Cp4.1LG01g17580 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g17580
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein TRANSPARENT TESTA 1-like protein
LocationCp4.1LG01 : 13481581 .. 13483282 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCATCTCCTTTAATAACAAAAGTGGGAGAGAGTGACCCACGCCTTCGATTCTACTGTTTTCCATGTCCTCTCACTCTATTTTGCTTCTCTCTATCTATCATTCCTCACTCTATCTTCCTCCCCTCAGATAAAAGAAAGAGCGGTACGCCATTCTAGGCATGGACTTGGCCCACTCCTTCTCCTTCTTTGCCGCTTCCTTGTCTCCTCCATTCCCATTCCTCTCCACCTTAACCTCTGCATATCAACTTCCCACCTCAATGTCTAATTCAACTCAACTCTTTTCTCGTCTTTTATTTTAATATTAATATATCCAACATCTGATCATGTTAATATGTATTTAAATATTTGACGTTTATAACAGATAATATCATCTAGTTGTGTTACCCTTTCTTTATTTATTGCCTGTTTTCCTTCCATGCTCCACACCTATCTTCTCTCTCACGGAAAGGTCTGTCTTTTTAATCAACAAACATGCGGAGTGGGAACTTGACTTGCATATCGTCGAGTGAGAGCGCGTGTTTGGAGGGTGATGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGAAGACTCCATTTTCCTATCCCTTTGTCCGCCAGGCCAACGCCACACAGTTTCTTCCAAACACCGACAACTCCAAAACAAACAAAATCCTGTTACCCCTAATTCCTCTCTCCAAAACCCTAATATTCTTCATCATCAACATGCTGCTGTCACCGTCGCTATGCATATTGGTCCCCCTGCCACCGCCGCCGCCACCGAATCCAACGACGTCTCGGCTGCCCGCCCGGTTGATGGGCAGTACTGGATTCCTACGCCTGCCCAAATCCTCGTTGGTCCCACCCAGTTCTCCTGCTCTGTCTGCAGTAAAACCTTCAACAGATACAACAACATGCAGGTTATTTCCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAAAATCTTTCAGTTTGATTTGCTACATAGACATATTCTTTTGGTTTTTCTGTTTTTTATGAATTGAAAAAAGCATGGAGTTAAAAAAGAAAAGGTTCGTTTTAAAATTTTTTGTAGTGATTCTTGTTTCAAGTTATGATTTAAGAACAAAATGGAGTAGAAATAGAGGCAAAATTGAGACTTAAAACACGATTTGAAAGGAAAATTTGAGGTATGAGAGGCTAAATTTGACCCAAAGAAGTTGAATTTTGCAAAAACAGATGCACATGTGGGGACATGGATCACAGTACAGAAAAGGGCCAGAATCATTAAGAGGATCAAAGCCAGCTTCATCAATGCTACGACTTCCATGCTATTGCTGTGCAGAAGGGTGCAAAAACAACATAGAGCATCCAAGGTCAAGGCCATTGAAAGACTTCAGGACTCTTCAGACCCATTACAAGAGAAAGCATGGAGCAAAGCCTTTCAGTTGTAGGAAATGTGGGAAGCCCTTTGCAGTCCGAGGGGATTGGAGGACACATGAGAAGAACTGTGGAAAGCTTTGGTTTTGCATTTGTGGGTCTGATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTCGAGCCTTTGGAGATGGGCATGCACCTCATACGGTCCAACTTTGTGAGGTTGAAGATGATGATTGGGATGATAATGATGATCATGAACATGTAAATGGATCTCAACCCTGGTCAATTTATCATTAATTTTAATTTCCATGCTTCTTAATTAATCTACCAT

mRNA sequence

GCATCTCCTTTAATAACAAAAGTGGGAGAGAGTGACCCACGCCTTCGATTCTACTGTTTTCCATGTCCTCTCACTCTATTTTGCTTCTCTCTATCTATCATTCCTCACTCTATCTTCCTCCCCTCAGATAAAAGAAAGAGCGGTACGCCATTCTAGGCATGGACTTGGCCCACTCCTTCTCCTTCTTTGCCGCTTCCTTGTCTCCTCCATTCCCATTCCTCTCCACCTTAACCTCTGCATATCAACTTCCCACCTCAATGTCTAATTCAACTCAACTCTTTTCTCGTCTTTTATTTTAATATTAATATATCCAACATCTGATCATGTTAATATGTATTTAAATATTTGACGTTTATAACAGATAATATCATCTAGTTGTGTTACCCTTTCTTTATTTATTGCCTGTTTTCCTTCCATGCTCCACACCTATCTTCTCTCTCACGGAAAGGTCTGTCTTTTTAATCAACAAACATGCGGAGTGGGAACTTGACTTGCATATCGTCGAGTGAGAGCGCGTGTTTGGAGGGTGATGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGAAGACTCCATTTTCCTATCCCTTTGTCCGCCAGGCCAACGCCACACAGTTTCTTCCAAACACCGACAACTCCAAAACAAACAAAATCCTGTTACCCCTAATTCCTCTCTCCAAAACCCTAATATTCTTCATCATCAACATGCTGCTGTCACCGTCGCTATGCATATTGGTCCCCCTGCCACCGCCGCCGCCACCGAATCCAACGACGTCTCGGCTGCCCGCCCGGTTGATGGGCAGTACTGGATTCCTACGCCTGCCCAAATCCTCGTTGGTCCCACCCAGTTCTCCTGCTCTGTCTGCAGTAAAACCTTCAACAGATACAACAACATGCAGATGCACATGTGGGGACATGGATCACAGTACAGAAAAGGGCCAGAATCATTAAGAGGATCAAAGCCAGCTTCATCAATGCTACGACTTCCATGCTATTGCTGTGCAGAAGGGTGCAAAAACAACATAGAGCATCCAAGGTCAAGGCCATTGAAAGACTTCAGGACTCTTCAGACCCATTACAAGAGAAAGCATGGAGCAAAGCCTTTCAGTTGTAGGAAATGTGGGAAGCCCTTTGCAGTCCGAGGGGATTGGAGGACACATGAGAAGAACTGTGGAAAGCTTTGGTTTTGCATTTGTGGGTCTGATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTCGAGCCTTTGGAGATGGGCATGCACCTCATACGGTCCAACTTTGTGAGGTTGAAGATGATGATTGGGATGATAATGATGATCATGAACATGTAAATGGATCTCAACCCTGGTCAATTTATCATTAATTTTAATTTCCATGCTTCTTAATTAATCTACCAT

