Cp4.1LG01g18120 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g18120
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionChaperone protein dnaJ 15
LocationCp4.1LG01 : 15042187 .. 15043102 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGGAAGATGCTGTATGCAAATGCCCAAGTTGAGACGTAAGAAGATTATTAATCTGCGTTGGTCTAATTTTAAAGAACATAAAGATTATTATGGTTAATTTGGTCAGACATTTTGTTTGAGGGTAATATCTGAAAGATGGAATTTTCTTTTTCTTCATCTTTTCAGCATGTTTGGAACTCGAGTGGTGATTGATATTCAGCTCTGTTACAGTTCAGCTAGGCTTTAGGTGCATTAACATTAAATTACGAATTGCTGCAAGTGGTTACAGAATAAGATTTCAGCTAGGCTCTTGGTGTATTAAATTAAGTTACGCATTTCAATTTCCTCCCTTCCACTTTCAAATTTTTATATAAAAAAGAAATAAATTTGTTTTCATCTTTTGAACCATCCATCTGCAAAGTGATTCTTACCCCAAAAAATGTGGTAGATATCATCCAGACAAGAATGGAAGTAACACCCTGAAGCTTCAGAGCATTTTAAGGAGGTCGCATATTCTTATAGCATCCTATCTGATCCAGAGAAGAGAAGGCAATATGACAGTGCTGGCTTTGAGGTGCTTGTCTCCTTGTCACCATCAACTTGTTATGATGCGTTGTTATGATATTTAAAGAGATACTTCATTATTTTCAAATTCAAGATTTATATACTTTTGTAGGCCTTATGTGGCTTACACATACTTCCATCCCATACATAGTATTTTATTTTTCCCAATCAAAGCTTTCTCTGAGATTCAAATTGAGGTCACGATTGTTAATTAACTCTTCCATTGTGTAATTAATGTGTTCAGGCCCTTGATGCTAGTGGCATGGATATGGAAATAGATTTGTCCAATCTTGGAACTGTCAATACCATGTTTGCAGCTTTGTTCAGTTGCAAATTTATTGAGTTATTTACTGGTCTAGTCGTCTAG

mRNA sequence

ATGAATGGGAAGATGCTGTATGCAAATGCCCAAGTTGAGACATATCATCCAGACAAGAATGGAAGTAACACCCTGAAGCTTCAGAGCATTTTAAGGAGGTCGCATATTCTTATAGCATCCTATCTGATCCAGAGAAGAGAAGGCAATATGACAGTGCTGGCTTTGAGGTGCTTGTCTCCTTGTCACCATCAACTTGCCCTTGATGCTAGTGGCATGGATATGGAAATAGATTTGTCCAATCTTGGAACTGTCAATACCATGTTTGCAGCTTTGTTCAGTTGCAAATTTATTGAGTTATTTACTGGTCTAGTCGTCTAG

Coding sequence (CDS)

ATGAATGGGAAGATGCTGTATGCAAATGCCCAAGTTGAGACATATCATCCAGACAAGAATGGAAGTAACACCCTGAAGCTTCAGAGCATTTTAAGGAGGTCGCATATTCTTATAGCATCCTATCTGATCCAGAGAAGAGAAGGCAATATGACAGTGCTGGCTTTGAGGTGCTTGTCTCCTTGTCACCATCAACTTGCCCTTGATGCTAGTGGCATGGATATGGAAATAGATTTGTCCAATCTTGGAACTGTCAATACCATGTTTGCAGCTTTGTTCAGTTGCAAATTTATTGAGTTATTTACTGGTCTAGTCGTCTAG

Protein sequence

MNGKMLYANAQVETYHPDKNGSNTLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDASGMDMEIDLSNLGTVNTMFAALFSCKFIELFTGLVV
Homology
[Close]
BLAST of Cp4.1LG01g18120 vs. Swiss-Prot
Match: DNJ15_ARATH (Chaperone protein dnaJ 15 OS=Arabidopsis thaliana GN=ATJ15 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07
Identity = 38/81 (46.91%), Postives = 46/81 (56.79%), Query Frame = 1 

