP 1 Score: 100.9 bits (250), Expect = 4.4e-22 Identity = 51/86 (59.30%), Postives = 67/86 (77.91%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. TAIR10
Match: AT1G10657.1 (AT1G10657.1 Plant protein 1589 of unknown function) HSP 1 Score: 69.3 bits (168), Expect = 1.4e-12 Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. TAIR10
Match: AT2G46420.1 (AT2G46420.1 Plant protein 1589 of unknown function) HSP 1 Score: 53.5 bits (127), Expect = 8.1e-08 Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. NCBI nr
Match: gi|659127086|ref|XP_008463517.1| (PREDICTED: uncharacterized protein LOC103501658 [Cucumis melo]) HSP 1 Score: 159.1 bits (401), Expect = 3.9e-36 Identity = 79/95 (83.16%), Postives = 86/95 (90.53%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. NCBI nr
Match: gi|449466552|ref|XP_004150990.1| (PREDICTED: uncharacterized protein LOC101208991 [Cucumis sativus]) HSP 1 Score: 158.3 bits (399), Expect = 6.6e-36 Identity = 78/95 (82.11%), Postives = 86/95 (90.53%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. NCBI nr
Match: gi|255564072|ref|XP_002523034.1| (PREDICTED: uncharacterized protein LOC8260844 [Ricinus communis]) HSP 1 Score: 152.1 bits (383), Expect = 4.8e-34 Identity = 76/90 (84.44%), Postives = 82/90 (91.11%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. NCBI nr
Match: gi|823240447|ref|XP_012452840.1| (PREDICTED: uncharacterized protein LOC105774815 [Gossypium raimondii]) HSP 1 Score: 152.1 bits (383), Expect = 4.8e-34 Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 1
BLAST of Cp4.1LG01g24110 vs. NCBI nr
Match: gi|567887188|ref|XP_006436116.1| (hypothetical protein CICLE_v10033177mg [Citrus clementina]) HSP 1 Score: 152.1 bits (383), Expect = 4.8e-34 Identity = 76/89 (85.39%), Postives = 81/89 (91.01%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |