Cp4.1LG01g23100 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g23100
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protein CLP1 homolog
Location	Cp4.1LG01 : 19902236 .. 19906713 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCCCCACTAGAAGCGTACCCTCTTCAATCTCAATTCAATTTTCAGCACCTCTCCGTCTCCATTTACATCGTCGGACGCCGTCGCCTCCCGCCGCAAGCTCGCCCTTGGATACTGCCTCCGGTCATCGCCTTTCTCAGTCTTTTTCTCTCTTTACCTTCTATTTTGTGGCAGAGCCAAACCAAATTCCAGCCATAATTTATCTTCAGGTGAGAGTAGTCATAATGGGCACACTAACTCGCTAGTATAAGTAGCAATACGAGTCAATGGTGACCACTACGAAATTTTGAATGTAGTCTCGCTGCGTTGCGAATAATTTTCCGCATCATTTTAGAAATTGTGTATTTTCTCACTTCACATTTACAGTATAAACTCATGTTGATGTGTGAAGTAAGTTAATAAATGTCAATTTGTCGAGTATGCAATTGATTGGATGAATTCAACTCTAGAGTTCTGTTCTTTGTTTCAATATTTTATTTTGTTGTCTGCTTTGATTTTTGTGGGTCTAAAACCCTAAACCCGCCAACTATTTTCTTGAAATTTGATTTCTTGATTCAATGAACCATTGACGCCTCGTGCAGCTCAATCGTTGTGTGACGTTATCCGAGGGATAGAGTAGCTATTTATAGTTACAGTGAGTGCAAACCAGAAGCCTACCATCTAAAATTGTTGATCTAGCTTGGGAAAAACGAAAAAGTTCGCATTTGGGTGAGGCATGGCGTACGGTGGTCCTGCCACGGTGGCTGGCTCAGCTTCGACTTCGTCTGTCAGACAGGTTAAGTTGGATAGGGAGAGCGAGCTCAGGATTGAAGTTGGAAACGACTCGCCTCTCCGTTTACGGCTGCTCTCTGGTAATGCTGAGATCTTTGGCACAGAGCTTCCTCCTGAAATATGGCTCACTTTACCACCAAGGCTGAAAATTGCTGTAAGATTTAATCAATGAGGCTTTCTTGCCCAATTTGACTTATATAAGTTTCAGAACGGAATTTCATTTCAAATTTCTTTCGAGTTTTGGTCTTTCTTGGTCAATCATTTCACAAGCATGCTGTTTAGTTTGAAATTGTATTTAGTAAGGGGATGGGTCTGCTTTGATCTTCCATTATTTTGAAAATTTGAGTTTGATGTTAAAGGTCTTCACTTGGTATGGAGCCACGCTTGAAATGGATGGTGCGACTGAAACTGATTATACGGCAGATGAGGTATAAATTTTGCTGGTTTGTATAGGCTATGGCTTACATCTAAGTCTATGAAGGCAAGGGTCTTCTCTGCACTAGAGATTTTTTGTTCAATGACTAAGATTCAATTCTCTATTGTTTGTTTACAGACACCCATGATCGGTTATGTGAATGTCCATGCCATTCTTGAAGCACGAAGAAGCCGTGCTAGAGCTTCATCAGCCGATGACTCCGGTTCTACACAGGTTCTTCTTTTCTTTTTTCTAATCAAAATGCTCAACTGAGCTAGTTTTTGCTCTGGTGGGCTAGAGTCAGTTTTGTGGGATTCTTGTGTTCGGGTCACCCTAATAACTTACATAGTAGGAACATAATTTCATTAACTATATTGATATTTAGAATTTTCTTTTTTTGGTTGCATTAGGGTCCAAGGGTCATCGTTGTGGGGCCTACCGATTCAGGGAAGAGCACCTTGTCAAGGATGCTCCTTAGTTGGGCTGCAAAACAGGGTTGGAAGCCTACATTTGTAGATTTGGATATTGGCCAAGGATCTATAACAATTCCTGGGTGCATTGCTGCTACCCCTATCGAGTTGCCCATTGATCCTGTGGAAGGCATCCCCCTGGAAATGCCCCTGGTTTACTTTTATGGACACACGACTCCAAGGTAAATAAACCTGCTGCAGTATTTATTCTTCTTGAACTTTTACAGTGTTCATTTTCCCAACAATATGCTATGCTGAGAGTAAATTTTCATTTTAAGCCAAATGTAATGTGTTCCAATGCCCTAAGTTTGAGGTTCTTTAACAGCAATAACGTTGATCTGTACAAAGTGCTTGTGAAGGAGCTTGCCCAAGTGCTGGAGAGGCAATTTACTGGCAATGCAGAATCCCGAGCTGCGGGTATGGTTATCAACACAATGGGATGGATCGAGGGTGTAGGCTATGAGGTACTGAAACTTCTATACAAATTATGCAATTATGTTACACATTCCAGTTGCTAATTTCCATTACCACAATTGGTTATGTATCATTGTTCTTGTTTGTTATCTTGCTGCAGCTGCTTCTACATGCTATCGATACACTCAATGCTAATGTTGTCCTGGTTTTGGGTCAAGTAAGTTGCTTCTTTTTGTGTTTCTCTCAATTATTAAACTTGGTTTAACTAGAAATTGGAACTTGTTGAAAACTCTTCAGGTATTCTTTCCATGTGCTTTCCTTTATGCATTGGTTTATTTACCTATGATATAGCAGTTTTATTATTATAATGACATTATAAACCGTTAGTATCAAATGTTAGAAGGAAATTTAGTACAATTGTAATCATTACACAAAGGCTAAATGTATGTGATATACTCCTAAAAAGATGTGCAAACTATGTCATTTCTCCTATGTGATTCTGCCCCCAAATGAGTCGTTGAGGATGTGATCAGTTTAAGTGAGAGAGTGTCAACCATATTAGAAGAAAGCTAGTTGTGACCTACCAAAGTGCAAGCAGAAGGAAGGTGACTGCAAGTCACACTCATTGGATGTTGAAGGCCAAAGGAGAGAAGTGTTGTGATGCAACCAAGGAGGACAACGTATCATCTAACACACCAAGAAAAGTATTCAAGAAAGTCAAGCCAAGGTGCAAGCTAGAAGAGAACCCACCGTTTATACTAGCAAAAGTAGTAGTCGGAGTAGACTTGCTCTAAATATACTTTCTTCTTTTCTTCAAACTAATTTATAATCCTTATACTCTTCTATCCATAAATATCAAAGAAAACTTTCTAATATTGTACCTTAAAGGCAACCTTCTGAAGCAATAGACGCACAATAATTTATAGAATAATTGACCGTTAATATTTTTAATATTTTACTGTTTTGCAGGAGAAACTTTGGAGCATGCTCAAAGATGTACTAAAGAATAAGCCTAACGTAGATGTTGTGAAACTTCAAAAGTCCGGTGGTGTTGTATCCAGAAACGCTAAATATCGTCAAAAAGCCAGGAGTTACAGAATAAGGGTAAGCAAGGAAGTTGTATAAATGGTGGATGATTGGTTTTATTTTAACAGTCTCTTGTTTTGACCTTTTCAAATGACAATGGCAACTGAATTGCATCCTCAGTCTTGATGCAATTTGTCTTACTCATATGATTCAACTAAATTGAATCCTTGCCACGGAATTCCGTCTATTCCATTTTGAAACTGACAAGGCTATTACAAAATGCTGTGATGTTTTGCAGGAATATTTTTATGGACCTGCAAATGATCTCTCACCCCACTCAAACATCGCAAACTTCAGCGATCTGTTCATTTATCGCATTGGAGGTGGGCCACAGGCCCCGCGGTCAGCTCTGCCAATTGGTGCAGAACCGGCTGCAGATCCCACTAGATTAGTGCCTGTCAATATTAATCGGGATTTGCTCCATTTGGTTCTTGCTGTTTCATTTGCTAAAGAACCTGATGAAATTATCTCAAGGTGATTTCTTTTGGAATCTTGCTTTTCTTTTCTTCAGTCTCCATCTTTTATAAAGCTATCAAAAAAGAGTAGAAGACATGACCAATGTGTAATCCATGGGTTATACTCTAAAATAAGGATTAATTCTAACCCTTTTCATTTTCCCATCATTTGAAAACCTGATTCGTTCATACCGATCTGTGTCATTAAAGCAAAAAATCACATCAGTTCATTTGTTACATCTACAAATTTTTTTAAGCTCTTAGAAACCATTTCAAAACATGGTCTAAGGCTACAACTGTTATGTAACCCTCTCTACGAGTTGACGATTTTTTTCCTCTTTGGGTGCAGCAATGTTGCTGGATTTGTGTATATTACTGATATCGACATCCAAAGGTTTGAACTAAACAATAAGCTTATGATTTGGATGAAAGTATGTGAAGAAAGTCTGAAATTGTAACTTCTAAATCTAACAATGGGATTTGTTTTTGGATGACAGGAAGAAAATTACATATCTAGCGCCATCGGCAGGGGATCTTCCTGGCAAATATTTGATCGTGGGAACTTTGACCTGGATTGAGACCTGAAAATCCAATCCCACCACTTTATTACTATTCTTTTTGTTTGTGACACAGGGGACAGAGAGTAAAAGGGGAACCATAAATTATCTTTGAGGACAAAAATTTAACTGTAGGCATTAGATGTGAATAGATAAAGTCCAGGAATATGTGTGATGTGCAATATCATTTGTGGGAGTGAATTTTATAAACTTGGAAAAAACTAAGACCTATTTCGAATGAGGCAGAACATTTTGATTTCAAATAGAGATAAGGATGGAGGTTGAAAATGCATTAGTTGATCTTTGTTTCA

mRNA sequence

AATCCCCACTAGAAGCGTACCCTCTTCAATCTCAATTCAATTTTCAGCACCTCTCCGTCTCCATTTACATCGTCGGACGCCGTCGCCTCCCGCCGCAAGCTCGCCCTTGGATACTGCCTCCGGTCATCGCCTTTCTCAGTCTTTTTCTCTCTTTACCTTCTATTTTGTGGCAGAGCCAAACCAAATTCCAGCCATAATTTATCTTCAGCTCAATCGTTGTGTGACGTTATCCGAGGGATAGAGTAGCTATTTATAGTTACAGTGAGTGCAAACCAGAAGCCTACCATCTAAAATTGTTGATCTAGCTTGGGAAAAACGAAAAAGTTCGCATTTGGGTGAGGCATGGCGTACGGTGGTCCTGCCACGGTGGCTGGCTCAGCTTCGACTTCGTCTGTCAGACAGGTTAAGTTGGATAGGGAGAGCGAGCTCAGGATTGAAGTTGGAAACGACTCGCCTCTCCGTTTACGGCTGCTCTCTGGTAATGCTGAGATCTTTGGCACAGAGCTTCCTCCTGAAATATGGCTCACTTTACCACCAAGGCTGAAAATTGCTGTCTTCACTTGGTATGGAGCCACGCTTGAAATGGATGGTGCGACTGAAACTGATTATACGGCAGATGAGACACCCATGATCGGTTATGTGAATGTCCATGCCATTCTTGAAGCACGAAGAAGCCGTGCTAGAGCTTCATCAGCCGATGACTCCGGTTCTACACAGGGTCCAAGGGTCATCGTTGTGGGGCCTACCGATTCAGGGAAGAGCACCTTGTCAAGGATGCTCCTTAGTTGGGCTGCAAAACAGGGTTGGAAGCCTACATTTGTAGATTTGGATATTGGCCAAGGATCTATAACAATTCCTGGGTGCATTGCTGCTACCCCTATCGAGTTGCCCATTGATCCTGTGGAAGGCATCCCCCTGGAAATGCCCCTGGTTTACTTTTATGGACACACGACTCCAAGCAATAACGTTGATCTGTACAAAGTGCTTGTGAAGGAGCTTGCCCAAGTGCTGGAGAGGCAATTTACTGGCAATGCAGAATCCCGAGCTGCGGGTATGGTTATCAACACAATGGGATGGATCGAGGGTGTAGGCTATGAGCTGCTTCTACATGCTATCGATACACTCAATGCTAATGTTGTCCTGGTTTTGGGTCAAGAGAAACTTTGGAGCATGCTCAAAGATGTACTAAAGAATAAGCCTAACGTAGATGTTGTGAAACTTCAAAAGTCCGGTGGTGTTGTATCCAGAAACGCTAAATATCGTCAAAAAGCCAGGAGTTACAGAATAAGGGAATATTTTTATGGACCTGCAAATGATCTCTCACCCCACTCAAACATCGCAAACTTCAGCGATCTGTTCATTTATCGCATTGGAGGTGGGCCACAGGCCCCGCGGTCAGCTCTGCCAATTGGTGCAGAACCGGCTGCAGATCCCACTAGATTAGTGCCTGTCAATATTAATCGGGATTTGCTCCATTTGGTTCTTGCTGTTTCATTTGCTAAAGAACCTGATGAAATTATCTCAAGCAATGTTGCTGGATTTGTGTATATTACTGATATCGACATCCAAAGGAAGAAAATTACATATCTAGCGCCATCGGCAGGGGATCTTCCTGGCAAATATTTGATCGTGGGAACTTTGACCTGGATTGAGACCTGAAAATCCAATCCCACCACTTTATTACTATTCTTTTTGTTTGTGACACAGGGGACAGAGAGTAAAAGGGGAACCATAAATTATCTTTGAGGACAAAAATTTAACTGTAGGCATTAGATGTGAATAGATAAAGTCCAGGAATATGTGTGATGTGCAATATCATTTGTGGGAGTGAATTTTATAAACTTGGAAAAAACTAAGACCTATTTCGAATGAGGCAGAACATTTTGATTTCAAATAGAGATAAGGATGGAGGTTGAAAATGCATTAGTTGATCTTTGTTTCA

Coding sequence (CDS)

ATGGCGTACGGTGGTCCTGCCACGGTGGCTGGCTCAGCTTCGACTTCGTCTGTCAGACAGGTTAAGTTGGATAGGGAGAGCGAGCTCAGGATTGAAGTTGGAAACGACTCGCCTCTCCGTTTACGGCTGCTCTCTGGTAATGCTGAGATCTTTGGCACAGAGCTTCCTCCTGAAATATGGCTCACTTTACCACCAAGGCTGAAAATTGCTGTCTTCACTTGGTATGGAGCCACGCTTGAAATGGATGGTGCGACTGAAACTGATTATACGGCAGATGAGACACCCATGATCGGTTATGTGAATGTCCATGCCATTCTTGAAGCACGAAGAAGCCGTGCTAGAGCTTCATCAGCCGATGACTCCGGTTCTACACAGGGTCCAAGGGTCATCGTTGTGGGGCCTACCGATTCAGGGAAGAGCACCTTGTCAAGGATGCTCCTTAGTTGGGCTGCAAAACAGGGTTGGAAGCCTACATTTGTAGATTTGGATATTGGCCAAGGATCTATAACAATTCCTGGGTGCATTGCTGCTACCCCTATCGAGTTGCCCATTGATCCTGTGGAAGGCATCCCCCTGGAAATGCCCCTGGTTTACTTTTATGGACACACGACTCCAAGCAATAACGTTGATCTGTACAAAGTGCTTGTGAAGGAGCTTGCCCAAGTGCTGGAGAGGCAATTTACTGGCAATGCAGAATCCCGAGCTGCGGGTATGGTTATCAACACAATGGGATGGATCGAGGGTGTAGGCTATGAGCTGCTTCTACATGCTATCGATACACTCAATGCTAATGTTGTCCTGGTTTTGGGTCAAGAGAAACTTTGGAGCATGCTCAAAGATGTACTAAAGAATAAGCCTAACGTAGATGTTGTGAAACTTCAAAAGTCCGGTGGTGTTGTATCCAGAAACGCTAAATATCGTCAAAAAGCCAGGAGTTACAGAATAAGGGAATATTTTTATGGACCTGCAAATGATCTCTCACCCCACTCAAACATCGCAAACTTCAGCGATCTGTTCATTTATCGCATTGGAGGTGGGCCACAGGCCCCGCGGTCAGCTCTGCCAATTGGTGCAGAACCGGCTGCAGATCCCACTAGATTAGTGCCTGTCAATATTAATCGGGATTTGCTCCATTTGGTTCTTGCTGTTTCATTTGCTAAAGAACCTGATGAAATTATCTCAAGCAATGTTGCTGGATTTGTGTATATTACTGATATCGACATCCAAAGGAAGAAAATTACATATCTAGCGCCATCGGCAGGGGATCTTCCTGGCAAATATTTGATCGTGGGAACTTTGACCTGGATTGAGACCTGA

Protein sequence

MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIWLTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADDSGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVINTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSAGDLPGKYLIVGTLTWIET

Homology

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BLAST of Cp4.1LG01g23100 vs. Swiss-Prot
Match: CLP1_ARATH (Protein CLP1 homolog OS=Arabidopsis thaliana GN=CLPS3 PE=1 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 1.5e-183
Identity = 310/444 (69.82%), Postives = 390/444 (87.84%), Query Frame = 1


Query: 1   MAYGGPA----TVAGSA-STSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTEL 60
           MAYGGP+     ++G+   +++++QVKL+RESELRIEV ++ PLRLR+++G AEIFG+EL
Sbjct: 1   MAYGGPSMNPPALSGAVPGSANLKQVKLERESELRIEV-SEEPLRLRVVNGTAEIFGSEL 60

Query: 61  PPEIWLTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARA 120
           PPEIW T PPR+K AVFTWYGAT+EMDG TETDYTADETPM+ Y+NVHAIL+ARR  A+A
Sbjct: 61  PPEIWRTFPPRMKFAVFTWYGATIEMDGVTETDYTADETPMVSYINVHAILDARRRFAKA 120

Query: 121 SSADDSGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCI 180
           S+++D  S+QGPRVIVVGPTDSGKSTL++MLLSWAAKQGW+PTFVDLD+GQGSITIPG I
Sbjct: 121 STSNDPESSQGPRVIVVGPTDSGKSTLTKMLLSWAAKQGWRPTFVDLDVGQGSITIPGSI 180

Query: 181 AATPIELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRA 240
           AA PIE+P+DPVEG PL+M LVY+YGH +P+ NV+LYK LVKELAQVLE+QF GN ESRA
Sbjct: 181 AAAPIEMPLDPVEGFPLDMALVYYYGHASPNMNVELYKALVKELAQVLEKQFVGNPESRA 240

Query: 241 AGMVINTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQK 300
           AGMVINTMGWIEG+GYELLLHAIDT NA+VVLVLGQEKL+S LKDVL++K NVDVVKL K
Sbjct: 241 AGMVINTMGWIEGIGYELLLHAIDTFNASVVLVLGQEKLFSRLKDVLRSKSNVDVVKLHK 300

Query: 301 SGGVVSRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALP 360
           SGGVV+R  + R+++R+++I+EYFYG + +LSP++N ++FSDL ++RIGGGPQAP+SALP
Sbjct: 301 SGGVVARVKEVRKRSRNFKIQEYFYGLSKELSPYANTSSFSDLQVFRIGGGPQAPKSALP 360

Query: 361 IGAEPAADPTRLVPVNI-NRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKIT 420
            G+   ++P R+ PVNI +RDLLH VLAVS+A+EPD+IISSNV+GFVY+T++++Q+KKIT
Sbjct: 361 AGSTSVSNPLRVTPVNIDDRDLLHSVLAVSYAEEPDQIISSNVSGFVYVTEVNVQKKKIT 420

Query: 421 YLAPSAGDLPGKYLIVGTLTWIET 439
           YLAPS G LP K L+ G+L W+E+
Sbjct: 421 YLAPSPGTLPSKLLVAGSLAWLES 443

[Close]

BLAST of Cp4.1LG01g23100 vs. Swiss-Prot
Match: CLP5_ARATH (Protein CLP1 homolog 5 OS=Arabidopsis thaliana GN=CLPS5 PE=1 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.4e-125
Identity = 226/419 (53.94%), Postives = 308/419 (73.51%), Query Frame = 1


Query: 18  VRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIWLTLPPRLKIAVFTWYGA 77
           +R+VKL+++SELRIE+   SPLRLRLL G AEIFG ELP E+W+T PP +  AVFTWYGA
Sbjct: 6   IRRVKLEKQSELRIELQPTSPLRLRLLDGKAEIFGYELPHEVWITFPPLMTFAVFTWYGA 65

Query: 78  TLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADDSGSTQGPRVIVVGPTDS 137
           T+E+DG T  +Y + ETPM+ Y+ +H  L+ +R R  +S+ D + S +GPRVI+VG  DS
Sbjct: 66  TIEIDGITGNEYISCETPMVNYLGLHNSLQVQRHRVTSSTRDSASSQEGPRVIIVGDIDS 125

Query: 138 GKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIPLEMPLV 197
           GKSTL++MLL+WA K GWKPTFVDL++GQ SITIPG IAA PI++ +DPVEG PL+  L+
Sbjct: 126 GKSTLAKMLLNWAVKDGWKPTFVDLNVGQSSITIPGTIAAAPIKMLVDPVEGFPLDKALI 185

Query: 198 YFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVINTMGWIEGVGYELLLHA 257
           +++G T PS N+ LY+ LV+ELA+ L+ +F+ NAESRA+GMVI+TMG+I   GY LLLHA
Sbjct: 186 HYFGLTNPSVNLRLYRTLVEELARELKEEFSANAESRASGMVIDTMGFIVREGYALLLHA 245

Query: 258 IDTLNANVVLVLGQ-EKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKYRQKARSYRIR 317
           I T NA++V+V+GQ EKL   LK  LK K N+ V+ L+KS GV SR++ +R+  R+  I+
Sbjct: 246 IRTFNASLVIVVGQEEKLVYDLKKNLKFKKNLQVLNLEKSEGVFSRSSDFRKTLRNSNIQ 305

Query: 318 EYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVNINRDL 377
            YFYG  NDL+ ++    FSD+ +YRIG       S      +   DP ++  V I+  L
Sbjct: 306 NYFYGVTNDLTVYTKTVKFSDVQVYRIG---DFRVSGSTSAHQRGNDPLKITLVTIDEHL 365

Query: 378 LHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSAGDLPGKYLIVGTLTW 436
           ++ VLA+S+A +PD+IISS VAGFV I ++DI  ++ITY++PSA +LP K LI+GTLTW
Sbjct: 366 VNKVLAISYAIKPDQIISSIVAGFVCIKNVDISEERITYVSPSAAELPSKILILGTLTW 421

[Close]

BLAST of Cp4.1LG01g23100 vs. Swiss-Prot
Match: CLP1_DICDI (Protein CLP1 homolog OS=Dictyostelium discoideum GN=clp1 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 3.3e-98
Identity = 191/427 (44.73%), Postives = 275/427 (64.40%), Query Frame = 1


Query: 12  SASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIWLTLPPRLKIAV 71
           S + S++R +++ +E  LR E+  D    ++L+ G AE FGTEL       L    K AV
Sbjct: 41  SINQSTIRTLEITQE--LRYEIDFDQNGWMKLIEGTAECFGTELSLNKVYKLSGT-KGAV 100

Query: 72  FTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADDSGSTQGPRVIV 131
           FTW G  +E+    +  Y  ++TPM  Y  V+  L+A R      S  D     GPRVI+
Sbjct: 101 FTWTGCKIEITNNCQP-YIGEKTPMPQYAGVYQELDAFRV-----SILDEPKKSGPRVII 160

Query: 132 VGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIP 191
           VGPTDSGKS+LS++LL+++A+ G++P FVDLD GQGSITIPG I+A  I+ P+D  EG+ 
Sbjct: 161 VGPTDSGKSSLSKILLAYSARSGYQPLFVDLDPGQGSITIPGTISAAHIQNPLDIEEGLA 220

Query: 192 LEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVINTMGWIEGVGY 251
             +PL +FYGHT+   N DL+K L K LA  +++Q   +  SR +G + NT GWI+G+GY
Sbjct: 221 GGIPLAHFYGHTSLDVNPDLFKALCKNLASFIDKQLDSSNISRISGFIANTCGWIDGLGY 280

Query: 252 ELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPN-VDVVKLQKSGGVVSRNAKYRQKA 311
           ++LL  ID   AN+++V+  EKL+S +      K N + ++KL KSGGV  R   +R+K 
Sbjct: 281 KILLQNIDVFKANLIIVMDNEKLYSDISSHYSQKDNSIKIIKLPKSGGVFIRPPVFRKKT 340

Query: 312 RSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPV 371
           R  RI+EYF G  ++LSPH  + +F D+ IYR GGGP AP SALPIG     DP ++  V
Sbjct: 341 RMNRIKEYFNGINDNLSPHYIVLDFKDVSIYRTGGGPAAPASALPIGTSSQIDPLQITEV 400

Query: 372 NINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSAGDLPGKYLIV 431
             + D+ H + A+S+AK+   I  SNVAGF+Y++DID++ KKIT ++P+ G LP ++L++
Sbjct: 401 YPSLDMCHSIFAISYAKQASNIFHSNVAGFLYVSDIDMETKKITVISPAPGPLPSRFLLL 458

Query: 432 GTLTWIE 438
           GTL W+E
Sbjct: 461 GTLKWME 458

[Close]

BLAST of Cp4.1LG01g23100 vs. Swiss-Prot
Match: CLP1_CHICK (Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Gallus gallus GN=CLP1 PE=2 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 7.7e-95
Identity = 183/428 (42.76%), Postives = 266/428 (62.15%), Query Frame = 1


Query: 11  GSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIWLTLPPRLKIA 70
           G      V + +L+RE+ELR EV     +++ LL+G AE+FGTEL      T     K+A
Sbjct: 5   GGDEKKQVAKFELERETELRFEVEASQTVQMELLTGMAEVFGTELTRNKKFTFDAGAKVA 64

Query: 71  VFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADDSGSTQGPRVI 130
           VFTW+G T+++ G TE  Y + +TPM+ Y+N H  LE  R +A           +GPRV+
Sbjct: 65  VFTWHGCTVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEREDE------RGPRVM 124

Query: 131 VVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGI 190
           VVGPTD GKST+ R+LL++A + G +PTFV+LD+GQGS++IPG + A  IE P D  EG 
Sbjct: 125 VVGPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGF 184

Query: 191 PLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVINTMGWIEGVG 250
            L+ PLVY +G TTP  N+ LY  +   LA V  ++   N  +  +G VINT GW++G G
Sbjct: 185 SLQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSG 244

Query: 251 YELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKYRQKA 310
           Y+ L+HA      +VV+VL QE+L++ LK  L +   V  V L KSGGVV R+  +R++ 
Sbjct: 245 YQALVHAASAFEVDVVVVLDQERLYNELKRDLPH--FVRTVLLPKSGGVVERSKDFRREC 304

Query: 311 RSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPV 370
           R  RIREYFYG      PH+    FSD+ IY++ G P  P S LP+G     +  +LVPV
Sbjct: 305 RDDRIREYFYGFRGCFYPHAFDVKFSDVKIYKV-GAPTIPDSCLPLGMSQEDNQLKLVPV 364

Query: 371 NINRDLLHLVLAVSFAKEPDEIIS-SNVAGFVYITDIDIQRKKITYLAPSAGDLPGKYLI 430
              RD++H +L+VS A  PD+ IS ++VAGF+ +T +D++R+  T L+P+   LP  +L+
Sbjct: 365 TPGRDMVHHLLSVSMADSPDDNISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLL 423

Query: 431 VGTLTWIE 438
           +  + +++
Sbjct: 425 IMDIRFMD 423

[Close]

BLAST of Cp4.1LG01g23100 vs. Swiss-Prot
Match: CLP1_NEMVE (Protein CLP1 homolog OS=Nematostella vectensis GN=v1g236308 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.0e-94
Identity = 180/427 (42.15%), Postives = 276/427 (64.64%), Query Frame = 1


Query: 13  ASTSSVRQVKLDRESELRIEVGN-DSPLRLRLLSGNAEIFGTELPPEIWLTLPPRLKIAV 72
           A +   +Q KL++++ELR+EV   D    + LLSGNAE+FGTEL      T  P  K+A+
Sbjct: 7   AKSEERQQWKLEKDTELRVEVAEGDREAIIVLLSGNAEVFGTELVKNKKFTFRPGSKLAI 66

Query: 73  FTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADDSGSTQGPRVIV 132
           FTW G ++E+ G  E  Y + ETPM+ Y+N+H  LE  R RA    A +     GPRV+V
Sbjct: 67  FTWQGCSVEIQGPLEVAYKSKETPMVMYLNLHMALEQMRERADKHEAVE----LGPRVMV 126

Query: 133 VGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIP 192
           VGPTD GKST+ ++LL++A + G +P  VDLD+GQG+ ++PG + A  +E P D  EG  
Sbjct: 127 VGPTDVGKSTVCQLLLNYAVRMGRRPISVDLDVGQGTASVPGSMGALLLERPADIEEGFS 186

Query: 193 LEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVINTMGWIEGVGY 252
           L+ PLVY +GHT+PS N  LY +L  ++A ++ ++F  N ++ A+G VINT GW+ G+GY
Sbjct: 187 LQAPLVYLFGHTSPSPNEKLYNMLSSKIADIVFQRFERNKKACASGCVINTCGWVTGMGY 246

Query: 253 ELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKYRQKAR 312
            +++HA      NV++VL QE+L++ LK+   +K  V +V L KSGGVV R+ + R+K R
Sbjct: 247 RIIVHAATAFKVNVIVVLDQERLYNDLKNQFGDK--VQIVHLPKSGGVVVRSRETRRKVR 306

Query: 313 SYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVN 372
             R+R YFYG   +L PHS    FSD+ +++I G P  P S LP+G +   + T+LVPV 
Sbjct: 307 DERLRSYFYGQQANLYPHSFEVKFSDVKLFKI-GAPLVPDSCLPLGMDQGQNETKLVPVV 366

Query: 373 INRDLLHLVLAVSFAKEPDE-IISSNVAGFVYITDIDIQRKKITYLAPSAGDLPGKYLIV 432
             +DL H +LA+S A+  +E ++ +NV GF+ + ++D+ R+ +  L+P+   LP K+L++
Sbjct: 367 PTKDLKHCLLAISAAESLEEDLVQTNVIGFLVVNEVDLDREVMVVLSPAPRPLPRKFLLL 426

Query: 433 GTLTWIE 438
             + +++
Sbjct: 427 SEIKFMD 426

[Close]

BLAST of Cp4.1LG01g23100 vs. TrEMBL
Match: A0A0A0KU52_CUCSA (Protein CLP1 homolog OS=Cucumis sativus GN=Csa_5G635390 PE=3 SV=1)

HSP 1 Score: 860.1 bits (2221), Expect = 1.1e-246
Identity = 430/438 (98.17%), Postives = 436/438 (99.54%), Query Frame = 1


Query: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60
           MAYGGPATVAGSAS SS+RQVKLDRESELRIEVG+DSPLRLRLLSGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPATVAGSASASSIRQVKLDRESELRIEVGSDSPLRLRLLSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASS+DD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSSDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
            GSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 PGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240
           ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI
Sbjct: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240

Query: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300

Query: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK+RQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420
           AADPTRLVPVNINRDLLHLVLAVSFAKEP+EIISSNVAGFVYITDIDIQRKKITYLAPSA
Sbjct: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPEEIISSNVAGFVYITDIDIQRKKITYLAPSA 420

Query: 421 GDLPGKYLIVGTLTWIET 439
           G+LPGKYLIVGTLTWIET
Sbjct: 421 GELPGKYLIVGTLTWIET 438

[Close]

BLAST of Cp4.1LG01g23100 vs. TrEMBL
Match: I1NJ79_SOYBN (Protein CLP1 homolog OS=Glycine max GN=GLYMA_20G242900 PE=3 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 3.6e-224
Identity = 382/438 (87.21%), Postives = 415/438 (94.75%), Query Frame = 1


Query: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60
           MAYGG   V GS S S+++QVKL+RESELRIEVGND+PLRLRLL+G AEIFGTELPPEIW
Sbjct: 1   MAYGGAGPVGGSGSASTIKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120
           L  PPRLK AVFTWYGAT+EMDGATETDYTADETPM+ YVNVHA+L+ RRSRA+ASS DD
Sbjct: 61  LNFPPRLKFAVFTWYGATIEMDGATETDYTADETPMVSYVNVHAVLDGRRSRAKASSPDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
           SGS+QGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 SGSSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240
           E+PIDPVEGIPLEMPLVY+YGH TPSNNV+LYKVLVKELA ++ERQFTGNAESRA+GMVI
Sbjct: 181 EMPIDPVEGIPLEMPLVYYYGHATPSNNVELYKVLVKELAGMIERQFTGNAESRASGMVI 240

Query: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEGVGY+LLLHAI T  ANVVLVLGQEKL SMLKDVLK++P VDVVKLQ+SGGVV
Sbjct: 241 NTMGWIEGVGYDLLLHAIRTFKANVVLVLGQEKLCSMLKDVLKSEPKVDVVKLQRSGGVV 300

Query: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK RQKARSYRIREYFYG +NDLSPHSNIANFSDLF+YR+GGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKVRQKARSYRIREYFYGLSNDLSPHSNIANFSDLFVYRVGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420
           AADPTR+VPVNINRDLLHLVLAVSFAKEPDEIISSNVAGF+Y+TD+DIQRKKITYLAPSA
Sbjct: 361 AADPTRVVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFIYVTDVDIQRKKITYLAPSA 420

Query: 421 GDLPGKYLIVGTLTWIET 439
           G+LP KYLI+G+LTW+ET
Sbjct: 421 GELPSKYLIMGSLTWLET 438

[Close]

BLAST of Cp4.1LG01g23100 vs. TrEMBL
Match: A0A151RWZ1_CAJCA (Protein CLP1 isogeny OS=Cajanus cajan GN=KK1_031301 PE=3 SV=1)

HSP 1 Score: 780.0 bits (2013), Expect = 1.5e-222
Identity = 380/438 (86.76%), Postives = 412/438 (94.06%), Query Frame = 1


Query: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60
           MAYGG   V GS S S+++QVKL+RESELRIEVGND+PLRLRLL+G AEIFGTELPPEIW
Sbjct: 1   MAYGGAGPVGGSGSASTIKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120
           L  PPRLK AVFTWYGAT+EMDG TETDYTADETPM+ YVNVHA+L+ RRSRA+AS  DD
Sbjct: 61  LNFPPRLKFAVFTWYGATIEMDGTTETDYTADETPMVSYVNVHAVLDGRRSRAKASPPDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
           S S+QGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 SESSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240
           E+PIDPVEGIPLEMPLVYFYGH TPSNNV+LYKVLVKELA ++ERQFTGNAESRA+GMVI
Sbjct: 181 EMPIDPVEGIPLEMPLVYFYGHATPSNNVELYKVLVKELAGMIERQFTGNAESRASGMVI 240

Query: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEGVGY+LLLHAI T  ANVVLVLGQEKL SMLKDVLK++P VDVVKLQ+SGGVV
Sbjct: 241 NTMGWIEGVGYDLLLHAIRTFKANVVLVLGQEKLCSMLKDVLKSEPKVDVVKLQRSGGVV 300

Query: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK RQKARSYRIREYFYG +NDLSPHSNIANFSDLF+YR+GGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKVRQKARSYRIREYFYGLSNDLSPHSNIANFSDLFVYRVGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420
           AADPTR+VPVNINRDLLHLVLAVSFAKEPDEIISSNVAGF+Y+TDIDIQRKK+TYLAPSA
Sbjct: 361 AADPTRVVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFIYVTDIDIQRKKVTYLAPSA 420

Query: 421 GDLPGKYLIVGTLTWIET 439
           G+LP KYLI+G+LTW+ET
Sbjct: 421 GELPSKYLIMGSLTWLET 438

[Close]

BLAST of Cp4.1LG01g23100 vs. TrEMBL
Match: A0A0S3SL68_PHAAN (Protein CLP1 homolog OS=Vigna angularis var. angularis GN=Vigan.08G008200 PE=3 SV=1)

HSP 1 Score: 778.1 bits (2008), Expect = 5.7e-222
Identity = 380/438 (86.76%), Postives = 413/438 (94.29%), Query Frame = 1


Query: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60
           MAYGG   V GS S S+++QVKL+RESELRIEVGND+PLRLRLL+G AEIFGTELPPEIW
Sbjct: 1   MAYGGAGPVGGSGSASTIKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120
           L  PPRLK AVFTW+GAT+EMDGATETDYTADETPM+ YVNVHAIL+ RRSRA+ASS DD
Sbjct: 61  LNFPPRLKFAVFTWFGATIEMDGATETDYTADETPMVSYVNVHAILDGRRSRAKASSPDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
             S+QGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 FESSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240
           E+PIDPVEGIPLEMPLVYFYGH TPSNNV+LYKVLVKEL+ ++ERQFTGNAESRA+GMVI
Sbjct: 181 EMPIDPVEGIPLEMPLVYFYGHATPSNNVELYKVLVKELSGMIERQFTGNAESRASGMVI 240

Query: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEGVGY+LLLHAI T  ANVVLVLGQEKL SMLKDVLK++P VDVVKLQ+SGGVV
Sbjct: 241 NTMGWIEGVGYDLLLHAIRTFKANVVLVLGQEKLCSMLKDVLKSEPKVDVVKLQRSGGVV 300

Query: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK RQKARSYRIREYFYG +NDLSPHSNIANFSDLF+YR+GGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKVRQKARSYRIREYFYGLSNDLSPHSNIANFSDLFVYRVGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420
           AADPTR+VPVNINRDLLHLVLAVSFAKEPDEIISSNVAGF+Y+TDIDIQRKKITYLAPS+
Sbjct: 361 AADPTRVVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFIYVTDIDIQRKKITYLAPSS 420

Query: 421 GDLPGKYLIVGTLTWIET 439
           G+LP KYLI+G+LTW+ET
Sbjct: 421 GELPSKYLIMGSLTWLET 438

[Close]

BLAST of Cp4.1LG01g23100 vs. TrEMBL
Match: A0A0L9U155_PHAAN (Protein CLP1 homolog OS=Phaseolus angularis GN=LR48_Vigan02g270300 PE=3 SV=1)

HSP 1 Score: 778.1 bits (2008), Expect = 5.7e-222
Identity = 380/438 (86.76%), Postives = 413/438 (94.29%), Query Frame = 1


Query: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60
           MAYGG   V GS S S+++QVKL+RESELRIEVGND+PLRLRLL+G AEIFGTELPPEIW
Sbjct: 1   MAYGGAGPVGGSGSASTIKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120
           L  PPRLK AVFTW+GAT+EMDGATETDYTADETPM+ YVNVHAIL+ RRSRA+ASS DD
Sbjct: 61  LNFPPRLKFAVFTWFGATIEMDGATETDYTADETPMVSYVNVHAILDGRRSRAKASSPDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
             S+QGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 FESSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240
           E+PIDPVEGIPLEMPLVYFYGH TPSNNV+LYKVLVKEL+ ++ERQFTGNAESRA+GMVI
Sbjct: 181 EMPIDPVEGIPLEMPLVYFYGHATPSNNVELYKVLVKELSGMIERQFTGNAESRASGMVI 240