Coding sequence (CDS)

ATGCGGAGTGGGAACTTGACTTGCATATCGTCGAGTGAGAGCGCGTGTTTGGAGGGTGATGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGAAGACTCCATTTTCCTATCCCTTTGTCCGCCAGGCCAACGCCACACAGTTTCTTCCAAACACCGACAACTCCAAAACAAACAAAATCCTGTTACCCCTAATTCCTCTCTCCAAAACCCTAATATTCTTCATCATCAACATGCTGCTGTCACCGTCGCTATGCATATTGGTCCCCCTGCCACCGCCGCCGCCACCGAATCCAACGACGTCTCGGCTGCCCGCCCGGTTGATGGGCAGTACTGGATTCCTACGCCTGCCCAAATCCTCGTTGGTCCCACCCAGTTCTCCTGCTCTGTCTGCAGTAAAACCTTCAACAGATACAACAACATGCAGATGCACATGTGGGGACATGGATCACAGTACAGAAAAGGGCCAGAATCATTAAGAGGATCAAAGCCAGCTTCATCAATGCTACGACTTCCATGCTATTGCTGTGCAGAAGGGTGCAAAAACAACATAGAGCATCCAAGGTCAAGGCCATTGAAAGACTTCAGGACTCTTCAGACCCATTACAAGAGAAAGCATGGAGCAAAGCCTTTCAGTTGTAGGAAATGTGGGAAGCCCTTTGCAGTCCGAGGGGATTGGAGGACACATGAGAAGAACTGTGGAAAGCTTTGGTTTTGCATTTGTGGGTCTGATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTCGAGCCTTTGGAGATGGGCATGCACCTCATACGGTCCAACTTTGTGAGGTTGAAGATGATGATTGGGATGATAATGATGATCATGAACATGTAAATGGATCTCAACCCTGGTCAATTTATCATTAA

Protein sequence

MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNPVTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGSQPWSIYH
Homology
[Close]
BLAST of Cp4.1LG01g17580 vs. Swiss-Prot
Match: ZWIP6_ARATH (Zinc finger protein WIP6 OS=Arabidopsis thaliana GN=WIP6 PE=2 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 5.0e-98
Identity = 177/260 (68.08%), Postives = 202/260 (77.69%), Query Frame = 1 

Query: 29  GGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNPVTPNSSLQNPNILHHQHAAVTVAMHIGP 88
           G EDS+ LSL PPGQ++   +K    +   +    N  L NPN        VTVA+HIGP
Sbjct: 11  GDEDSVVLSLGPPGQQYPSHNKPTSTKPSSDHEF-NHPLTNPN-------GVTVALHIGP 70

Query: 89  PATAAATES--NDVSAARPVDGQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWG 148
           P++   T S  N+        GQYWIP+ +QILVGPTQFSCSVC+KTFNR+NNMQMHMWG
Sbjct: 71  PSSDKETLSGGNNQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWG 130

Query: 149 HGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHG 208
           HGSQYRKGPESLRG+K +SS+LRLPCYCCAEGCKNNI+HPRS+PLKDFRTLQTHYKRKHG
Sbjct: 131 HGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHG 190

Query: 209 AKPFSCR-KCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHT 268
           AKPF CR KC K FAVRGDWRTHEKNCGKLWFC+CGSDFKHKRSLKDHVRAFGDGHA HT
Sbjct: 191 AKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHT 250

Query: 269 V--QLCEVEDDDWDDNDDHE 284
           V  ++  + D D DD ++ E
Sbjct: 251 VSDRVVGIGDADEDDEEEEE 262

[Close]
BLAST of Cp4.1LG01g17580 vs. Swiss-Prot
Match: ZWIP2_ARATH (Zinc finger protein WIP2 OS=Arabidopsis thaliana GN=WIP2 PE=1 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.8e-85
Identity = 138/180 (76.67%), Postives = 158/180 (87.78%), Query Frame = 1 

Query: 108 GQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSM 167
           GQYWIPTP+QIL+GPTQFSC VC KTFNRYNNMQMHMWGHGSQYRKGPESLRG++P + M
Sbjct: 200 GQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP-TGM 259

Query: 168 LRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRT 227
           LRLPCYCCA GC+NNI+HPR++PLKDFRTLQTHYKRKHG KPF CRKCGK FAVRGDWRT
Sbjct: 260 LRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRT 319

Query: 228 HEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDD----NDDHE 284
           HEKNCGKLW+CICGSDFKHKRSLKDH++AFG+GH  + +   + ED+   +    ++DHE
Sbjct: 320 HEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGIDGFDEEDEPASEVEQLDNDHE 378

[Close]
BLAST of Cp4.1LG01g17580 vs. Swiss-Prot
Match: ZWIP5_ARATH (Zinc finger protein WIP5 OS=Arabidopsis thaliana GN=WIP5 PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 5.0e-82
Identity = 137/218 (62.84%), Postives = 167/218 (76.61%), Query Frame = 1 

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120
           + P+++    +  H +   VTV  H+         + +D          YWIPTP+QIL+
Sbjct: 122 IAPDATTDEQDQDHDRGVEVTVESHLD--------DDDDHHGDLHRGHHYWIPTPSQILI 181

Query: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180
           GPTQF+C +C KTFNRYNNMQMHMWGHGSQYRKGPESLRG++P + MLRLPC+CCA GCK
Sbjct: 182 GPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP-TGMLRLPCFCCAPGCK 241

Query: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240
           NNI+HPR++PLKDFRTLQTHYKRKHG+KPF+CR CGK FAV+GDWRTHEKNCGKLW+C C
Sbjct: 242 NNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSC 301

Query: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDD 279
           GSDFKHKRSLKDHV+AFG+GH P  +     + +D+ D
Sbjct: 302 GSDFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHEDYYD 330

[Close]
BLAST of Cp4.1LG01g17580 vs. Swiss-Prot
Match: ZWIP4_ARATH (Zinc finger protein WIP4 OS=Arabidopsis thaliana GN=WIP4 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 8.5e-82
Identity = 150/260 (57.69%), Postives = 183/260 (70.38%), Query Frame = 1 

Query: 32  DSIFLSLCPPGQRHTVS-SKHRQLQN-------KQNPVTPNSSLQNPNILHHQHAAVTVA 91
           +S FL  C    RH V+   H  L N         + V  ++  Q  +  HHQ   + V 
Sbjct: 161 NSNFLDQCQDSYRHDVTVDLHLGLPNLGDGGSSSSDVVLDSTDHQEGHHDHHQDQGLEVT 220

Query: 92  MHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMH 151
           M     A+    E   +     +   +WIPTP+QIL+GPTQFSC +C KTFNRYNNMQMH
Sbjct: 221 M-----ASDHDDEHGGLQRGNHLH-HFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMH 280

Query: 152 MWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKR 211
           MWGHGSQYRKGPESLRG++P ++ML+LPCYCCA GCKNNI+HPR+RPLKDFRTLQTHYKR
Sbjct: 281 MWGHGSQYRKGPESLRGTQP-TAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKR 340

Query: 212 KHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAP 271
           KHG +PF+CR+CGK FAV+GDWRTHEKNCGKLW+C CGSDFKHKRSLKDHV+AFG+GH P
Sbjct: 341 KHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVP 400

Query: 272 HTVQLCEVEDDDWDDNDDHE 284
                C ++ ++ +   D E
Sbjct: 401 ----CCGIDHEEEEAASDVE 409

[Close]
BLAST of Cp4.1LG01g17580 vs. Swiss-Prot
Match: ZWIP3_ARATH (Zinc finger protein WIP3 OS=Arabidopsis thaliana GN=WIP3 PE=2 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 7.2e-81
Identity = 126/167 (75.45%), Postives = 149/167 (89.22%), Query Frame = 1 

Query: 109 QYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSML 168
           ++WIP+PAQI VGP QF+CS+CSKTFNRYNNMQMHMWGHGS++RKG +SL+G+   +++L
Sbjct: 164 RFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAIL 223

Query: 169 RLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTH 228
           RLPCYCCAEGCKNNI HPRS+PLKDFRTLQTHYKRKHG+KPFSC KCGK  AV+GDWRTH
Sbjct: 224 RLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTH 283

Query: 229 EKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDD 276
           EKNCGKLW+C CGSDFKHKRSLKDH+R+FG GH+PH   L +  ++D
Sbjct: 284 EKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEED 330

[Close]
BLAST of Cp4.1LG01g17580 vs. TrEMBL
Match: A0A0A0KQ06_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G365160 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 1.1e-128
Identity = 235/302 (77.81%), Postives = 252/302 (83.44%), Query Frame = 1 

Query: 2   RSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNPV 61
           +S  L+CISSSESACLEGDEEG       E+SIFLSL PPGQR + SSK +Q       +
Sbjct: 3   QSWKLSCISSSESACLEGDEEG-------EESIFLSLSPPGQRTSFSSKQQQT------I 62

Query: 62  TPNSSLQNPNI--LHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQIL 121
            PNSSLQNPN    H   AAVTVAMHIGPP    A  S+  +A RP+D  YWIPTPAQIL
Sbjct: 63  YPNSSLQNPNNDNNHENGAAVTVAMHIGPPP---ALLSSTPAAVRPLD--YWIPTPAQIL 122

Query: 122 VGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGC 181
           VGPTQFSCSVC+KTFNRYNNMQMHMWGHGS+YRKGPESLRGSK ASSMLR+PCYCCAEGC
Sbjct: 123 VGPTQFSCSVCTKTFNRYNNMQMHMWGHGSEYRKGPESLRGSKAASSMLRVPCYCCAEGC 182

Query: 182 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 241
           KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 183 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKSFAVRGDWRTHEKNCGKLWFCI 242

Query: 242 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVE----DDDWD-DNDDHEHVNGS-QPWSI 296
           CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVE    DDDW+ D+  H+++NGS Q WSI
Sbjct: 243 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDNDDDDWESDHHHHQYLNGSPQTWSI 286

[Close]
BLAST of Cp4.1LG01g17580 vs. TrEMBL
Match: D7T988_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03100 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 4.1e-115
Identity = 207/288 (71.88%), Postives = 235/288 (81.60%), Query Frame = 1 

Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60
           M++ +  CISSSESACLE DEE        EDSI LSLCPPGQ    S+  R + +  + 
Sbjct: 1   MQTPSFACISSSESACLEADEED-------EDSILLSLCPPGQ----STSKRAIYHPSSS 60

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATES-NDVSAARPVDGQYWIPTPAQIL 120
              N   QN N    +   VTVA+HIGPP   A+T + N+++   PV+GQYWIP+PAQIL
Sbjct: 61  KPQN--YQNTN----REDGVTVALHIGPPNACASTSNPNNINGGDPVEGQYWIPSPAQIL 120

Query: 121 VGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGC 180
           VGPTQFSC+VC+KTFNRYNNMQMHMWGHGSQYRKGPESLRG+KPASS+LRLPCYCCA+GC
Sbjct: 121 VGPTQFSCTVCNKTFNRYNNMQMHMWGHGSQYRKGPESLRGTKPASSILRLPCYCCAQGC 180

Query: 181 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 240
           KNNIEHPRS+PLKDFRTLQTHYKRKHGAKPFSCRKCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 181 KNNIEHPRSKPLKDFRTLQTHYKRKHGAKPFSCRKCGKAFAVRGDWRTHEKNCGKLWFCI 240

Query: 241 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNG 288
           CGSDFKHKRSLKDHVRAFGDGHAPH+V++  VE++  DDNDD +H NG
Sbjct: 241 CGSDFKHKRSLKDHVRAFGDGHAPHSVEMYGVEEE--DDNDD-DHGNG 268

[Close]
BLAST of Cp4.1LG01g17580 vs. TrEMBL
Match: A0A067KC11_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18290 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 4.5e-114
Identity = 205/295 (69.49%), Postives = 235/295 (79.66%), Query Frame = 1 

Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60
           M++ +   ISSS S C+E D++        EDS+FLSL PPGQ     SKH    NK   
Sbjct: 1   MQNPSFNYISSSGSVCIEADDQED------EDSLFLSLGPPGQH---ISKHPNSLNK--- 60

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPP-ATAAATESNDVSAARPVDGQYWIPTPAQIL 120
             P +++   N   H++A VTVA+HIGPP AT   T SN    +  V+GQYWIP+PAQIL
Sbjct: 61  --PRNTIDKQNPNSHENA-VTVALHIGPPSATTQTTSSNPNHVSSLVEGQYWIPSPAQIL 120

Query: 121 VGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGC 180
           VGPTQFSCSVC+KTFNRYNNMQMHMWGHGSQYRKGPESLRG+K ASSMLRLPCYCCAEGC
Sbjct: 121 VGPTQFSCSVCNKTFNRYNNMQMHMWGHGSQYRKGPESLRGTKAASSMLRLPCYCCAEGC 180

Query: 181 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 240
           KNNI+HPRSRPLKDFRTLQTHYKRKHGAKPF CRKCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 181 KNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKTFAVRGDWRTHEKNCGKLWFCI 240

Query: 241 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHV---NGSQPW 292
           CGSDFKHKRSLKDHVRAFGDGH PHTV++CEV+D++ D++DD++ +   NG  P+
Sbjct: 241 CGSDFKHKRSLKDHVRAFGDGHTPHTVKICEVDDEEEDEDDDYDDIDDDNGDGPF 280

[Close]
BLAST of Cp4.1LG01g17580 vs. TrEMBL
Match: A0A061EB25_THECC (C2H2-like zinc finger protein OS=Theobroma cacao GN=TCM_011858 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 6.5e-113
Identity = 206/295 (69.83%), Postives = 233/295 (78.98%), Query Frame = 1 

Query: 1   MRSGNLTC--ISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQ 60
           M+S + T   ISS ESAC E D+         EDSI LSL PPGQ   +S     L    
Sbjct: 1   MQSSSFTYNNISSRESACYEADDVED------EDSIILSLGPPGQGQDIS--RYPLSYPA 60

Query: 61  NPVTPNSSLQNPNILHHQHAAVTVAMHIGPPAT-AAATESNDVSAARPVDGQYWIPTPAQ 120
           +   PN     PN      + VTVA+HIGPPA   +++ SND+ + + V+GQYWIP+PAQ
Sbjct: 61  SNKAPNC----PNPTSTDQSGVTVALHIGPPAIETSSSNSNDIRSNKLVEGQYWIPSPAQ 120

Query: 121 ILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAE 180
           ILVGPTQFSC+VC+KTFNRYNNMQMHMWGHGSQYRKGP+SLRG+KPASSMLRLPCYCCAE
Sbjct: 121 ILVGPTQFSCAVCNKTFNRYNNMQMHMWGHGSQYRKGPDSLRGTKPASSMLRLPCYCCAE 180

Query: 181 GCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWF 240
           GCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPF CRKCGKPFAVRGDWRTHEKNCGKLWF
Sbjct: 181 GCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWF 240

Query: 241 CICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEV----EDDDWDDNDDHEHVNGS 289
           CICGSDFKHKRSLKDHVRAFGDGHAPHTV+ CEV    E++D DD++D ++ +GS
Sbjct: 241 CICGSDFKHKRSLKDHVRAFGDGHAPHTVEYCEVEEEEEEEDDDDDNDEDNEDGS 283

[Close]
BLAST of Cp4.1LG01g17580 vs. TrEMBL
Match: A0A0D2VAV4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G080100 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 4.2e-112
Identity = 202/280 (72.14%), Postives = 223/280 (79.64%), Query Frame = 1 

Query: 9   ISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNPVTPNSSLQ 68
           IS  ES+C E D+   G     EDSI LSL PPGQ   +S          +  +   S  
Sbjct: 11  ISPRESSCHEADDHVEG-----EDSIVLSLGPPGQAPRISKYPLTSHPSSSTSSKVPSCP 70

