Cp4.1LG01g17830 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g17830
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPathogenesis-related protein 1
LocationCp4.1LG01 : 14062174 .. 14062677 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGACTCAAACCCTTCCGATCATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACACCCCCCGTGCCTACCTCGCGCTTCACAACCGAGCTCGAGCCCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAGAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGACCGTACGGGGAAAACATAGCCGCAGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTGTACGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGTAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCATGTAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGAAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGA

mRNA sequence

ATGTGGACTCAAACCCTTCCGATCATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACACCCCCCGTGCCTACCTCGCGCTTCACAACCGAGCTCGAGCCCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAGAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGACCAGTGCCATGTAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGAAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGA

Coding sequence (CDS)

ATGTGGACTCAAACCCTTCCGATCATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACACCCCCCGTGCCTACCTCGCGCTTCACAACCGAGCTCGAGCCCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAGAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGACCAGTGCCATGTAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGAAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGA

Protein sequence

MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV
Homology
[Close]
BLAST of Cp4.1LG01g17830 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.3e-15
Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 1 

Query: 8  IMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKG 67
          I+A F+ TF  L+  + AQN+P+ YL  HN AR QVGVGPM W N +AAYAQ YA +R G
Sbjct: 7  IVACFI-TFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIG 66

Query: 68 DCAMIHSTGP 78
          DC MIHS GP
Sbjct: 67 DCGMIHSHGP 75

[Close]
BLAST of Cp4.1LG01g17830 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.3e-13
Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 1 

Query: 9  MAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
          +  F+A    L+  + AQ++P+ YL +HN+AR  VGVGPMQW   VAAYA++YAE+ +G+
Sbjct: 10 LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 69 CAMIHSTGP 78
          C +IHS GP
Sbjct: 70 CRLIHSGGP 78

[Close]
BLAST of Cp4.1LG01g17830 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 7.6e-12
Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 1 

Query: 2  WTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAY 61
          +++ L I+AA +   +  L    AQ++ + Y+  HN+AR+Q+GVGPMQW   +AAYA+ Y
Sbjct: 6  YSRILIILAALVGALVVPL---KAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNY 65

Query: 62 AEKRKGDCAMIHSTGP 78
          A + KGDC ++HS GP
Sbjct: 66 ANQLKGDCRLVHSRGP 78

[Close]
BLAST of Cp4.1LG01g17830 vs. Swiss-Prot
Match: PR04_SOLLC (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-11
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1 

Query: 11 AFMATFIFLLALTN---AQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKG 70
          + + T + +LA+ +   AQN+P+ YLA+HN ARAQVGVGPM W   +A+ AQ YA  R G
Sbjct: 7  SLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG 66

Query: 71 DCAMIHS 75
          DC +IHS
Sbjct: 67 DCNLIHS 73

[Close]
BLAST of Cp4.1LG01g17830 vs. Swiss-Prot
Match: PR06_SOLLC (Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum GN=PR1B1 PE=1 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-11
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1 

Query: 11 AFMATFIFLLALTN---AQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKG 70
          + + T + +LA+ +   AQN+P+ YLA+HN ARAQVGVGPM W   +A+ AQ YA  R G
Sbjct: 7  SLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG 66

Query: 71 DCAMIHS 75
          DC +IHS
Sbjct: 67 DCNLIHS 73

[Close]
BLAST of Cp4.1LG01g17830 vs. TrEMBL
Match: A0A0A0LLX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 7.6e-19
Identity = 47/69 (68.12%), Postives = 55/69 (79.71%), Query Frame = 1 

Query: 9  MAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
          MA F   F F   LT+AQN P+ Y++LHN+ARA VGVGPM W+NTVAAYAQ+YA KRK D
Sbjct: 1  MAIFFPIFTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKND 60

Query: 69 CAMIHSTGP 78
          CA+IHSTGP
Sbjct: 61 CALIHSTGP 69

[Close]
BLAST of Cp4.1LG01g17830 vs. TrEMBL
Match: A0A0A0KHP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.9e-18
Identity = 43/61 (70.49%), Postives = 53/61 (86.89%), Query Frame = 1 

Query: 17 IFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTG 76
          +FL  LT+AQN+P+ Y++LHN+ARA VGVGPM W NTVAAYAQ+YA KRK DCA++HSTG
Sbjct: 1  MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 77 P 78
          P
Sbjct: 61 P 61

[Close]
BLAST of Cp4.1LG01g17830 vs. TrEMBL
Match: A0A0A0LSG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-17
Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 1 

Query: 9  MAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
          MA F  TF FL  LT AQ +P+ Y++LHN+ARA V VGPM W+ TVAAYAQ+YA KRK D
Sbjct: 1  MAIFFPTFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKND 60

Query: 69 CAMIHSTGP 78
          CA++HSTGP
Sbjct: 61 CALVHSTGP 69

[Close]
BLAST of Cp4.1LG01g17830 vs. TrEMBL
Match: U7E120_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0473s00220g PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-15
Identity = 49/138 (35.51%), Postives = 62/138 (44.93%), Query Frame = 1 

Query: 9   MAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
           +A F    + L+  + AQ+ P+ YL  HN ARA VGVGP+ W  TV AYAQ YA +R GD
Sbjct: 8   LAFFTLITLSLILPSRAQDNPQDYLDAHNAARAAVGVGPLTWDTTVQAYAQNYANQRAGD 67

Query: 69  CAMIHS-------------------------------------------TGPVPCKANSQ 104
           C ++HS                                              V C     
Sbjct: 68  CNLVHSGTDAVKMWVDEKAYYDYNSNSCAAGQQCGHYTQVVWRNSARLGCAKVKCSTGGT 127

[Close]
BLAST of Cp4.1LG01g17830 vs. TrEMBL
Match: K4CQ91_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.0e-15
Identity = 43/98 (43.88%), Postives = 55/98 (56.12%), Query Frame = 1 

Query: 24  NAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHS--------- 83
           +AQN+P+ YL +HN AR QVGVGPM W + +A  AQ YA+ R+GDC +IHS         
Sbjct: 23  DAQNSPQDYLVVHNNARGQVGVGPMSWDDALATKAQRYADSRRGDCNLIHSGPGENLAKV 82

Query: 84  ---------TGPVPCKANSQFVVCNYDPPGNYIGEKPY 104
                     G   C     F+ CNY P GN IG++PY
Sbjct: 83  VWRTSIRLGCGRARCNNGWWFICCNYAPFGNIIGQRPY 120

[Close]
BLAST of Cp4.1LG01g17830 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 80.9 bits (198), Expect = 5.4e-16
Identity = 36/61 (59.02%), Postives = 49/61 (80.33%), Query Frame = 1 

Query: 16 FIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHST 75
          F+ L+    AQ++P+ +LA+HNRARA+VGVGP++W   VAAYA+ YA +RKGDCAM HS+
Sbjct: 17 FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 76 G 77
          G
Sbjct: 77 G 77

[Close]
BLAST of Cp4.1LG01g17830 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 75.1 bits (183), Expect = 3.0e-14
Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 1 

Query: 9  MAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
          +  F+A    L+  + AQ++P+ YL +HN+AR  VGVGPMQW   VAAYA++YAE+ +G+
Sbjct: 10 LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 69 CAMIHSTGP 78
          C +IHS GP
Sbjct: 70 CRLIHSGGP 78

[Close]
BLAST of Cp4.1LG01g17830 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 74.3 bits (181), Expect = 5.1e-14
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 1 

Query: 18 FLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGP 77
          FL+  TNAQNTP+ YL  HN ARAQVGV  + W  T+AAYA  Y+  RK DC ++HS GP
Sbjct: 16 FLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGP 75

[Close]
BLAST of Cp4.1LG01g17830 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 71.2 bits (173), Expect = 4.3e-13
Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 1 

Query: 2  WTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAY 61
          +++ L I+AA +   +  L    AQ++ + Y+  HN+AR+Q+GVGPMQW   +AAYA+ Y
Sbjct: 6  YSRILIILAALVGALVVPL---KAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNY 65

Query: 62 AEKRKGDCAMIHSTGP 78
          A + KGDC ++HS GP
Sbjct: 66 ANQLKGDCRLVHSRGP 78

[Close]
BLAST of Cp4.1LG01g17830 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 69.7 bits (169), Expect = 1.2e-12
Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 1 

Query: 21 ALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGP 78
          A  N    P+  L +HN+ARA VGVGPM W+ T+A YAQ+YA +R  DCAM HS GP
Sbjct: 34 ANANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGP 90

[Close]
BLAST of Cp4.1LG01g17830 vs. NCBI nr
Match: gi|778730838|ref|XP_011659865.1| (PREDICTED: basic form of pathogenesis-related protein 1-like, partial [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-23
Identity = 58/120 (48.33%), Postives = 70/120 (58.33%), Query Frame = 1 

Query: 25  AQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGP------- 84
           AQN+P+ Y++LHN+ARA VGVGPM W+NTVAAYAQ+YA KR  DC ++HSTGP       
Sbjct: 8   AQNSPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRINDCTLVHSTGPYGENLTH 67

Query: 85  --------------------------------VPCKANSQFVVCNYDPPGNYIGEKPYDS 106
                                           V CK  SQFV+CNYDPPGNYIG +PY+S
Sbjct: 68  LYDYASNSCKGGDCGHYTQVVWRTSMHLGCARVACKGKSQFVICNYDPPGNYIGLRPYNS 127

[Close]
BLAST of Cp4.1LG01g17830 vs. NCBI nr
Match: gi|778722387|ref|XP_011658476.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-19
Identity = 47/69 (68.12%), Postives = 57/69 (82.61%), Query Frame = 1 

Query: 9  MAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
          MA    TF+FL  LT+AQN+P+ Y++LHN+ARA VGVGPM W NTVAAYAQ+YA KRK D
Sbjct: 1  MAILFPTFMFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKND 60

Query: 69 CAMIHSTGP 78
          CA++HSTGP
Sbjct: 61 CALVHSTGP 69

[Close]
BLAST of Cp4.1LG01g17830 vs. NCBI nr
Match: gi|700207816|gb|KGN62935.1| (hypothetical protein Csa_2G381130 [Cucumis sativus])

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-18
Identity = 47/69 (68.12%), Postives = 55/69 (79.71%), Query Frame = 1 

Query: 9  MAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
          MA F   F F   LT+AQN P+ Y++LHN+ARA VGVGPM W+NTVAAYAQ+YA KRK D
Sbjct: 1  MAIFFPIFTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKND 60

Query: 69 CAMIHSTGP 78
          CA+IHSTGP
Sbjct: 61 CALIHSTGP 69

[Close]
BLAST of Cp4.1LG01g17830 vs. NCBI nr
Match: gi|700193135|gb|KGN48339.1| (hypothetical protein Csa_6G483242 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 7.1e-18
Identity = 43/61 (70.49%), Postives = 53/61 (86.89%), Query Frame = 1 

Query: 17 IFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTG 76
          +FL  LT+AQN+P+ Y++LHN+ARA VGVGPM W NTVAAYAQ+YA KRK DCA++HSTG
Sbjct: 1  MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 77 P 78
          P
Sbjct: 61 P 61

[Close]
BLAST of Cp4.1LG01g17830 vs. NCBI nr
Match: gi|297736380|emb|CBI25103.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 97.4 bits (241), Expect = 1.6e-17
Identity = 51/133 (38.35%), Postives = 68/133 (51.13%), Query Frame = 1 

Query: 8   IMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKG 67
           ++  FM   + L  ++ AQN+P+ +L  HN ARA+VGVGPM W NTVAAYAQ Y  +R G
Sbjct: 10  LVVGFMG--LVLAHISYAQNSPQDFLDAHNVARAEVGVGPMSWDNTVAAYAQNYTNQRIG 69

Query: 68  DCAMIHSTGP-------------------------------------VPCKANSQFVVCN 104
           DC ++HS GP                                       C +   FV CN
Sbjct: 70  DCNLVHSGGPYGENLAWGSPSLTGIDAVNLHYTQVIWRNSLRLGCARAQCNSGGWFVTCN 129

