Cp4.1LG01g21920 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g21920
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLaccase
LocationCp4.1LG01 : 20573988 .. 20575631 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTCTATGGTGGCATGCACATAGCTCATGGCTTCGCGCCACGGTTTATGGAGCCTTAATCATCCGCCCTAGACAGGGAGATTCCTACCCTTTTCCCAAGCCAAACCGCGAAGCAATACTGCTAATGGGTAATTATAAGTTTCATTACGTTATATAATTACATTAAACCATAATTAATCGCTCGACATAAATACAAAACATTATTTTTTAAATTTATTTATTTATTTTGGATTATTAGGCGAGTGGTGGGATGCAAACCCCATTGACGTAGTGAGACAGGCCACAAGAACGGGAGCGGCTCCCAATGTCTCTGATGCTTTCACTTTCAATGGTCAACCCGGTGACCTTTACAAGTGCTCTAGCCGAGGTGAATTTTGTAATTTCACGATATATATTTTAATATTTTCTCAATTATGAATATTAGAAATGTAATTAAATGATATTCGGTTGTGTATAATGATTATGCAGATACTGTAATTGTGCCTATCGATTCCGGCGAGACCAATTTGCTGAGAGTGGTGAACTCCGGCCTGAACCAGCCGCTTTTTTTCACGGTGGCGAACCACAAACTGACGGTGGTTGGAGCCGACGCTTCCTACACAAAGCCCTTCACAACCTCTGTTTTGATGCTCGGCCCTGGCCAAACCACCGACGTTTTAATCTCCGGCGATCAGGTCCCTTCCCGGTACTACATAGCGGCACGTGCGTACCAAAGCGCTCAAAATGCACCGTTTGACAACACCACCACGACTGCCATTCTCAACTACAAATCTGCCCCTTGCTCCGCCAAGAAAGGCGGCGTGTCGATTAAACCACTCATGCCTCCGCTCCCTGCCTACAACGACACCGCCACCGTCACCGCCTTCAGCCGGAGTTTTCGTAGCCCTCGACCCGTCCCAGTCCCGAAGGAAATCGACGAGAATCTGTTCTTCACCATCGGATTGGGACTCAACAATTGCCCACGTAATTTCAAACCCAGCCAATGCCAAGGCCCCAACGGAACCCGCTTCACAGCCAGTATGAACAATGTCTCATTCCTACTTCCTTCCAACATCTCAATTCTTCAAGCCTTCCAACAGAGGATTCCCAGCGTCATCACCCCTGATTTCCCGGCCAACCCGCCGGTGAAATTCGATTACACCGGCAACGTCAGCCAATCGCTTTTTCAACCGATTCCCGGTACTAAAGGTTACAGATTAAAATACGGGTCGACAGTACAAGTCGTGTTACAAGACACTAGCATTGTAACGCCTGAAAATCACCCGATTCATCTCCATGGTTACGATTTTTACATCATCGCCGAGGGATTTGGGAATTTCAACCCCACAACTGATACTAAAAAATTCAACCTCGTTGACCCTCCTCTTAGAAACACCGTCGCCGTCCCCGTCAACGGCTGGGCCGTCATCCGATTCGTCGCCGATAACCCAGGTAATAATTTTTTAAATAAAAACAAATTAAAATTCTTCTTTTATTCCAAGTTTTATTAAATTCTTTTATGATTTTTGATTTATTAGGTGCTTGGATAATGCATTGTCACTTGGACGTGCATATCACGTGGGGGTTGGCGATGGTGTTTCTGGTGGATAATGGAGTGGGACATCTGCAGTCAATAGAGTCGCCGCCGCCGGATCTCCCGATATGC

mRNA sequence

ACTCTATGGTGGCATGCACATAGCTCATGGCTTCGCGCCACGGTTTATGGAGCCTTAATCATCCGCCCTAGACAGGGAGATTCCTACCCTTTTCCCAAGCCAAACCGCGAAGCAATACTGCTAATGGGCGAGTGGTGGGATGCAAACCCCATTGACGTAGTGAGACAGGCCACAAGAACGGGAGCGGCTCCCAATGTCTCTGATGCTTTCACTTTCAATGGTCAACCCGGTGACCTTTACAAGTGCTCTAGCCGAGGTGCTTGGATAATGCATTGTCACTTGGACGTGCATATCACGTGGGGGTTGGCGATGGTGTTTCTGGTGGATAATGGAGTGGGACATCTGCAGTCAATAGAGTCGCCGCCGCCGGATCTCCCGATATGC

