Cp4.1LG01g21510 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g21510
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTRNA nucleotidyltransferase
LocationCp4.1LG01 : 18086072 .. 18089846 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCCCGAACGAGTCCTAGATCATAGCGGTATTGGATGCTTCTTTATAAAGCTATGAGAGTGTTTAAATCTTTCAAAATCGCTCTCAAACTCGACGCTCTCGTCCTTCCGCCATTCTCGTTCCGCAGTTCCATCGCCAGGTTTTCAACCTCTCTTGGCGCCCCCAAATACCCCAGAACAACCAGACCTCCATTGATTCTGTCTACGAAATCAATGGCGTCGTCAATCTCTTCGCCGAAACCAGTCGTTCAAGTCAAAGACAAGATTGAACTCACTGAAATCGAGGAGAAGATATTTAATAGGCTTCTTGGCACTCTTCGTCACTTCAATCTCGAAACGCAGCTTCGAGTTGCCGGCGGTTGGGTTCGCGATAAGGTCGTTCTCTATCATTATCTCTCTCTAATTCTCTGAGATTTTGTAAGTTTTTTTGCTGTTGATGAGCCTGAATTTCACGAACTATTTCTAGGGTTTGGGGGATTTTTTTTATATTTTTATATTTTTTAAATTGATCGTGTTTTTGGATGATTTACCTTACAGCTTCTAGGCAAAGATTGTTACGACATTGACATCGCCCTGGACAACATGCTGGGTAGCGAGTTTGTGGACAAGGTTAGAGAGTATTTGTTGACAGTTGGGGAAGAGGCGCAAGGAGTCGCTGTTATTCCATGGTACGAGAATCATGTGCATTTGCGCAATTATATGCTAATTAGGAGTACTAAAGAGGAATTGGGAGGCGTTTTAGTTTAAGAACGAGAATGATTTTTCAAGTTTGTTATGCTGTGGCTTTATTTTTTGGTTCTTTTGAACAGTTTGGAAGCGATTCCTAATTTCGAATTATGTTTTTCCAGTAACCCTGAGCAATCAAAACATCTAGAAACAGCAAGGATGCGTATCTTTGATATATGGATTGATTTTGTGAACTTGAGGTGTGAGGAATACAGTGAGAATAGCCGAATTCCTACTAAGGTATGTAGTCATTTGATTTCCAAGTTCAAATTTTTGTGGTTTGAAAGGAAAATTTCAGTTGTGCTTAAGATTATAGGTTGAAATTTTAGCATGAAAGATGCAGTTGATGAATGCCCTAAAATGTCAAACAACGATGACGAAATCTTTAGCTTTTGGATCATGTATTTTTCCCTTTATTATGTCGATATTTGTTATGGAGATTAAAATCTCTCTGCTTGATACCGTAAGAAATAGTGTATTTTTTCGCATAAGATGACTGGTTGTGAGTGCAGAAATCTTCATTGATTATCGATATTTTGGCCGACATCTTTAATTGATCATGTAATGTACAACATTCTTTGTTACTAATGGTGAATATTTTGTCTAAATTTTTATTATATGCGTGAAGGTTAACCATTTACTTGATTTCACAGCAAAAGTTCGGGACGGCTGAAGAGGATGCTTATAGAAGGGATTTAACGATCAATAGGTATATTTTTGTTCATTGCATAGCCCATTTAAGATATTATATTCCTTCAGATTATATTTCTTGTTTTGTTAATGTCGTTTTTTTTCCCTTCCCCCTTATAGCTTGTTCTATAACATTAACTCGAGCTTAGTTGAAGATATGACGAAAAGAGGTTTGTATTGATTTACTTTTGTTTACAGTCCATATTGAGAATTGCTTTGTTTTATTTTCTTTCTTATCATAAAATAATTATAAGAGGTGAAATGTTCAATTTAATGTATAAAAAAACAGACTGAATATGAGGTTTCCTTGATAATTGAGGTCTGAAGAGAGTACTAGTTGTTCATTTTCTATATTTCTCCCCTCCTTATACAACCTTGAATTGCAGGCATATCGGATTTGAAGTTTGGGAAAATTGTGACTCCTTTACCTCCGAAAGCTACATTTATGGATGATCCGCTTCGAGTCCTTCGAGCCATACGTTTCTGTATGTGTTATTAGTTATATGAACCTTGCATCTGATTTTATGATGTTTACTTTATTCATGATTTTCCCTTTACTTTACTCTCCTGTAATTATTTCAGGTGCCAGATTTGAATTCACATTGGACGAAGAATTGAAAGTTGCCGCATCATGTGAAGAAGTAAAGGCTGCTCTCGCTACCAAGATTAGCAGAGAACGTATCGGGGTCGAAGTGAGTTTTATATCGAATATCTCTTTTTCAGAAAACTTACTTGTTGTTTGATATTGGATTTGATACTTGATCTAATAGGTTCTTCTGTTTCTTGGTTTTATGTAGATCGATCTCATGATGGCTGGGAATCAGCCAGTTAAAGCAATGAGCTACATTTGTGATTTGACATTATTTTGGACTGTCTTTACACTTCCTTCTAACACTGAACCCGAAATACCAGACGTGTGTAATAGGTACGTTTGATTCATCTTGCCATAAAGTTGTTTGGGTAGTTTGCTAAGTATATAATATTATGAGGTATGTCTGAGGTTCCGAGAAGTTGGAGAGCAAACACTTTGGGTGCTATCACTCCATTCTGTATCTTTGGCATTATAATTATTCTTTCAAAACAAGAATAAACGAAACTCGGTCTCTCTCTCTCATGTTTTTGGGTTACCCCTTTTGTTAGGCTTTGCATTGCTTGTCAAGAGGCCACATGGAACCTCCTCCAACTAATCAAATGCGTCACCTTTAATGTAAGTGAAAAGATTATTAGGGGTTTTATGCCCTGCAATTCGTCCCGTGATGGCTTTGTTTCTTTTATATGCATAAATTGATTATCAGTGTTTAATTATTTTACTAATGGTTTTCTATAACGTTCGAGTTATAGGACGAACAGAAAAGGCTCTCTATGTATGCTGCTCTCTTCCTTCCAATCAGAAAATTCACATTTAAAGATAAGAAATCCAAAAAGGTATTTAACATTTCACTGATGTTGTTTTGTGTGCTTAAGATATTTTGGCTGCTTCAAATTCTGAATCTTCTGCCCTGCAGATTCCTGTTGTCAACCATATTTTTCGGGAATCCCTTAAGCGAAAAGTTAGCGATGCCGAAACGGTTAGTTACACTCCGAACTAGTTTGTTCTTTGTGGTTATATATATTTAAATTATCGCACTTCCACGGATTTTTGAATCTGATTACATCTTTCCCATATAGGTTGTTCAACTACATCACGCCTTGGAAAAGTTTTTGACCTTGATTCCGCTTCTTGTATCGAAAGAGGAAATCCAACCCAATGGCGTTGATTGGGGTGTTGAATGTGCGGATGTTCCTGATACGTCAAGGATTCGAGTATTGACTGGTACTGTAAAGAACTTTATATAAATCAAGTTATAGAATTACTGCACAATCAAGAGCTCGCATAATTGATATTTCTGAAAGAAAGTTTAGCGGTCGTCTCGATTCTAGGATGTAGATTCATTGGATTGTCTTTGTTGACATATTTTTCGTCCTCTGCAGGGCTTCTTTTGCGGGAAATTAAAGACTTCTGGCCTGTAGCTTTATTGTTGGCCACGTTGTTATATCCCGCTAATGTAGATTATACCGAAGATCTGTTAAACAGACGTTTCGAACTGGAAAAGCGAACAGAATTGTTTGATGTCGCCTACAATGAGATCGTTAAATTAGGTAAACCCTTAACCCGTTGAGCGTACGAAAATGTTGTGTGTTTCCTTGTTCAATCTTTGGCATCTAACCCGACTCTTTGGGAAACTCCCATTTCCCTGTTGCTTTCAGGTTTGCAAAATGTGTGGGAGGTGAAACCTCTTGTGAATGGGAAAGAGATTATGAACATTTTGCAGCTAAAATCAGGAGGACCTCTTGTTAGAGAATGGGTGAGTGGATTTTGA

