Cp4.1LG01g22710 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g22710
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTransmembrane-like protein
LocationCp4.1LG01 : 20063751 .. 20068221 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTCCAGGAATCCAGTCAACCAGTTTCAGTCACCGTCGAATCCAGGATCGAAGAAACGACGGGCTTTGCTCACAGCCTCCGGTGAGATTTCGAAAGAAGCTTCTCTCGGACTTTTCATTCCGGCGGGACTTTCGAAACTTCCCGATCGCGTTCTATCGTCTCTTCTATTTTGCCTTTTACATTTGCTATTCCAGGTAGAGTCTCTCACCTTTTCTGTTGCCTCTCTGGATTGTAGGGATTCAATTGCTCCTTTTCATTTTACTTCTGATTAGAAGAATGCAGAATTATAATAGATTCAAGCGGGAAAAATTTCCCTCAAATTTATCATGAAATCAGTCAAATCAGTCGAGCCTACCGTATTTTCTACTTTTTCAGGATCTGGGAAGAACTATGGCATGAAATTCTGACTCTCGTATGACCACAGAGCATTACGATTCTCTTTAAAAAAAAAAAAAAAAGAAACCAAATTAGTACCTGGCTGAGTTTGAAATCCATGGGATTTTTTTTTTCCGAACTTTATTTTCACTTGTGATTTCATTTTTTCTCATGTCAATTGGTCGGTGATCATTATAGTTTACGTGCGGTTTTGAGAACGGTTATAATCCACTGTGTTTAATATTGATGATCATGTGAAAATCATAATTTTTAATCCCTTCTAGATGTCTTTGTAATGTATTTGGTTCTTAATTTTAAAGGTGGCTTGAGTTAGTTGAAATTTGAAGACTCCATTGTTGATATTCGTTGCCATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCTGCTGATGATAACGATCTTGATTATGAAGGAAGTCAATATGATCCTCGCTTTTACTATACCCCAAAAGCTTTTGACAAGATCCCGTGGAAATCCATTGCTCTTGCTCTCTTCCTGTTGCTTCTTGGGTCATTGCTTTTGTTTCTTTCGTACTTTGTATTAACTGGTCACATGGCTGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGCTTTCTAACCTTCCTCCCAGGTATTGATGAGAATTTATTTTTCATGATTTCTTGAATGTAATTCTTGTATAATTTATTTCTAGCCTTTGAGTAGGTAGGTTTATATGCGTCACCTTACGATCATCTCTCCAACCAATAGCCTGAATCTACCGATAGCATCTGCCTTTACTGTCTAAATTGTATGCTAAAGTGTCGTAGTAATGGTGTCATGATAATGATTTTGGTTTAACATGACGACAATATGGAATCCAATGGTGGCATGGTCATGTAGAACAATGACATAATGTAGAAAGGGAAATTTTGGGTCAAAGAAATTTCTAAAGCACTCCAATTGGCACAGATTGGCGGGAGAATATTTTACAAAAGAAATTGTCAATTTTATAAAAATTTTGTCAAGTTTATTAGATAACACGAAAGGATACCAAATTTCTACCTAGTAAGTTTTTTTCGAAAATTTTCTAACTTTTGGACGTTTTTCACGTGAAGAATTCGAGTTAATAGTGTCGTGTTACCAAGCTTAAGTGACTATCAATTTAATTTATTTGGTTCGAAGTGGCGTTGGCTCATCCTGCCTTAGAAGTTTGATAGTCTGAGCAACTTTTGCTTTGTCGTTGCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGGGGTGCTAATGGATATCGCTTTGCTTCCATTCCCGATTACTAGGGGTTTCTATCTCAATGGTGTATGCTTATCTCATCTCTCTTTCAATGTAAAACTATCATATGAAGTTAGAAAATTGTTTGTACAGAATTATGTCTATTGAGTTTGTAACGTATTCATCGTTTATTCCTTTTTCATAGCTTGTTTAGACTTAGAAAAACGATAATCATGAAGGTGTGATTTGTTAACTTAACAAGTCTTGTAGCTAAAACTCATGAACTCTTGTGTCCATGCAAAAACTTCAAATGAGATCATTCTATGACTAACGGAGTGGAGCAAGGTTTATGCAGGATTTGAACTTTTTTCTGGATTACTTGTGCAGAAGAGAACATAAAGACAAGGCACAGGTTGTTTCATACCAAAACACCAGATGAATGTTATCTTTGATTGATTTCTATATTTATAGTTTCTAGACTTCGATGCTCAAAAACATCGTCGATTGTTATAAACCTTTAATCGTCCTACTGCCCATATTTTAGTACAATCAAAAAAGCCAGTTGTAGATTGAAGATTTTTTAGTTTTAGCAAAGGACAAACTAAAAGATTTGTCAACTTTGTCCATAAACGGCTTGATGGGATCTCTCCAATCCCAAAAACTTTTATTTCAACAATTGATTATTTTGTTCTTCTTGGAAGCTGTCTAATGCTGGACGGCAAAGCCGAAGCAAACTACTTTAGGGGGATAAAGAGTAACCCTTTCTTGTGTGCGATTTATCTGTATTTGCACCAATTTGATTTTATAATCAAATTCTTTAGCTAAGAAGAGAGTGTAGGCTGTGTTTGGTATGTCTGCATTCTTTCCTTACACAAGAAGGGGACAGTTATTCAACGCAAGTGTGTGAACATAGGCCTAAAGAGAATATGCTNGTTGCGATATCTGTTCATCTGGGATTGGTGTTTTCTTTTATCATCATGTATTTCACATAAATCAAAGTAATGAATAAAGGAAGACTAGCAAGGTTGAAAATTAAGATGAAAATTAATGGTTTGGTGGATAAGATATGAATTTAACAATGCATCCCAATTGTTCTTCTCCATCCATGATCTATATAGATATATGGTTAATTGTTTATAAATATAAATTTTAGACTTCAGTTTTTCATTAAAGAACGAAACAGGAGGAAAAAAAAAAAAAGTCCCAGAAACCCAATTTTCTCTTTCAGGACTTCCACTTGATGATGGCGAAGACAGAGAACTCAGCTAACGAAGCAAATGGGTGGAAGATCCAGTGAACTCCAAATCGACAAGTCAACTTCACTGCTTGAAAAAGACTCCATTTCAGGTGAACAGCTTTCTTCTTTATCTTCTTCCTCCTCCATCTTCTTCTCTTTCATCACTTGCTGATACTCCTCCTCCTCTTCTTCTTCTTCTTCAACCTTCTCCTCATCTGATCTCTTTCTGTCACATGCTTTTCTCAAGCTTGCTATCATCTCAGAAGATCTCCCTCTCCCATTCCCACCATCTTTCCCAAGCTTCAATTTTAGGCATTCATTAATCCCATTAAAGGCATAGAGAGAAGCTGAAATCTTTCTCTCATATTTCATCCTTTTCATGGCTTCTCTCATCATTGAAGGTGGCTGATCATCTTCATTGATCCCGTCTGCTTCCATTGGCTCCCCTATCTCCTCTGCAATCTCAAATGGAGAGTAGTAACATGGTGGCCCAATGTCATCGAGGAAATGAAAATCCAAAACACATGATTCTTCTTCTGCTTCTTCTTGTTGGATTCCACTTTTTTCATCTCCTTCTGAGTTACTCATCTGGGTCATTCCCAACCAGTTGCCGCTCTCCATATCTCCACCGTCTGATTCATCTTTCTCAGTCAAACACGACTCAAAACTCCTACTGATTTCTTCAATATTGGGGTTGTTGGTGGTGAAAACTTCATGGTCGTTCAGCAAATCACTTAGAACTTTGTCTGTTAAACATGTTGTTGCCAATTCTTCTCTGCATCGATATTCATTTGTGTGTAAAATCCTCTCTTGCGTTGGCTGGTGTTTCTGTTCTTGATGATTATTTGGAAGATTGTTGTTATTGATGGACTTGTTTCTTGCATTCAGCCTTTGGATAAGAAGATTGGTAATCTTTGAAGGAAGGGCTGGTGATGAAGCTGATAAAGGGGAGCAAGGCCAGAAGTTGGTTCTTGTGTTGGAGCCACGGAGCAAGCAAGCTGCCTCATCATAAGCTCTAGCTGCTTCCTCCGCTGTGTCAAATGTGCCCAACCATACTCTAATCTTTTGTATGGTGTCTTTGATCTCTGCCACCCATCGCCCCGACGGTCGTTGTCGGACGCCAACGAATCGCTTTCGAGCTCTTCGAATTCCTCCTAGCTCTGCAGCCACCGCGTCCTCCTTCACCATTTCATCCCATCCCATAGCTCCTCCTTCACCGGAGCTCTTGTCTTCCTCAACTCCTTCAACAGTCTTTCTCTTTCTTGCCATTTGCTATGATTTTTGTTTTGGTTAATTGTCTTCCTCTTCCCCTTTTTAGTGCAGAAGACACTGGAAAGTTAGGATTGCTCGACTTCATCTTGAGTTGCTGTAAGTACATATTTATAAAGGGGGAAGAAGAGAAGTGCTATGGCTGGGGAATTGAAATGGTCTTTCGTGAAGTTTTGGTCCTACATTTTTGTAATTTTTAATATTGGCTTCATCTTAAGGGGCCACATGGCAGTTGATCAACAACTGCAAAACTCAAACCAGGTAAGTTAGTGATGTGATTTTTCAAGTGATTTTTCTGACTCATTCAAAAGGGTTTCTTTATGGCTTAATTAATTTCTT