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g17830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRB1_TOBAC4.3e-1560.00Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1[more]
PR1_ARATH5.3e-1350.72Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1[more]
PRB1_ARATH7.6e-1244.74Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1[more]
PR04_SOLLC2.2e-1152.24Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1[more]
PR06_SOLLC2.2e-1152.24Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum GN=PR1B1 PE=1 SV=2[more]
BLAST of Cp4.1LG01g17830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLX7_CUCSA7.6e-1968.12Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1[more]
A0A0A0KHP4_CUCSA4.9e-1870.49Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1[more]
A0A0A0LSG5_CUCSA1.4e-1765.22Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1[more]
U7E120_POPTR2.3e-1535.51Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0473s00220g PE=3 SV=1[more]
K4CQ91_SOLLC3.0e-1543.88Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1[more]
BLAST of Cp4.1LG01g17830 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33720.15.4e-1659.02 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G14610.13.0e-1450.72 pathogenesis-related gene 1[more]
AT1G50060.15.1e-1458.33 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G14580.14.3e-1344.74 basic pathogenesis-related protein 1[more]
AT2G19990.11.2e-1256.14 pathogenesis-related protein-1-like[more]
BLAST of Cp4.1LG01g17830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730838|ref|XP_011659865.1|1.1e-2348.33PREDICTED: basic form of pathogenesis-related protein 1-like, partial [Cucumis s... [more]
gi|778722387|ref|XP_011658476.1|1.7e-1968.12PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus][more]
gi|700207816|gb|KGN62935.1|1.1e-1868.12hypothetical protein Csa_2G381130 [Cucumis sativus][more]
gi|700193135|gb|KGN48339.1|7.1e-1870.49hypothetical protein Csa_6G483242 [Cucumis sativus][more]
gi|297736380|emb|CBI25103.3|1.6e-1738.35unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: INTERPRO
TermDefinition
IPR018244Allrgn_V5/Tpx1_CS
IPR014044CAP_domain
IPR001283Allrgn_V5/Tpx1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17830.1Cp4.1LG01g17830.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 1..108
score: 2.7
IPR014044CAP domainGENE3DG3DSA:3.40.33.10coord: 80..105
score: 5.2E-7coord: 26..75
score: 4.5
IPR014044CAP domainPFAMPF00188CAPcoord: 33..65
score: 2.
IPR014044CAP domainSMARTSM00198SCP_3coord: 27..99
score: 7.
IPR014044CAP domainunknownSSF55797PR-1-likecoord: 27..104
score: 1.57
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 86..97
scor
NoneNo IPR availablePANTHERPTHR10334:SF223F2J10.6 PROTEIN-RELATEDcoord: 1..108
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g17830Cucurbita pepo (Zucchini)cpecpeB037
Cp4.1LG01g17830Cucumber (Gy14) v1cgycpeB0757
Cp4.1LG01g17830Cucurbita maxima (Rimu)cmacpeB436
Cp4.1LG01g17830Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g17830Cucurbita moschata (Rifu)cmocpeB286
Cp4.1LG01g17830Cucurbita moschata (Rifu)cmocpeB400
Cp4.1LG01g17830Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g17830Cucurbita moschata (Rifu)cmocpeB680
Cp4.1LG01g17830Wild cucumber (PI 183967)cpecpiB429
Cp4.1LG01g17830Wild cucumber (PI 183967)cpecpiB435
Cp4.1LG01g17830Cucumber (Chinese Long) v2cpecuB434
Cp4.1LG01g17830Cucumber (Chinese Long) v2cpecuB436
Cp4.1LG01g17830Bottle gourd (USVL1VR-Ls)cpelsiB313
Cp4.1LG01g17830Watermelon (Charleston Gray)cpewcgB381
Cp4.1LG01g17830Watermelon (Charleston Gray)cpewcgB400
Cp4.1LG01g17830Watermelon (97103) v1cpewmB439
Cp4.1LG01g17830Melon (DHL92) v3.5.1cpemeB352
Cp4.1LG01g17830Melon (DHL92) v3.5.1cpemeB387
Cp4.1LG01g17830Cucumber (Gy14) v2cgybcpeB639
Cp4.1LG01g17830Cucumber (Gy14) v2cgybcpeB640
Cp4.1LG01g17830Melon (DHL92) v3.6.1cpemedB413
Cp4.1LG01g17830Silver-seed gourdcarcpeB1450
Cp4.1LG01g17830Cucumber (Chinese Long) v3cpecucB0530
Cp4.1LG01g17830Cucumber (Chinese Long) v3cpecucB0535
Cp4.1LG01g17830Wax gourdcpewgoB0574