Query: 69  NPNILHHQHAAVTVAMHIGPPATA--AATESNDVSAARPVDGQYWIPTPAQILVGPTQFS 128
           NP       + VTVA+HIGPP T   +++ SND+  +  V+GQYWIP+PAQILVGPTQFS
Sbjct: 71  NPTSTTETESGVTVALHIGPPTTVETSSSNSNDIGNSL-VEGQYWIPSPAQILVGPTQFS 130

Query: 129 CSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEHP 188
           CSVC+KTFNRYNNMQMHMWGHGSQYRKGPESLRG+KPASSMLRLPCYCCAEGCKNNI+HP
Sbjct: 131 CSVCNKTFNRYNNMQMHMWGHGSQYRKGPESLRGTKPASSMLRLPCYCCAEGCKNNIDHP 190

Query: 189 RSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKH 248
           RSRPLKDFRTLQTHYKRKHGAKPF CRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKH
Sbjct: 191 RSRPLKDFRTLQTHYKRKHGAKPFECRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKH 250

Query: 249 KRSLKDHVRAFGDGHAPHTVQLC--EVEDDDWDDNDDHEH 285
           KRSLKDHVRAFGDGHAPHTV+ C  EVEDDD DD DD+++
Sbjct: 251 KRSLKDHVRAFGDGHAPHTVEYCEVEVEDDDNDDVDDNDN 284

[Close]
BLAST of Cp4.1LG01g17580 vs. TAIR10
Match: AT1G13290.1 (AT1G13290.1 C2H2-like zinc finger protein)

HSP 1 Score: 359.0 bits (920), Expect = 2.8e-99
Identity = 177/260 (68.08%), Postives = 202/260 (77.69%), Query Frame = 1 

Query: 29  GGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNPVTPNSSLQNPNILHHQHAAVTVAMHIGP 88
           G EDS+ LSL PPGQ++   +K    +   +    N  L NPN        VTVA+HIGP
Sbjct: 11  GDEDSVVLSLGPPGQQYPSHNKPTSTKPSSDHEF-NHPLTNPN-------GVTVALHIGP 70

Query: 89  PATAAATES--NDVSAARPVDGQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWG 148
           P++   T S  N+        GQYWIP+ +QILVGPTQFSCSVC+KTFNR+NNMQMHMWG
Sbjct: 71  PSSDKETLSGGNNQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWG 130

Query: 149 HGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHG 208
           HGSQYRKGPESLRG+K +SS+LRLPCYCCAEGCKNNI+HPRS+PLKDFRTLQTHYKRKHG
Sbjct: 131 HGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHG 190

Query: 209 AKPFSCR-KCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHT 268
           AKPF CR KC K FAVRGDWRTHEKNCGKLWFC+CGSDFKHKRSLKDHVRAFGDGHA HT
Sbjct: 191 AKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHT 250

Query: 269 V--QLCEVEDDDWDDNDDHE 284
           V  ++  + D D DD ++ E
Sbjct: 251 VSDRVVGIGDADEDDEEEEE 262

[Close]
BLAST of Cp4.1LG01g17580 vs. TAIR10
Match: AT3G57670.1 (AT3G57670.1 C2H2-type zinc finger family protein)

HSP 1 Score: 316.6 bits (810), Expect = 1.6e-86
Identity = 138/180 (76.67%), Postives = 158/180 (87.78%), Query Frame = 1 

Query: 108 GQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSM 167
           GQYWIPTP+QIL+GPTQFSC VC KTFNRYNNMQMHMWGHGSQYRKGPESLRG++P + M
Sbjct: 200 GQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP-TGM 259

Query: 168 LRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRT 227
           LRLPCYCCA GC+NNI+HPR++PLKDFRTLQTHYKRKHG KPF CRKCGK FAVRGDWRT
Sbjct: 260 LRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRT 319

Query: 228 HEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDD----NDDHE 284
           HEKNCGKLW+CICGSDFKHKRSLKDH++AFG+GH  + +   + ED+   +    ++DHE
Sbjct: 320 HEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGIDGFDEEDEPASEVEQLDNDHE 378

[Close]
BLAST of Cp4.1LG01g17580 vs. TAIR10
Match: AT1G51220.1 (AT1G51220.1 WIP domain protein 5)

HSP 1 Score: 305.8 bits (782), Expect = 2.8e-83
Identity = 137/218 (62.84%), Postives = 167/218 (76.61%), Query Frame = 1 

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120
           + P+++    +  H +   VTV  H+         + +D          YWIPTP+QIL+
Sbjct: 122 IAPDATTDEQDQDHDRGVEVTVESHLD--------DDDDHHGDLHRGHHYWIPTPSQILI 181

Query: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180
           GPTQF+C +C KTFNRYNNMQMHMWGHGSQYRKGPESLRG++P + MLRLPC+CCA GCK
Sbjct: 182 GPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP-TGMLRLPCFCCAPGCK 241

Query: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240
           NNI+HPR++PLKDFRTLQTHYKRKHG+KPF+CR CGK FAV+GDWRTHEKNCGKLW+C C
Sbjct: 242 NNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSC 301

Query: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDD 279
           GSDFKHKRSLKDHV+AFG+GH P  +     + +D+ D
Sbjct: 302 GSDFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHEDYYD 330

[Close]
BLAST of Cp4.1LG01g17580 vs. TAIR10
Match: AT3G20880.1 (AT3G20880.1 WIP domain protein 4)

HSP 1 Score: 305.1 bits (780), Expect = 4.8e-83
Identity = 150/260 (57.69%), Postives = 183/260 (70.38%), Query Frame = 1 