mRNA sequence

GGTCCAGGAATCCAGTCAACCAGTTTCAGTCACCGTCGAATCCAGGATCGAAGAAACGACGGGCTTTGCTCACAGCCTCCGGTGAGATTTCGAAAGAAGCTTCTCTCGGACTTTTCATTCCGGCGGGACTTTCGAAACTTCCCGATCGCGTTCTATCGTCTCTTCTATTTTGCCTTTTACATTTGCTATTCCAGGTGGCTTGAGTTAGTTGAAATTTGAAGACTCCATTGTTGATATTCGTTGCCATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCTGCTGATGATAACGATCTTGATTATGAAGGAAGTCAATATGATCCTCGCTTTTACTATACCCCAAAAGCTTTTGACAAGATCCCGTGGAAATCCATTGCTCTTGCTCTCTTCCTGTTGCTTCTTGGGTCATTGCTTTTGTTTCTTTCGTACTTTGTATTAACTGGTCACATGGCTGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGCTTTCTAACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGGGGTGCTAATGGATATCGCTTTGCTTCCATTCCCGATTACTAGGGGTTTCTATCTCAATGGTGATTTGAACTTTTTTCTGGATTACTTGTGCAGAAGAGAACATAAAGACAAGGCACAGGACTTCCACTTGATGATGGCGAAGACAGAGAACTCAGCTAACGAAGCAAATGGGTGGAAGATCCAGTGAACTCCAAATCGACAAGTCAACTTCACTGCTTGAAAAAGACTCCATTTCAGCCTTTGGATAAGAAGATTGGTAATCTTTGAAGGAAGGGCTGGTGATGAAGCTGATAAAGGGGAGCAAGGCCAGAAGTTGGTTCTTGTGTTGGAGCCACGGAGCAAGCAAGCTGCCTCATCATAAGCTCTAGCTGCTTCCTCCGCTGTGTCAAATGTGCCCAACCATACTCTAATCTTTTGTATGGTGTCTTTGATCTCTGCCACCCATCGCCCCGACGGTCGTTGTCGGACGCCAACGAATCGCTTTCGAGCTCTTCGAATTCCTCCTAGCTCTGCAGCCACCGCGTCCTCCTTCACCATTTCATCCCATCCCATAGCTCCTCCTTCACCGGAGCTCTTGTCTTCCTCAACTCCTTCAACAGTCTTTCTCTTTCTTGCCATTTGCTATGATTTTTGTTTTGGTTAATTGTCTTCCTCTTCCCCTTTTTAGTGCAGAAGACACTGGAAAGTTAGGATTGCTCGACTTCATCTTGAGTTGCTGTAAGTACATATTTATAAAGGGGGAAGAAGAGAAGTGCTATGGCTGGGGAATTGAAATGGTCTTTCGTGAAGTTTTGGTCCTACATTTTTGTAATTTTTAATATTGGCTTCATCTTAAGGGGCCACATGGCAGTTGATCAACAACTGCAAAACTCAAACCAGGTAAGTTAGTGATGTGATTTTTCAAGTGATTTTTCTGACTCATTCAAAAGGGTTTCTTTATGGCTTAATTAATTTCTT

