Cp4.1LG01g19050 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g19050
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ileal sodium/bile acid cotransporter, putative
Location	Cp4.1LG01 : 16208587 .. 16212568 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCGTATATAAAAAGGGAACTCCCAGATTGAATGGAACTTAGGGAAACCACTTGAAGAACATTGACCAAATCCTTATTGTTTCCCCCCAATGGATTCAGCCACACAACAAGAAACCTCCCTGGATATGAGTAGTCTTACCTGGGGATGGGGATTATCCACGCCATTAGAATTCCAGTCAATTAACATCAAAATGCATAGCCCTAGGCCTCAACCAGCCAACAGCCCTCAGAATCTTGGGAAGATAAACCTTGTTCTCGCTTTTCAGGCAATTTTACCTTTGTCCATCAGTGCTCCCACTCGATCTTCTCCGCTTCCCACAGGTCTATTTGTTGCTGTTATGTTGATCAGCTTTGCAGTTTCGTATGCTGGAGTTTTCCTTAAGAATGCATTCCCAAGATTTGCACTTCTCTTGGAAAAACTCGGTACTCTTTTTCTTGCAATTGGCGTCTGCATAATATCAGGAGGTCTACTAGTCCCTCAAAGCTACGCTTGGATCTGTTGGTTGGCAGGTGGCTGCTCCTGCTTGCTACCNGGTAATGGACAAAACGAAGGCATCAAAGGCAGAGGAAGGACTGGATAAGCCATCGAAAATCAAACCAACCCCCCCTCCCTCACTTCTTCCAGATAATATCAACAAGATTGAGAGAGTGTTCAAAGACAAATACAAAATGGGCTTCAAAAGTATTGTCAACGGAGGGACGAAAGCATTTTGGTCTGATTTCATCATCTCCCTCATGTTCGTTACATTCAGAGAGGAAGAAGAAGGAATACCTCAGCTCATTATAGCTATTTTGCACATCTTATAACCTTAAGTAGGAAGCGTTTAGGAAATTTCCTGGAAATTACGGAAGGGAACAACTTGCTCCCCAAGTCGTTTGAGAAATTTCCCTAAAGGACTAGAGTGGGATGTGGGGCCAAAGGGCTATGATTGTCCTTTTTAAACCAATATATATTTATATAGATAACTAAACTTTAAAAGCATTTCCACACCAATTGATAAAAATTTCCACAAAATCAACTTTCTTTTTTTTTAAGAATAAAACTTGTAGGAGAATCAGTGAAACTTCCCCCCTATATTCCAGAATTCTCCATGCAGCGTATATAAAAAGGGAACTCCCAGATTGAATGGAACTTAGGGAAACCACTTGAAGAACATTGACCAAATCCTTATTGTTTCCCCCCAATGGATTCAGCCACACAACAAGAAACCTCCCTGGATATGAGTAGTCTTACCTGGGGATGGGGATTATCCACGCCATTAGAATTCCAGTCAATTAACATCAAAATGCATAGCCCTAGGCCTCAACCAGCCAACAGCCCTCAGAATCTTGGGAAGATAAACCTTGTTCTCGCTTTTCAGGCAATTTTACCTTTGTCCATCAGTGCTCCCACTCGATCTTCTCCGCTTCCCACAGGTCTATTTGTTGCTGTTATGTTGATCAGCTTTGCAGTTTCGTATGCTGGAGTTTTCCTTAAGAATGCATTCCCAAGATTTGCACTTCTCTTGGAAAAACTCGGTACTCTTTTTCTTGCAATTGGCGTCTGCATAATATCAGGAGGTCTACTAGTCCCTCAAAGCTACGCTTGGATCTGTTGGTTGGCAGGTGGCTGCTCCTGCTTGCTACCCTTTATCATCTCATTCATGTGATTTCGACAGAAGATGCACTGAGTCCATGCCCATGTGTGTGTGTGTGTGTGTGTGGTTTGTGTGTGTGGTTTGTGTGTGTGTTTGTGTGTTTAGTTTAACCTCTTTTACAGTCTCTTAGTCTACAACTTACAATGACATGATAACTCTGCCTGTGTCATGCATCAAGCATCAATTCTTCTACGCAGCCGGTCCCAAGCCCGGAACAAAGGAGGAGGGTGGTGTCATCAGACCATTGGAACTTCAGCTTGTTCTGAAATTGTAGCTGTCAGTATTTTCATTTTAGTAGTAGTAATAAAGATGGCAGCTTCGCAATAGATGGGAGTAACCACATATTGCTGGAGCTTAGCCATCACCTAAGGTCTGAAGTCTTGTACTAGAAATGTGTGTTGAGTCGTGCAATTAATAGTAGAATGGGCATCTTTATGTTGTTTTATATTACATATTACATGAGTCCTACACAAACATACACACGAGAAGAACTACAACGACAAATGAACACCAGCCCAAAACAAGAAAGATTACGTAAGAGAATCTCATTTCATAAGATGGAAACCAAATTGAAACACCATAAGATGGAAACCAGTAAAACAGCTAAGCAATCAGAGAACTTTGAAGACCAGAATGATATAAAGCTCCACATCAGTTTCAGATGACAAAGTTTTCATCATTTTGCCTTACTTCTCTTACAGCAAGCTCATCAACTCAATACAACAAGCACAACATATATTCTCTGGTAAGGAGGGTAAGAATCTAAGCCCACCACGCGCAGATATGATCAACTTTAGCCTCTTACAACGTAAAGATTGTAAGAATTCAGACCTCAAACTGAGGTCACGAGCCTATTGGGGAGAGGTTTCCTTACCCACCTCAAACCGAGGTCACGAGCCTATTGGGGAGAGGTTTCCATACCCACCCCAAACTGAGGTAACGAGCCTACTGGAGAGAGGTTTCCATACCCACCCCAAACCGAGGTAACGAGCCTACTGGGGAGAGATTTCCATATCCACCCCAAATTGAGGTAACAAGCCTACTGGAGAGAGGTTTCCATACCCATCCCAAACCGAGGTAACGAGCCTACTGGGGATTGATTTCTATACCCACCCCAAACCTTGGTAACGAGCCTACTGGGGAGAGGTTTCCATACCCACCCCAAACCTTGGTAACGAGCCTACTGGGGAGAGGTTTCCATACCCACCCCAAACCTTGGTAACGAGCCTACTGGGGAGAGGTTTCCATACCCACCCCAAACCTTGGTAACGAGCCTACTGGGGAGAGGTTTCCATACCCACCCCAAACCTTGGTAACGAGCCTACTGGGGAGAGGTTTCCATACCCACCCCAAACCTTGGTAACGAGCCTACTGGGGAGAGGTTTCCATACCCACCCCAAACCTTGGTAACGAGCCTACTGGGGAGAGGTTTCCATACCCACCCCAAACCTTGGTAACGAGCCTACTGGGGAGAGGTTTACACACCCTCCCCAAACCTTGGTAACGAGCCTACTGGGGAGAGGTTTTCAGACCCTCCCCAATCTTGGCAACGAGCCTACTGGAGAGAGGTTTCCATACCCTCCCCAAACCGAGGTAACAAGCCTACTGGGAGAGGTTTCCATTCTCTCCCGAAGGTTTCTATTCCCTCCCAACTGAAGTTGAATCTCCTATAGAAACAAAAATGATTTGTTTATCGGATGCAAGATCTATCATAGATACAAACAAAATCTGCATCGATTCAACCAAAATCATAATTTCTCTATAATTAAAATTCAAAATCATAATTTCTCTATAATTAAAATTCATGAGAGACAACAACAAAATCTAACGCCAAGTATCAGGCAACCGTAAGCAGAAAACTTGGAAGGCATTGAAAGATACGAGTTAGGCACATAATCTTGAATGGCCAATCAAAGACTGAAATTGGAGTAAAGTATTTGTACTCCCTCTTAATTAAATTAAGTTCGAAGAAGAATTACTGGTATCAATTAAACTCTTATTTTTATAAATTAACAACTCTCCCTTTGCAAATTACAAAATATTGCATATTAATTTTTTTTTTAAATAAATGATTTAGGCCTTCTTCTTTGTGGGATTCAATCGCAACAATAATTGATTCGTAGAGAAAAACACCTTAAATTCTTACATTCACCTCGATACCTAATAAAAAAGTAATTTTTGTAATTGGCACAGTTTATTATATATAATTAATATATTTCAAAGTTAAAAAGGTATATAATTAAATAAAAATTAAAAATGAATATATTATGCAGTAAAACTCTTAAATTTATTATATTTTAGCTAATTTTAGACTAAAACCCTTAAGATAAAGGATAAATAA