Query: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEGVGY+LLLHAI T  ANVVLVLGQEKL SMLKDVLK++P VDVVKLQ+SGGVV
Sbjct: 241 NTMGWIEGVGYDLLLHAIRTFKANVVLVLGQEKLCSMLKDVLKSEPKVDVVKLQRSGGVV 300

Query: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK RQKARSYRIREYFYG +NDLSPHSNIANFSDLF+YR+GGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKVRQKARSYRIREYFYGLSNDLSPHSNIANFSDLFVYRVGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420
           AADPTR+VPVNINRDLLHLVLAVSFAKEPDEIISSNVAGF+Y+TDIDIQRKKITYLAPS+
Sbjct: 361 AADPTRVVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFIYVTDIDIQRKKITYLAPSS 420

Query: 421 GDLPGKYLIVGTLTWIET 439
           G+LP KYLI+G+LTW+ET
Sbjct: 421 GELPSKYLIMGSLTWLET 438

[Close]

BLAST of Cp4.1LG01g23100 vs. TAIR10
Match: AT3G04680.1 (AT3G04680.1 CLP-similar protein 3)

HSP 1 Score: 643.7 bits (1659), Expect = 8.5e-185
Identity = 310/444 (69.82%), Postives = 390/444 (87.84%), Query Frame = 1


Query: 1   MAYGGPA----TVAGSA-STSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTEL 60
           MAYGGP+     ++G+   +++++QVKL+RESELRIEV ++ PLRLR+++G AEIFG+EL
Sbjct: 1   MAYGGPSMNPPALSGAVPGSANLKQVKLERESELRIEV-SEEPLRLRVVNGTAEIFGSEL 60

Query: 61  PPEIWLTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARA 120
           PPEIW T PPR+K AVFTWYGAT+EMDG TETDYTADETPM+ Y+NVHAIL+ARR  A+A
Sbjct: 61  PPEIWRTFPPRMKFAVFTWYGATIEMDGVTETDYTADETPMVSYINVHAILDARRRFAKA 120

Query: 121 SSADDSGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCI 180
           S+++D  S+QGPRVIVVGPTDSGKSTL++MLLSWAAKQGW+PTFVDLD+GQGSITIPG I
Sbjct: 121 STSNDPESSQGPRVIVVGPTDSGKSTLTKMLLSWAAKQGWRPTFVDLDVGQGSITIPGSI 180

Query: 181 AATPIELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRA 240
           AA PIE+P+DPVEG PL+M LVY+YGH +P+ NV+LYK LVKELAQVLE+QF GN ESRA
Sbjct: 181 AAAPIEMPLDPVEGFPLDMALVYYYGHASPNMNVELYKALVKELAQVLEKQFVGNPESRA 240

Query: 241 AGMVINTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQK 300
           AGMVINTMGWIEG+GYELLLHAIDT NA+VVLVLGQEKL+S LKDVL++K NVDVVKL K
Sbjct: 241 AGMVINTMGWIEGIGYELLLHAIDTFNASVVLVLGQEKLFSRLKDVLRSKSNVDVVKLHK 300

Query: 301 SGGVVSRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALP 360
           SGGVV+R  + R+++R+++I+EYFYG + +LSP++N ++FSDL ++RIGGGPQAP+SALP
Sbjct: 301 SGGVVARVKEVRKRSRNFKIQEYFYGLSKELSPYANTSSFSDLQVFRIGGGPQAPKSALP 360

Query: 361 IGAEPAADPTRLVPVNI-NRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKIT 420
            G+   ++P R+ PVNI +RDLLH VLAVS+A+EPD+IISSNV+GFVY+T++++Q+KKIT
Sbjct: 361 AGSTSVSNPLRVTPVNIDDRDLLHSVLAVSYAEEPDQIISSNVSGFVYVTEVNVQKKKIT 420

Query: 421 YLAPSAGDLPGKYLIVGTLTWIET 439
           YLAPS G LP K L+ G+L W+E+
Sbjct: 421 YLAPSPGTLPSKLLVAGSLAWLES 443

[Close]

BLAST of Cp4.1LG01g23100 vs. TAIR10
Match: AT5G39930.1 (AT5G39930.1 CLP1-similar protein 5)

HSP 1 Score: 450.3 bits (1157), Expect = 1.4e-126
Identity = 226/419 (53.94%), Postives = 308/419 (73.51%), Query Frame = 1


Query: 18  VRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIWLTLPPRLKIAVFTWYGA 77
           +R+VKL+++SELRIE+   SPLRLRLL G AEIFG ELP E+W+T PP +  AVFTWYGA
Sbjct: 6   IRRVKLEKQSELRIELQPTSPLRLRLLDGKAEIFGYELPHEVWITFPPLMTFAVFTWYGA 65

Query: 78  TLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADDSGSTQGPRVIVVGPTDS 137
           T+E+DG T  +Y + ETPM+ Y+ +H  L+ +R R  +S+ D + S +GPRVI+VG  DS
Sbjct: 66  TIEIDGITGNEYISCETPMVNYLGLHNSLQVQRHRVTSSTRDSASSQEGPRVIIVGDIDS 125

Query: 138 GKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIPLEMPLV 197
           GKSTL++MLL+WA K GWKPTFVDL++GQ SITIPG IAA PI++ +DPVEG PL+  L+
Sbjct: 126 GKSTLAKMLLNWAVKDGWKPTFVDLNVGQSSITIPGTIAAAPIKMLVDPVEGFPLDKALI 185

Query: 198 YFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVINTMGWIEGVGYELLLHA 257
           +++G T PS N+ LY+ LV+ELA+ L+ +F+ NAESRA+GMVI+TMG+I   GY LLLHA
Sbjct: 186 HYFGLTNPSVNLRLYRTLVEELARELKEEFSANAESRASGMVIDTMGFIVREGYALLLHA 245

Query: 258 IDTLNANVVLVLGQ-EKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKYRQKARSYRIR 317
           I T NA++V+V+GQ EKL   LK  LK K N+ V+ L+KS GV SR++ +R+  R+  I+
Sbjct: 246 IRTFNASLVIVVGQEEKLVYDLKKNLKFKKNLQVLNLEKSEGVFSRSSDFRKTLRNSNIQ 305

Query: 318 EYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVNINRDL 377
            YFYG  NDL+ ++    FSD+ +YRIG       S      +   DP ++  V I+  L
Sbjct: 306 NYFYGVTNDLTVYTKTVKFSDVQVYRIG---DFRVSGSTSAHQRGNDPLKITLVTIDEHL 365

Query: 378 LHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSAGDLPGKYLIVGTLTW 436
           ++ VLA+S+A +PD+IISS VAGFV I ++DI  ++ITY++PSA +LP K LI+GTLTW
Sbjct: 366 VNKVLAISYAIKPDQIISSIVAGFVCIKNVDISEERITYVSPSAAELPSKILILGTLTW 421

[Close]

BLAST of Cp4.1LG01g23100 vs. TAIR10
Match: AT5G11010.2 (AT5G11010.2 Pre-mRNA cleavage complex II protein family)

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-12
Identity = 45/150 (30.00%), Postives = 75/150 (50.00%), Query Frame = 1


Query: 113 ARASSADDSGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIP 172
           + A+S+    S Q    +V GP +SGKST SR L+    ++  +  ++D D+GQ   T P
Sbjct: 16  SNAASSVSCSSLQPVIALVCGPKNSGKSTFSRNLVEVLLQRYKRVAYLDTDVGQPEFTAP 75

Query: 173 GCIAATPIE---LPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTG 232
           G ++ T ++   L  D            +FYG  +   +   Y   V  L    +  F  
Sbjct: 76  GFLSLTIVDKSILESDWTVPCVKTPERCFFYGDVSSKRDPKAYLRYVYTLFDYYQLHFCK 135