Query: 32  DSIFLSLCPPGQRHTVS-SKHRQLQN-------KQNPVTPNSSLQNPNILHHQHAAVTVA 91
           +S FL  C    RH V+   H  L N         + V  ++  Q  +  HHQ   + V 
Sbjct: 161 NSNFLDQCQDSYRHDVTVDLHLGLPNLGDGGSSSSDVVLDSTDHQEGHHDHHQDQGLEVT 220

Query: 92  MHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMH 151
           M     A+    E   +     +   +WIPTP+QIL+GPTQFSC +C KTFNRYNNMQMH
Sbjct: 221 M-----ASDHDDEHGGLQRGNHLH-HFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMH 280

Query: 152 MWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKR 211
           MWGHGSQYRKGPESLRG++P ++ML+LPCYCCA GCKNNI+HPR+RPLKDFRTLQTHYKR
Sbjct: 281 MWGHGSQYRKGPESLRGTQP-TAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKR 340

Query: 212 KHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAP 271
           KHG +PF+CR+CGK FAV+GDWRTHEKNCGKLW+C CGSDFKHKRSLKDHV+AFG+GH P
Sbjct: 341 KHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVP 400

Query: 272 HTVQLCEVEDDDWDDNDDHE 284
                C ++ ++ +   D E
Sbjct: 401 ----CCGIDHEEEEAASDVE 409

[Close]
BLAST of Cp4.1LG01g17580 vs. TAIR10
Match: AT1G08290.1 (AT1G08290.1 WIP domain protein 3)

HSP 1 Score: 302.0 bits (772), Expect = 4.1e-82
Identity = 126/167 (75.45%), Postives = 149/167 (89.22%), Query Frame = 1 

Query: 109 QYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSML 168
           ++WIP+PAQI VGP QF+CS+CSKTFNRYNNMQMHMWGHGS++RKG +SL+G+   +++L
Sbjct: 164 RFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAIL 223

Query: 169 RLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTH 228
           RLPCYCCAEGCKNNI HPRS+PLKDFRTLQTHYKRKHG+KPFSC KCGK  AV+GDWRTH
Sbjct: 224 RLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTH 283

Query: 229 EKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDD 276
           EKNCGKLW+C CGSDFKHKRSLKDH+R+FG GH+PH   L +  ++D
Sbjct: 284 EKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEED 330

[Close]
BLAST of Cp4.1LG01g17580 vs. NCBI nr
Match: gi|659131749|ref|XP_008465836.1| (PREDICTED: protein TRANSPARENT TESTA 1-like [Cucumis melo])

HSP 1 Score: 470.7 bits (1210), Expect = 1.9e-129
Identity = 236/305 (77.38%), Postives = 255/305 (83.61%), Query Frame = 1 

Query: 2   RSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNPV 61
           +S  L+CISSSESACLEGDEEG       E+SIFLSL PPGQR++ SSK +Q       +
Sbjct: 3   QSRKLSCISSSESACLEGDEEG-------EESIFLSLSPPGQRNSFSSKQQQT------I 62

Query: 62  TPNSSLQNPNILHHQH-----AAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPA 121
            PNSSLQNPN  ++ H     AAVTVAMHIGPP    A  S+  SA RP+D  YWIPTPA
Sbjct: 63  YPNSSLQNPNNNNNNHHHENGAAVTVAMHIGPPP---ALISSAPSAVRPLD--YWIPTPA 122

Query: 122 QILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCA 181
           QILVGPTQFSCSVC+KTFNRYNNMQMHMWGHGS+YRKGPESLRGSK ASSMLR+PCYCCA
Sbjct: 123 QILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSEYRKGPESLRGSKAASSMLRVPCYCCA 182

Query: 182 EGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLW 241
           EGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGK FAVRGDWRTHEKNCGKLW
Sbjct: 183 EGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKSFAVRGDWRTHEKNCGKLW 242

Query: 242 FCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVE----DDDWD-DNDDHEHVNGS-QP 296
           FCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVE    DD+W+ D+  H+H+NGS Q 
Sbjct: 243 FCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDNDDDEWESDHHHHQHLNGSPQT 289

[Close]
BLAST of Cp4.1LG01g17580 vs. NCBI nr
Match: gi|449445258|ref|XP_004140390.1| (PREDICTED: zinc finger protein WIP6 [Cucumis sativus])

HSP 1 Score: 467.6 bits (1202), Expect = 1.6e-128
Identity = 235/302 (77.81%), Postives = 252/302 (83.44%), Query Frame = 1 

Query: 2   RSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNPV 61
           +S  L+CISSSESACLEGDEEG       E+SIFLSL PPGQR + SSK +Q       +
Sbjct: 3   QSWKLSCISSSESACLEGDEEG-------EESIFLSLSPPGQRTSFSSKQQQT------I 62

Query: 62  TPNSSLQNPNI--LHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQIL 121
            PNSSLQNPN    H   AAVTVAMHIGPP    A  S+  +A RP+D  YWIPTPAQIL
Sbjct: 63  YPNSSLQNPNNDNNHENGAAVTVAMHIGPPP---ALLSSTPAAVRPLD--YWIPTPAQIL 122

Query: 122 VGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGC 181
           VGPTQFSCSVC+KTFNRYNNMQMHMWGHGS+YRKGPESLRGSK ASSMLR+PCYCCAEGC
Sbjct: 123 VGPTQFSCSVCTKTFNRYNNMQMHMWGHGSEYRKGPESLRGSKAASSMLRVPCYCCAEGC 182