mRNA sequence

ATGCAGCCCACACAACAAGAAACCTCCCTGGATATGAGTAGTCTTACCTGGGGATGGGGATTATCCACGCCATTAGAATTCCAGTCAATTAACATCAAAATGCATAGCCCTAGGCCTCAACCAGCCAACAGCCCTCAGAATCTTGGGAAGATAAACCTTGTTCTCGCTTTTCAGGCAATTTTACCTTTGTCCATCAGTGCTCCCACTCGATCTTCTCCGCTTCCCACAGGTCTATTTGTTGCTGTTATGTTGATCAGCTTTGCAGTTTCGTATGCTGGAGTTTTCCTTAAGAATGCATTCCCAAGATTTGCACTTCTCTTGGAAAAACTCGGTACTCTTTTTCTTGCAATTGGCGTCTGCATAATATCAGGAGGTCTACTAGTCCCTCAAAGCTACGCTTGGATCTGTTGGTTGGCAGCCACACAACAAGAAACCTCCCTGGATATGAGTAGTCTTACCTGGGGATGGGGATTATCCACGCCATTAGAATTCCAGTCAATTAACATCAAAATGCATAGCCCTAGGCCTCAACCAGCCAACAGCCCTCAGAATCTTGGGAAGATAAACCTTGTTCTCGCTTTTCAGGCAATTTTACCTTTGTCCATCAGTGCTCCCACTCGATCTTCTCCGCTTCCCACAGGTCTATTTGTTGCTGTTATGTTGATCAGCTTTGCAGTTTCGTATGCTGGAGTTTTCCTTAAGAATGCATTCCCAAGATTTGCACTTCTCTTGGAAAAACTCGGTACTCTTTTTCTTGCAATTGGCGTCTGCATAATATCAGGAGGTCTACTAGTCCCTCAAAGCTACGCTTGGATCTGTTGGTTGGCAGCAAGCTCATCAACTCAATACAACAAGCACAACATATATTCTCTGACTAAAACCCTTAAGATAAAGGATAAATAA

Coding sequence (CDS)

