Cp4.1LG01g18490 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g18490
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	BnaC04g42370D protein
Location	Cp4.1LG01 : 15775016 .. 15775840 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGAGAAGACTTAAAAACGAGATTTCTTTTCTTGATTTGGACCTTGGAGTTCACATTCCTCGAAGAAAGAGGGGTTCTTCCGGCTCTGCTATTACCAAACATTCAATCTCTATGATGGATGGCGCTACCATTCTGTTTGCATTCTCCAACTCTGTCACTCATATCCTTCCCTCTTCCTATCTTCCACTTCGAACCACTAACACAAAACCCATCACCAACACAAAACCCATCACTAAAAGAAAACCCATCACTGAAAGAAAACCCATCACTGAAAGAAAATCCATCACTGAAAGAAAAGCCGTCACTGAAAGAAAATCCAGGAAGAAGAGGTGTAAGCAAACCCCCTTTCCGACCACTCCGGACATGCCGGCGGCGATGAGGGATCGAATTGGGGAGATGGGGGCGTACCAAATCGAACTGGCAATTCAAAAACAACTGCAAGATACTGATATGAATAAGAATCATGGGCGACTATCTTTCCCTGCAAAGAAACTGAAAGTGGATTTTGCAACGGAAGAGGAGAGGAGGGTACTAAAGCAACAAGAAAACAAGGGGAAAAAAGGGATGAATGTAATGATAGTGGATCCTCTTCTCCGAGAGAGCAGCATTTGCTTGAAGTTGTGGAAGATTGGGAGCGGGGATTCCTACTGTTTAATGACACAATGGAATTCGTTAGTGGAACAGAATGGGTTCAAAAGCGGAGATCACGTCCAGCTTTGGAGCTTCAGAAAAGATGAATTCGAGGCTGAAACTCAAACCATGGTTTCTCGTCTCTGTTTCGCCATGGTTAAGCTTGATGCCACCACTGCTTCTGCTTGA

mRNA sequence

ATGGGTTTGAGAAGACTTAAAAACGAGATTTCTTTTCTTGATTTGGACCTTGGAGTTCACATTCCTCGAAGAAAGAGGGGTTCTTCCGGCTCTGCTATTACCAAACATTCAATCTCTATGATGGATGGCGCTACCATTCTGTTTGCATTCTCCAACTCTGTCACTCATATCCTTCCCTCTTCCTATCTTCCACTTCGAACCACTAACACAAAACCCATCACCAACACAAAACCCATCACTAAAAGAAAACCCATCACTGAAAGAAAACCCATCACTGAAAGAAAATCCATCACTGAAAGAAAAGCCGTCACTGAAAGAAAATCCAGGAAGAAGAGGTGTAAGCAAACCCCCTTTCCGACCACTCCGGACATGCCGGCGGCGATGAGGGATCGAATTGGGGAGATGGGGGCGTACCAAATCGAACTGGCAATTCAAAAACAACTGCAAGATACTGATATGAATAAGAATCATGGGCGACTATCTTTCCCTGCAAAGAAACTGAAAGTGGATTTTGCAACGGAAGAGGAGAGGAGGGTACTAAAGCAACAAGAAAACAAGGGGAAAAAAGGGATGAATGTAATGATAGTGGATCCTCTTCTCCGAGAGAGCAGCATTTGCTTGAAGTTGTGGAAGATTGGGAGCGGGGATTCCTACTGTTTAATGACACAATGGAATTCGTTAGTGGAACAGAATGGGTTCAAAAGCGGAGATCACGTCCAGCTTTGGAGCTTCAGAAAAGATGAATTCGAGGCTGAAACTCAAACCATGGTTTCTCGTCTCTGTTTCGCCATGGTTAAGCTTGATGCCACCACTGCTTCTGCTTGA

Coding sequence (CDS)

ATGGGTTTGAGAAGACTTAAAAACGAGATTTCTTTTCTTGATTTGGACCTTGGAGTTCACATTCCTCGAAGAAAGAGGGGTTCTTCCGGCTCTGCTATTACCAAACATTCAATCTCTATGATGGATGGCGCTACCATTCTGTTTGCATTCTCCAACTCTGTCACTCATATCCTTCCCTCTTCCTATCTTCCACTTCGAACCACTAACACAAAACCCATCACCAACACAAAACCCATCACTAAAAGAAAACCCATCACTGAAAGAAAACCCATCACTGAAAGAAAATCCATCACTGAAAGAAAAGCCGTCACTGAAAGAAAATCCAGGAAGAAGAGGTGTAAGCAAACCCCCTTTCCGACCACTCCGGACATGCCGGCGGCGATGAGGGATCGAATTGGGGAGATGGGGGCGTACCAAATCGAACTGGCAATTCAAAAACAACTGCAAGATACTGATATGAATAAGAATCATGGGCGACTATCTTTCCCTGCAAAGAAACTGAAAGTGGATTTTGCAACGGAAGAGGAGAGGAGGGTACTAAAGCAACAAGAAAACAAGGGGAAAAAAGGGATGAATGTAATGATAGTGGATCCTCTTCTCCGAGAGAGCAGCATTTGCTTGAAGTTGTGGAAGATTGGGAGCGGGGATTCCTACTGTTTAATGACACAATGGAATTCGTTAGTGGAACAGAATGGGTTCAAAAGCGGAGATCACGTCCAGCTTTGGAGCTTCAGAAAAGATGAATTCGAGGCTGAAACTCAAACCATGGTTTCTCGTCTCTGTTTCGCCATGGTTAAGCTTGATGCCACCACTGCTTCTGCTTGA