Coding sequence (CDS)

ACTCTATGGTGGCATGCACATAGCTCATGGCTTCGCGCCACGGTTTATGGAGCCTTAATCATCCGCCCTAGACAGGGAGATTCCTACCCTTTTCCCAAGCCAAACCGCGAAGCAATACTGCTAATGGGCGAGTGGTGGGATGCAAACCCCATTGACGTAGTGAGACAGGCCACAAGAACGGGAGCGGCTCCCAATGTCTCTGATGCTTTCACTTTCAATGGTCAACCCGGTGACCTTTACAAGTGCTCTAGCCGAGGTGCTTGGATAATGCATTGTCACTTGGACGTGCATATCACGTGGGGGTTGGCGATGGTGTTTCTGGTGGATAATGGAGTGGGACATCTGCAGTCAATAGAGTCGCCGCCGCCGGATCTCCCGATATGC

Protein sequence

TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRTGAAPNVSDAFTFNGQPGDLYKCSSRGAWIMHCHLDVHITWGLAMVFLVDNGVGHLQSIESPPPDLPIC
Homology
[Close]
BLAST of Cp4.1LG01g21920 vs. Swiss-Prot
Match: LAC12_ARATH (Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.3e-38
Identity = 64/85 (75.29%), Postives = 76/85 (89.41%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHSSWLRATVYGALII P  G S+PFPKP+R+  L++GEWW+ANP+DV+ QATRT
Sbjct: 123 TLWWHAHSSWLRATVYGALIIHPTPGSSFPFPKPDRQTALMLGEWWNANPVDVINQATRT 182

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSR 86
           GAAPN+SDA+T NGQPGDLY CS++
Sbjct: 183 GAAPNISDAYTINGQPGDLYNCSTK 207

[Close]
BLAST of Cp4.1LG01g21920 vs. Swiss-Prot
Match: LAC3_ORYSJ (Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.8e-36
Identity = 64/83 (77.11%), Postives = 73/83 (87.95%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHSSWLRATVYGALIIRPR+  +YPF KP RE  L++GEWWDA+PI V+R+A RT
Sbjct: 123 TLWWHAHSSWLRATVYGALIIRPRENKTYPFEKPAREVPLILGEWWDADPIQVIREAQRT 182

Query: 61  GAAPNVSDAFTFNGQPGDLYKCS 84
           GAAPN+SDA+T NGQPGDLY CS
Sbjct: 183 GAAPNISDAYTINGQPGDLYNCS 205

[Close]
BLAST of Cp4.1LG01g21920 vs. Swiss-Prot
Match: LAC5_ARATH (Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-35
Identity = 62/90 (68.89%), Postives = 75/90 (83.33%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHSSWLRATVYG+L++ P  G SYPF KP+R   LL+GEWWDANP+DV+R++ RT
Sbjct: 125 TLWWHAHSSWLRATVYGSLLVFPPAGSSYPFTKPHRNVPLLLGEWWDANPVDVLRESIRT 184

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRGAWIM 91
           G APN SDA+T NGQPGDLYKCSS+   ++
Sbjct: 185 GGAPNNSDAYTINGQPGDLYKCSSQDTTVV 214