Coding sequence (CDS)

ATGGCATCTAGACGGAATGTTCGTTACAGCTCCCTTGCTGCTGATGATAACGATCTTGATTATGAAGGAAGTCAATATGATCCTCGCTTTTACTATACCCCAAAAGCTTTTGACAAGATCCCGTGGAAATCCATTGCTCTTGCTCTCTTCCTGTTGCTTCTTGGGTCATTGCTTTTGTTTCTTTCGTACTTTGTATTAACTGGTCACATGGCTGGAGAGAAATCACAAGCTTATGGTCTTTTAGCATTGGGCTTTCTAACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGGGGTGCTAATGGATATCGCTTTGCTTCCATTCCCGATTACTAG

Protein sequence

MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Homology
[Close]
BLAST of Cp4.1LG01g22710 vs. Swiss-Prot
Match: TM230_HUMAN (Transmembrane protein 230 OS=Homo sapiens GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.7e-14
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 1 

Query: 7   VRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLFLSYFVL 66
           V+YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+ L+ +   +L
Sbjct: 17  VKYSRLSSTDD------GYIDLQFKKTPP---KIPYKAIALATVLFLIGAFLIIIGSLLL 76

Query: 67  TGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           +G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  SGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]
BLAST of Cp4.1LG01g22710 vs. Swiss-Prot
Match: TM230_MOUSE (Transmembrane protein 230 OS=Mus musculus GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13
Identity = 46/112 (41.07%), Postives = 68/112 (60.71%), Query Frame = 1 

Query: 7   VRYSSLAA-DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLFLSYFV 66
           V+YS LA+ DD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLASTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGTFLIIIGSLL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]
BLAST of Cp4.1LG01g22710 vs. Swiss-Prot
Match: TM230_CHICK (Transmembrane protein 230 OS=Gallus gallus GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13
Identity = 45/112 (40.18%), Postives = 68/112 (60.71%), Query Frame = 1 

Query: 7   VRYSSLAA-DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLFLSYFV 66
           V+YS LA+ DD  +D +  +  P          KIP+K+IALA+ L ++G+ L+ +   +
Sbjct: 17  VKYSKLASTDDGYIDLQFKKSPP----------KIPYKAIALAVVLFMIGTFLIIIGALL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LAGYISKGGTDRAIPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]
BLAST of Cp4.1LG01g22710 vs. Swiss-Prot
Match: TM230_PONAB (Transmembrane protein 230 OS=Pongo abelii GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 1 

Query: 7   VRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLFLSYFVL 66
           V+YS L++ D+         D +F  TP    KIP+K+IALA  L L+G+ L+ +   +L
Sbjct: 17  VKYSRLSSTDD------GYIDLQFKKTPP---KIPYKAIALATGLFLIGAFLIIIGSLLL 76

Query: 67  TGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           +G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  SGYISKGGADRAIPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]
BLAST of Cp4.1LG01g22710 vs. Swiss-Prot
Match: TM230_RAT (Transmembrane protein 230 OS=Rattus norvegicus GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.5e-13
Identity = 45/112 (40.18%), Postives = 68/112 (60.71%), Query Frame = 1 