Query: 182 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 241
           KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 183 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKSFAVRGDWRTHEKNCGKLWFCI 242

Query: 242 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVE----DDDWD-DNDDHEHVNGS-QPWSI 296
           CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVE    DDDW+ D+  H+++NGS Q WSI
Sbjct: 243 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDNDDDDWESDHHHHQYLNGSPQTWSI 286

[Close]
BLAST of Cp4.1LG01g17580 vs. NCBI nr
Match: gi|731370587|ref|XP_010647907.1| (PREDICTED: zinc finger protein WIP6 [Vitis vinifera])

HSP 1 Score: 422.5 bits (1085), Expect = 5.9e-115
Identity = 207/288 (71.88%), Postives = 235/288 (81.60%), Query Frame = 1 

Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60
           M++ +  CISSSESACLE DEE        EDSI LSLCPPGQ    S+  R + +  + 
Sbjct: 1   MQTPSFACISSSESACLEADEED-------EDSILLSLCPPGQ----STSKRAIYHPSSS 60

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATES-NDVSAARPVDGQYWIPTPAQIL 120
              N   QN N    +   VTVA+HIGPP   A+T + N+++   PV+GQYWIP+PAQIL
Sbjct: 61  KPQN--YQNTN----REDGVTVALHIGPPNACASTSNPNNINGGDPVEGQYWIPSPAQIL 120

Query: 121 VGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGC 180
           VGPTQFSC+VC+KTFNRYNNMQMHMWGHGSQYRKGPESLRG+KPASS+LRLPCYCCA+GC
Sbjct: 121 VGPTQFSCTVCNKTFNRYNNMQMHMWGHGSQYRKGPESLRGTKPASSILRLPCYCCAQGC 180

Query: 181 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 240
           KNNIEHPRS+PLKDFRTLQTHYKRKHGAKPFSCRKCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 181 KNNIEHPRSKPLKDFRTLQTHYKRKHGAKPFSCRKCGKAFAVRGDWRTHEKNCGKLWFCI 240

Query: 241 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNG 288
           CGSDFKHKRSLKDHVRAFGDGHAPH+V++  VE++  DDNDD +H NG
Sbjct: 241 CGSDFKHKRSLKDHVRAFGDGHAPHSVEMYGVEEE--DDNDD-DHGNG 268

[Close]
BLAST of Cp4.1LG01g17580 vs. NCBI nr
Match: gi|802680882|ref|XP_012082035.1| (PREDICTED: zinc finger protein WIP6 [Jatropha curcas])

HSP 1 Score: 419.1 bits (1076), Expect = 6.5e-114
Identity = 205/295 (69.49%), Postives = 235/295 (79.66%), Query Frame = 1 

Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60
           M++ +   ISSS S C+E D++        EDS+FLSL PPGQ     SKH    NK   
Sbjct: 1   MQNPSFNYISSSGSVCIEADDQED------EDSLFLSLGPPGQH---ISKHPNSLNK--- 60

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPP-ATAAATESNDVSAARPVDGQYWIPTPAQIL 120
             P +++   N   H++A VTVA+HIGPP AT   T SN    +  V+GQYWIP+PAQIL
Sbjct: 61  --PRNTIDKQNPNSHENA-VTVALHIGPPSATTQTTSSNPNHVSSLVEGQYWIPSPAQIL 120

Query: 121 VGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGC 180
           VGPTQFSCSVC+KTFNRYNNMQMHMWGHGSQYRKGPESLRG+K ASSMLRLPCYCCAEGC
Sbjct: 121 VGPTQFSCSVCNKTFNRYNNMQMHMWGHGSQYRKGPESLRGTKAASSMLRLPCYCCAEGC 180

Query: 181 KNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCI 240
           KNNI+HPRSRPLKDFRTLQTHYKRKHGAKPF CRKCGK FAVRGDWRTHEKNCGKLWFCI
Sbjct: 181 KNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKTFAVRGDWRTHEKNCGKLWFCI 240

Query: 241 CGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHV---NGSQPW 292
           CGSDFKHKRSLKDHVRAFGDGH PHTV++CEV+D++ D++DD++ +   NG  P+
Sbjct: 241 CGSDFKHKRSLKDHVRAFGDGHTPHTVKICEVDDEEEDEDDDYDDIDDDNGDGPF 280

[Close]
BLAST of Cp4.1LG01g17580 vs. NCBI nr
Match: gi|1009155335|ref|XP_015895657.1| (PREDICTED: zinc finger protein WIP6 [Ziziphus jujuba])

HSP 1 Score: 418.7 bits (1075), Expect = 8.5e-114
Identity = 205/304 (67.43%), Postives = 236/304 (77.63%), Query Frame = 1 

Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQR----------HTVSSK 60
           M++ + TCISSSESACLE DEE        E+SIFLSL PPGQ           H+ S++
Sbjct: 1   MQTLSFTCISSSESACLEADEED-------EESIFLSLGPPGQHIHKHYPIYHHHSSSTR 60

Query: 61  ----HRQLQNKQNPVTPNSSLQNPNILHHQHAAVTVAMHIGPPAT-------AAATESND 120
               H   QN  +   PN+S        HQ   VT+A+ IG P         +++  ++ 
Sbjct: 61  SDHHHHHHQNHHHNQNPNNSTD------HQDHGVTIALRIGAPPVISTRPRGSSSNPNHH 120

Query: 121 VSAARPVDGQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLR 180
           +SA  P++GQYWIP+PAQILVGPTQFSCSVC+KTFNRYNNMQMHMWGHGSQYRKGPESLR
Sbjct: 121 ISA--PIEGQYWIPSPAQILVGPTQFSCSVCNKTFNRYNNMQMHMWGHGSQYRKGPESLR 180