Query: 15  YHPDKNGSN--TLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDASGM 74
           YHPDKN +N    +L   +  S+ +++    +R   N                ALDA GM
Sbjct: 44  YHPDKNANNPDASELFKEVAFSYSILSDPEKRRHYDNAGFE------------ALDADGM 103

Query: 75  DMEIDLSNLGTVNTMFAALFS 94
           DMEIDLSNLGTVNTMFAALFS
Sbjct: 104 DMEIDLSNLGTVNTMFAALFS 112

[Close]
BLAST of Cp4.1LG01g18120 vs. TrEMBL
Match: I1KKL2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.3e-11
Identity = 45/86 (52.33%), Postives = 56/86 (65.12%), Query Frame = 1 

Query: 11  QVETYHPDKNGSNTLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDAS 70
           +VE   P+ +  N      IL+   ++   +L Q+REG+MTVL LR +S C  + ALDA 
Sbjct: 108 KVERKIPEDDPRNPAVRNIILKLGPLI---WLTQKREGSMTVLDLRSISYCPFR-ALDAD 167

Query: 71  GMDMEIDLSNLGTVNTMFAALFSCKF 97
            MDMEIDLSNLGTVNTMF ALF C F
Sbjct: 168 SMDMEIDLSNLGTVNTMFTALFRCAF 189

[Close]
BLAST of Cp4.1LG01g18120 vs. TrEMBL
Match: A0A0A0KPP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577340 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.5e-07
Identity = 41/80 (51.25%), Postives = 47/80 (58.75%), Query Frame = 1 

Query: 15  YHPDKNGSNTLKLQSILRRSHIL-IASYLIQRREGNMTVLALRCLSPCHHQLALDASGMD 74
           YHPDKNGSN    +     ++   I S   +RR+ +                ALDASGMD
Sbjct: 45  YHPDKNGSNPEASELFKEVAYSYSILSDPEKRRQYDSAGFE-----------ALDASGMD 104

Query: 75  MEIDLSNLGTVNTMFAALFS 94
           MEIDLSNLGTVNTMFAALFS
Sbjct: 105 MEIDLSNLGTVNTMFAALFS 113

[Close]
BLAST of Cp4.1LG01g18120 vs. TrEMBL
Match: W9R9F6_9ROSA (Chaperone protein dnaJ 15 OS=Morus notabilis GN=L484_015448 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-06
Identity = 40/83 (48.19%), Postives = 48/83 (57.83%), Query Frame = 1 

Query: 12 VETYHPDKNGSNTLKLQSILRRSHIL-IASYLIQRREGNMTVLALRCLSPCHHQLALDAS 71
          ++ YHPDKN SN    +     ++   I S   +RR+ + T              ALDA 
Sbjct: 1  MDRYHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDSTGFE-----------ALDAE 60

Query: 72 GMDMEIDLSNLGTVNTMFAALFS 94
          GMDMEIDLSNLGTVNTMFAALFS
Sbjct: 61 GMDMEIDLSNLGTVNTMFAALFS 72

[Close]
BLAST of Cp4.1LG01g18120 vs. TrEMBL
Match: A0A103XVH4_CYNCS (DnaJ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_000275 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-06
Identity = 39/81 (48.15%), Postives = 47/81 (58.02%), Query Frame = 1 

Query: 15  YHPDKNGSN--TLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDASGM 74
           YHPDKN SN    +L   +  S+ +++    +R+  N                ALDA GM
Sbjct: 49  YHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDNAGFE------------ALDAEGM 108

Query: 75  DMEIDLSNLGTVNTMFAALFS 94
           DMEIDLSNLGTVNTMFAALFS
Sbjct: 109 DMEIDLSNLGTVNTMFAALFS 117

[Close]
BLAST of Cp4.1LG01g18120 vs. TrEMBL
Match: A0A068TX90_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032661001 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-06
Identity = 39/81 (48.15%), Postives = 47/81 (58.02%), Query Frame = 1 