mRNA sequence

TATCCCGAACGAGTCCTAGATCATAGCGGTATTGGATGCTTCTTTATAAAGCTATGAGAGTGTTTAAATCTTTCAAAATCGCTCTCAAACTCGACGCTCTCGTCCTTCCGCCATTCTCGTTCCGCAGTTCCATCGCCAGGTTTTCAACCTCTCTTGGCGCCCCCAAATACCCCAGAACAACCAGACCTCCATTGATTCTGTCTACGAAATCAATGGCGTCGTCAATCTCTTCGCCGAAACCAGTCGTTCAAGTCAAAGACAAGATTGAACTCACTGAAATCGAGGAGAAGATATTTAATAGGCTTCTTGGCACTCTTCGTCACTTCAATCTCGAAACGCAGCTTCGAGTTGCCGGCGGTTGGGTTCGCGATAAGCTTCTAGGCAAAGATTGTTACGACATTGACATCGCCCTGGACAACATGCTGGGTAGCGAGTTTGTGGACAAGGTTAGAGAGTATTTGTTGACAGTTGGGGAAGAGGCGCAAGGAGTCGCTGTTATTCCATGTTTGGAAGCGATTCCTAATTTCGAATTATGTTTTTCCAGTAACCCTGAGCAATCAAAACATCTAGAAACAGCAAGGATGCGTATCTTTGATATATGGATTGATTTTGTGAACTTGAGGTGTGAGGAATACAGTGAGAATAGCCGAATTCCTACTAAGCAAAAGTTCGGGACGGCTGAAGAGGATGCTTATAGAAGGGATTTAACGATCAATAGCTTGTTCTATAACATTAACTCGAGCTTAGTTGAAGATATGACGAAAAGAGGCATATCGGATTTGAAGTTTGGGAAAATTGTGACTCCTTTACCTCCGAAAGCTACATTTATGGATGATCCGCTTCGAGTCCTTCGAGCCATACGTTTCTGTGCCAGATTTGAATTCACATTGGACGAAGAATTGAAAGTTGCCGCATCATGTGAAGAAGTAAAGGCTGCTCTCGCTACCAAGATTAGCAGAGAACGTATCGGGGTCGAAATCGATCTCATGATGGCTGGGAATCAGCCAGTTAAAGCAATGAGCTACATTTGTGATTTGACATTATTTTGGACTGTCTTTACACTTCCTTCTAACACTGAACCCGAAATACCAGACGTGTGTAATAGGCTTTGCATTGCTTGTCAAGAGGCCACATGGAACCTCCTCCAACTAATCAAATGCGTCACCTTTAATGACGAACAGAAAAGGCTCTCTATGTATGCTGCTCTCTTCCTTCCAATCAGAAAATTCACATTTAAAGATAAGAAATCCAAAAAGATTCCTGTTGTCAACCATATTTTTCGGGAATCCCTTAAGCGAAAAGTTAGCGATGCCGAAACGGTTGTTCAACTACATCACGCCTTGGAAAAGTTTTTGACCTTGATTCCGCTTCTTGTATCGAAAGAGGAAATCCAACCCAATGGCGTTGATTGGGGTGTTGAATGTGCGGATGTTCCTGATACGTCAAGGATTCGAGTATTGACTGGGCTTCTTTTGCGGGAAATTAAAGACTTCTGGCCTGTAGCTTTATTGTTGGCCACGTTGTTATATCCCGCTAATGTAGATTATACCGAAGATCTGTTAAACAGACGTTTCGAACTGGAAAAGCGAACAGAATTGTTTGATGTCGCCTACAATGAGATCGTTAAATTAGGTTTGCAAAATGTGTGGGAGGTGAAACCTCTTGTGAATGGGAAAGAGATTATGAACATTTTGCAGCTAAAATCAGGAGGACCTCTTGTTAGAGAATGGGTGAGTGGATTTTGA

Coding sequence (CDS)

ATGCTTCTTTATAAAGCTATGAGAGTGTTTAAATCTTTCAAAATCGCTCTCAAACTCGACGCTCTCGTCCTTCCGCCATTCTCGTTCCGCAGTTCCATCGCCAGGTTTTCAACCTCTCTTGGCGCCCCCAAATACCCCAGAACAACCAGACCTCCATTGATTCTGTCTACGAAATCAATGGCGTCGTCAATCTCTTCGCCGAAACCAGTCGTTCAAGTCAAAGACAAGATTGAACTCACTGAAATCGAGGAGAAGATATTTAATAGGCTTCTTGGCACTCTTCGTCACTTCAATCTCGAAACGCAGCTTCGAGTTGCCGGCGGTTGGGTTCGCGATAAGCTTCTAGGCAAAGATTGTTACGACATTGACATCGCCCTGGACAACATGCTGGGTAGCGAGTTTGTGGACAAGGTTAGAGAGTATTTGTTGACAGTTGGGGAAGAGGCGCAAGGAGTCGCTGTTATTCCATGTTTGGAAGCGATTCCTAATTTCGAATTATGTTTTTCCAGTAACCCTGAGCAATCAAAACATCTAGAAACAGCAAGGATGCGTATCTTTGATATATGGATTGATTTTGTGAACTTGAGGTGTGAGGAATACAGTGAGAATAGCCGAATTCCTACTAAGCAAAAGTTCGGGACGGCTGAAGAGGATGCTTATAGAAGGGATTTAACGATCAATAGCTTGTTCTATAACATTAACTCGAGCTTAGTTGAAGATATGACGAAAAGAGGCATATCGGATTTGAAGTTTGGGAAAATTGTGACTCCTTTACCTCCGAAAGCTACATTTATGGATGATCCGCTTCGAGTCCTTCGAGCCATACGTTTCTGTGCCAGATTTGAATTCACATTGGACGAAGAATTGAAAGTTGCCGCATCATGTGAAGAAGTAAAGGCTGCTCTCGCTACCAAGATTAGCAGAGAACGTATCGGGGTCGAAATCGATCTCATGATGGCTGGGAATCAGCCAGTTAAAGCAATGAGCTACATTTGTGATTTGACATTATTTTGGACTGTCTTTACACTTCCTTCTAACACTGAACCCGAAATACCAGACGTGTGTAATAGGCTTTGCATTGCTTGTCAAGAGGCCACATGGAACCTCCTCCAACTAATCAAATGCGTCACCTTTAATGACGAACAGAAAAGGCTCTCTATGTATGCTGCTCTCTTCCTTCCAATCAGAAAATTCACATTTAAAGATAAGAAATCCAAAAAGATTCCTGTTGTCAACCATATTTTTCGGGAATCCCTTAAGCGAAAAGTTAGCGATGCCGAAACGGTTGTTCAACTACATCACGCCTTGGAAAAGTTTTTGACCTTGATTCCGCTTCTTGTATCGAAAGAGGAAATCCAACCCAATGGCGTTGATTGGGGTGTTGAATGTGCGGATGTTCCTGATACGTCAAGGATTCGAGTATTGACTGGGCTTCTTTTGCGGGAAATTAAAGACTTCTGGCCTGTAGCTTTATTGTTGGCCACGTTGTTATATCCCGCTAATGTAGATTATACCGAAGATCTGTTAAACAGACGTTTCGAACTGGAAAAGCGAACAGAATTGTTTGATGTCGCCTACAATGAGATCGTTAAATTAGGTTTGCAAAATGTGTGGGAGGTGAAACCTCTTGTGAATGGGAAAGAGATTATGAACATTTTGCAGCTAAAATCAGGAGGACCTCTTGTTAGAGAATGGGTGAGTGGATTTTGA

Protein sequence

MLLYKAMRVFKSFKIALKLDALVLPPFSFRSSIARFSTSLGAPKYPRTTRPPLILSTKSMASSISSPKPVVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDCYDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETARMRIFDIWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGISDLKFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKISRERIGVEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIACQEATWNLLQLIKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKRKVSDAETVVQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVECADVPDTSRIRVLTGLLLREIKDFWPVALLLATLLYPANVDYTEDLLNRRFELEKRTELFDVAYNEIVKLGLQNVWEVKPLVNGKEIMNILQLKSGGPLVREWVSGF
BLAST of Cp4.1LG01g21510 vs. Swiss-Prot
Match: CCA1_CANGA (CCA tRNA nucleotidyltransferase, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CCA1 PE=1 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 5.9e-63
Identity = 167/515 (32.43%), Postives = 262/515 (50.87%), Query Frame = 1

Query: 76  KIELTEIEEKIFNRLLGTLRHFNL------ETQLRVAGGWVRDKLLGKDCYDIDIALDNM 135
           +I+LTE E +I N L     H+N          LR+ GGWVRDKLLG+  +D+DIA++ M
Sbjct: 14  RIQLTEKETRICNLLKDYTAHYNSLHYGQEPLTLRITGGWVRDKLLGQGSHDLDIAINIM 73

Query: 136 LGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETARMRIFDIW 195
            G EF   +  YLL   E      V P   +I   +     NPE+SKHLETA  ++FD+ 
Sbjct: 74  SGEEFATGLNGYLL---EHFDKYGVKP--HSIHKID----KNPEKSKHLETATTKLFDVE 133

Query: 196 IDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGISDL 255
           +DFVNLR EEY+E+SRIPT Q FGT EEDA RRD T+N+LFYNI    VED TKRG  DL
Sbjct: 134 VDFVNLRSEEYTEDSRIPTTQ-FGTPEEDALRRDATLNALFYNIQQDAVEDFTKRGWQDL 193

Query: 256 KFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKISRE 315
           + G + TPLP + TF+DDPLRVLR IRF +RF F ++  +       E+  A   KISRE
Sbjct: 194 QDGVLRTPLPARQTFLDDPLRVLRLIRFASRFNFNIEAGVLKEMHDPEINEAFNNKISRE 253

Query: 316 RIGVEIDLMMAGNQPVKAM-----SYICDLTLFW----TVFTLPSNTEPEIPDV------ 375
           RIGVE++ ++ G  P+  +     +++ ++   W    +V        P+  DV      
Sbjct: 254 RIGVEMEKILVGPNPILGLKLIQRTHLENVIFLWHGDQSVIEYNRKNWPQTKDVEDIYKK 313

Query: 376 ------CNRLCIACQEATWNLLQLIKCVTFNDEQ-KRLSMYAALFLPIRKFTF----KDK 435
                         ++     L+L + +   D+  ++  + A++ +P+         K K
Sbjct: 314 GIFNHHLKNFIHHYKDFLSRYLKLRQAIETKDKSFQQNFLLASILIPMADLKIIALPKKK 373

Query: 436 KSKKIPVVNHIFRESLKRKVSDAETVVQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVEC 495
            +  +PV   I RE LK   + +  V +    +  + +++   +   +++ + V      
Sbjct: 374 LNNTLPVSESIVREGLKFNKASSIVVARCVENIAAYNSMVEKYLQSGDLKRSEV------ 433

Query: 496 ADVPDTSRIRVLTGLLLREIKDFWPVALLLATLLYPANVDYTEDLLNRRFELEKRTELFD 555
                        G  LRE++  W +      + Y + +D     ++R+  +    + +D
Sbjct: 434 -------------GTFLRELRGDWEI------VHYVSLMDQYLKYISRKDNVVNIIDKYD 493

Query: 556 VAYNEIVKLGLQNVWEVKPLVNGKEIMNILQLKSG 559
             +N I +  LQ+  ++ P+++GK ++ IL+ K G
Sbjct: 494 RFWNYIQEQNLQDSDKMVPIIDGKRMVKILETKPG 493