Protein sequence

MGLRRLKNEISFLDLDLGVHIPRRKRGSSGSAITKHSISMMDGATILFAFSNSVTHILPSSYLPLRTTNTKPITNTKPITKRKPITERKPITERKSITERKAVTERKSRKKRCKQTPFPTTPDMPAAMRDRIGEMGAYQIELAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENKGKKGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKLDATTASA

Homology

[Close]

BLAST of Cp4.1LG01g18490 vs. Swiss-Prot
Match: Y3485_ARATH (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.2e-14
Identity = 65/185 (35.14%), Postives = 94/185 (50.81%), Query Frame = 1


Query: 99  ERKAVTERKSRK--KRCKQTPFP-TTPDMPAAMRDRIGEMG-AYQIELAIQKQLQDTDMN 158
           +R+AV ERK     K+ K  PFP T  D P  +   + +M  A   +L  +K L  TD+N
Sbjct: 181 KRRAVEERKRTGGFKKAKVAPFPGTARDTPKWLVKVMRDMKEAKDAKLIFEKTLFVTDIN 240

Query: 159 KNHGRLSFPAKKL-KVDFATEEERRVLKQQENKGKK-GMNVMIVDPLLRESSICLKLWKI 218
               RLS P   L + DF T  E R++K+  N  KK G+  ++VD    +  + LK W++
Sbjct: 241 PTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRSVKWGVMLKRWEL 300

Query: 219 ----GSGD-SYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKL 273
               G G  +Y L+  WN +VE NG K GD++ +WSFR              LCFAM + 
Sbjct: 301 KKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFR----------CRGVLCFAMEQS 355

[Close]

BLAST of Cp4.1LG01g18490 vs. Swiss-Prot
Match: Y1592_ARATH (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.5e-11
Identity = 57/187 (30.48%), Postives = 90/187 (48.13%), Query Frame = 1


Query: 89  KPITERKSITERKAVTERKSRKKRCKQTPFPTT-PDMPAAMRDRIGEM-GAYQIELAIQK 148
           K + E K +   + ++    RKK       P   P  P  +   +  M GA   +L I+K
Sbjct: 127 KSVPEEKDVILDRILSNVPRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEK 186

Query: 149 QLQDTDMNKNHGRLSFPAKK-LKVDFATEEERRVLKQQE--NKGKKGMNVMIVDPLLRES 208
            L   D++    RLS P    ++ DF T +E R++ + E  N+G  G+   +VD   ++ 
Sbjct: 187 NLDSNDVDPRQNRLSIPINTVIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKW 246

Query: 209 SICLKLWKI--GSGDSY---CLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVS 266
           ++  K W +   SG SY    L  +W+++VE NG K GD + LWSFR ++          
Sbjct: 247 NMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSNDI--------- 303

[Close]

BLAST of Cp4.1LG01g18490 vs. Swiss-Prot
Match: Y2142_ARATH (B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana GN=At2g31420 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.3e-11
Identity = 46/130 (35.38%), Postives = 69/130 (53.08%), Query Frame = 1


Query: 138 YQIELAIQKQ-LQDTDMNKNHGRLSFPAKKL-KVDFATEEERRVLKQQENKGKK-GMNVM 197
           Y  +L I+++ L  TD+ KN G LS    KL K DF TE+E R L +   K K+ G+ V 
Sbjct: 74  YDPKLIIKRRVLCTTDLRKNQGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAKRDGLKVF 133

Query: 198 IVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQ 257
           +VDP   +  + LK W   +   Y L   WN+++++  FK  D +++WSFR         
Sbjct: 134 LVDPESDKHVVYLKKWNGNTVWKYVLSHGWNNVIDKKIFKVNDVIEIWSFRDGS------ 193

Query: 258 TMVSRLCFAM 265
               +LCFA+
Sbjct: 194 ---GKLCFAL 194

[Close]

BLAST of Cp4.1LG01g18490 vs. Swiss-Prot
Match: Y1593_ARATH (B3 domain-containing protein At1g05930 OS=Arabidopsis thaliana GN=At1g05930 PE=2 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 9.6e-11
Identity = 49/148 (33.11%), Postives = 73/148 (49.32%), Query Frame = 1