ATGCAGCCCACACAACAAGAAACCTCCCTGGATATGAGTAGTCTTACCTGGGGATGGGGATTATCCACGCCATTAGAATTCCAGTCAATTAACATCAAAATGCATAGCCCTAGGCCTCAACCAGCCAACAGCCCTCAGAATCTTGGGAAGATAAACCTTGTTCTCGCTTTTCAGGCAATTTTACCTTTGTCCATCAGTGCTCCCACTCGATCTTCTCCGCTTCCCACAGGTCTATTTGTTGCTGTTATGTTGATCAGCTTTGCAGTTTCGTATGCTGGAGTTTTCCTTAAGAATGCATTCCCAAGATTTGCACTTCTCTTGGAAAAACTCGGTACTCTTTTTCTTGCAATTGGCGTCTGCATAATATCAGGAGGTCTACTAGTCCCTCAAAGCTACGCTTGGATCTGTTGGTTGGCAGCCACACAACAAGAAACCTCCCTGGATATGAGTAGTCTTACCTGGGGATGGGGATTATCCACGCCATTAGAATTCCAGTCAATTAACATCAAAATGCATAGCCCTAGGCCTCAACCAGCCAACAGCCCTCAGAATCTTGGGAAGATAAACCTTGTTCTCGCTTTTCAGGCAATTTTACCTTTGTCCATCAGTGCTCCCACTCGATCTTCTCCGCTTCCCACAGGTCTATTTGTTGCTGTTATGTTGATCAGCTTTGCAGTTTCGTATGCTGGAGTTTTCCTTAAGAATGCATTCCCAAGATTTGCACTTCTCTTGGAAAAACTCGGTACTCTTTTTCTTGCAATTGGCGTCTGCATAATATCAGGAGGTCTACTAGTCCCTCAAAGCTACGCTTGGATCTGTTGGTTGGCAGCAAGCTCATCAACTCAATACAACAAGCACAACATATATTCTCTGACTAAAACCCTTAAGATAAAGGATAAATAA

Protein sequence

MQPTQQETSLDMSSLTWGWGLSTPLEFQSINIKMHSPRPQPANSPQNLGKINLVLAFQAILPLSISAPTRSSPLPTGLFVAVMLISFAVSYAGVFLKNAFPRFALLLEKLGTLFLAIGVCIISGGLLVPQSYAWICWLAATQQETSLDMSSLTWGWGLSTPLEFQSINIKMHSPRPQPANSPQNLGKINLVLAFQAILPLSISAPTRSSPLPTGLFVAVMLISFAVSYAGVFLKNAFPRFALLLEKLGTLFLAIGVCIISGGLLVPQSYAWICWLAASSSTQYNKHNIYSLTKTLKIKDK

Homology

[Close]

BLAST of Cp4.1LG01g19050 vs. TrEMBL
Match: A0A0A0KJP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G137410 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-22
Identity = 72/155 (46.45%), Postives = 94/155 (60.65%), Query Frame = 1


Query: 138 LAATQQETSLDMSSLT----------WGWGLS-TPLEFQSINIKMHSPRPQPANSPQNLG 197
           +A+T  +TSLDMS+ +          +G G   TP     + I+M       A+S Q LG
Sbjct: 1   MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG 60

Query: 198 KINLVLAFQAILPLSISAP-TRSSPLPTGLFVAVMLISFAVSYAGVFLKNAFPRFALLLE 257
           KI L L+FQA+L L IS+P T   PL    F A + ISFAVS+A +FL N+FPR A L E
Sbjct: 61  KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE 120

Query: 258 KLGTLFLAIGVCIISGGLLVPQSYAWICWLAASSS 281
           K+G LF A GVC I+  LLV Q++AWICW+A + S
Sbjct: 121 KVGALFSAFGVCFIASFLLVHQNFAWICWVACTFS 155

[Close]

BLAST of Cp4.1LG01g19050 vs. TrEMBL
Match: A0A0A0KQ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136900 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.0e-20
Identity = 70/130 (53.85%), Postives = 81/130 (62.31%), Query Frame = 1


Query: 12  MSSLTWGWGLSTPLEFQSINIKMHSPRPQPANSPQNLGKINLVLAFQAILPLSISA-PTR 71
           +SS TWG   S  L    I IKM   RP P NSPQ  G   L L FQAI+ L +S  P+ 
Sbjct: 30  ISSCTWGGAASDCLP---IYIKMQ--RPSPVNSPQ-FGNTFLSLTFQAIVGLFLSLNPSS 89

Query: 72  SSPLPTGLFVAVMLISFAVSYAGVFLKNAFPRFALLLEKLGTLFLAIGVCIISGGLLVPQ 131
           SSPLP+ LF AVML SF  SY GV L+  FP+ A LL+  G LF AIG CII G LL+  
Sbjct: 90  SSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLLQTFGALFAAIGTCII-GSLLLYP 149