BLAST of Cp4.1LG01g21510 vs. Swiss-Prot
Match: CCA2_SCHPO (Putative CCA tRNA nucleotidyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC645.10 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.6e-60
Identity = 170/501 (33.93%), Postives = 263/501 (52.50%), Query Frame = 1

Query: 76  KIELTEIEEKIFNRLLGTLRHFNLET------QLRVAGGWVRDKLLGKDCYDIDIALDNM 135
           +I L ++E+K+ N L  T      ++      ++R+AGGWVRDKLLG    D+D+ L+ +
Sbjct: 4   RIVLNDVEKKVVNLLKKTADFIESKSSSSSSLEVRLAGGWVRDKLLGLSSDDLDVTLNKV 63

Query: 136 LGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETARMRIFDIW 195
            G +F + + EY+ ++  ++    VIP  +A+    +    NP+QSKHLETA + +FD+ 
Sbjct: 64  TGVDFANSIFEYVHSLDSDS----VIPYKDALGKLTV----NPDQSKHLETATLSLFDLD 123

Query: 196 IDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGISDL 255
           IDFV LR E Y + SRIP+    GT E DA RRD T+N+LF+NI +  +ED+TKRG  DL
Sbjct: 124 IDFVGLRAESYDDKSRIPSVTP-GTVETDALRRDFTVNTLFFNIRTEKIEDITKRGYKDL 183

Query: 256 KFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKISRE 315
           +   +VTP+ P  +F++DPLR+LR IRF +RFEFT+D  +  A    +V  A   K+S+E
Sbjct: 184 QTKVLVTPISPLQSFLEDPLRILRGIRFASRFEFTIDPSVVSAIQDPKVCKAFEKKVSKE 243

Query: 316 RIGVEIDLMMAGNQPVKAMSYICDLTLF-WTVFTLPSNTEPEIPDVCNRLCIACQEATWN 375
           R+G EI+ M+ G     A+  +     + +T  TLP+  E +IP           EAT +
Sbjct: 244 RVGEEIEKMLKGANAKLALQLLYSTNTYQFTFDTLPAEKEFQIPKAL--------EATES 303

Query: 376 LLQLIKCVTF-------NDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKR 435
           L Q +  +TF        DE+  L +Y AL     +     KK   IP +  I ++ LK 
Sbjct: 304 LFQSL-ALTFPKLMKLSEDEKIGLWLYVALIPWSSQTVMVKKKQFYIPAI--IAKDKLKL 363

Query: 436 KVSDAETVVQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVECADVPDTSRIRVLT-GLLL 495
           +     T V   + L +  T  P+    +E+             V DTS     + G L+
Sbjct: 364 R----STYV---NQLNQCCTFNPIF---DEL-------------VNDTSTKNCSSIGSLI 423

Query: 496 REIKDFWPVALLLATLLYPANVDYTEDLLNRRFELEKRTELFDVAYNEIVKLGLQNVWEV 555
           R++   W V + L +++Y         + N          L+D  Y++     LQN + +
Sbjct: 424 RQLNKSWEV-VFLTSVIYSCCKTPAASVSN---TFSSYKSLYDFIYDK----NLQNAYNM 453

Query: 556 KPLVNGKEIMNILQLKSGGPL 562
           KPL++GK+IM  + +K G  L
Sbjct: 484 KPLLDGKQIMKNVGVKPGPQL 453

BLAST of Cp4.1LG01g21510 vs. Swiss-Prot
Match: CCA1_YEAST (CCA tRNA nucleotidyltransferase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCA1 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.1e-56
Identity = 129/293 (44.03%), Postives = 172/293 (58.70%), Query Frame = 1

Query: 50  RPPLILSTKSMASSISSPKPVVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQ------- 109
           R  + L   S A    +    V    KI LT++E+ I N L      +N +         
Sbjct: 3   RSTISLLMNSAAQKTMTNSNFVLNAPKITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLT 62

Query: 110 LRVAGGWVRDKLLGKDCYDIDIALDNMLGSEFVDKVREYL----LTVGEEAQGVAVIPCL 169
           LR+ GGWVRDKLLG+  +D+DIA++ M G +F   + EYL       G +   +  I   
Sbjct: 63  LRITGGWVRDKLLGQGSHDLDIAINVMSGEQFATGLNEYLQQHYAKYGAKPHNIHKI--- 122

Query: 170 EAIPNFELCFSSNPEQSKHLETARMRIFDIWIDFVNLRCEEYSENSRIPTKQKFGTAEED 229
                       NPE+SKHLETA  ++F + +DFVNLR E+Y+E SRIP K  FGT EED
Sbjct: 123 ----------DKNPEKSKHLETATTKLFGVEVDFVNLRSEKYTELSRIP-KVCFGTPEED 182

Query: 230 AYRRDLTINSLFYNINSSLVEDMTKRGISDLKFGKIVTPLPPKATFMDDPLRVLRAIRFC 289
           A RRD T+N+LFYNI+   VED TKRG+ DLK G + TPLP K TF+DDPLRVLR IRF 
Sbjct: 183 ALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDGVLRTPLPAKQTFLDDPLRVLRLIRFA 242

Query: 290 ARFEFTLDEELKVAASCEEVKAALATKISRERIGVEIDLMMAGNQPVKAMSYI 332
           +RF FT+D E+       ++  A  +KISRER+GVE++ ++ G  P+ A+  I
Sbjct: 243 SRFNFTIDPEVMAEMGDPQINVAFNSKISRERVGVEMEKILVGPTPLLALQLI 281

BLAST of Cp4.1LG01g21510 vs. Swiss-Prot
Match: CCA1_SCHPO (Putative CCA tRNA nucleotidyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1093.04c PE=3 SV=2)

HSP 1 Score: 201.4 bits (511), Expect = 2.6e-50
Identity = 157/498 (31.53%), Postives = 239/498 (47.99%), Query Frame = 1

Query: 77  IELTEIEEKIFNRLLGTLRHFNL----ETQLRVAGGWVRDKLLGKDCYDIDIALDNMLGS 136
           +EL E E+++ +  L   +        E ++R AGGWVRDKLL  + +DID+A+D M G 
Sbjct: 8   LELNETEKELSDIFLNVSKKIGQMDRKEPEVRFAGGWVRDKLLRIESHDIDVAIDCMSGF 67

Query: 137 EFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFE---LCFSSNPEQSKHLETARMRIFDIW 196
           EF   ++ YL                +  P++E   +   +NP +SKHLETA  RI  + 
Sbjct: 68  EFAQHLQSYLA---------------QQHPDWETKVIKIDANPLKSKHLETATARIMGMD 127

Query: 197 IDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGISDL 256
           ID VNLR  +Y+ NS    K  FGT  EDA RRD TIN+LFYN+ S  VED T +G+ DL
Sbjct: 128 IDIVNLRHHDYT-NSNSSNKLVFGTPLEDALRRDATINALFYNLKSKTVEDFTGKGLVDL 187

Query: 257 KFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKISRE 316
               I TPL    TF DDPLR +R IRF  +++F + EE        E+   L + ISRE
Sbjct: 188 SNKIIRTPLVADETFGDDPLRAVRCIRFATKYDFNIHEETIKGLKNPELHERLRSSISRE 247

Query: 317 RIGVEIDLMMAGNQPVKAMSYICDLTLFWTVF-TLPSNTEP-EIPDVCNRLCIACQEATW 376
           RIGVE+D M+      +A+  I  L +F  +F  L  +T+  +  ++ +   I      +
Sbjct: 248 RIGVEVDKMLKHCNTNRALKIIHSLGMFACIFGPLEIHTKKLQSKNIESLSLIPYAIDLF 307

Query: 377 NLLQL--IKCVTFNDEQKRLSMYAALFLPIRKFTFKDK-KSKKIPVVNHIFRESLKRKVS 436
             LQ   +     +   K +   A   LP   ++  +K K K +P +  + R+SLK    
Sbjct: 308 GYLQKKDVSIKNLSSSSKYIFWLAIATLPWYNWSILEKSKIKILPPI--LIRDSLKYSKP 367

Query: 437 DAETVVQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVECADVPDTSRIRVLTGLLLREIK 496
               V       E F    PL++SK  +               +    R+  G L+RE+ 
Sbjct: 368 IMSQV-------ENFFVHYPLIMSKINVLEK------------EGKLTRLGCGRLVRELG 427

Query: 497 DFW----PVALLLATLLYPANVDYTEDLLNRRFELEKRTELFDVAYNEIVKLGLQNVWEV 556
             W      A  + TL+  +++        +R   ++    F V    I + G++  + +
Sbjct: 428 PHWRDIIDWAFFMNTLISNSDI--------QRLNKDEEVTWFHVLVKHIEEYGMEEAYNI 460

Query: 557 KPLVNGKEIMNILQLKSG 559
           +P++NG EI  IL ++ G
Sbjct: 488 QPIINGNEITRILGIRPG 460

BLAST of Cp4.1LG01g21510 vs. Swiss-Prot
Match: PCNB_ECOL6 (Poly(A) polymerase I OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=pcnB PE=3 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 9.9e-10
Identity = 45/140 (32.14%), Postives = 67/140 (47.86%), Query Frame = 1

Query: 202 ENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGISDLKFGKIVTPLPPK 261
           +N  +     FG+ EEDA RRD TINSL+Y++    V D    G+ DLK G I     P+
Sbjct: 141 QNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYV-GGMKDLKDGVIRLIGNPE 200

Query: 262 ATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKISRERIGVEIDLMMAG 321
             + +DP+R+LRA+RF A+    +  E    A      A L   I   R+  E   ++  
Sbjct: 201 TRYREDPVRMLRAVRFAAKLGMRISPE---TAEPIPRLATLLNDIPPARLFEESLKLLQA 260