Query: 120 TTPDMPAAMRDRIGEMGAYQIELAIQKQLQDTDM-NKNHGRLSFPAKKL-KVDFATEEER 179
           T  +M   +R  + +M A  + L ++K L  TD+    HGR S    +L   DF   EER
Sbjct: 156 TAREMRWWLRQVMKDMRAEDLTLILEKTLSTTDVITTTHGRFSMHFNRLISNDFLKPEER 215

Query: 180 RVLKQQE-NKGKKGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSG 239
            +L++   N    G+  ++VD   ++ S+ LK W    G +Y L   WN +V+ N  K+G
Sbjct: 216 SILEEDTYNDETMGVGAILVDQRSQKWSVILKRW----GQNYFLSCGWNDVVKANKLKAG 275

Query: 240 DHVQLWSFRKDEFEAETQTMVSRLCFAM 265
           D + LW+FR D            LCFAM
Sbjct: 276 DDICLWAFRCD----------GVLCFAM 289

[Close]

BLAST of Cp4.1LG01g18490 vs. Swiss-Prot
Match: Y5578_ARATH (Putative B3 domain-containing protein At5g35780 OS=Arabidopsis thaliana GN=At5g35780 PE=3 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 6.4e-07
Identity = 52/169 (30.77%), Postives = 87/169 (51.48%), Query Frame = 1


Query: 91  ITERKSITERKAVTERKSRK-KRCKQTPFPT----TPDMPAAMRDRIGEMGAYQIELAIQ 150
           +TE KS  +R+AV +RKS K K+ +    P     TP+    +  R     A    L  +
Sbjct: 130 LTENKS-RKRRAVQQRKSGKLKKARVVSLPRMSIETPEWVFQVM-RYMNADAETPRLIFE 189

Query: 151 KQLQDTDMNKNHGRLSFPAKKL-KVDFATEEE-RRVLKQQENKGKK--GMNVMIVDPLLR 210
           + L ++D+     RL  P ++L + DF T  E R + K ++N+  K  G+  ++V+   +
Sbjct: 190 RTLFNSDVKSGLSRLLIPFQQLIRNDFLTPAECRAIQKDEDNEDDKNIGVGTILVNQRSK 249

Query: 211 ESSICLKLWKI----GSGD-SYCLMTQWNSLVEQNGFKSGDHVQLWSFR 246
              +  K+W +    G G  +Y L   WN +V+ NG K+GD++ LW+FR
Sbjct: 250 MWGLRFKIWAMEKDSGHGTLNYILNWGWNDVVKGNGLKAGDNISLWTFR 296

[Close]

BLAST of Cp4.1LG01g18490 vs. TrEMBL
Match: A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.0e-48
Identity = 120/257 (46.69%), Postives = 153/257 (59.53%), Query Frame = 1


Query: 19  VHIPRRKRGSSGSAITKHS--------ISMMDGATILFAFSNSVTHILPSSYLPLRTTNT 78
           V++PR++RGSS     K          +SM + A+IL   +NSV  + P      R    
Sbjct: 23  VYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILIQLANSVPDVPPQKINKTRKRKN 82

Query: 79  KPITNTKPITKRKPITERKPITERKSITERKAVTERKSRKKRCKQTPFPTTPDMPAAMRD 138
            P T T+  T R     +K +      T R     +K RK    Q+     P MP AMRD
Sbjct: 83  PP-TQTEASTSRTKQQRKKNVAS----TSRT----KKQRKMNVDQSE---RPSMPVAMRD 142

Query: 139 RIGEMGAYQIELAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENKGKKG 198
           RI EMG Y+I L IQKQL DTD+NKNHGRLS   K+L  DFATEEE ++L +QENK K G
Sbjct: 143 RILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMG 202

Query: 199 MNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFE 258
           +NVMI+D +L E  +CLK WKIGSG  YCLMT+WN +VE+ G KSG+ +Q+WSFRKD+  
Sbjct: 203 INVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDD-- 262

Query: 259 AETQTMVSRLCFAMVKL 268
              +    RLC A+VKL
Sbjct: 263 ---EDEAHRLCLALVKL 262

[Close]

BLAST of Cp4.1LG01g18490 vs. TrEMBL
Match: A0A0A0KSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.5e-47
Identity = 119/257 (46.30%), Postives = 156/257 (60.70%), Query Frame = 1


Query: 19  VHIPRRKRGSSGSA--------ITKHSISMMDGATILFAFSNSVTHILPSSYLPLRTTNT 78
           ++IPR++RGSS  A         T+  +SM++ A+IL   +NSV   +P     ++    
Sbjct: 23  IYIPRKRRGSSSGAGKEQQYITETELPLSMVEAASILIELANSVP--VPD----VQRQKF 82

Query: 79  KPITNTKPITKRKPITERKPITERKSITERKAVTERKSRKKRCKQTPFPTTPDMPAAMRD 138
               N+ P  +R+ + +          TE      +K RKK   +   P    MP  MRD
Sbjct: 83  NKTANSVPDVERQKLNKTHKRKNPPIPTEASTSKTKKQRKKNVNKREHPP---MPVTMRD 142