Query: 15  YHPDKNGSN--TLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDASGM 74
           YHPDKN SN    +L   +  S+ +++    +R+  N                ALDA GM
Sbjct: 44  YHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDNSGFE------------ALDADGM 103

Query: 75  DMEIDLSNLGTVNTMFAALFS 94
           DMEIDLSNLGTVNTMFAALFS
Sbjct: 104 DMEIDLSNLGTVNTMFAALFS 112

[Close]
BLAST of Cp4.1LG01g18120 vs. TAIR10
Match: AT1G68370.1 (AT1G68370.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 6.2e-09
Identity = 38/81 (46.91%), Postives = 46/81 (56.79%), Query Frame = 1 

Query: 15  YHPDKNGSN--TLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDASGM 74
           YHPDKN +N    +L   +  S+ +++    +R   N                ALDA GM
Sbjct: 44  YHPDKNANNPDASELFKEVAFSYSILSDPEKRRHYDNAGFE------------ALDADGM 103

Query: 75  DMEIDLSNLGTVNTMFAALFS 94
           DMEIDLSNLGTVNTMFAALFS
Sbjct: 104 DMEIDLSNLGTVNTMFAALFS 112

[Close]
BLAST of Cp4.1LG01g18120 vs. NCBI nr
Match: gi|700196366|gb|KGN51543.1| (hypothetical protein Csa_5G577340 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-07
Identity = 41/80 (51.25%), Postives = 47/80 (58.75%), Query Frame = 1 

Query: 15  YHPDKNGSNTLKLQSILRRSHIL-IASYLIQRREGNMTVLALRCLSPCHHQLALDASGMD 74
           YHPDKNGSN    +     ++   I S   +RR+ +                ALDASGMD
Sbjct: 45  YHPDKNGSNPEASELFKEVAYSYSILSDPEKRRQYDSAGFE-----------ALDASGMD 104

Query: 75  MEIDLSNLGTVNTMFAALFS 94
           MEIDLSNLGTVNTMFAALFS
Sbjct: 105 MEIDLSNLGTVNTMFAALFS 113

[Close]
BLAST of Cp4.1LG01g18120 vs. NCBI nr
Match: gi|449458757|ref|XP_004147113.1| (PREDICTED: chaperone protein dnaJ 15-like [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-07
Identity = 41/80 (51.25%), Postives = 47/80 (58.75%), Query Frame = 1 

Query: 15  YHPDKNGSNTLKLQSILRRSHIL-IASYLIQRREGNMTVLALRCLSPCHHQLALDASGMD 74
           YHPDKNGSN    +     ++   I S   +RR+ +                ALDASGMD
Sbjct: 45  YHPDKNGSNPEASELFKEVAYSYSILSDPEKRRQYDSAGFE-----------ALDASGMD 104

Query: 75  MEIDLSNLGTVNTMFAALFS 94
           MEIDLSNLGTVNTMFAALFS
Sbjct: 105 MEIDLSNLGTVNTMFAALFS 113

[Close]
BLAST of Cp4.1LG01g18120 vs. NCBI nr
Match: gi|659072974|ref|XP_008467194.1| (PREDICTED: chaperone protein dnaJ 15-like [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-07
Identity = 41/80 (51.25%), Postives = 47/80 (58.75%), Query Frame = 1 

Query: 15  YHPDKNGSNTLKLQSILRRSHIL-IASYLIQRREGNMTVLALRCLSPCHHQLALDASGMD 74
           YHPDKNGSN    +     ++   I S   +RR+ +                ALDASGMD
Sbjct: 45  YHPDKNGSNPEASELFKEVAYSYSILSDPEKRRQYDSAGFE-----------ALDASGMD 104

Query: 75  MEIDLSNLGTVNTMFAALFS 94
           MEIDLSNLGTVNTMFAALFS
Sbjct: 105 MEIDLSNLGTVNTMFAALFS 113

[Close]
BLAST of Cp4.1LG01g18120 vs. NCBI nr
Match: gi|703109315|ref|XP_010099258.1| (Chaperone protein dnaJ 15 [Morus notabilis])

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-06
Identity = 40/83 (48.19%), Postives = 48/83 (57.83%), Query Frame = 1 