Query: 7   VRYSSLAA-DDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLFLSYFV 66
           V+YS L++ DD  +D +  +  P          KIP+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLSSTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGTFLIIIGSLL 76

Query: 67  LTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]
BLAST of Cp4.1LG01g22710 vs. TrEMBL
Match: A0A0A0KXG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G637760 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.2e-55
Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 1 

Query: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60
           MASRRNVRYS L +DDND+D EG+Q DPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]
BLAST of Cp4.1LG01g22710 vs. TrEMBL
Match: A0A061EGM6_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_018661 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 9.3e-47
Identity = 96/117 (82.05%), Postives = 104/117 (88.89%), Query Frame = 1 

Query: 1   MASRRNVRYSSLAADDNDLDY-EGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLL 60
           M+SRR+VRYS LA D+ND D  EG +YDPRF YTPKAFDKIPWKSIALA+ LL LGSLLL
Sbjct: 1   MSSRRHVRYSPLAGDENDYDANEGRRYDPRFDYTPKAFDKIPWKSIALAVILLCLGSLLL 60

Query: 61  FLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           FLS+F+LTGHM GEKSQAYGLL LG LTFLPGFYETRIAYY+WRGA GYRFASIPDY
Sbjct: 61  FLSFFILTGHMGGEKSQAYGLLILGILTFLPGFYETRIAYYSWRGAEGYRFASIPDY 117

[Close]
BLAST of Cp4.1LG01g22710 vs. TrEMBL
Match: M5WT10_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013579mg PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.5e-44
Identity = 94/116 (81.03%), Postives = 98/116 (84.48%), Query Frame = 1 

Query: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60
           MASRR  RYS LA D+ND D  G   DPRF YTPK+FDKIPWKSI LALFLL LGSLLLF
Sbjct: 1   MASRRYARYSPLATDEND-DVYGKPNDPRFSYTPKSFDKIPWKSILLALFLLFLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYF+ TGHM G+ SQAYGLLALG LTFLPGFYETRIAYYAWRGA GYRFASIPDY
Sbjct: 61  LSYFIFTGHMGGDLSQAYGLLALGILTFLPGFYETRIAYYAWRGAKGYRFASIPDY 115

[Close]
BLAST of Cp4.1LG01g22710 vs. TrEMBL
Match: A0A0J8CE30_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115650 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 7.4e-44
Identity = 91/124 (73.39%), Postives = 100/124 (80.65%), Query Frame = 1 

Query: 1   MASRRNVRYSSLAADD--------NDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLL 60
           MASRRNV+YS LA D+        ND   +G QYDPRF YTPK  DK+PWKSI LALFLL
Sbjct: 1   MASRRNVKYSRLATDEDDGGQIYSNDAHIKGRQYDPRFDYTPKCLDKVPWKSILLALFLL 60

Query: 61  LLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFAS 117
            LGSLLLFLS+F+LTGHM GE+SQ YGL ALG LTFLPGFYETRIAYY+WRGA GYRFA+
Sbjct: 61  FLGSLLLFLSFFILTGHMGGERSQGYGLFALGLLTFLPGFYETRIAYYSWRGAAGYRFAA 120

[Close]
BLAST of Cp4.1LG01g22710 vs. TrEMBL
Match: A0A067JT97_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19885 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.1e-43
Identity = 89/117 (76.07%), Postives = 100/117 (85.47%), Query Frame = 1 

Query: 1   MASRRNVRYSSLAADDNDLD-YEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLL 60
           MA+RR VRY+ L  DDND D   GS++DPRF Y P A+D+IPWKSIALALFLL LGSLLL
Sbjct: 23  MAARRGVRYTPLPVDDNDYDGVGGSRHDPRFEYRPGAYDRIPWKSIALALFLLFLGSLLL 82

Query: 61  FLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           FLS+F+LTGHM G+KSQ YGLLALGFL FLPGFYETRIAYY+WRGA GYRFA+IP Y
Sbjct: 83  FLSFFILTGHMGGDKSQGYGLLALGFLAFLPGFYETRIAYYSWRGAKGYRFAAIPSY 139