Query: 139 RIGEMGAYQIELAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENKGKKG 198
           RI EMG Y+I L IQK+L DTD+NKNHGR S   K L  DFATEEE ++L +QENK KKG
Sbjct: 143 RILEMGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFATEEESKLLSEQENKNKKG 202

Query: 199 MNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRK-DEF 258
           +NVMI+D  L E  +CLK WKIGSG+ YCLMTQWN +VE+ GFKSG+ +Q+WSFRK DE+
Sbjct: 203 INVMILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGFKSGEEIQVWSFRKDDEY 262

Query: 259 EAETQTMVSRLCFAMVK 267
           EA       RLCFA+ K
Sbjct: 263 EAH------RLCFALEK 264

[Close]

BLAST of Cp4.1LG01g18490 vs. TrEMBL
Match: A0A0A0KUX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.9e-46
Identity = 116/256 (45.31%), Postives = 150/256 (58.59%), Query Frame = 1


Query: 19  VHIPRRKRGSSGSAITKHS--------ISMMDGATILFAFSNSVTHILPSSYLPLRTTNT 78
           V++PR++RGSS     K          +SM + A+IL   +NSV  +             
Sbjct: 21  VYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILIQLANSVPDV------------- 80

Query: 79  KPITNTKPITKRKPITERKPITERKSITERKAVTERKSRKKRCKQTPFPTTPDMPAAMRD 138
            P+       KRK      P T+ ++ T R     +K RK    Q+     P MP AMRD
Sbjct: 81  -PLQKINKTRKRK-----NPPTQTEASTSRT----KKQRKMNVDQSE---RPSMPVAMRD 140

Query: 139 RIGEMGAYQIELAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENKGKKG 198
           RI EMG Y+I L IQKQL DTD+NKNHGRLS   K+L  DFATEEE ++L +QENK K G
Sbjct: 141 RILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMG 200

Query: 199 MNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFE 258
           +NVM +D +L E  +CLK WKIGSG  YCLMT+WN +VE+ G KSG+ +Q+WSFRKD+  
Sbjct: 201 INVMTLDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDD-- 245

Query: 259 AETQTMVSRLCFAMVK 267
              +    RLCFA+ K
Sbjct: 261 ---EDEAHRLCFALEK 245

[Close]

BLAST of Cp4.1LG01g18490 vs. TrEMBL
Match: A0A0A0LRL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.5e-44
Identity = 114/275 (41.45%), Postives = 160/275 (58.18%), Query Frame = 1


Query: 1   MGLRRLKNEISFLDLDLGVHIPRRKRGSSGSAITKH-----SISMMDGATILFAFSNSVT 60
           MG   ++   S + +D GVH+PRRKR  SGS  +K      SISM++ A IL A +N   
Sbjct: 3   MGNVMIQEPHSLVLIDGGVHVPRRKR--SGSVESKKEDDGASISMVEAAKILIAMAND-- 62

Query: 61  HILPSSYLPLRTTNTKPITNTKPITKRKPITERKPITERKSITERKAVTERKSRKKRCKQ 120
                                    KRK          +KS T +K  T   +++K+   
Sbjct: 63  ----------------------GFCKRKKKESPTVKQSKKSPTAKKRKTSPTAKQKKKSM 122

Query: 121 TPFPTTPDMPAAMRDRIGEMGAYQIELAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEE 180
               + P+MPA+MRDR+   G Y+I+L IQKQL+++D+++NHGRL  PAKK+K +F  EE
Sbjct: 123 ELEESFPEMPASMRDRVVGKGGYEIQLVIQKQLEESDVSRNHGRLCLPAKKVKTEFVREE 182

Query: 181 ERRVLKQQ---ENKGKKGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNG 240
           ER +L+++   + K KKG+ V ++D  LRESS+CLK WKIGSG  YCLM  WN  VE+NG
Sbjct: 183 ERNILEEENDGKKKNKKGLEVGVMDDSLRESSMCLKKWKIGSGKFYCLMKNWNCFVEENG 242

Query: 241 FKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKL 268
            +SGD++QLWSFR +        +  +LCFA+VKL
Sbjct: 243 LRSGDYIQLWSFRNN--------ISDKLCFAIVKL 243

[Close]

BLAST of Cp4.1LG01g18490 vs. TrEMBL
Match: A0A0A0KPD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.7e-38
Identity = 79/134 (58.96%), Postives = 100/134 (74.63%), Query Frame = 1


Query: 134 EMGAYQIELAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENKGKKGMNV 193
           EM  Y+I L IQKQL DTD+NKNHGRLS   K+L  DFATEEE ++L +QENK K G+NV
Sbjct: 4   EMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGINV 63

Query: 194 MIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAET 253
           M++D +L E  +CLK WKIGSG+ YCLMT+WN +VE+ G KSG+ +Q+WSFRKD+     
Sbjct: 64  MLLDDVLEERMLCLKKWKIGSGEVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDD----- 123

Query: 254 QTMVSRLCFAMVKL 268
           +    RLC A+VKL
Sbjct: 124 EDEAHRLCLALVKL 132

[Close]