[Close]
BLAST of Cp4.1LG01g21920 vs. Swiss-Prot
Match: LAC17_ORYSJ (Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 7.6e-35
Identity = 67/86 (77.91%), Postives = 73/86 (84.88%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFP-KPNRE-AILLMGEWWDANPIDVVRQAT 60
           TLWWHAHSSWLRATVYGAL+IRPR G SYPF  +P RE A +L+GEWWD NP+DVVR AT
Sbjct: 121 TLWWHAHSSWLRATVYGALLIRPRDGTSYPFDVQPTRELAPILLGEWWDMNPVDVVRAAT 180

Query: 61  RTGAAPNVSDAFTFNGQPGDLYKCSS 85
           RTGAAPN+SDA T N QPGDLY CSS
Sbjct: 181 RTGAAPNISDALTVNAQPGDLYSCSS 206

[Close]
BLAST of Cp4.1LG01g21920 vs. Swiss-Prot
Match: LAC23_ORYSJ (Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 9.9e-35
Identity = 67/86 (77.91%), Postives = 73/86 (84.88%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFP-KPNRE-AILLMGEWWDANPIDVVRQAT 60
           TLWWHAHSSWLRATVYGAL+IRPR G SYPF  +P RE A +L+GEWWD NP+DVVR AT
Sbjct: 121 TLWWHAHSSWLRATVYGALLIRPRDGTSYPFHVQPTRELAPILLGEWWDMNPVDVVRAAT 180

Query: 61  RTGAAPNVSDAFTFNGQPGDLYKCSS 85
           RTGAAPN+SDA T N QPGDLY CSS
Sbjct: 181 RTGAAPNISDALTVNAQPGDLYSCSS 206

[Close]
BLAST of Cp4.1LG01g21920 vs. TrEMBL
Match: A0A0A0K8M4_CUCSA (Laccase OS=Cucumis sativus GN=Csa_6G012820 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.3e-43
Identity = 79/90 (87.78%), Postives = 86/90 (95.56%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHSSWLRATVYGALIIRPR+G+SYPFPKP+REA LLMGEWWDANPIDVVRQATRT
Sbjct: 82  TLWWHAHSSWLRATVYGALIIRPREGESYPFPKPHREATLLMGEWWDANPIDVVRQATRT 141

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRGAWIM 91
           GAAPN+SDA+TFNGQPGDLYKCSS+   I+
Sbjct: 142 GAAPNISDAYTFNGQPGDLYKCSSKDTIIV 171

[Close]
BLAST of Cp4.1LG01g21920 vs. TrEMBL
Match: A0A103XNP2_CYNCS (Cupredoxin (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_003833 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 9.0e-43
Identity = 77/128 (60.16%), Postives = 92/128 (71.88%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHS WLR+TVYGAL+IRP+ G SYPFP P  E  +++GEWWD   I V+RQA  T
Sbjct: 60  TLWWHAHSRWLRSTVYGALVIRPKSGSSYPFPNPKIEFPVVLGEWWDRKVISVLRQALFT 119

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRGAWIMHCHLDVHITWGLAMVFLVDNGVGHLQSIES 120
           GAAPNVSDA T NGQP         G W+MHCH+D H+ WG AM F+V+NGVG  +++  
Sbjct: 120 GAAPNVSDALTINGQP---------GVWLMHCHIDTHLAWGFAMSFIVENGVGESETLLP 178

Query: 121 PPPDLPIC 129
           PP DLP C
Sbjct: 180 PPSDLPQC 178

[Close]
BLAST of Cp4.1LG01g21920 vs. TrEMBL
Match: B8AZ35_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20213 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 5.8e-42
Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAH SWLRATV+G ++I P  G  YPFP P+ E  ++ GEWW+ +   V+ QA +T
Sbjct: 45  TLWWHAHISWLRATVHGPMVILPPAGVGYPFPAPHEEVPIMFGEWWNNDTEAVISQALQT 104

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRGAWIMHCHLDVHITWGLAMVFLVDNGVGHLQSIES 120
           G  PN+SDA+T NG PG LY CS++G WIMHCHLDVH++WGL+M +LV++G    Q +  
Sbjct: 105 GGGPNISDAYTLNGLPGPLYNCSAQGVWIMHCHLDVHLSWGLSMAWLVNDGPLPNQKLPP 164