Query: 132 SYAWICWLAA 141
           ++ WICWLAA
Sbjct: 150 NFTWICWLAA 152

[Close]

BLAST of Cp4.1LG01g19050 vs. TrEMBL
Match: A0A0A0KJN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136870 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-18
Identity = 66/147 (44.90%), Postives = 92/147 (62.59%), Query Frame = 1


Query: 1   MQPTQQETSLDMSSLTWGWGLSTPLEFQS-------INIKMHSPRP-QPANSPQNLGKIN 60
           M+ + Q+ S+DM+ L   + L T +  ++       I I M +  P   + +  N+G   
Sbjct: 1   MESSSQQISIDMNHL---YSLITSINERNPEINGLPICIIMQTASPANSSKTENNVGTTI 60

Query: 61  LVLAFQAILPLSISAPTRSSPLPTGLFVAVMLISFAVSYAGVFLKNAFPRFALLLEKLGT 120
           L L FQA+L L I++ T S PL T LF A +LISFAVS+ GVFL++ FPR ALL EK+G 
Sbjct: 61  LGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGA 120

Query: 121 LFLAIGVCIISGGLLVPQSYAWICWLA 140
           L  AIGVCI++  LL+ Q++AWI WLA
Sbjct: 121 LIAAIGVCILA-SLLIHQNFAWISWLA 143

[Close]

BLAST of Cp4.1LG01g19050 vs. TrEMBL
Match: A0A061EGV0_THECC (Ileal sodium/bile acid cotransporter, putative OS=Theobroma cacao GN=TCM_011398 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10
Identity = 41/122 (33.61%), Postives = 77/122 (63.11%), Query Frame = 1


Query: 161 PLEFQSINIKMHSPRPQPANSPQNLGKINLVLAFQAILPLSISAPTRSSP--LPTGLFVA 220
           PL   S+ I+M S +P+P   P +LGK  L L+FQ ++ L++S+    +   LP  +   
Sbjct: 81  PLSINSLEIEMQSYQPRP---PVSLGKTILSLSFQIVVALALSSSMGQTHHVLPIDIVKI 140

Query: 221 VMLISFAVSYAGVFLKNAFPRFALLLEKLGTLFLAIGVCIISGGLLVPQSYAWICWLAAS 280
            M+++FA S++G+FL++++P+ A ++E +G+L  A+G  I++  + +P +  W+ WLA +
Sbjct: 141 SMIMAFAASFSGIFLRSSYPKMANIIENIGSLIAAVGFFIMT-SIFLPGNLYWVTWLACA 198

[Close]

BLAST of Cp4.1LG01g19050 vs. NCBI nr
Match: gi|700194631|gb|KGN49808.1| (hypothetical protein Csa_5G137410 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 2.0e-22
Identity = 72/155 (46.45%), Postives = 94/155 (60.65%), Query Frame = 1


Query: 138 LAATQQETSLDMSSLT----------WGWGLS-TPLEFQSINIKMHSPRPQPANSPQNLG 197
           +A+T  +TSLDMS+ +          +G G   TP     + I+M       A+S Q LG
Sbjct: 1   MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG 60

Query: 198 KINLVLAFQAILPLSISAP-TRSSPLPTGLFVAVMLISFAVSYAGVFLKNAFPRFALLLE 257
           KI L L+FQA+L L IS+P T   PL    F A + ISFAVS+A +FL N+FPR A L E
Sbjct: 61  KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE 120

Query: 258 KLGTLFLAIGVCIISGGLLVPQSYAWICWLAASSS 281
           K+G LF A GVC I+  LLV Q++AWICW+A + S
Sbjct: 121 KVGALFSAFGVCFIASFLLVHQNFAWICWVACTFS 155

[Close]

BLAST of Cp4.1LG01g19050 vs. NCBI nr
Match: gi|700194629|gb|KGN49806.1| (hypothetical protein Csa_5G136900 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 7.2e-20
Identity = 70/130 (53.85%), Postives = 81/130 (62.31%), Query Frame = 1