BLAST of Cp4.1LG01g18490 vs. TAIR10
Match: AT3G24850.1 (AT3G24850.1 Domain of unknown function (DUF313) )

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-15
Identity = 65/185 (35.14%), Postives = 94/185 (50.81%), Query Frame = 1


Query: 99  ERKAVTERKSRK--KRCKQTPFP-TTPDMPAAMRDRIGEMG-AYQIELAIQKQLQDTDMN 158
           +R+AV ERK     K+ K  PFP T  D P  +   + +M  A   +L  +K L  TD+N
Sbjct: 181 KRRAVEERKRTGGFKKAKVAPFPGTARDTPKWLVKVMRDMKEAKDAKLIFEKTLFVTDIN 240

Query: 159 KNHGRLSFPAKKL-KVDFATEEERRVLKQQENKGKK-GMNVMIVDPLLRESSICLKLWKI 218
               RLS P   L + DF T  E R++K+  N  KK G+  ++VD    +  + LK W++
Sbjct: 241 PTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRSVKWGVMLKRWEL 300

Query: 219 ----GSGD-SYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVSRLCFAMVKL 273
               G G  +Y L+  WN +VE NG K GD++ +WSFR              LCFAM + 
Sbjct: 301 KKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFR----------CRGVLCFAMEQS 355

[Close]

BLAST of Cp4.1LG01g18490 vs. TAIR10
Match: AT1G05920.1 (AT1G05920.1 Domain of unknown function (DUF313) )

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 57/187 (30.48%), Postives = 90/187 (48.13%), Query Frame = 1


Query: 89  KPITERKSITERKAVTERKSRKKRCKQTPFPTT-PDMPAAMRDRIGEM-GAYQIELAIQK 148
           K + E K +   + ++    RKK       P   P  P  +   +  M GA   +L I+K
Sbjct: 127 KSVPEEKDVILDRILSNVPRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEK 186

Query: 149 QLQDTDMNKNHGRLSFPAKK-LKVDFATEEERRVLKQQE--NKGKKGMNVMIVDPLLRES 208
            L   D++    RLS P    ++ DF T +E R++ + E  N+G  G+   +VD   ++ 
Sbjct: 187 NLDSNDVDPRQNRLSIPINTVIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKW 246

Query: 209 SICLKLWKI--GSGDSY---CLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQTMVS 266
           ++  K W +   SG SY    L  +W+++VE NG K GD + LWSFR ++          
Sbjct: 247 NMGFKQWFMTTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSNDI--------- 303

[Close]

BLAST of Cp4.1LG01g18490 vs. TAIR10
Match: AT2G31420.1 (AT2G31420.1 Domain of unknown function (DUF313) )

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12
Identity = 46/130 (35.38%), Postives = 69/130 (53.08%), Query Frame = 1


Query: 138 YQIELAIQKQ-LQDTDMNKNHGRLSFPAKKL-KVDFATEEERRVLKQQENKGKK-GMNVM 197
           Y  +L I+++ L  TD+ KN G LS    KL K DF TE+E R L +   K K+ G+ V 
Sbjct: 74  YDPKLIIKRRVLCTTDLRKNQGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAKRDGLKVF 133

Query: 198 IVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFEAETQ 257
           +VDP   +  + LK W   +   Y L   WN+++++  FK  D +++WSFR         
Sbjct: 134 LVDPESDKHVVYLKKWNGNTVWKYVLSHGWNNVIDKKIFKVNDVIEIWSFRDGS------ 193

Query: 258 TMVSRLCFAM 265
               +LCFA+
Sbjct: 194 ---GKLCFAL 194

[Close]

BLAST of Cp4.1LG01g18490 vs. TAIR10
Match: AT1G05930.1 (AT1G05930.1 Domain of unknown function (DUF313) )

HSP 1 Score: 68.9 bits (167), Expect = 5.4e-12
Identity = 49/148 (33.11%), Postives = 73/148 (49.32%), Query Frame = 1


Query: 120 TTPDMPAAMRDRIGEMGAYQIELAIQKQLQDTDM-NKNHGRLSFPAKKL-KVDFATEEER 179
           T  +M   +R  + +M A  + L ++K L  TD+    HGR S    +L   DF   EER
Sbjct: 156 TAREMRWWLRQVMKDMRAEDLTLILEKTLSTTDVITTTHGRFSMHFNRLISNDFLKPEER 215

Query: 180 RVLKQQE-NKGKKGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSG 239
            +L++   N    G+  ++VD   ++ S+ LK W    G +Y L   WN +V+ N  K+G
Sbjct: 216 SILEEDTYNDETMGVGAILVDQRSQKWSVILKRW----GQNYFLSCGWNDVVKANKLKAG 275

Query: 240 DHVQLWSFRKDEFEAETQTMVSRLCFAM 265
           D + LW+FR D            LCFAM
Sbjct: 276 DDICLWAFRCD----------GVLCFAM 289

[Close]