Query: 121 PPPDLPIC 129
           PP D+P+C
Sbjct: 165 PPSDIPMC 172

[Close]
BLAST of Cp4.1LG01g21920 vs. TrEMBL
Match: Q8L4Y3_SOYBN (Laccase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-40
Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHSSWLRATVYGALIIRPR+G+ YPFPKP RE  +L+GEWWDANPIDVVRQATRT
Sbjct: 133 TLWWHAHSSWLRATVYGALIIRPREGEPYPFPKPKRETPILLGEWWDANPIDVVRQATRT 192

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRGAWIMHCH 94
           G APNVSDA+T NGQPGDLYKCSS+   I+  H
Sbjct: 193 GGAPNVSDAYTINGQPGDLYKCSSKDTTIVPIH 225

[Close]
BLAST of Cp4.1LG01g21920 vs. TrEMBL
Match: A0A0K9S221_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003940 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-40
Identity = 68/128 (53.12%), Postives = 94/128 (73.44%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAH SWLRATVYGA++I P++G S+PFP+P+ EA L++GEWW+ +   +V+Q  + 
Sbjct: 128 TLWWHAHISWLRATVYGAIVIMPKEGTSFPFPQPHMEANLVLGEWWNGDVETLVKQGDQM 187

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRGAWIMHCHLDVHITWGLAMVFLVDNGVGHLQSIES 120
           G  PN+SDA T NG+PG ++ CS +  W MHCHL++H  WGL + F+V++G G   S+  
Sbjct: 188 GLPPNISDAHTINGKPGPMFPCSEKRVWFMHCHLELHTGWGLKIAFVVEDGPGPEYSVLP 247

Query: 121 PPPDLPIC 129
           PP DLP C
Sbjct: 248 PPKDLPPC 255

[Close]
BLAST of Cp4.1LG01g21920 vs. TAIR10
Match: AT5G05390.1 (AT5G05390.1 laccase 12)

HSP 1 Score: 159.1 bits (401), Expect = 1.8e-39
Identity = 64/85 (75.29%), Postives = 76/85 (89.41%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHSSWLRATVYGALII P  G S+PFPKP+R+  L++GEWW+ANP+DV+ QATRT
Sbjct: 123 TLWWHAHSSWLRATVYGALIIHPTPGSSFPFPKPDRQTALMLGEWWNANPVDVINQATRT 182

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSR 86
           GAAPN+SDA+T NGQPGDLY CS++
Sbjct: 183 GAAPNISDAYTINGQPGDLYNCSTK 207

[Close]
BLAST of Cp4.1LG01g21920 vs. TAIR10
Match: AT2G40370.1 (AT2G40370.1 laccase 5)

HSP 1 Score: 150.6 bits (379), Expect = 6.6e-37
Identity = 62/90 (68.89%), Postives = 75/90 (83.33%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHSSWLRATVYG+L++ P  G SYPF KP+R   LL+GEWWDANP+DV+R++ RT
Sbjct: 125 TLWWHAHSSWLRATVYGSLLVFPPAGSSYPFTKPHRNVPLLLGEWWDANPVDVLRESIRT 184

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRGAWIM 91
           G APN SDA+T NGQPGDLYKCSS+   ++
Sbjct: 185 GGAPNNSDAYTINGQPGDLYKCSSQDTTVV 214

[Close]
BLAST of Cp4.1LG01g21920 vs. TAIR10
Match: AT2G30210.1 (AT2G30210.1 laccase 3)

HSP 1 Score: 143.3 bits (360), Expect = 1.0e-34
Identity = 61/86 (70.93%), Postives = 69/86 (80.23%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHS WLRATVYGALII PR G  YPF  P R+  +L+GEWWD NP+DV++QA  T
Sbjct: 124 TLWWHAHSRWLRATVYGALIIYPRLGSPYPFSMPKRDIPILLGEWWDRNPMDVLKQAQFT 183