[Close]
BLAST of Cp4.1LG01g22710 vs. TAIR10
Match: AT3G29170.1 (AT3G29170.1 Eukaryotic protein of unknown function (DUF872))

HSP 1 Score: 165.2 bits (417), Expect = 2.3e-41
Identity = 80/121 (66.12%), Postives = 94/121 (77.69%), Query Frame = 1 

Query: 1   MASRRNVRYSSLAADDNDLDY-----EGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLG 60
           MASRR+VRY+ L  D++D  Y     E   +DPRF Y+PKAFD++PWKSIALA+FLL LG
Sbjct: 1   MASRRSVRYAQLPGDEDDEGYGNGVGERRDFDPRFDYSPKAFDRVPWKSIALAVFLLFLG 60

Query: 61  SLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPD 117
            LLL LS+F+  GHM G+ SQ Y LL LG LTFLPGFYETRIAYY+WRGA GYRFA+IP 
Sbjct: 61  CLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPGFYETRIAYYSWRGAEGYRFAAIPS 120

[Close]
BLAST of Cp4.1LG01g22710 vs. TAIR10
Match: AT2G19350.1 (AT2G19350.1 Eukaryotic protein of unknown function (DUF872))

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 1 

Query: 41  PWKSIALALFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY 100
           P K I+LA+ LL+ G+L + L +F+    + G++      + LG L F+PGFY TRIAYY
Sbjct: 28  PVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGDRGHGIFFIVLGCLLFIPGFYYTRIAYY 87

Query: 101 AWRGANGYRFASIP 115
           A++G  G+ F++IP
Sbjct: 88  AYKGYKGFSFSNIP 101

[Close]
BLAST of Cp4.1LG01g22710 vs. TAIR10
Match: AT4G29850.1 (AT4G29850.1 Eukaryotic protein of unknown function (DUF872))

HSP 1 Score: 65.5 bits (158), Expect = 2.5e-11
Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 1 

Query: 41  PWKSIALALFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY 100
           P K IALA+ LL+ G+L +   +F+    + G++      + LG L F+PGFY TRIAYY
Sbjct: 28  PVKEIALAVALLVFGTLGIVSGFFMAYNRVGGDRGHGIFFIVLGCLLFIPGFYYTRIAYY 87

Query: 101 AWRGANGYRFASIP 115
           A++G  G+ F++IP
Sbjct: 88  AYKGYKGFSFSNIP 101

[Close]
BLAST of Cp4.1LG01g22710 vs. NCBI nr
Match: gi|659118865|ref|XP_008459349.1| (PREDICTED: transmembrane protein 230 [Cucumis melo])

HSP 1 Score: 226.1 bits (575), Expect = 3.2e-56
Identity = 109/116 (93.97%), Postives = 115/116 (99.14%), Query Frame = 1 

Query: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60
           MASRRN+RYSSLA+DDND+D EGS++DPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]
BLAST of Cp4.1LG01g22710 vs. NCBI nr
Match: gi|449447392|ref|XP_004141452.1| (PREDICTED: transmembrane protein 230 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 6.0e-55
Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 1 

Query: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60
           MASRRNVRYS L +DDND+D EG+Q DPRFYYTPKAFDKIPWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRNVRYSPLTSDDNDIDSEGNQSDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]
BLAST of Cp4.1LG01g22710 vs. NCBI nr
Match: gi|590650306|ref|XP_007032621.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-46
Identity = 96/117 (82.05%), Postives = 104/117 (88.89%), Query Frame = 1 

Query: 1   MASRRNVRYSSLAADDNDLDY-EGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLL 60
           M+SRR+VRYS LA D+ND D  EG +YDPRF YTPKAFDKIPWKSIALA+ LL LGSLLL
Sbjct: 1   MSSRRHVRYSPLAGDENDYDANEGRRYDPRFDYTPKAFDKIPWKSIALAVILLCLGSLLL 60