Query: 12  MSSLTWGWGLSTPLEFQSINIKMHSPRPQPANSPQNLGKINLVLAFQAILPLSISA-PTR 71
           +SS TWG   S  L    I IKM   RP P NSPQ  G   L L FQAI+ L +S  P+ 
Sbjct: 30  ISSCTWGGAASDCLP---IYIKMQ--RPSPVNSPQ-FGNTFLSLTFQAIVGLFLSLNPSS 89

Query: 72  SSPLPTGLFVAVMLISFAVSYAGVFLKNAFPRFALLLEKLGTLFLAIGVCIISGGLLVPQ 131
           SSPLP+ LF AVML SF  SY GV L+  FP+ A LL+  G LF AIG CII G LL+  
Sbjct: 90  SSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLLQTFGALFAAIGTCII-GSLLLYP 149

Query: 132 SYAWICWLAA 141
           ++ WICWLAA
Sbjct: 150 NFTWICWLAA 152

[Close]

BLAST of Cp4.1LG01g19050 vs. NCBI nr
Match: gi|700194626|gb|KGN49803.1| (hypothetical protein Csa_5G136870 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18
Identity = 66/147 (44.90%), Postives = 92/147 (62.59%), Query Frame = 1


Query: 1   MQPTQQETSLDMSSLTWGWGLSTPLEFQS-------INIKMHSPRP-QPANSPQNLGKIN 60
           M+ + Q+ S+DM+ L   + L T +  ++       I I M +  P   + +  N+G   
Sbjct: 1   MESSSQQISIDMNHL---YSLITSINERNPEINGLPICIIMQTASPANSSKTENNVGTTI 60

Query: 61  LVLAFQAILPLSISAPTRSSPLPTGLFVAVMLISFAVSYAGVFLKNAFPRFALLLEKLGT 120
           L L FQA+L L I++ T S PL T LF A +LISFAVS+ GVFL++ FPR ALL EK+G 
Sbjct: 61  LGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGA 120

Query: 121 LFLAIGVCIISGGLLVPQSYAWICWLA 140
           L  AIGVCI++  LL+ Q++AWI WLA
Sbjct: 121 LIAAIGVCILA-SLLIHQNFAWISWLA 143

[Close]

BLAST of Cp4.1LG01g19050 vs. NCBI nr
Match: gi|590698393|ref|XP_007045702.1| (Ileal sodium/bile acid cotransporter, putative [Theobroma cacao])

HSP 1 Score: 75.1 bits (183), Expect = 2.3e-10
Identity = 41/122 (33.61%), Postives = 77/122 (63.11%), Query Frame = 1


Query: 161 PLEFQSINIKMHSPRPQPANSPQNLGKINLVLAFQAILPLSISAPTRSSP--LPTGLFVA 220
           PL   S+ I+M S +P+P   P +LGK  L L+FQ ++ L++S+    +   LP  +   
Sbjct: 81  PLSINSLEIEMQSYQPRP---PVSLGKTILSLSFQIVVALALSSSMGQTHHVLPIDIVKI 140

Query: 221 VMLISFAVSYAGVFLKNAFPRFALLLEKLGTLFLAIGVCIISGGLLVPQSYAWICWLAAS 280
            M+++FA S++G+FL++++P+ A ++E +G+L  A+G  I++  + +P +  W+ WLA +
Sbjct: 141 SMIMAFAASFSGIFLRSSYPKMANIIENIGSLIAAVGFFIMT-SIFLPGNLYWVTWLACA 198

[Close]

BLAST of Cp4.1LG01g19050 vs. NCBI nr
Match: gi|645277436|ref|XP_008243769.1| (PREDICTED: uncharacterized protein LOC103341994 [Prunus mume])

HSP 1 Score: 63.9 bits (154), Expect = 5.4e-07
Identity = 43/140 (30.71%), Postives = 75/140 (53.57%), Query Frame = 1