Query: 233 NAESRA-AGMVINTMGWIEGVGYELLLHAI 259
           ++E++    +VINT GW++G+GYELL+  +
Sbjct: 136 SSENKTELPLVINTPGWVKGIGYELLVDVL 165

[Close]

BLAST of Cp4.1LG01g23100 vs. TAIR10
Match: AT5G39920.1 (AT5G39920.1 Pre-mRNA cleavage complex II Clp1 (InterPro:IPR010655))

HSP 1 Score: 48.9 bits (115), Expect = 9.2e-06
Identity = 21/41 (51.22%), Postives = 29/41 (70.73%), Query Frame = 1


Query: 395 SNVAGFVYITDIDIQRKKITYLAPSAGDLPGKYLIVGTLTW 436
           S VAG V I ++DI  ++ TY++PSA +LP K  I+G LTW
Sbjct: 64  SIVAGIVCIKNVDIGEERFTYVSPSAAELPSKIFILGALTW 104

[Close]

BLAST of Cp4.1LG01g23100 vs. NCBI nr
Match: gi|449461915|ref|XP_004148687.1| (PREDICTED: protein CLP1 homolog [Cucumis sativus])

HSP 1 Score: 860.1 bits (2221), Expect = 1.6e-246
Identity = 430/438 (98.17%), Postives = 436/438 (99.54%), Query Frame = 1


Query: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60
           MAYGGPATVAGSAS SS+RQVKLDRESELRIEVG+DSPLRLRLLSGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPATVAGSASASSIRQVKLDRESELRIEVGSDSPLRLRLLSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASS+DD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSSDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
            GSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 PGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240
           ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI
Sbjct: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240

Query: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300

Query: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK+RQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420
           AADPTRLVPVNINRDLLHLVLAVSFAKEP+EIISSNVAGFVYITDIDIQRKKITYLAPSA
Sbjct: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPEEIISSNVAGFVYITDIDIQRKKITYLAPSA 420

Query: 421 GDLPGKYLIVGTLTWIET 439
           G+LPGKYLIVGTLTWIET
Sbjct: 421 GELPGKYLIVGTLTWIET 438

[Close]

BLAST of Cp4.1LG01g23100 vs. NCBI nr
Match: gi|659118770|ref|XP_008459297.1| (PREDICTED: protein CLP1 homolog [Cucumis melo])

HSP 1 Score: 855.1 bits (2208), Expect = 5.3e-245
Identity = 426/438 (97.26%), Postives = 434/438 (99.09%), Query Frame = 1


Query: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60
           MAYGGPATVAGSASTSS+RQVKLDRESELRIEVG+DSPLRLRLLSGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPATVAGSASTSSIRQVKLDRESELRIEVGSDSPLRLRLLSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILE RRSRARASS+DD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEGRRSRARASSSDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
            GSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 PGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240
           ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLV+ELAQVLERQ TGNAESRAAGMV+
Sbjct: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVRELAQVLERQLTGNAESRAAGMVV 240

Query: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300

Query: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK+RQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420
            ADPTRLVPVNINRDLLHLVLAVSFAKEP+EIISSNVAGFVYITDIDIQRKKITYLAPSA
Sbjct: 361 TADPTRLVPVNINRDLLHLVLAVSFAKEPEEIISSNVAGFVYITDIDIQRKKITYLAPSA 420

Query: 421 GDLPGKYLIVGTLTWIET 439
           G+LPGKYLIVGTLTWIET
Sbjct: 421 GELPGKYLIVGTLTWIET 438

[Close]

BLAST of Cp4.1LG01g23100 vs. NCBI nr
Match: gi|947043275|gb|KRG92999.1| (hypothetical protein GLYMA_20G242900 [Glycine max])

HSP 1 Score: 785.4 bits (2027), Expect = 5.1e-224
Identity = 382/438 (87.21%), Postives = 415/438 (94.75%), Query Frame = 1


Query: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60
           MAYGG   V GS S S+++QVKL+RESELRIEVGND+PLRLRLL+G AEIFGTELPPEIW
Sbjct: 1   MAYGGAGPVGGSGSASTIKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120
           L  PPRLK AVFTWYGAT+EMDGATETDYTADETPM+ YVNVHA+L+ RRSRA+ASS DD
Sbjct: 61  LNFPPRLKFAVFTWYGATIEMDGATETDYTADETPMVSYVNVHAVLDGRRSRAKASSPDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
           SGS+QGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 SGSSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240
           E+PIDPVEGIPLEMPLVY+YGH TPSNNV+LYKVLVKELA ++ERQFTGNAESRA+GMVI
Sbjct: 181 EMPIDPVEGIPLEMPLVYYYGHATPSNNVELYKVLVKELAGMIERQFTGNAESRASGMVI 240

Query: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEGVGY+LLLHAI T  ANVVLVLGQEKL SMLKDVLK++P VDVVKLQ+SGGVV
Sbjct: 241 NTMGWIEGVGYDLLLHAIRTFKANVVLVLGQEKLCSMLKDVLKSEPKVDVVKLQRSGGVV 300

Query: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK RQKARSYRIREYFYG +NDLSPHSNIANFSDLF+YR+GGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKVRQKARSYRIREYFYGLSNDLSPHSNIANFSDLFVYRVGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420
           AADPTR+VPVNINRDLLHLVLAVSFAKEPDEIISSNVAGF+Y+TD+DIQRKKITYLAPSA
Sbjct: 361 AADPTRVVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFIYVTDVDIQRKKITYLAPSA 420

Query: 421 GDLPGKYLIVGTLTWIET 439
           G+LP KYLI+G+LTW+ET
Sbjct: 421 GELPSKYLIMGSLTWLET 438

[Close]

BLAST of Cp4.1LG01g23100 vs. NCBI nr
Match: gi|1012335751|gb|KYP47071.1| (Protein CLP1 isogeny [Cajanus cajan])

HSP 1 Score: 780.0 bits (2013), Expect = 2.1e-222
Identity = 380/438 (86.76%), Postives = 412/438 (94.06%), Query Frame = 1


Query: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60
           MAYGG   V GS S S+++QVKL+RESELRIEVGND+PLRLRLL+G AEIFGTELPPEIW
Sbjct: 1   MAYGGAGPVGGSGSASTIKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120
           L  PPRLK AVFTWYGAT+EMDG TETDYTADETPM+ YVNVHA+L+ RRSRA+AS  DD
Sbjct: 61  LNFPPRLKFAVFTWYGATIEMDGTTETDYTADETPMVSYVNVHAVLDGRRSRAKASPPDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
           S S+QGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 SESSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240
           E+PIDPVEGIPLEMPLVYFYGH TPSNNV+LYKVLVKELA ++ERQFTGNAESRA+GMVI
Sbjct: 181 EMPIDPVEGIPLEMPLVYFYGHATPSNNVELYKVLVKELAGMIERQFTGNAESRASGMVI 240

Query: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEGVGY+LLLHAI T  ANVVLVLGQEKL SMLKDVLK++P VDVVKLQ+SGGVV
Sbjct: 241 NTMGWIEGVGYDLLLHAIRTFKANVVLVLGQEKLCSMLKDVLKSEPKVDVVKLQRSGGVV 300

Query: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK RQKARSYRIREYFYG +NDLSPHSNIANFSDLF+YR+GGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKVRQKARSYRIREYFYGLSNDLSPHSNIANFSDLFVYRVGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420
           AADPTR+VPVNINRDLLHLVLAVSFAKEPDEIISSNVAGF+Y+TDIDIQRKK+TYLAPSA
Sbjct: 361 AADPTRVVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFIYVTDIDIQRKKVTYLAPSA 420

Query: 421 GDLPGKYLIVGTLTWIET 439
           G+LP KYLI+G+LTW+ET
Sbjct: 421 GELPSKYLIMGSLTWLET 438

[Close]

BLAST of Cp4.1LG01g23100 vs. NCBI nr
Match: gi|920693328|gb|KOM36553.1| (hypothetical protein LR48_Vigan02g270300 [Vigna angularis])