Query: 61  FLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           FLS+F+LTGHM GEKSQAYGLL LG LTFLPGFYETRIAYY+WRGA GYRFASIPDY
Sbjct: 61  FLSFFILTGHMGGEKSQAYGLLILGILTFLPGFYETRIAYYSWRGAEGYRFASIPDY 117

[Close]
BLAST of Cp4.1LG01g22710 vs. NCBI nr
Match: gi|658035790|ref|XP_008353428.1| (PREDICTED: transmembrane protein 230-like [Malus domestica])

HSP 1 Score: 189.5 bits (480), Expect = 3.3e-45
Identity = 96/116 (82.76%), Postives = 101/116 (87.07%), Query Frame = 1 

Query: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60
           MASRRNVRYS LA DD+D+   GS  DPRF YTPK+FDKIPWKSI LALFLL LGSLLLF
Sbjct: 1   MASRRNVRYSPLATDDDDV--YGSPNDPRFDYTPKSFDKIPWKSIVLALFLLSLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYF+ TGHM GE +QAYGLLALG LTFLPGFYETRIAYYAWRGA GYRFASIPDY
Sbjct: 61  LSYFIFTGHMGGELAQAYGLLALGXLTFLPGFYETRIAYYAWRGAXGYRFASIPDY 114

[Close]
BLAST of Cp4.1LG01g22710 vs. NCBI nr
Match: gi|1009125764|ref|XP_015879786.1| (PREDICTED: transmembrane protein 230 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 189.1 bits (479), Expect = 4.3e-45
Identity = 92/116 (79.31%), Postives = 103/116 (88.79%), Query Frame = 1 

Query: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60
           MA++RNV+YS L  D+ D+ Y+GSQ D RF Y+PKAFDK+PWKSIALALFLL LGSLLLF
Sbjct: 1   MATKRNVQYSRLPTDE-DIGYDGSQSDTRFDYSPKAFDKVPWKSIALALFLLCLGSLLLF 60

Query: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 117
           LSYF+ TGHM GE+SQAYGLLALG LTFLPGFYETRIAYY+WRGA GYRFASIPDY
Sbjct: 61  LSYFIFTGHMGGERSQAYGLLALGILTFLPGFYETRIAYYSWRGAKGYRFASIPDY 115