Query: 322 NQPVKAMSYICDLTLFWTVF 342
               +    +C+  LF  +F
Sbjct: 261 GYGYETYKLLCEYHLFQPLF 276

BLAST of Cp4.1LG01g21510 vs. TrEMBL
Match: A0A0A0KEA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052120 PE=3 SV=1)

HSP 1 Score: 905.6 bits (2339), Expect = 3.1e-260
Identity = 457/559 (81.75%), Postives = 493/559 (88.19%), Query Frame = 1

Query: 7   MRVFKSFKIALKLDALVLPPFSFRSSIARFSTSLGAPKYPRTTRPPLILSTKSMASSISS 66
           M++  S  + LKL +L++P  SF +S  +F       K+P T  P    S KSM ++ISS
Sbjct: 1   MKLLFSLNLPLKLHSLIIPSLSFPTSFLKFPPPHSPFKFPTTRFP----SPKSMTTAISS 60

Query: 67  PKPVVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDCYDIDIAL 126
           PKP+VQVKD IELTE EEKIF+RLLGTLRHFNL+TQLRVAGGWVRDKLLGKDCYDIDIAL
Sbjct: 61  PKPLVQVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIAL 120

Query: 127 DNMLGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETARMRIF 186
           DNMLGSEFVDKVREYLLTVGEEAQGVAVIPC             NP+QSKHLETARMRIF
Sbjct: 121 DNMLGSEFVDKVREYLLTVGEEAQGVAVIPC-------------NPDQSKHLETARMRIF 180

Query: 187 DIWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGI 246
           D+WIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNIN S+VED TKRGI
Sbjct: 181 DMWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGI 240

Query: 247 SDLKFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKI 306
           SDLKFGKIVTPLP KATFMDDPLRVLRAIRFCARFEFTLDEELK AA+CEEVKAALA KI
Sbjct: 241 SDLKFGKIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKI 300

Query: 307 SRERIGVEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIACQEAT 366
           SRERIGVEIDLM+AGNQPVKAMSYI DLTLFWTVFTLPSN EPEI +VCNRLC+AC +AT
Sbjct: 301 SRERIGVEIDLMIAGNQPVKAMSYISDLTLFWTVFTLPSNIEPEISEVCNRLCVACLDAT 360

Query: 367 WNLLQLIKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKRKVSDA 426
           WNL+Q I C TF+DEQKRLS YA+ FLP RKFTFKDKKSKKIP+VN+IFR+SLKRK SDA
Sbjct: 361 WNLIQHINCFTFSDEQKRLSFYASPFLPFRKFTFKDKKSKKIPIVNYIFRDSLKRKASDA 420

Query: 427 ETVVQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVECADVPDTSRIRVLTGLLLREIKDF 486
           ETVV +H ALEKFL+LIPLLVSKEEIQPNGVDWGVECADVP TSRIRVLTGLLLREIKDF
Sbjct: 421 ETVVNVHQALEKFLSLIPLLVSKEEIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDF 480

Query: 487 WPVALLLATLLYPANVDYTEDLLNRRFELEKRTELFDVAYNEIVKLGLQNVWEVKPLVNG 546
           WPVALL+ATLLYPA+VDY +DLLNR FELEKR ELFD  YNEIVKLGL+NVWE+KPLVNG
Sbjct: 481 WPVALLMATLLYPADVDYAQDLLNRHFELEKRKELFDDVYNEIVKLGLENVWEMKPLVNG 540

Query: 547 KEIMNILQLKSGGPLVREW 566
           KEIMNILQLK+GGPLVREW
Sbjct: 541 KEIMNILQLKAGGPLVREW 542

BLAST of Cp4.1LG01g21510 vs. TrEMBL
Match: M5VXR0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004187mg PE=3 SV=1)

HSP 1 Score: 729.9 bits (1883), Expect = 2.3e-207
Identity = 359/498 (72.09%), Postives = 416/498 (83.53%), Query Frame = 1

Query: 68  KPVVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDCYDIDIALD 127
           +P VQV+DKIEL E E+KIF+RLLGT+RHF L+ QLRVAGGWVRDKLLGKDCYDIDIALD
Sbjct: 6   RPTVQVRDKIELNETEKKIFDRLLGTVRHFGLQNQLRVAGGWVRDKLLGKDCYDIDIALD 65

Query: 128 NMLGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETARMRIFD 187
           NMLGSEFV+KVR+YLL VGEEAQG+AVIPC             NPEQSKHLETARMRI D
Sbjct: 66  NMLGSEFVEKVRDYLLHVGEEAQGIAVIPC-------------NPEQSKHLETARMRICD 125

Query: 188 IWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGIS 247
            WIDFVNLRCEEY ENSRIPT QK+GTAEEDAYRRDLTINSLFYNIN+S +ED TKRGI+
Sbjct: 126 TWIDFVNLRCEEYCENSRIPTVQKYGTAEEDAYRRDLTINSLFYNINTSSIEDYTKRGIA 185

Query: 248 DLKFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKIS 307
           DLK GKIVTPLPPK+TFMDDPLRVLRAIRF ARF F LDEELK AASC+EVKAAL+ KIS
Sbjct: 186 DLKSGKIVTPLPPKSTFMDDPLRVLRAIRFGARFGFILDEELKEAASCDEVKAALSAKIS 245

Query: 308 RERIGVEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIACQEATW 367
           RERIG EIDLM++GNQPV+AM+YICDL LFW VF+L    EP + + C+RLC+A  +ATW
Sbjct: 246 RERIGTEIDLMISGNQPVQAMAYICDLKLFWVVFSLHPKYEPAVSEGCDRLCLAYLDATW 305

Query: 368 NLLQLIKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKRKVSDAE 427
           NL+QLI   TFNDEQ+RL++Y A+FLP+RK  +KD K+KKIPVVN+IFR+SLKRKVSDAE
Sbjct: 306 NLIQLIGNSTFNDEQRRLALYTAMFLPLRKTVYKDNKAKKIPVVNYIFRDSLKRKVSDAE 365

Query: 428 TVVQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVECADVPDTSRIRVLTGLLLREIKDFW 487
           TV+ +H+A EKFL LIP   S E++    VDW  E  DVP  S+ RVLTG LLRE+KDFW
Sbjct: 366 TVINVHYAFEKFLPLIPYFASNEDVLLTEVDWEREFVDVPLASKPRVLTGFLLRELKDFW 425

Query: 488 PVALLLATLLYPANVDYTEDLLNRRFELEKRTELFDVAYNEIVKLGLQNVWEVKPLVNGK 547
            VALL++ L+YP N+D TEDLLN+ FELE+R  LF  A + ++KLGL  +W+VKPLVNG+
Sbjct: 426 RVALLMSMLVYPHNIDCTEDLLNKNFELERRRSLFKAAEDAVLKLGLDKIWDVKPLVNGR 485

Query: 548 EIMNILQLKSGGPLVREW 566
           +IMN+LQLKSGGPLVREW
Sbjct: 486 DIMNVLQLKSGGPLVREW 490

BLAST of Cp4.1LG01g21510 vs. TrEMBL
Match: A0A0D2QNL2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G263600 PE=3 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 1.8e-204
Identity = 365/556 (65.65%), Postives = 436/556 (78.42%), Query Frame = 1

Query: 14  KIALKLDALVLPPFSFRSSIARFSTSLGAPKYP-RTTRP---PLILSTKSMASSISSPKP 73
           K  L L +  LP      +    ST L        TT P   P + S      +      
Sbjct: 13  KAPLLLHSFTLPTTKITLAFRSVSTPLNETALSLNTTTPNTIPFLPSPFLSCRAAMMTAA 72

Query: 74  VVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDCYDIDIALDNM 133
            VQVK++IELTE E+KIF+RLL TLRHFNL+TQLRVAGGWVRDKLLGK+CYDIDIALDNM
Sbjct: 73  CVQVKEQIELTETEKKIFDRLLNTLRHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNM 132

Query: 134 LGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETARMRIFDIW 193
           LGSEFVDKV+EYL T GE AQG+AVIP             SNPEQSKHLETARMR+FD+W
Sbjct: 133 LGSEFVDKVQEYLSTTGEVAQGLAVIP-------------SNPEQSKHLETARMRLFDLW 192

Query: 194 IDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGISDL 253
           IDFVNLRCE+YSENSRIPT  KFGTAEEDAYRRDLTINSLFYNIN++LVED TKRG+ DL
Sbjct: 193 IDFVNLRCEDYSENSRIPT-MKFGTAEEDAYRRDLTINSLFYNINTNLVEDFTKRGLEDL 252

Query: 254 KFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKISRE 313
           KFG+IVTPLPPKATF+DDPLRVLRAIRF ARF+FTLDEELK AA+C++VK ALA KISRE
Sbjct: 253 KFGRIVTPLPPKATFLDDPLRVLRAIRFGARFDFTLDEELKKAAACDDVKTALAAKISRE 312

Query: 314 RIGVEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIACQEATWNL 373
           R+G EIDLM++GNQPVKA+ Y+CDLTLFW VF+LP   EP + + C+RL  A  +A+W L
Sbjct: 313 RVGTEIDLMISGNQPVKAIDYVCDLTLFWVVFSLPPKVEPAVSEECHRLSAAYLDASWKL 372

Query: 374 LQLIKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKRKVSDAETV 433
           +QLI C  F+DEQ+RL +Y+ALFLP+R   +KD+K KKIPVVN+IFR+SLKRK SDA+TV
Sbjct: 373 IQLIGCSNFDDEQRRLCLYSALFLPLRSAAYKDRKDKKIPVVNYIFRDSLKRKASDADTV 432

Query: 434 VQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVECADVPDTSRIRVLTGLLLREIKDFWPV 493
           + +H +LEKFL+LIP L+S E+IQ   VDWG E  DVP TS++RVLTG LLREIKDFW V
Sbjct: 433 MNIHKSLEKFLSLIPSLLSNEDIQLTEVDWGREFDDVPFTSKLRVLTGFLLREIKDFWRV 492