HSP 1 Score: 778.1 bits (2008), Expect = 8.2e-222
Identity = 380/438 (86.76%), Postives = 413/438 (94.29%), Query Frame = 1


Query: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60
           MAYGG   V GS S S+++QVKL+RESELRIEVGND+PLRLRLL+G AEIFGTELPPEIW
Sbjct: 1   MAYGGAGPVGGSGSASTIKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120
           L  PPRLK AVFTW+GAT+EMDGATETDYTADETPM+ YVNVHAIL+ RRSRA+ASS DD
Sbjct: 61  LNFPPRLKFAVFTWFGATIEMDGATETDYTADETPMVSYVNVHAILDGRRSRAKASSPDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
             S+QGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 FESSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240
           E+PIDPVEGIPLEMPLVYFYGH TPSNNV+LYKVLVKEL+ ++ERQFTGNAESRA+GMVI
Sbjct: 181 EMPIDPVEGIPLEMPLVYFYGHATPSNNVELYKVLVKELSGMIERQFTGNAESRASGMVI 240

Query: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEGVGY+LLLHAI T  ANVVLVLGQEKL SMLKDVLK++P VDVVKLQ+SGGVV
Sbjct: 241 NTMGWIEGVGYDLLLHAIRTFKANVVLVLGQEKLCSMLKDVLKSEPKVDVVKLQRSGGVV 300

Query: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK RQKARSYRIREYFYG +NDLSPHSNIANFSDLF+YR+GGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKVRQKARSYRIREYFYGLSNDLSPHSNIANFSDLFVYRVGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420
           AADPTR+VPVNINRDLLHLVLAVSFAKEPDEIISSNVAGF+Y+TDIDIQRKKITYLAPS+
Sbjct: 361 AADPTRVVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFIYVTDIDIQRKKITYLAPSS 420

Query: 421 GDLPGKYLIVGTLTWIET 439
           G+LP KYLI+G+LTW+ET
Sbjct: 421 GELPSKYLIMGSLTWLET 438

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g23100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CLP1_ARATH	1.5e-183	69.82	Protein CLP1 homolog OS=Arabidopsis thaliana GN=CLPS3 PE=1 SV=1	[more]
CLP5_ARATH	2.4e-125	53.94	Protein CLP1 homolog 5 OS=Arabidopsis thaliana GN=CLPS5 PE=1 SV=1	[more]
CLP1_DICDI	3.3e-98	44.73	Protein CLP1 homolog OS=Dictyostelium discoideum GN=clp1 PE=3 SV=1	[more]
CLP1_CHICK	7.7e-95	42.76	Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Gallus gallus GN=CLP1 PE=2 SV=2	[more]
CLP1_NEMVE	1.0e-94	42.15	Protein CLP1 homolog OS=Nematostella vectensis GN=v1g236308 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g23100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU52_CUCSA	1.1e-246	98.17	Protein CLP1 homolog OS=Cucumis sativus GN=Csa_5G635390 PE=3 SV=1	[more]
I1NJ79_SOYBN	3.6e-224	87.21	Protein CLP1 homolog OS=Glycine max GN=GLYMA_20G242900 PE=3 SV=1	[more]
A0A151RWZ1_CAJCA	1.5e-222	86.76	Protein CLP1 isogeny OS=Cajanus cajan GN=KK1_031301 PE=3 SV=1	[more]
A0A0S3SL68_PHAAN	5.7e-222	86.76	Protein CLP1 homolog OS=Vigna angularis var. angularis GN=Vigan.08G008200 PE=3 S...	[more]
A0A0L9U155_PHAAN	5.7e-222	86.76	Protein CLP1 homolog OS=Phaseolus angularis GN=LR48_Vigan02g270300 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g23100 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04680.1	8.5e-185	69.82	CLP-similar protein 3	[more]
AT5G39930.1	1.4e-126	53.94	CLP1-similar protein 5	[more]
AT5G11010.2	2.3e-12	30.00	Pre-mRNA cleavage complex II protein family	[more]
AT5G39920.1	9.2e-06	51.22	Pre-mRNA cleavage complex II Clp1 (InterPro:IPR010655)	[more]

BLAST of Cp4.1LG01g23100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461915\|ref\|XP_004148687.1\|	1.6e-246	98.17	PREDICTED: protein CLP1 homolog [Cucumis sativus]	[more]
gi\|659118770\|ref\|XP_008459297.1\|	5.3e-245	97.26	PREDICTED: protein CLP1 homolog [Cucumis melo]	[more]
gi\|947043275\|gb\|KRG92999.1\|	5.1e-224	87.21	hypothetical protein GLYMA_20G242900 [Glycine max]	[more]
gi\|1012335751\|gb\|KYP47071.1\|	2.1e-222	86.76	Protein CLP1 isogeny [Cajanus cajan]	[more]
gi\|920693328\|gb\|KOM36553.1\|	8.2e-222	86.76	hypothetical protein LR48_Vigan02g270300 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0031124	mRNA 3'-end processing

Vocabulary: **Cellular Component**
Term	Definition
GO:0005849	mRNA cleavage factor complex

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR010655	Clp1_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031124	mRNA 3'-end processing
biological_process	GO:0006379	mRNA cleavage
biological_process	GO:0006378	mRNA polyadenylation
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation
cellular_component	GO:0005849	mRNA cleavage factor complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0051731	polynucleotide 5'-hydroxyl-kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g23100.1	Cp4.1LG01g23100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010655	Pre-mRNA cleavage complex subunit Clp1	PFAM	PF06807	Clp1	coord: 326..437 score: 1.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 129..164 score: 4.
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 127..193 score: 4.22
None	No IPR available	PANTHER	PTHR12755	CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P	coord: 18..436 score: 7.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g23100	Cucsa.158460	Cucumber (Gy14) v1	cgycpeB0425
Cp4.1LG01g23100	CmaCh04G027530	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g23100	CmoCh04G028810	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g23100	Cla010345	Watermelon (97103) v1	cpewmB381
Cp4.1LG01g23100	Csa5G635390	Cucumber (Chinese Long) v2	cpecuB415
Cp4.1LG01g23100	MELO3C021974	Melon (DHL92) v3.5.1	cpemeB358
Cp4.1LG01g23100	ClCG09G018400	Watermelon (Charleston Gray)	cpewcgB344
Cp4.1LG01g23100	CSPI05G28770	Wild cucumber (PI 183967)	cpecpiB414
Cp4.1LG01g23100	Lsi02G015000	Bottle gourd (USVL1VR-Ls)	cpelsiB336
Cp4.1LG01g23100	MELO3C021974.2	Melon (DHL92) v3.6.1	cpemedB418
Cp4.1LG01g23100	CsaV3_5G037880	Cucumber (Chinese Long) v3	cpecucB0517
Cp4.1LG01g23100	Bhi06G000359	Wax gourd	cpewgoB0502
Cp4.1LG01g23100	CsGy5G028120	Cucumber (Gy14) v2	cgybcpeB625
Cp4.1LG01g23100	Carg04395	Silver-seed gourd	carcpeB0965

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g23100	Melon (DHL92) v3.6.1	cpemedB447
Cp4.1LG01g23100	Melon (DHL92) v3.6.1	cpemedB452
Cp4.1LG01g23100	Melon (DHL92) v3.6.1	cpemedB474
Cp4.1LG01g23100	Silver-seed gourd	carcpeB0374
Cp4.1LG01g23100	Silver-seed gourd	carcpeB0509
Cp4.1LG01g23100	Cucumber (Chinese Long) v3	cpecucB0475
Cp4.1LG01g23100	Wax gourd	cpewgoB0573
Cp4.1LG01g23100	Cucurbita pepo (Zucchini)	cpecpeB199
Cp4.1LG01g23100	Cucurbita pepo (Zucchini)	cpecpeB347
Cp4.1LG01g23100	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g23100	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g23100	Melon (DHL92) v3.5.1	cpemeB386
Cp4.1LG01g23100	Cucumber (Gy14) v2	cgybcpeB064