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRG 87
           GAA NVSDA+T NGQPGDLY+CS  G
Sbjct: 184 GAAANVSDAYTINGQPGDLYRCSRAG 209

[Close]
BLAST of Cp4.1LG01g21920 vs. TAIR10
Match: AT5G07130.1 (AT5G07130.1 laccase 13)

HSP 1 Score: 138.3 bits (347), Expect = 3.4e-33
Identity = 63/87 (72.41%), Postives = 69/87 (79.31%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPR-QGDSYPFPK-PNREAILLMGEWWDANPIDVVRQAT 60
           TLWWHAHS WLRATVYGALIIRP      YPFP  P RE  LL+GEWWD NP+DV+  A 
Sbjct: 120 TLWWHAHSRWLRATVYGALIIRPPLSSPHYPFPVIPKREITLLLGEWWDRNPMDVLNLAQ 179

Query: 61  RTGAAPNVSDAFTFNGQPGDLYKCSSR 86
            TGAAPN+SDAFT NGQPGDLY+CSS+
Sbjct: 180 FTGAAPNISDAFTINGQPGDLYRCSSQ 206

[Close]
BLAST of Cp4.1LG01g21920 vs. TAIR10
Match: AT3G09220.1 (AT3G09220.1 laccase 7)

HSP 1 Score: 125.6 bits (314), Expect = 2.3e-29
Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAH+S+LRATVYGAL+IRP+ G SYPFPKP++E  +L GEWW+ + + +   A  T
Sbjct: 122 TLWWHAHASFLRATVYGALVIRPKSGHSYPFPKPHKEVPILFGEWWNTDVVALEEAAIAT 181

Query: 61  GAAPNVSDAFTFNGQPGDLYKCS 84
           G  PN SDA+T NG+PG+LY CS
Sbjct: 182 GVPPNNSDAYTINGRPGNLYPCS 204

[Close]
BLAST of Cp4.1LG01g21920 vs. NCBI nr
Match: gi|449441284|ref|XP_004138412.1| (PREDICTED: laccase-12-like [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 7.6e-43
Identity = 79/90 (87.78%), Postives = 86/90 (95.56%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHSSWLRATVYGALIIRPR+G+SYPFPKP+REA LLMGEWWDANPIDVVRQATRT
Sbjct: 126 TLWWHAHSSWLRATVYGALIIRPREGESYPFPKPHREATLLMGEWWDANPIDVVRQATRT 185

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRGAWIM 91
           GAAPN+SDA+TFNGQPGDLYKCSS+   I+
Sbjct: 186 GAAPNISDAYTFNGQPGDLYKCSSKDTIIV 215

[Close]
BLAST of Cp4.1LG01g21920 vs. NCBI nr
Match: gi|700190604|gb|KGN45808.1| (hypothetical protein Csa_6G012820 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 7.6e-43
Identity = 79/90 (87.78%), Postives = 86/90 (95.56%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHSSWLRATVYGALIIRPR+G+SYPFPKP+REA LLMGEWWDANPIDVVRQATRT
Sbjct: 82  TLWWHAHSSWLRATVYGALIIRPREGESYPFPKPHREATLLMGEWWDANPIDVVRQATRT 141

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRGAWIM 91
           GAAPN+SDA+TFNGQPGDLYKCSS+   I+
Sbjct: 142 GAAPNISDAYTFNGQPGDLYKCSSKDTIIV 171

[Close]
BLAST of Cp4.1LG01g21920 vs. NCBI nr
Match: gi|659081730|ref|XP_008441484.1| (PREDICTED: laccase-12 [Cucumis melo])

HSP 1 Score: 181.4 bits (459), Expect = 9.9e-43
Identity = 79/90 (87.78%), Postives = 85/90 (94.44%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHSSWLRATVYGALII P++GDSYPFPKPNREA LLMGEWWDANPIDV+RQATRT
Sbjct: 126 TLWWHAHSSWLRATVYGALIIHPKEGDSYPFPKPNREATLLMGEWWDANPIDVLRQATRT 185