Query: 494 ALLLATLLYPANVDYTEDLLNRRFELEKRTELFDVAYNEIVKLGLQNVWEVKPLVNGKEI 553
           ALL++TLLYP   + ++D++++ F+L+KR  +F    N IVKLGL+ VW++KPLVNGK+I
Sbjct: 493 ALLISTLLYPTGTECSQDIIDKHFQLDKRKNIFVSVDNAIVKLGLEKVWDLKPLVNGKDI 552

Query: 554 MNILQLKSGGPLVREW 566
           MN+LQLK GGPLVREW
Sbjct: 553 MNVLQLKVGGPLVREW 554

BLAST of Cp4.1LG01g21510 vs. TrEMBL
Match: A0A0B0N6J4_GOSAR (Cca trna nucleotidyltransferase, mitochondrial OS=Gossypium arboreum GN=F383_10808 PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 6.9e-204
Identity = 367/553 (66.37%), Postives = 435/553 (78.66%), Query Frame = 1

Query: 14  KIALKLDALVLPPFSFRSSIARFSTSLGAPKYP-RTTRPPLILSTKSMASSISSPKPVVQ 73
           K  L L +  LP           ST L        TT P  I   +  A+  ++    VQ
Sbjct: 13  KAPLLLHSFTLPTTKITLVFRSVSTPLNETALSLNTTTPNTIPFLRCRAAMTTAA--CVQ 72

Query: 74  VKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDCYDIDIALDNMLGS 133
           VK+KIELTE E+KIF+RLL TLRHFNL+TQLRVAGGWVRDKLLGK+CYDIDIALDNMLGS
Sbjct: 73  VKEKIELTETEKKIFDRLLNTLRHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNMLGS 132

Query: 134 EFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETARMRIFDIWIDF 193
           EFVDKV+EYL T GE AQG+AVIP             SNPEQSKHLETARMR+FD+WIDF
Sbjct: 133 EFVDKVQEYLSTTGEVAQGLAVIP-------------SNPEQSKHLETARMRLFDLWIDF 192

Query: 194 VNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGISDLKFG 253
           VNLRCE+YSENSRIPT  KFGTAEEDAYRRDLTINSLFYNIN++LVED TKRG+ DLKFG
Sbjct: 193 VNLRCEDYSENSRIPT-MKFGTAEEDAYRRDLTINSLFYNINTNLVEDFTKRGLEDLKFG 252

Query: 254 KIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKISRERIG 313
           +IVTPLPPKATF+DDPLRVLRAIRF ARF+FTLDEELK AA+C++VK ALA KISRERIG
Sbjct: 253 RIVTPLPPKATFLDDPLRVLRAIRFGARFDFTLDEELKKAAACDDVKTALAAKISRERIG 312

Query: 314 VEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIACQEATWNLLQL 373
            EIDLM++GNQPVKA+ YICDLTLFW VF+LP   EP + + C RL  A  +A+W L+QL
Sbjct: 313 TEIDLMISGNQPVKAIDYICDLTLFWVVFSLPPKVEPAVSEECYRLSAAYLDASWKLIQL 372

Query: 374 IKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKRKVSDAETVVQL 433
           I C  F+DEQ+RL +Y+ALFLP+R   +KD+K KKIPVVN+IFR+SLKRK SDA+TV+ +
Sbjct: 373 IGCSNFDDEQRRLCLYSALFLPLRSAAYKDRKDKKIPVVNYIFRDSLKRKASDADTVMNI 432

Query: 434 HHALEKFLTLIPLLVSKEEIQPNGVDWGVECADVPDTSRIRVLTGLLLREIKDFWPVALL 493
           H +LEKFL+LI  L+S E+IQ   VDWG E  DVP TS++RVLTG LLREIKDFW VALL
Sbjct: 433 HKSLEKFLSLITSLLSNEDIQLTEVDWGREFDDVPFTSKLRVLTGFLLREIKDFWRVALL 492

Query: 494 LATLLYPANVDYTEDLLNRRFELEKRTELFDVAYNEIVKLGLQNVWEVKPLVNGKEIMNI 553
           ++TLLYP   + ++D++++ F+L+KR  +F    N IVKLGL+ VW++KPLVNGK+IMN+
Sbjct: 493 ISTLLYPTGTECSQDIIDKHFQLDKRKNIFVSVDNAIVKLGLEKVWDLKPLVNGKDIMNV 549

Query: 554 LQLKSGGPLVREW 566
           LQLK GGPLVREW
Sbjct: 553 LQLKVGGPLVREW 549

BLAST of Cp4.1LG01g21510 vs. TrEMBL
Match: A0A061FK21_THECC (Polynucleotide adenylyltransferase family protein isoform 1 OS=Theobroma cacao GN=TCM_036384 PE=3 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 4.5e-203
Identity = 370/564 (65.60%), Postives = 441/564 (78.19%), Query Frame = 1

Query: 3   LYKAMRVFKSFKIALKLDALVLPPFSFRSSIARFSTSLGAPKYPRTTRPPLILSTKSMAS 62
           L KA+R+    K  L L +L LP  +        ST   A     TT+    L +  +  
Sbjct: 5   LNKAIRL--KAKAPLLLHSLYLPAANTSLPFRNVSTHSKATTLTLTTKTRAFLPSPFLTC 64

Query: 63  SIS-SPKPVVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDCYD 122
             + +    VQVK++IELTE E+KIF RLL TLR+FNL+TQLRVAGGWVRDKLLGK+CYD
Sbjct: 65  GAAMATAACVQVKEQIELTETEKKIFARLLNTLRYFNLQTQLRVAGGWVRDKLLGKECYD 124

Query: 123 IDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETA 182
           IDIALDNMLGSEFVDKVREYL + GEEAQG+AVIP             SNPEQSKHLETA
Sbjct: 125 IDIALDNMLGSEFVDKVREYLSSTGEEAQGLAVIP-------------SNPEQSKHLETA 184

Query: 183 RMRIFDIWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDM 242
           RMR+FD+WIDFVNLRCE+YSENSRIPT  KFGTAEEDAYRRDLTINSLFYNIN++LVED 
Sbjct: 185 RMRLFDLWIDFVNLRCEDYSENSRIPT-MKFGTAEEDAYRRDLTINSLFYNINTNLVEDF 244

Query: 243 TKRGISDLKFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAA 302
           TKRGI DLKFG+IVTPL PK TF+DDPLRVLRAIRF ARF F LDEELK AASC++VK A
Sbjct: 245 TKRGIEDLKFGRIVTPLTPKETFLDDPLRVLRAIRFGARFGFALDEELKKAASCDDVKTA 304

Query: 303 LATKISRERIGVEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIA 362
           LA KISRERIG EIDLM++GNQPVKA+ YICDLTLFW VF LP   EP + + C RL  A
Sbjct: 305 LAAKISRERIGTEIDLMISGNQPVKAIDYICDLTLFWVVFNLPLQVEPAVSEGCYRLSAA 364

Query: 363 CQEATWNLLQLIKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKR 422
             +ATW L+QLI C +FNDEQ+RLS+Y+ALFLP+R  T+KD+K+KKIP VN+IF++SLKR
Sbjct: 365 YLDATWKLIQLIGCSSFNDEQRRLSLYSALFLPLRNATYKDRKAKKIPAVNYIFKDSLKR 424

Query: 423 KVSDAETVVQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVECADVPDTSRIRVLTGLLLR 482
           K SDAETV ++H +L+KFL+LIP L+S +++Q   VDWG E  DVP +S++RVLTG LL+
Sbjct: 425 KASDAETVTKVHKSLDKFLSLIPCLLSNDDMQLVKVDWGQEFVDVPLSSKLRVLTGFLLK 484

Query: 483 EIKDFWPVALLLATLLYPANVDYTEDLLNRRFELEKRTELFDVAYNEIVKLGLQNVWEVK 542
           EIKDFW VALL++TLLYP ++D T+D  ++ F+L+KR +LF    N IVKLGL  VW+VK
Sbjct: 485 EIKDFWRVALLMSTLLYPTDIDCTQDDRDKHFQLDKRKDLFVSVENAIVKLGLDKVWDVK 544

Query: 543 PLVNGKEIMNILQLKSGGPLVREW 566
           PLVNGK+IMN+LQLK+GGPLV EW
Sbjct: 545 PLVNGKDIMNVLQLKAGGPLVSEW 552

BLAST of Cp4.1LG01g21510 vs. TAIR10
Match: AT1G22660.1 (AT1G22660.1 Polynucleotide adenylyltransferase family protein)

HSP 1 Score: 563.9 bits (1452), Expect = 1.1e-160
Identity = 297/511 (58.12%), Postives = 371/511 (72.60%), Query Frame = 1

Query: 69  PVVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDCYDIDIALDN 128
           P +++K+ IELT+ E KIF+RLL TLR+ NL+TQLRVAGGWVRDKLLGK+  DIDIA+DN
Sbjct: 76  PSIELKENIELTDKERKIFDRLLSTLRYCNLDTQLRVAGGWVRDKLLGKESDDIDIAIDN 135

Query: 129 MLGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETARMRIFDI 188
           M GSEF+DK +EYL +  EE QG  VI               NP+QSKHLETA++RI+D 
Sbjct: 136 MSGSEFLDKFKEYLSSRDEEVQGDTVI-------------ERNPDQSKHLETAKLRIYDQ 195

Query: 189 WIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGISD 248
           WIDFVNLR EEY+ENSRIPT  KFGTA++DA+RRDLTINSLFYNINS  VED+T+RGI D
Sbjct: 196 WIDFVNLRSEEYTENSRIPT-MKFGTAKDDAFRRDLTINSLFYNINSGAVEDLTERGIDD 255