BLAST of Cp4.1LG01g18490 vs. TAIR10
Match: AT5G38500.1 (AT5G38500.1 Domain of unknown function (DUF313) )

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-08
Identity = 61/232 (26.29%), Postives = 105/232 (45.26%), Query Frame = 1


Query: 60  SSYLPLRTTNTKPITNTKPITKRKPITERKP------------ITERKSITERKAVTERK 119
           SS+L LR        +   +   K  T+  P            +TE  +  +R+AV +RK
Sbjct: 168 SSFLNLRCYEASLFLDYNTVESEKTETKVLPNPNYQSSSPSSCLTENDTSRKRRAVEQRK 227

Query: 120 SRK-KRCKQTPFPT-TPDMPAAMRDRIGEMGA--YQIELAIQKQLQDTDMNKNHGRLSFP 179
           S K K+ K +P P  + + P  +   +G M A     +L  ++ L  +D+N N  RL  P
Sbjct: 228 SGKVKKVKVSPLPRLSTETPEWVFQAMGHMNADAETPKLIFERTLFKSDVNSNLSRLLIP 287

Query: 180 AKKL-KVDFATEEERRVLKQQENKGKKGMNV------------------------MIVDP 239
            +KL + DF T EE R +++ ++K  + ++V                        ++V+ 
Sbjct: 288 FQKLIRNDFLTPEECRAMQEDKDKDDEDISVGTILVCQAKQEDEDKDDEDIGAGTILVNQ 347

Query: 240 LLRESSICLKLWKI----GSGD-SYCLMTQWNSLVEQNGFKSGDHVQLWSFR 246
             +   +  K+W +    G G  +Y L   WN +V+ N  K+GD++ LW+FR
Sbjct: 348 RFKMWGLRFKIWGMEKDSGHGTLNYILNWDWNDVVKGNSLKAGDNIGLWTFR 399

[Close]

BLAST of Cp4.1LG01g18490 vs. NCBI nr
Match: gi|659072764|ref|XP_008467039.1| (PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo])

HSP 1 Score: 204.9 bits (520), Expect = 1.8e-49
Identity = 119/259 (45.95%), Postives = 153/259 (59.07%), Query Frame = 1


Query: 20  HIPRRKRG------SSGSAITKHSISMMDGATILFAFSNSVTHILPSSYLPLRTTNTKPI 79
           ++P+R+R          +  T   ISM + A +L   +NSV ++ P            P 
Sbjct: 21  YVPQRRRSFRVEIKEQSNPQTHLPISMSEAADVLIEMANSVPNVEPQQINKTHKRKNPPR 80

Query: 80  TNTKPITKRKPITERKPITERKSITERKAVTERKSRKKRCKQTPFPTTPDMPAAMRDRIG 139
           TNT                            +++ RKK+ +Q+ +P+ P+MP  MRDRI 
Sbjct: 81  TNT--------------------------AIKKQRRKKKVEQSEYPSIPEMPTTMRDRIE 140

Query: 140 EMGAYQIELAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENKGKKGMNV 199
           EMG Y+I L IQKQL DTD+NKN GRLS P KKL  DF TEEER +L QQENK KKG+NV
Sbjct: 141 EMGGYEINLVIQKQLTDTDLNKNEGRLSMPKKKLAFDFTTEEERNLLSQQENKNKKGINV 200

Query: 200 MIVDPLLRE-SSICLKLWKIGS--GDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKD-EF 259
           MI++ ++ +  SICLK WKIGS  GD YCLMTQWN+ VE+ G KSG H+QLW FRKD EF
Sbjct: 201 MIMNNMVEDIRSICLKKWKIGSGNGDVYCLMTQWNAFVEETGLKSGQHIQLWCFRKDYEF 247

Query: 260 EAETQTMVSRLCFAMVKLD 269
           E        RLCFA+V+L+
Sbjct: 261 EP------PRLCFAVVRLN 247

[Close]

BLAST of Cp4.1LG01g18490 vs. NCBI nr
Match: gi|778703844|ref|XP_011655441.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 5.7e-48
Identity = 120/257 (46.69%), Postives = 153/257 (59.53%), Query Frame = 1


Query: 19  VHIPRRKRGSSGSAITKHS--------ISMMDGATILFAFSNSVTHILPSSYLPLRTTNT 78
           V++PR++RGSS     K          +SM + A+IL   +NSV  + P      R    
Sbjct: 23  VYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILIQLANSVPDVPPQKINKTRKRKN 82

Query: 79  KPITNTKPITKRKPITERKPITERKSITERKAVTERKSRKKRCKQTPFPTTPDMPAAMRD 138
            P T T+  T R     +K +      T R     +K RK    Q+     P MP AMRD
Sbjct: 83  PP-TQTEASTSRTKQQRKKNVAS----TSRT----KKQRKMNVDQSE---RPSMPVAMRD 142

Query: 139 RIGEMGAYQIELAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENKGKKG 198
           RI EMG Y+I L IQKQL DTD+NKNHGRLS   K+L  DFATEEE ++L +QENK K G
Sbjct: 143 RILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMG 202