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRGAWIM 91
           GAAPNVSDA+TFNGQPGDLYKCSS+   I+
Sbjct: 186 GAAPNVSDAYTFNGQPGDLYKCSSKDTIIV 215

[Close]
BLAST of Cp4.1LG01g21920 vs. NCBI nr
Match: gi|976906687|gb|KVH94097.1| (Cupredoxin, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-42
Identity = 77/128 (60.16%), Postives = 92/128 (71.88%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAHS WLR+TVYGAL+IRP+ G SYPFP P  E  +++GEWWD   I V+RQA  T
Sbjct: 60  TLWWHAHSRWLRSTVYGALVIRPKSGSSYPFPNPKIEFPVVLGEWWDRKVISVLRQALFT 119

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRGAWIMHCHLDVHITWGLAMVFLVDNGVGHLQSIES 120
           GAAPNVSDA T NGQP         G W+MHCH+D H+ WG AM F+V+NGVG  +++  
Sbjct: 120 GAAPNVSDALTINGQP---------GVWLMHCHIDTHLAWGFAMSFIVENGVGESETLLP 178

Query: 121 PPPDLPIC 129
           PP DLP C
Sbjct: 180 PPSDLPQC 178

[Close]
BLAST of Cp4.1LG01g21920 vs. NCBI nr
Match: gi|218196921|gb|EEC79348.1| (hypothetical protein OsI_20213 [Oryza sativa Indica Group])

HSP 1 Score: 178.3 bits (451), Expect = 8.4e-42
Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 1 

Query: 1   TLWWHAHSSWLRATVYGALIIRPRQGDSYPFPKPNREAILLMGEWWDANPIDVVRQATRT 60
           TLWWHAH SWLRATV+G ++I P  G  YPFP P+ E  ++ GEWW+ +   V+ QA +T
Sbjct: 45  TLWWHAHISWLRATVHGPMVILPPAGVGYPFPAPHEEVPIMFGEWWNNDTEAVISQALQT 104

Query: 61  GAAPNVSDAFTFNGQPGDLYKCSSRGAWIMHCHLDVHITWGLAMVFLVDNGVGHLQSIES 120
           G  PN+SDA+T NG PG LY CS++G WIMHCHLDVH++WGL+M +LV++G    Q +  
Sbjct: 105 GGGPNISDAYTLNGLPGPLYNCSAQGVWIMHCHLDVHLSWGLSMAWLVNDGPLPNQKLPP 164