Query: 249 LKFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKISR 308
           LK GKIVTPLP KATF+DDPLRVLRA+RF ARF FTLDEELK AAS EEV+ AL  KISR
Sbjct: 256 LKSGKIVTPLPAKATFLDDPLRVLRAVRFGARFGFTLDEELKEAASSEEVRVALGEKISR 315

Query: 309 ERIGVEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIACQEATWN 368
           ERIG EIDLM++GN PV A++Y+ DL LF  VF LPS+ EP  P+ C  L  +  EA W+
Sbjct: 316 ERIGNEIDLMISGNGPVSAVTYLSDLKLFSVVFALPSSAEPSPPENCGSLSQSYLEAMWS 375

Query: 369 LLQLIKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKRKVSDAET 428
           LL+  +   F+ EQ+RL++YAA+FLP RK  +KD K K IPVVNHIF+ S+KRK SDAET
Sbjct: 376 LLKTPRPGKFSGEQRRLALYAAMFLPFRKTVYKDTKGKSIPVVNHIFKFSMKRKTSDAET 435

Query: 429 VVQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVECAD-----------VPDTSRIRVLTG 488
           V+ +H   E+F +LIP L  K++++ + + W  +  +           +P TS+IRVLTG
Sbjct: 436 VMNIHQTTERFRSLIPSLEVKKDVELDELTWAADILEHWKSITLNDPVIPATSKIRVLTG 495

Query: 489 LLLREIKDFWPVALLLATLLYPANVDYT---EDLLNRRFELEKRTELFDVAYNEIVKLGL 548
            LLR+IKDFW V+ LL +LL  A VD +   +D+    F+LE+  E +      I +LGL
Sbjct: 496 FLLRDIKDFWRVS-LLTSLLLSATVDGSNDHQDIGQLDFQLERMRETYLTVEATIHELGL 555

Query: 549 QNVWEVKPLVNGKEIMNILQLKSGGPLVREW 566
             +W+ KPLVNG+EIM I +LK G  L+REW
Sbjct: 556 DKIWDAKPLVNGREIMQIAELKGGSRLIREW 571

BLAST of Cp4.1LG01g21510 vs. TAIR10
Match: AT1G28090.1 (AT1G28090.1 Polynucleotide adenylyltransferase family protein)

HSP 1 Score: 60.5 bits (145), Expect = 4.0e-09
Identity = 46/151 (30.46%), Postives = 80/151 (52.98%), Query Frame = 1

Query: 182 RMRIFDIWIDFVNLRCEEYSENSRI---PTK---QKFGTAEEDAYR------RDLTINSL 241
           R  I  +++D + +    +S ++R    P K   +  G  E D  R      RD T+N L
Sbjct: 158 RFPICHVYVDDIIIEVSSFSTSARTGKAPNKSFRRPAGCDERDYIRWKNCLQRDFTVNGL 217

Query: 242 FYNINSSLVEDMTKRGISDLKFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEEL 301
            ++ + ++V D    G+ DL+  K+ T      +F++D  R+LRAIR  AR  F+L ++ 
Sbjct: 218 MFDPSENVVYDYIG-GVEDLRNSKVRTVSAANLSFVEDTARILRAIRIAARLGFSLTKD- 277

Query: 302 KVAASCEEVKAALATKISRERIGVEIDLMMA 321
            VA S +E+ ++L  ++   RI +EI+ M+A
Sbjct: 278 -VAISVKELSSSL-LRLDPSRIRMEINYMLA 304

BLAST of Cp4.1LG01g21510 vs. TAIR10
Match: AT5G23690.1 (AT5G23690.1 Polynucleotide adenylyltransferase family protein)

HSP 1 Score: 53.5 bits (127), Expect = 4.9e-07
Identity = 59/226 (26.11%), Postives = 95/226 (42.04%), Query Frame = 1

Query: 105 VAGGWVRDKLLGKDCYDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPN- 164
           + GG VRD +L +   D DI                  LT  E  + V   P  E +   
Sbjct: 99  LVGGCVRDLILKRTPKDFDI------------------LTSAELREVVRTFPRCEIVGRR 158

Query: 165 FELCFSSNPEQSKHLETARMRIFD--IWIDFVNLRCEEYSENSRIPTKQKFGT-AEEDAY 224
           F +C               + I D  I +   +   +  S N+R   K+  G+  +ED  
Sbjct: 159 FPIC--------------HVHIGDDLIEVSSFSTSAQNSSRNTRTECKESSGSDGDEDCI 218

Query: 225 R------RDLTINSLFYNINSSLVEDMTKRGISDLKFGKIVTPLPPKATFMDDPLRVLRA 284
           R      RD TIN L ++  + +V D    G+ D++  K+ T +    +F  D  R+LRA
Sbjct: 219 RLNNCLQRDFTINGLMFDPYAKVVYDYLG-GMEDIRKAKVRTVIHAGTSFHQDCARILRA 278

Query: 285 IRFCARFEFTLDEELKVAASCEEVKAALATKISRERIGVEIDLMMA 321
           IR  AR  F + +E    A   +  + L  ++ + RI +E++ M+A
Sbjct: 279 IRIAARLGFRMSKE---TAHFIKNLSLLVQRLDKGRILMEMNYMLA 288

BLAST of Cp4.1LG01g21510 vs. TAIR10
Match: AT2G17580.1 (AT2G17580.1 Polynucleotide adenylyltransferase family protein)

HSP 1 Score: 50.1 bits (118), Expect = 5.4e-06
Identity = 34/103 (33.01%), Postives = 59/103 (57.28%), Query Frame = 1

Query: 218 DAYRRDLTINSLFYNINSSLVEDMTKRGISDLKFGKIVTPLPPKATFMDDPLRVLRAIRF 277
           ++ +RD TINSLFYN     + D    G+ DL   K+ T +P   +F +D  R+LR +R 
Sbjct: 201 NSLQRDFTINSLFYNPFDFTIYDYA-NGMEDLTDLKLRTLVPAHLSFKEDCARILRGLRI 260

Query: 278 CARFEFTLDEELKVAASCEEVKAALATKISRERIGVEIDLMMA 321
            AR   +L +++K A    E  +++A  + + R+ +E++ M+A
Sbjct: 261 AARLGLSLSKDVKTA--IPEFVSSVA-NLDQFRLIMEMNYMLA 299

BLAST of Cp4.1LG01g21510 vs. NCBI nr
Match: gi|659113646|ref|XP_008456684.1| (PREDICTED: putative CCA tRNA nucleotidyltransferase 2 isoform X2 [Cucumis melo])

HSP 1 Score: 911.8 bits (2355), Expect = 6.1e-262
Identity = 460/560 (82.14%), Postives = 498/560 (88.93%), Query Frame = 1

Query: 7   MRVFKSFKIALKLDALVLPPFSFRSSIARFSTSLGAPKYPRTTRPPLILSTKSMASSISS 66
           M++  S K+ LKL +L++P  S  +S+ +FS      K+P T  P    S KSMA+++SS
Sbjct: 1   MKLLFSLKLPLKLHSLIIPSLSIPTSLLKFSPPHPPLKFPTTRFP----SPKSMATAMSS 60

Query: 67  PKPVVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDCYDIDIAL 126
           PKP+VQVKD IELTE EEKIF+RLLGTLRHFNL+TQLRVAGGWVRDKLLGKDCYDIDIAL
Sbjct: 61  PKPLVQVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIAL 120

Query: 127 DNMLGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETARMRIF 186
           DNMLGSEFVDKVREYLLTVGEEAQGVAVIPC             NP+QSKHLETARMRIF
Sbjct: 121 DNMLGSEFVDKVREYLLTVGEEAQGVAVIPC-------------NPDQSKHLETARMRIF 180

Query: 187 DIWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGI 246
           D+WIDFVNLRCEEYSEN RIPTKQKFGTAEEDAYRRDLTINSLFYNIN S+VED TKRGI
Sbjct: 181 DMWIDFVNLRCEEYSENRRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGI 240

Query: 247 SDLKFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKI 306
           SDLKFGKIVTPLP KATFMDDPLRVLRAIRFCARFEFTLDEELK AA+CEEVKAALA KI
Sbjct: 241 SDLKFGKIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKI 300

Query: 307 SRERIGVEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIACQEAT 366
           SRERIGVEIDLM+AGNQPVKAMSYI DLTLFWTVFTLPSNTEPEI +VCNRLCIAC +AT
Sbjct: 301 SRERIGVEIDLMIAGNQPVKAMSYISDLTLFWTVFTLPSNTEPEISEVCNRLCIACLDAT 360

Query: 367 WNLLQLIKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKRKVSDA 426
           WNL+Q I C TF+DEQKRLS+YA+LFLP RKFTFKDKKSKKIPVVN+IFR+SLKRKVSDA
Sbjct: 361 WNLIQHINCFTFSDEQKRLSLYASLFLPFRKFTFKDKKSKKIPVVNYIFRDSLKRKVSDA 420

Query: 427 ETVVQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVECADVPDTSRIRVLTGLLLREIKDF 486
           ETVV +H  LEKFL+LIPLLVSKEEIQPNG DWGVECADVP TSRIRVLTGLLLREIKDF
Sbjct: 421 ETVVNVHQTLEKFLSLIPLLVSKEEIQPNGFDWGVECADVPATSRIRVLTGLLLREIKDF 480

Query: 487 WPVALLLATLLYPANVDYTEDLLNRRFELEKRTELFDVAYNEIVKLGLQNVWEVKPLVNG 546
           WPVALL+ATLLYPANVDY +DLLN+ FELEKR ELFDV YNE VKLGL+NVWE+KPLVNG
Sbjct: 481 WPVALLMATLLYPANVDYAQDLLNQNFELEKRKELFDVIYNETVKLGLENVWEMKPLVNG 540