Query: 199 MNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFE 258
           +NVMI+D +L E  +CLK WKIGSG  YCLMT+WN +VE+ G KSG+ +Q+WSFRKD+  
Sbjct: 203 INVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDD-- 262

Query: 259 AETQTMVSRLCFAMVKL 268
              +    RLC A+VKL
Sbjct: 263 ---EDEAHRLCLALVKL 262

[Close]

BLAST of Cp4.1LG01g18490 vs. NCBI nr
Match: gi|700196320|gb|KGN51497.1| (hypothetical protein Csa_5G570420 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 2.2e-47
Identity = 119/257 (46.30%), Postives = 156/257 (60.70%), Query Frame = 1


Query: 19  VHIPRRKRGSSGSA--------ITKHSISMMDGATILFAFSNSVTHILPSSYLPLRTTNT 78
           ++IPR++RGSS  A         T+  +SM++ A+IL   +NSV   +P     ++    
Sbjct: 23  IYIPRKRRGSSSGAGKEQQYITETELPLSMVEAASILIELANSVP--VPD----VQRQKF 82

Query: 79  KPITNTKPITKRKPITERKPITERKSITERKAVTERKSRKKRCKQTPFPTTPDMPAAMRD 138
               N+ P  +R+ + +          TE      +K RKK   +   P    MP  MRD
Sbjct: 83  NKTANSVPDVERQKLNKTHKRKNPPIPTEASTSKTKKQRKKNVNKREHPP---MPVTMRD 142

Query: 139 RIGEMGAYQIELAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENKGKKG 198
           RI EMG Y+I L IQK+L DTD+NKNHGR S   K L  DFATEEE ++L +QENK KKG
Sbjct: 143 RILEMGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFATEEESKLLSEQENKNKKG 202

Query: 199 MNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRK-DEF 258
           +NVMI+D  L E  +CLK WKIGSG+ YCLMTQWN +VE+ GFKSG+ +Q+WSFRK DE+
Sbjct: 203 INVMILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGFKSGEEIQVWSFRKDDEY 262

Query: 259 EAETQTMVSRLCFAMVK 267
           EA       RLCFA+ K
Sbjct: 263 EAH------RLCFALEK 264

[Close]

BLAST of Cp4.1LG01g18490 vs. NCBI nr
Match: gi|659072862|ref|XP_008467133.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo])

HSP 1 Score: 196.1 bits (497), Expect = 8.3e-47
Identity = 99/163 (60.74%), Postives = 122/163 (74.85%), Query Frame = 1


Query: 106 RKSRKKRCKQTPFPTTPDMPAAMRDRIGEMGAYQIELAIQKQLQDTDMNKNHGRLSFPAK 165
           +K RKK  KQ   P+   MP AMRDRI EMG Y+I L IQKQL DTD+NKNHGRLS   K
Sbjct: 31  KKQRKKYVKQIEHPS---MPVAMRDRILEMGGYEIRLVIQKQLTDTDLNKNHGRLSMNTK 90

Query: 166 KLKVDFATEEERRVLKQQENKGKKGMNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWN 225
           +L  DFATEEE ++L +QENK K+G+NVM++D +L E  +CLK WKIGSG+ YCLMT+WN
Sbjct: 91  QLSFDFATEEETKLLSEQENKNKRGINVMMLDDVLEERMLCLKKWKIGSGEVYCLMTRWN 150

Query: 226 SLVEQNGFKSGDHVQLWSFRK-DEFEAETQTMVSRLCFAMVKL 268
            +VE+ GFK G+ +Q+WSFRK DE+EA       RLCFA+VKL
Sbjct: 151 LMVEERGFKGGEEIQVWSFRKDDEYEAH------RLCFALVKL 184

[Close]

BLAST of Cp4.1LG01g18490 vs. NCBI nr
Match: gi|700196319|gb|KGN51496.1| (hypothetical protein Csa_5G570410 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 4.1e-46
Identity = 116/256 (45.31%), Postives = 150/256 (58.59%), Query Frame = 1


Query: 19  VHIPRRKRGSSGSAITKHS--------ISMMDGATILFAFSNSVTHILPSSYLPLRTTNT 78
           V++PR++RGSS     K          +SM + A+IL   +NSV  +             
Sbjct: 21  VYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILIQLANSVPDV------------- 80

Query: 79  KPITNTKPITKRKPITERKPITERKSITERKAVTERKSRKKRCKQTPFPTTPDMPAAMRD 138
            P+       KRK      P T+ ++ T R     +K RK    Q+     P MP AMRD
Sbjct: 81  -PLQKINKTRKRK-----NPPTQTEASTSRT----KKQRKMNVDQSE---RPSMPVAMRD 140

Query: 139 RIGEMGAYQIELAIQKQLQDTDMNKNHGRLSFPAKKLKVDFATEEERRVLKQQENKGKKG 198
           RI EMG Y+I L IQKQL DTD+NKNHGRLS   K+L  DFATEEE ++L +QENK K G
Sbjct: 141 RILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMG 200