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g22710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TM230_HUMAN8.7e-1441.44Transmembrane protein 230 OS=Homo sapiens GN=TMEM230 PE=1 SV=1[more]
TM230_MOUSE1.1e-1341.07Transmembrane protein 230 OS=Mus musculus GN=Tmem230 PE=1 SV=1[more]
TM230_CHICK1.1e-1340.18Transmembrane protein 230 OS=Gallus gallus GN=TMEM230 PE=2 SV=1[more]
TM230_PONAB1.5e-1341.44Transmembrane protein 230 OS=Pongo abelii GN=TMEM230 PE=2 SV=1[more]
TM230_RAT2.5e-1340.18Transmembrane protein 230 OS=Rattus norvegicus GN=Tmem230 PE=1 SV=1[more]
BLAST of Cp4.1LG01g22710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXG1_CUCSA4.2e-5593.10Uncharacterized protein OS=Cucumis sativus GN=Csa_5G637760 PE=4 SV=1[more]
A0A061EGM6_THECC9.3e-4782.05Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_018661 PE=4 SV=1[more]
M5WT10_PRUPE1.5e-4481.03Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013579mg PE=4 SV=1[more]
A0A0J8CE30_BETVU7.4e-4473.39Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115650 PE=4 S... [more]
A0A067JT97_JATCU2.1e-4376.07Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19885 PE=4 SV=1[more]
BLAST of Cp4.1LG01g22710 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G29170.12.3e-4166.12 Eukaryotic protein of unknown function (DUF872)[more]
AT2G19350.11.5e-1143.24 Eukaryotic protein of unknown function (DUF872)[more]
AT4G29850.12.5e-1143.24 Eukaryotic protein of unknown function (DUF872)[more]
BLAST of Cp4.1LG01g22710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118865|ref|XP_008459349.1|3.2e-5693.97PREDICTED: transmembrane protein 230 [Cucumis melo][more]
gi|449447392|ref|XP_004141452.1|6.0e-5593.10PREDICTED: transmembrane protein 230 [Cucumis sativus][more]
gi|590650306|ref|XP_007032621.1|1.3e-4682.05Uncharacterized protein isoform 1 [Theobroma cacao][more]
gi|658035790|ref|XP_008353428.1|3.3e-4582.76PREDICTED: transmembrane protein 230-like [Malus domestica][more]
gi|1009125764|ref|XP_015879786.1|4.3e-4579.31PREDICTED: transmembrane protein 230 isoform X2 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008590DUF872_TM
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g22710.1Cp4.1LG01g22710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008590Protein of unknown function DUF872, transmembranePFAMPF05915DUF872coord: 9..116
score: 4.7
NoneNo IPR availablePANTHERPTHR15664C20ORF30 PROTEINcoord: 1..116
score: 6.2
NoneNo IPR availablePANTHERPTHR15664:SF3SUBFAMILY NOT NAMEDcoord: 1..116
score: 6.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g22710CmaCh04G027840Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g22710CmoCh15G002610Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g22710CmoCh04G029120Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g22710Cla010306Watermelon (97103) v1cpewmB381
Cp4.1LG01g22710Csa5G637760Cucumber (Chinese Long) v2cpecuB415
Cp4.1LG01g22710ClCG09G017950Watermelon (Charleston Gray)cpewcgB344
Cp4.1LG01g22710CsaV3_5G038280Cucumber (Chinese Long) v3cpecucB0517
Cp4.1LG01g22710CsGy5G028570Cucumber (Gy14) v2cgybcpeB625
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g22710Cp4.1LG13g08160Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g22710Melon (DHL92) v3.6.1cpemedB418
Cp4.1LG01g22710Melon (DHL92) v3.6.1cpemedB455
Cp4.1LG01g22710Melon (DHL92) v3.6.1cpemedB474
Cp4.1LG01g22710Silver-seed gourdcarcpeB0070
Cp4.1LG01g22710Silver-seed gourdcarcpeB0374
Cp4.1LG01g22710Silver-seed gourdcarcpeB0612
Cp4.1LG01g22710Silver-seed gourdcarcpeB0965
Cp4.1LG01g22710Cucumber (Chinese Long) v3cpecucB0472
Cp4.1LG01g22710Cucumber (Chinese Long) v3cpecucB0495
Cp4.1LG01g22710Wax gourdcpewgoB0502
Cp4.1LG01g22710Wax gourdcpewgoB0552
Cp4.1LG01g22710Cucurbita pepo (Zucchini)cpecpeB391
Cp4.1LG01g22710Cucurbita pepo (Zucchini)cpecpeB397
Cp4.1LG01g22710Cucumber (Gy14) v1cgycpeB0255
Cp4.1LG01g22710Cucumber (Gy14) v1cgycpeB0425
Cp4.1LG01g22710Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g22710Cucurbita maxima (Rimu)cmacpeB479
Cp4.1LG01g22710Cucurbita moschata (Rifu)cmocpeB437
Cp4.1LG01g22710Wild cucumber (PI 183967)cpecpiB380
Cp4.1LG01g22710Wild cucumber (PI 183967)cpecpiB414
Cp4.1LG01g22710Cucumber (Chinese Long) v2cpecuB380
Cp4.1LG01g22710Bottle gourd (USVL1VR-Ls)cpelsiB330
Cp4.1LG01g22710Bottle gourd (USVL1VR-Ls)cpelsiB336
Cp4.1LG01g22710Watermelon (Charleston Gray)cpewcgB387
Cp4.1LG01g22710Watermelon (97103) v1cpewmB449
Cp4.1LG01g22710Melon (DHL92) v3.5.1cpemeB358
Cp4.1LG01g22710Melon (DHL92) v3.5.1cpemeB391
Cp4.1LG01g22710Cucumber (Gy14) v2cgybcpeB001