Query: 547 KEIMNILQLKSGGPLVREWV 567
           KEIMNILQLK+GGPLVREW+
Sbjct: 541 KEIMNILQLKAGGPLVREWL 543

BLAST of Cp4.1LG01g21510 vs. NCBI nr
Match: gi|659113644|ref|XP_008456683.1| (PREDICTED: putative CCA tRNA nucleotidyltransferase 2 isoform X1 [Cucumis melo])

HSP 1 Score: 911.4 bits (2354), Expect = 8.0e-262
Identity = 460/559 (82.29%), Postives = 497/559 (88.91%), Query Frame = 1

Query: 7   MRVFKSFKIALKLDALVLPPFSFRSSIARFSTSLGAPKYPRTTRPPLILSTKSMASSISS 66
           M++  S K+ LKL +L++P  S  +S+ +FS      K+P T  P    S KSMA+++SS
Sbjct: 1   MKLLFSLKLPLKLHSLIIPSLSIPTSLLKFSPPHPPLKFPTTRFP----SPKSMATAMSS 60

Query: 67  PKPVVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDCYDIDIAL 126
           PKP+VQVKD IELTE EEKIF+RLLGTLRHFNL+TQLRVAGGWVRDKLLGKDCYDIDIAL
Sbjct: 61  PKPLVQVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIAL 120

Query: 127 DNMLGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETARMRIF 186
           DNMLGSEFVDKVREYLLTVGEEAQGVAVIPC             NP+QSKHLETARMRIF
Sbjct: 121 DNMLGSEFVDKVREYLLTVGEEAQGVAVIPC-------------NPDQSKHLETARMRIF 180

Query: 187 DIWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGI 246
           D+WIDFVNLRCEEYSEN RIPTKQKFGTAEEDAYRRDLTINSLFYNIN S+VED TKRGI
Sbjct: 181 DMWIDFVNLRCEEYSENRRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGI 240

Query: 247 SDLKFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKI 306
           SDLKFGKIVTPLP KATFMDDPLRVLRAIRFCARFEFTLDEELK AA+CEEVKAALA KI
Sbjct: 241 SDLKFGKIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKI 300

Query: 307 SRERIGVEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIACQEAT 366
           SRERIGVEIDLM+AGNQPVKAMSYI DLTLFWTVFTLPSNTEPEI +VCNRLCIAC +AT
Sbjct: 301 SRERIGVEIDLMIAGNQPVKAMSYISDLTLFWTVFTLPSNTEPEISEVCNRLCIACLDAT 360

Query: 367 WNLLQLIKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKRKVSDA 426
           WNL+Q I C TF+DEQKRLS+YA+LFLP RKFTFKDKKSKKIPVVN+IFR+SLKRKVSDA
Sbjct: 361 WNLIQHINCFTFSDEQKRLSLYASLFLPFRKFTFKDKKSKKIPVVNYIFRDSLKRKVSDA 420

Query: 427 ETVVQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVECADVPDTSRIRVLTGLLLREIKDF 486
           ETVV +H  LEKFL+LIPLLVSKEEIQPNG DWGVECADVP TSRIRVLTGLLLREIKDF
Sbjct: 421 ETVVNVHQTLEKFLSLIPLLVSKEEIQPNGFDWGVECADVPATSRIRVLTGLLLREIKDF 480

Query: 487 WPVALLLATLLYPANVDYTEDLLNRRFELEKRTELFDVAYNEIVKLGLQNVWEVKPLVNG 546
           WPVALL+ATLLYPANVDY +DLLN+ FELEKR ELFDV YNE VKLGL+NVWE+KPLVNG
Sbjct: 481 WPVALLMATLLYPANVDYAQDLLNQNFELEKRKELFDVIYNETVKLGLENVWEMKPLVNG 540

Query: 547 KEIMNILQLKSGGPLVREW 566
           KEIMNILQLK+GGPLVREW
Sbjct: 541 KEIMNILQLKAGGPLVREW 542

BLAST of Cp4.1LG01g21510 vs. NCBI nr
Match: gi|778710608|ref|XP_004140936.2| (PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Cucumis sativus])

HSP 1 Score: 905.6 bits (2339), Expect = 4.4e-260
Identity = 457/559 (81.75%), Postives = 493/559 (88.19%), Query Frame = 1

Query: 7   MRVFKSFKIALKLDALVLPPFSFRSSIARFSTSLGAPKYPRTTRPPLILSTKSMASSISS 66
           M++  S  + LKL +L++P  SF +S  +F       K+P T  P    S KSM ++ISS
Sbjct: 1   MKLLFSLNLPLKLHSLIIPSLSFPTSFLKFPPPHSPFKFPTTRFP----SPKSMTTAISS 60

Query: 67  PKPVVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDCYDIDIAL 126
           PKP+VQVKD IELTE EEKIF+RLLGTLRHFNL+TQLRVAGGWVRDKLLGKDCYDIDIAL
Sbjct: 61  PKPLVQVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIAL 120

Query: 127 DNMLGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETARMRIF 186
           DNMLGSEFVDKVREYLLTVGEEAQGVAVIPC             NP+QSKHLETARMRIF
Sbjct: 121 DNMLGSEFVDKVREYLLTVGEEAQGVAVIPC-------------NPDQSKHLETARMRIF 180

Query: 187 DIWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGI 246
           D+WIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNIN S+VED TKRGI
Sbjct: 181 DMWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGI 240

Query: 247 SDLKFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKI 306
           SDLKFGKIVTPLP KATFMDDPLRVLRAIRFCARFEFTLDEELK AA+CEEVKAALA KI
Sbjct: 241 SDLKFGKIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKI 300

Query: 307 SRERIGVEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIACQEAT 366
           SRERIGVEIDLM+AGNQPVKAMSYI DLTLFWTVFTLPSN EPEI +VCNRLC+AC +AT
Sbjct: 301 SRERIGVEIDLMIAGNQPVKAMSYISDLTLFWTVFTLPSNIEPEISEVCNRLCVACLDAT 360

Query: 367 WNLLQLIKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKRKVSDA 426
           WNL+Q I C TF+DEQKRLS YA+ FLP RKFTFKDKKSKKIP+VN+IFR+SLKRK SDA
Sbjct: 361 WNLIQHINCFTFSDEQKRLSFYASPFLPFRKFTFKDKKSKKIPIVNYIFRDSLKRKASDA 420

Query: 427 ETVVQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVECADVPDTSRIRVLTGLLLREIKDF 486
           ETVV +H ALEKFL+LIPLLVSKEEIQPNGVDWGVECADVP TSRIRVLTGLLLREIKDF
Sbjct: 421 ETVVNVHQALEKFLSLIPLLVSKEEIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDF 480

Query: 487 WPVALLLATLLYPANVDYTEDLLNRRFELEKRTELFDVAYNEIVKLGLQNVWEVKPLVNG 546
           WPVALL+ATLLYPA+VDY +DLLNR FELEKR ELFD  YNEIVKLGL+NVWE+KPLVNG
Sbjct: 481 WPVALLMATLLYPADVDYAQDLLNRHFELEKRKELFDDVYNEIVKLGLENVWEMKPLVNG 540

Query: 547 KEIMNILQLKSGGPLVREW 566
           KEIMNILQLK+GGPLVREW
Sbjct: 541 KEIMNILQLKAGGPLVREW 542

BLAST of Cp4.1LG01g21510 vs. NCBI nr
Match: gi|645218421|ref|XP_008230536.1| (PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Prunus mume])

HSP 1 Score: 730.7 bits (1885), Expect = 1.9e-207
Identity = 365/527 (69.26%), Postives = 428/527 (81.21%), Query Frame = 1

Query: 45  YPRTTRPPLILSTKSMASS-----ISSP-KPVVQVKDKIELTEIEEKIFNRLLGTLRHFN 104
           YP  + P     TK+   S     ++ P +P VQV+D IEL E E+KIF+RLLGT+RHF 
Sbjct: 25  YPHPSLPISWFPTKTRVFSPCRAIMAVPSRPTVQVRDNIELNETEKKIFDRLLGTVRHFG 84

Query: 105 LETQLRVAGGWVRDKLLGKDCYDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCL 164
           L+ QLRVAGGWVRDKLLGKDCYDIDIALDNMLGSEFV+KVR+YLL VGEEAQG+AVIPC 
Sbjct: 85  LQNQLRVAGGWVRDKLLGKDCYDIDIALDNMLGSEFVEKVRDYLLHVGEEAQGIAVIPC- 144

Query: 165 EAIPNFELCFSSNPEQSKHLETARMRIFDIWIDFVNLRCEEYSENSRIPTKQKFGTAEED 224
                       NPEQSKHLETARMRI D WIDFVNLRCEEY ENSRIPT QK+GTAEED
Sbjct: 145 ------------NPEQSKHLETARMRICDTWIDFVNLRCEEYCENSRIPTVQKYGTAEED 204

Query: 225 AYRRDLTINSLFYNINSSLVEDMTKRGISDLKFGKIVTPLPPKATFMDDPLRVLRAIRFC 284
           AYRRDLTINSLFYNIN+S +ED TKRGI+DLK GKIVTPLPPK+TFMDDPLRVLRAIRF 
Sbjct: 205 AYRRDLTINSLFYNINTSSIEDYTKRGIADLKSGKIVTPLPPKSTFMDDPLRVLRAIRFG 264

Query: 285 ARFEFTLDEELKVAASCEEVKAALATKISRERIGVEIDLMMAGNQPVKAMSYICDLTLFW 344
           ARF F LDEELK AASC+EVKAAL+ KISRERIG EIDLM++GNQPV+AM+YICDL LFW
Sbjct: 265 ARFGFILDEELKEAASCDEVKAALSAKISRERIGTEIDLMISGNQPVQAMTYICDLKLFW 324

Query: 345 TVFTLPSNTEPEIPDVCNRLCIACQEATWNLLQLIKCVTFNDEQKRLSMYAALFLPIRKF 404
            VF+L    EP +P+ C+RLC+A  +ATWNL+QLI   TFNDEQ+RL++Y A+FLP+RK 
Sbjct: 325 VVFSLHPKYEPAVPEGCDRLCVAYLDATWNLIQLIGNSTFNDEQRRLALYTAMFLPLRKT 384