Query: 12 VETYHPDKNGSNTLKLQSILRRSHIL-IASYLIQRREGNMTVLALRCLSPCHHQLALDAS 71
          ++ YHPDKN SN    +     ++   I S   +RR+ + T              ALDA 
Sbjct: 1  MDRYHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDSTGFE-----------ALDAE 60

Query: 72 GMDMEIDLSNLGTVNTMFAALFS 94
          GMDMEIDLSNLGTVNTMFAALFS
Sbjct: 61 GMDMEIDLSNLGTVNTMFAALFS 72

[Close]
BLAST of Cp4.1LG01g18120 vs. NCBI nr
Match: gi|923758436|ref|XP_013676441.1| (PREDICTED: chaperone protein dnaJ 15-like isoform X1 [Brassica napus])

HSP 1 Score: 59.7 bits (143), Expect = 3.6e-06
Identity = 38/81 (46.91%), Postives = 48/81 (59.26%), Query Frame = 1 

Query: 15  YHPDKNGSN--TLKLQSILRRSHILIASYLIQRREGNMTVLALRCLSPCHHQLALDASGM 74
           YHPDKN +N    +L   +  S+ +++    +R+  N   +            ALDA GM
Sbjct: 44  YHPDKNANNPDASELFKEVAYSYSILSDPEKRRQYDNAGFV------------ALDADGM 103