Query: 121 PPPDLPIC 129
           PP D+P+C
Sbjct: 165 PPSDIPMC 172

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g21920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LAC12_ARATH3.3e-3875.29Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1[more]
LAC3_ORYSJ1.8e-3677.11Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1[more]
LAC5_ARATH1.2e-3568.89Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1[more]
LAC17_ORYSJ7.6e-3577.91Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1[more]
LAC23_ORYSJ9.9e-3577.91Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=3 SV=1[more]
BLAST of Cp4.1LG01g21920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8M4_CUCSA5.3e-4387.78Laccase OS=Cucumis sativus GN=Csa_6G012820 PE=3 SV=1[more]
A0A103XNP2_CYNCS9.0e-4360.16Cupredoxin (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_003833 PE=4 SV... [more]
B8AZ35_ORYSI5.8e-4255.47Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20213 PE=3... [more]
Q8L4Y3_SOYBN1.1e-4080.65Laccase OS=Glycine max PE=2 SV=1[more]
A0A0K9S221_SPIOL1.4e-4053.13Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003940 PE=3 SV=1[more]
BLAST of Cp4.1LG01g21920 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G05390.11.8e-3975.29 laccase 12[more]
AT2G40370.16.6e-3768.89 laccase 5[more]
AT2G30210.11.0e-3470.93 laccase 3[more]
AT5G07130.13.4e-3372.41 laccase 13[more]
AT3G09220.12.3e-2961.45 laccase 7[more]
BLAST of Cp4.1LG01g21920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441284|ref|XP_004138412.1|7.6e-4387.78PREDICTED: laccase-12-like [Cucumis sativus][more]
gi|700190604|gb|KGN45808.1|7.6e-4387.78hypothetical protein Csa_6G012820 [Cucumis sativus][more]
gi|659081730|ref|XP_008441484.1|9.9e-4387.78PREDICTED: laccase-12 [Cucumis melo][more]
gi|976906687|gb|KVH94097.1|1.3e-4260.16Cupredoxin, partial [Cynara cardunculus var. scolymus][more]
gi|218196921|gb|EEC79348.1|8.4e-4255.47hypothetical protein OsI_20213 [Oryza sativa Indica Group][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0005507copper ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011706Cu-oxidase_2
IPR008972Cupredoxin
IPR002355Cu_oxidase_Cu_BS
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046274 lignin catabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0048046 apoplast
molecular_function GO:0005507 copper ion binding
molecular_function GO:0052716 hydroquinone:oxygen oxidoreductase activity
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g21920.1Cp4.1LG01g21920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002355Multicopper oxidase, copper-binding sitePROSITEPS00080MULTICOPPER_OXIDASE2coord: 91..102
scor
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 29..82
score: 3.7E-9coord: 85..128
score: 1.
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 69..128
score: 6.59E-10coord: 31..75
score: 8.3
IPR011706Multicopper oxidase, type 2PFAMPF07731Cu-oxidase_2coord: 83..110
score: 2.
NoneNo IPR availablePANTHERPTHR11709MULTI-COPPER OXIDASEcoord: 1..91
score: 2.0
NoneNo IPR availablePANTHERPTHR11709:SF22LACCASE-12-RELATEDcoord: 1..91
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g21920CmaCh04G028900Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g21920Cla006606Watermelon (97103) v1cpewmB461
Cp4.1LG01g21920ClCG11G005980Watermelon (Charleston Gray)cpewcgB355
Cp4.1LG01g21920MELO3C008319.2Melon (DHL92) v3.6.1cpemedB465
Cp4.1LG01g21920CsaV3_6G002020Cucumber (Chinese Long) v3cpecucB0569
Cp4.1LG01g21920Bhi04G001867Wax gourdcpewgoB0525
Cp4.1LG01g21920CsGy6G001970Cucumber (Gy14) v2cgybcpeB798
Cp4.1LG01g21920Carg02138Silver-seed gourdcarcpeB0374
Cp4.1LG01g21920Carg05964Silver-seed gourdcarcpeB0034
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g21920Cucurbita pepo (Zucchini)cpecpeB074
Cp4.1LG01g21920Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g21920Cucurbita pepo (Zucchini)cpecpeB376
Cp4.1LG01g21920Cucumber (Gy14) v1cgycpeB0344
Cp4.1LG01g21920Cucumber (Gy14) v1cgycpeB0364
Cp4.1LG01g21920Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g21920Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g21920Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g21920Wild cucumber (PI 183967)cpecpiB461
Cp4.1LG01g21920Cucumber (Chinese Long) v2cpecuB413
Cp4.1LG01g21920Cucumber (Chinese Long) v2cpecuB460
Cp4.1LG01g21920Bottle gourd (USVL1VR-Ls)cpelsiB339
Cp4.1LG01g21920Watermelon (97103) v1cpewmB445
Cp4.1LG01g21920Melon (DHL92) v3.5.1cpemeB400
Cp4.1LG01g21920Melon (DHL92) v3.5.1cpemeB433
Cp4.1LG01g21920Cucumber (Gy14) v2cgybcpeB514
Cp4.1LG01g21920Melon (DHL92) v3.6.1cpemedB505
Cp4.1LG01g21920Silver-seed gourdcarcpeB0786
Cp4.1LG01g21920Cucumber (Chinese Long) v3cpecucB0509
Cp4.1LG01g21920Wax gourdcpewgoB0546