Query: 154 WGW-----GLSTPLEFQSINIKMHSPRPQPANSPQNLGKINLVLAFQAILPLSISA---- 213
           W W     G   P+      I++ S +   + +P +LGK  L L FQAI+ L++++    
Sbjct: 66  WSWSGHQAGDCLPIYLHGCQIEVQSYQ---SKAPLSLGKTVLGLTFQAIVGLTLASNPGQ 125

Query: 214 PTRSSP----LPTGLFVAVMLISFAVSYAGVFLKNAFPRFALLLEKLGTLFLAIGVCIIS 273
           P +       LP  +    M+I+FA  ++ +FL  A+PR A L+EK+G++  A+G  +++
Sbjct: 126 PDQDQDQPHLLPLHMVGVAMVIAFAACFSAIFLTRAYPRAASLIEKIGSVSAALGFFLMT 185

Query: 274 GGLLVPQSYAWICWLAASSS 281
             + +   + WICWLA + S
Sbjct: 186 -SIFLSNIFIWICWLACAFS 201

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g19050 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g19050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJP2_CUCSA	1.4e-22	46.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G137410 PE=4 SV=1	[more]
A0A0A0KQ03_CUCSA	5.0e-20	53.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136900 PE=4 SV=1	[more]
A0A0A0KJN8_CUCSA	1.6e-18	44.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G136870 PE=4 SV=1	[more]
A0A061EGV0_THECC	1.6e-10	33.61	Ileal sodium/bile acid cotransporter, putative OS=Theobroma cacao GN=TCM_011398 ...	[more]

BLAST of Cp4.1LG01g19050 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g19050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700194631\|gb\|KGN49808.1\|	2.0e-22	46.45	hypothetical protein Csa_5G137410 [Cucumis sativus]	[more]
gi\|700194629\|gb\|KGN49806.1\|	7.2e-20	53.85	hypothetical protein Csa_5G136900 [Cucumis sativus]	[more]
gi\|700194626\|gb\|KGN49803.1\|	2.3e-18	44.90	hypothetical protein Csa_5G136870 [Cucumis sativus]	[more]
gi\|590698393\|ref\|XP_007045702.1\|	2.3e-10	33.61	Ileal sodium/bile acid cotransporter, putative [Theobroma cacao]	[more]
gi\|645277436\|ref\|XP_008243769.1\|	5.4e-07	30.71	PREDICTED: uncharacterized protein LOC103341994 [Prunus mume]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g19050.1	Cp4.1LG01g19050.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g19050	Cucurbita pepo (Zucchini)	cpecpeB199
Cp4.1LG01g19050	Cucumber (Gy14) v1	cgycpeB0987
Cp4.1LG01g19050	Cucurbita maxima (Rimu)	cmacpeB318
Cp4.1LG01g19050	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g19050	Cucurbita moschata (Rifu)	cmocpeB280
Cp4.1LG01g19050	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g19050	Wild cucumber (PI 183967)	cpecpiB418
Cp4.1LG01g19050	Cucumber (Chinese Long) v2	cpecuB420
Cp4.1LG01g19050	Bottle gourd (USVL1VR-Ls)	cpelsiB311
Cp4.1LG01g19050	Watermelon (Charleston Gray)	cpewcgB370
Cp4.1LG01g19050	Watermelon (97103) v1	cpewmB440
Cp4.1LG01g19050	Melon (DHL92) v3.5.1	cpemeB359
Cp4.1LG01g19050	Cucumber (Gy14) v2	cgybcpeB630
Cp4.1LG01g19050	Melon (DHL92) v3.6.1	cpemedB419
Cp4.1LG01g19050	Silver-seed gourd	carcpeB0670
Cp4.1LG01g19050	Silver-seed gourd	carcpeB1158
Cp4.1LG01g19050	Cucumber (Chinese Long) v3	cpecucB0522
Cp4.1LG01g19050	Wax gourd	cpewgoB0491