Query: 75  DMEIDLSNLGTVNTMFAALFS 94
           DMEIDLSNLGTVNTMFAALFS
Sbjct: 104 DMEIDLSNLGTVNTMFAALFS 112

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g18120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DNJ15_ARATH1.1e-0746.91Chaperone protein dnaJ 15 OS=Arabidopsis thaliana GN=ATJ15 PE=1 SV=1[more]
BLAST of Cp4.1LG01g18120 vs. TrEMBL
Match NameE-valueIdentityDescription
I1KKL2_SOYBN3.3e-1152.33Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0A0KPP4_CUCSA6.5e-0751.25Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577340 PE=4 SV=1[more]
W9R9F6_9ROSA1.1e-0648.19Chaperone protein dnaJ 15 OS=Morus notabilis GN=L484_015448 PE=4 SV=1[more]
A0A103XVH4_CYNCS3.2e-0648.15DnaJ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_00027... [more]
A0A068TX90_COFCA3.2e-0648.15Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032661001 PE=4 SV=1[more]
BLAST of Cp4.1LG01g18120 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68370.16.2e-0946.91 Chaperone DnaJ-domain superfamily protein[more]
BLAST of Cp4.1LG01g18120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196366|gb|KGN51543.1|9.3e-0751.25hypothetical protein Csa_5G577340 [Cucumis sativus][more]
gi|449458757|ref|XP_004147113.1|9.3e-0751.25PREDICTED: chaperone protein dnaJ 15-like [Cucumis sativus][more]
gi|659072974|ref|XP_008467194.1|9.3e-0751.25PREDICTED: chaperone protein dnaJ 15-like [Cucumis melo][more]
gi|703109315|ref|XP_010099258.1|1.6e-0648.19Chaperone protein dnaJ 15 [Morus notabilis][more]
gi|923758436|ref|XP_013676441.1|3.6e-0646.91PREDICTED: chaperone protein dnaJ 15-like isoform X1 [Brassica napus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g18120.1Cp4.1LG01g18120.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g18120CmoCh04G021670Cucurbita moschata (Rifu)cmocpeB688
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g18120Melon (DHL92) v3.6.1cpemedB431
Cp4.1LG01g18120Melon (DHL92) v3.6.1cpemedB464
Cp4.1LG01g18120Silver-seed gourdcarcpeB0385
Cp4.1LG01g18120Silver-seed gourdcarcpeB1112
Cp4.1LG01g18120Silver-seed gourdcarcpeB1181
Cp4.1LG01g18120Silver-seed gourdcarcpeB1317
Cp4.1LG01g18120Silver-seed gourdcarcpeB1467
Cp4.1LG01g18120Cucumber (Chinese Long) v3cpecucB0535
Cp4.1LG01g18120Cucumber (Chinese Long) v3cpecucB0536
Cp4.1LG01g18120Cucumber (Chinese Long) v3cpecucB0547
Cp4.1LG01g18120Cucumber (Chinese Long) v3cpecucB0562
Cp4.1LG01g18120Cucumber (Chinese Long) v3cpecucB0575
Cp4.1LG01g18120Wax gourdcpewgoB0496
Cp4.1LG01g18120Wax gourdcpewgoB0530
Cp4.1LG01g18120Wax gourdcpewgoB0565
Cp4.1LG01g18120Cucurbita pepo (Zucchini)cpecpeB042
Cp4.1LG01g18120Cucurbita pepo (Zucchini)cpecpeB201
Cp4.1LG01g18120Cucurbita pepo (Zucchini)cpecpeB378
Cp4.1LG01g18120Cucumber (Gy14) v1cgycpeB0738
Cp4.1LG01g18120Cucumber (Gy14) v1cgycpeB0752
Cp4.1LG01g18120Cucumber (Gy14) v1cgycpeB0757
Cp4.1LG01g18120Cucumber (Gy14) v1cgycpeB0962
Cp4.1LG01g18120Cucurbita maxima (Rimu)cmacpeB310
Cp4.1LG01g18120Cucurbita maxima (Rimu)cmacpeB321
Cp4.1LG01g18120Cucurbita maxima (Rimu)cmacpeB430
Cp4.1LG01g18120Cucurbita maxima (Rimu)cmacpeB728
Cp4.1LG01g18120Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g18120Cucurbita maxima (Rimu)cmacpeB735
Cp4.1LG01g18120Cucurbita moschata (Rifu)cmocpeB273
Cp4.1LG01g18120Cucurbita moschata (Rifu)cmocpeB283
Cp4.1LG01g18120Cucurbita moschata (Rifu)cmocpeB400
Cp4.1LG01g18120Cucurbita moschata (Rifu)cmocpeB394
Cp4.1LG01g18120Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g18120Cucurbita moschata (Rifu)cmocpeB681
Cp4.1LG01g18120Wild cucumber (PI 183967)cpecpiB430
Cp4.1LG01g18120Wild cucumber (PI 183967)cpecpiB455
Cp4.1LG01g18120Wild cucumber (PI 183967)cpecpiB467
Cp4.1LG01g18120Cucumber (Chinese Long) v2cpecuB456
Cp4.1LG01g18120Cucumber (Chinese Long) v2cpecuB431
Cp4.1LG01g18120Cucumber (Chinese Long) v2cpecuB434
Cp4.1LG01g18120Cucumber (Chinese Long) v2cpecuB466
Cp4.1LG01g18120Bottle gourd (USVL1VR-Ls)cpelsiB311
Cp4.1LG01g18120Bottle gourd (USVL1VR-Ls)cpelsiB357
Cp4.1LG01g18120Bottle gourd (USVL1VR-Ls)cpelsiB385
Cp4.1LG01g18120Watermelon (Charleston Gray)cpewcgB370
Cp4.1LG01g18120Watermelon (Charleston Gray)cpewcgB375
Cp4.1LG01g18120Watermelon (Charleston Gray)cpewcgB390
Cp4.1LG01g18120Watermelon (Charleston Gray)cpewcgB420
Cp4.1LG01g18120Watermelon (97103) v1cpewmB429
Cp4.1LG01g18120Watermelon (97103) v1cpewmB398
Cp4.1LG01g18120Watermelon (97103) v1cpewmB440
Cp4.1LG01g18120Melon (DHL92) v3.5.1cpemeB355
Cp4.1LG01g18120Melon (DHL92) v3.5.1cpemeB373
Cp4.1LG01g18120Melon (DHL92) v3.5.1cpemeB399
Cp4.1LG01g18120Melon (DHL92) v3.6.1cpemedB415
Cp4.1LG01g18120Cucumber (Gy14) v2cgybcpeB644
Cp4.1LG01g18120Cucumber (Gy14) v2cgybcpeB804