Query: 199 MNVMIVDPLLRESSICLKLWKIGSGDSYCLMTQWNSLVEQNGFKSGDHVQLWSFRKDEFE 258
           +NVM +D +L E  +CLK WKIGSG  YCLMT+WN +VE+ G KSG+ +Q+WSFRKD+  
Sbjct: 201 INVMTLDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDD-- 245

Query: 259 AETQTMVSRLCFAMVK 267
              +    RLCFA+ K
Sbjct: 261 ---EDEAHRLCFALEK 245

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g18490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3485_ARATH	3.2e-14	35.14	Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana GN=At3g2...	[more]
Y1592_ARATH	2.5e-11	30.48	B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2...	[more]
Y2142_ARATH	3.3e-11	35.38	B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana GN=At2g31420 PE=3...	[more]
Y1593_ARATH	9.6e-11	33.11	B3 domain-containing protein At1g05930 OS=Arabidopsis thaliana GN=At1g05930 PE=2...	[more]
Y5578_ARATH	6.4e-07	30.77	Putative B3 domain-containing protein At5g35780 OS=Arabidopsis thaliana GN=At5g3...	[more]

BLAST of Cp4.1LG01g18490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP87_CUCSA	4.0e-48	46.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1	[more]
A0A0A0KSY8_CUCSA	1.5e-47	46.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1	[more]
A0A0A0KUX9_CUCSA	2.9e-46	45.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1	[more]
A0A0A0LRL4_CUCSA	3.5e-44	41.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1	[more]
A0A0A0KPD7_CUCSA	1.7e-38	58.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g18490 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24850.1	1.8e-15	35.14	Domain of unknown function (DUF313)	[more]
AT1G05920.1	1.4e-12	30.48	Domain of unknown function (DUF313)	[more]
AT2G31420.1	1.9e-12	35.38	Domain of unknown function (DUF313)	[more]
AT1G05930.1	5.4e-12	33.11	Domain of unknown function (DUF313)	[more]
AT5G38500.1	3.6e-08	26.29	Domain of unknown function (DUF313)	[more]

BLAST of Cp4.1LG01g18490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072764\|ref\|XP_008467039.1\|	1.8e-49	45.95	PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo]	[more]
gi\|778703844\|ref\|XP_011655441.1\|	5.7e-48	46.69	PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus]	[more]
gi\|700196320\|gb\|KGN51497.1\|	2.2e-47	46.30	hypothetical protein Csa_5G570420 [Cucumis sativus]	[more]
gi\|659072862\|ref\|XP_008467133.1\|	8.3e-47	60.74	PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo]	[more]
gi\|700196319\|gb\|KGN51496.1\|	4.1e-46	45.31	hypothetical protein Csa_5G570410 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015300	DNA-bd_pseudobarrel_sf
IPR005508	DUF313

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g18490.1	Cp4.1LG01g18490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005508	B3 domain-containing protein	PFAM	PF03754	DUF313	coord: 124..229 score: 1.2
IPR015300	DNA-binding pseudobarrel domain	GENE3D	G3DSA:2.40.330.10		coord: 141..250 score: 1.
IPR015300	DNA-binding pseudobarrel domain	unknown	SSF101936	DNA-binding pseudobarrel domain	coord: 144..249 score: 5.3
None	No IPR available	PANTHER	PTHR31541	FAMILY NOT NAMED	coord: 51..274 score: 6.7
None	No IPR available	PANTHER	PTHR31541:SF22	SUBFAMILY NOT NAMED	coord: 51..274 score: 6.7

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g18490	Wax gourd	cpewgoB0491
Cp4.1LG01g18490	Cucurbita pepo (Zucchini)	cpecpeB199
Cp4.1LG01g18490	Cucumber (Gy14) v1	cgycpeB0523
Cp4.1LG01g18490	Cucurbita maxima (Rimu)	cmacpeB318
Cp4.1LG01g18490	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g18490	Cucurbita moschata (Rifu)	cmocpeB280
Cp4.1LG01g18490	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g18490	Wild cucumber (PI 183967)	cpecpiB444
Cp4.1LG01g18490	Cucumber (Chinese Long) v2	cpecuB443
Cp4.1LG01g18490	Bottle gourd (USVL1VR-Ls)	cpelsiB311
Cp4.1LG01g18490	Watermelon (Charleston Gray)	cpewcgB370
Cp4.1LG01g18490	Watermelon (97103) v1	cpewmB440
Cp4.1LG01g18490	Melon (DHL92) v3.5.1	cpemeB353
Cp4.1LG01g18490	Cucumber (Gy14) v2	cgybcpeB651
Cp4.1LG01g18490	Melon (DHL92) v3.6.1	cpemedB412
Cp4.1LG01g18490	Silver-seed gourd	carcpeB1228
Cp4.1LG01g18490	Cucumber (Chinese Long) v3	cpecucB0547