Query: 405 TFKDKKSKKIPVVNHIFRESLKRKVSDAETVVQLHHALEKFLTLIPLLVSKEEIQPNGVD 464
            +KD K+KKIPVV++IFR+SLKRKVSDAETV+ +H+A EKFL LIP   S E++    VD
Sbjct: 385 VYKDNKAKKIPVVSYIFRDSLKRKVSDAETVINVHYAFEKFLPLIPYFASNEDVLLTEVD 444

Query: 465 WGVECADVPDTSRIRVLTGLLLREIKDFWPVALLLATLLYPANVDYTEDLLNRRFELEKR 524
           W  E  DVP  S+ RVLTG LLRE+KDFW VALL++TL+YP N+D TEDLLN+ FELE+R
Sbjct: 445 WEREFVDVPLASKSRVLTGFLLRELKDFWRVALLMSTLVYPRNIDCTEDLLNKNFELERR 504

Query: 525 TELFDVAYNEIVKLGLQNVWEVKPLVNGKEIMNILQLKSGGPLVREW 566
             LF  A + ++KLGL  +W++KPLVNG++IMN+LQLKSGGPLVREW
Sbjct: 505 RSLFKAAEDAVLKLGLDKIWDIKPLVNGRDIMNVLQLKSGGPLVREW 538

BLAST of Cp4.1LG01g21510 vs. NCBI nr
Match: gi|595823249|ref|XP_007205038.1| (hypothetical protein PRUPE_ppa004187mg [Prunus persica])

HSP 1 Score: 729.9 bits (1883), Expect = 3.3e-207
Identity = 359/498 (72.09%), Postives = 416/498 (83.53%), Query Frame = 1

Query: 68  KPVVQVKDKIELTEIEEKIFNRLLGTLRHFNLETQLRVAGGWVRDKLLGKDCYDIDIALD 127
           +P VQV+DKIEL E E+KIF+RLLGT+RHF L+ QLRVAGGWVRDKLLGKDCYDIDIALD
Sbjct: 6   RPTVQVRDKIELNETEKKIFDRLLGTVRHFGLQNQLRVAGGWVRDKLLGKDCYDIDIALD 65

Query: 128 NMLGSEFVDKVREYLLTVGEEAQGVAVIPCLEAIPNFELCFSSNPEQSKHLETARMRIFD 187
           NMLGSEFV+KVR+YLL VGEEAQG+AVIPC             NPEQSKHLETARMRI D
Sbjct: 66  NMLGSEFVEKVRDYLLHVGEEAQGIAVIPC-------------NPEQSKHLETARMRICD 125

Query: 188 IWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINSSLVEDMTKRGIS 247
            WIDFVNLRCEEY ENSRIPT QK+GTAEEDAYRRDLTINSLFYNIN+S +ED TKRGI+
Sbjct: 126 TWIDFVNLRCEEYCENSRIPTVQKYGTAEEDAYRRDLTINSLFYNINTSSIEDYTKRGIA 185

Query: 248 DLKFGKIVTPLPPKATFMDDPLRVLRAIRFCARFEFTLDEELKVAASCEEVKAALATKIS 307
           DLK GKIVTPLPPK+TFMDDPLRVLRAIRF ARF F LDEELK AASC+EVKAAL+ KIS
Sbjct: 186 DLKSGKIVTPLPPKSTFMDDPLRVLRAIRFGARFGFILDEELKEAASCDEVKAALSAKIS 245

Query: 308 RERIGVEIDLMMAGNQPVKAMSYICDLTLFWTVFTLPSNTEPEIPDVCNRLCIACQEATW 367
           RERIG EIDLM++GNQPV+AM+YICDL LFW VF+L    EP + + C+RLC+A  +ATW
Sbjct: 246 RERIGTEIDLMISGNQPVQAMAYICDLKLFWVVFSLHPKYEPAVSEGCDRLCLAYLDATW 305

Query: 368 NLLQLIKCVTFNDEQKRLSMYAALFLPIRKFTFKDKKSKKIPVVNHIFRESLKRKVSDAE 427
           NL+QLI   TFNDEQ+RL++Y A+FLP+RK  +KD K+KKIPVVN+IFR+SLKRKVSDAE
Sbjct: 306 NLIQLIGNSTFNDEQRRLALYTAMFLPLRKTVYKDNKAKKIPVVNYIFRDSLKRKVSDAE 365

Query: 428 TVVQLHHALEKFLTLIPLLVSKEEIQPNGVDWGVECADVPDTSRIRVLTGLLLREIKDFW 487
           TV+ +H+A EKFL LIP   S E++    VDW  E  DVP  S+ RVLTG LLRE+KDFW
Sbjct: 366 TVINVHYAFEKFLPLIPYFASNEDVLLTEVDWEREFVDVPLASKPRVLTGFLLRELKDFW 425

Query: 488 PVALLLATLLYPANVDYTEDLLNRRFELEKRTELFDVAYNEIVKLGLQNVWEVKPLVNGK 547
            VALL++ L+YP N+D TEDLLN+ FELE+R  LF  A + ++KLGL  +W+VKPLVNG+
Sbjct: 426 RVALLMSMLVYPHNIDCTEDLLNKNFELERRRSLFKAAEDAVLKLGLDKIWDVKPLVNGR 485

Query: 548 EIMNILQLKSGGPLVREW 566
           +IMN+LQLKSGGPLVREW
Sbjct: 486 DIMNVLQLKSGGPLVREW 490

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CCA1_CANGA5.9e-6332.43CCA tRNA nucleotidyltransferase, mitochondrial OS=Candida glabrata (strain ATCC ... [more]
CCA2_SCHPO3.6e-6033.93Putative CCA tRNA nucleotidyltransferase 2 OS=Schizosaccharomyces pombe (strain ... [more]
CCA1_YEAST1.1e-5644.03CCA tRNA nucleotidyltransferase, mitochondrial OS=Saccharomyces cerevisiae (stra... [more]
CCA1_SCHPO2.6e-5031.53Putative CCA tRNA nucleotidyltransferase 1 OS=Schizosaccharomyces pombe (strain ... [more]
PCNB_ECOL69.9e-1032.14Poly(A) polymerase I OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UP... [more]
Match NameE-valueIdentityDescription
A0A0A0KEA1_CUCSA3.1e-26081.75Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052120 PE=3 SV=1[more]
M5VXR0_PRUPE2.3e-20772.09Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004187mg PE=3 SV=1[more]
A0A0D2QNL2_GOSRA1.8e-20465.65Uncharacterized protein OS=Gossypium raimondii GN=B456_009G263600 PE=3 SV=1[more]
A0A0B0N6J4_GOSAR6.9e-20466.37Cca trna nucleotidyltransferase, mitochondrial OS=Gossypium arboreum GN=F383_108... [more]
A0A061FK21_THECC4.5e-20365.60Polynucleotide adenylyltransferase family protein isoform 1 OS=Theobroma cacao G... [more]
Match NameE-valueIdentityDescription
AT1G22660.11.1e-16058.12 Polynucleotide adenylyltransferase family protein[more]
AT1G28090.14.0e-0930.46 Polynucleotide adenylyltransferase family protein[more]
AT5G23690.14.9e-0726.11 Polynucleotide adenylyltransferase family protein[more]
AT2G17580.15.4e-0633.01 Polynucleotide adenylyltransferase family protein[more]
Match NameE-valueIdentityDescription
gi|659113646|ref|XP_008456684.1|6.1e-26282.14PREDICTED: putative CCA tRNA nucleotidyltransferase 2 isoform X2 [Cucumis melo][more]
gi|659113644|ref|XP_008456683.1|8.0e-26282.29PREDICTED: putative CCA tRNA nucleotidyltransferase 2 isoform X1 [Cucumis melo][more]
gi|778710608|ref|XP_004140936.2|4.4e-26081.75PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Cucumis sativus][more]
gi|645218421|ref|XP_008230536.1|1.9e-20769.26PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Prunus mume][more]
gi|595823249|ref|XP_007205038.1|3.3e-20772.09hypothetical protein PRUPE_ppa004187mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016779nucleotidyltransferase activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: INTERPRO
TermDefinition
IPR002646PolA_pol_head_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009630 gravitropism
biological_process GO:0001680 tRNA 3'-terminal CCA addition
biological_process GO:0006486 protein glycosylation
biological_process GO:0036065 fucosylation
biological_process GO:0008033 tRNA processing
biological_process GO:0006396 RNA processing
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0032580 Golgi cisterna membrane
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0052927 CTP:tRNA cytidylyltransferase activity
molecular_function GO:0052928 CTP:3'-cytidine-tRNA cytidylyltransferase activity
molecular_function GO:0052929 ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity
molecular_function GO:0004810 tRNA adenylyltransferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0008417 fucosyltransferase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g21510.1Cp4.1LG01g21510.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002646Poly A polymerase, head domainPFAMPF01743PolyA_polcoord: 103..254
score: 5.8
NoneNo IPR availableGENE3DG3DSA:1.10.3090.10coord: 252..444
score: 5.7
NoneNo IPR availableGENE3DG3DSA:3.30.460.10coord: 81..250
score: 7.1
NoneNo IPR availablePANTHERPTHR13734TRNA-NUCLEOTIDYLTRANSFERASE/POLY A POLYMERASE FAMILY MEMBERcoord: 13..566
score: 3.4E
NoneNo IPR availablePANTHERPTHR13734:SF5CCA TRNA NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIALcoord: 13..566
score: 3.4E
NoneNo IPR availableunknownSSF81301Nucleotidyltransferasecoord: 80..250
score: 4.69
NoneNo IPR availableunknownSSF81891Poly A polymerase C-terminal region-likecoord: 467..564
score: 4.22E-32coord: 254..440
score: 4.22