Query: 181 GSKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPF 240
           G+KPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPF CRKCGKPF
Sbjct: 181 GTKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPF 240

Query: 241 AVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDN 284
           AVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPH V+LCEVE+++ ++ 
Sbjct: 241 AVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHAVELCEVEEEEEEEE 289

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g17580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZWIP6_ARATH5.0e-9868.08Zinc finger protein WIP6 OS=Arabidopsis thaliana GN=WIP6 PE=2 SV=1[more]
ZWIP2_ARATH2.8e-8576.67Zinc finger protein WIP2 OS=Arabidopsis thaliana GN=WIP2 PE=1 SV=1[more]
ZWIP5_ARATH5.0e-8262.84Zinc finger protein WIP5 OS=Arabidopsis thaliana GN=WIP5 PE=2 SV=1[more]
ZWIP4_ARATH8.5e-8257.69Zinc finger protein WIP4 OS=Arabidopsis thaliana GN=WIP4 PE=2 SV=1[more]
ZWIP3_ARATH7.2e-8175.45Zinc finger protein WIP3 OS=Arabidopsis thaliana GN=WIP3 PE=2 SV=1[more]
BLAST of Cp4.1LG01g17580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQ06_CUCSA1.1e-12877.81Uncharacterized protein OS=Cucumis sativus GN=Csa_5G365160 PE=4 SV=1[more]
D7T988_VITVI4.1e-11571.88Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03100 PE=4 SV=... [more]
A0A067KC11_JATCU4.5e-11469.49Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18290 PE=4 SV=1[more]
A0A061EB25_THECC6.5e-11369.83C2H2-like zinc finger protein OS=Theobroma cacao GN=TCM_011858 PE=4 SV=1[more]
A0A0D2VAV4_GOSRA4.2e-11272.14Uncharacterized protein OS=Gossypium raimondii GN=B456_013G080100 PE=4 SV=1[more]
BLAST of Cp4.1LG01g17580 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13290.12.8e-9968.08 C2H2-like zinc finger protein[more]
AT3G57670.11.6e-8676.67 C2H2-type zinc finger family protein[more]
AT1G51220.12.8e-8362.84 WIP domain protein 5[more]
AT3G20880.14.8e-8357.69 WIP domain protein 4[more]
AT1G08290.14.1e-8275.45 WIP domain protein 3[more]
BLAST of Cp4.1LG01g17580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131749|ref|XP_008465836.1|1.9e-12977.38PREDICTED: protein TRANSPARENT TESTA 1-like [Cucumis melo][more]
gi|449445258|ref|XP_004140390.1|1.6e-12877.81PREDICTED: zinc finger protein WIP6 [Cucumis sativus][more]
gi|731370587|ref|XP_010647907.1|5.9e-11571.88PREDICTED: zinc finger protein WIP6 [Vitis vinifera][more]
gi|802680882|ref|XP_012082035.1|6.5e-11469.49PREDICTED: zinc finger protein WIP6 [Jatropha curcas][more]
gi|1009155335|ref|XP_015895657.1|8.5e-11467.43PREDICTED: zinc finger protein WIP6 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR015880Zinc finger, C2H2-like
IPR013087Znf_C2H2_type
IPR007087Zinc finger, C2H2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010588 cotyledon vascular tissue pattern formation
biological_process GO:0010305 leaf vascular tissue pattern formation
biological_process GO:0010087 phloem or xylem histogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048364 root development
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17580.1Cp4.1LG01g17580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 127..147
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 125..152
score: 10
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 125..144
score: 1.6E-5coord: 196..230
score: 3.
IPR015880Zinc finger, C2H2-likeSMARTSM00355c2h2final6coord: 125..147
score: 0.15coord: 173..205
score: 220.0coord: 210..230
score:
NoneNo IPR availablePANTHERPTHR10593SERINE/THREONINE-PROTEIN KINASE RIOcoord: 126..263
score: 1.0
NoneNo IPR availablePANTHERPTHR10593:SF27SUBFAMILY NOT NAMEDcoord: 126..263
score: 1.0
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 121..147
score: 2.57E-5coord: 193..230
score: 6.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g17580CmaCh04G020130Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g17580CmoCh04G021000Cucurbita moschata (Rifu)cmocpeB685
Cp4.1LG01g17580Csa5G365160Cucumber (Chinese Long) v2cpecuB436
Cp4.1LG01g17580MELO3C003009Melon (DHL92) v3.5.1cpemeB352
Cp4.1LG01g17580CSPI05G13930Wild cucumber (PI 183967)cpecpiB435
Cp4.1LG01g17580Lsi09G010270Bottle gourd (USVL1VR-Ls)cpelsiB313
Cp4.1LG01g17580MELO3C003009.2Melon (DHL92) v3.6.1cpemedB413
Cp4.1LG01g17580CsaV3_5G023030Cucumber (Chinese Long) v3cpecucB0530
Cp4.1LG01g17580CsGy5G013980Cucumber (Gy14) v2cgybcpeB639
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g17580Melon (DHL92) v3.6.1cpemedB448
Cp4.1LG01g17580Silver-seed gourdcarcpeB1450
Cp4.1LG01g17580Cucumber (Chinese Long) v3cpecucB0535
Cp4.1LG01g17580Wax gourdcpewgoB0574
Cp4.1LG01g17580Cucurbita pepo (Zucchini)cpecpeB037
Cp4.1LG01g17580Cucumber (Gy14) v1cgycpeB0757
Cp4.1LG01g17580Cucurbita maxima (Rimu)cmacpeB436
Cp4.1LG01g17580Cucurbita moschata (Rifu)cmocpeB286
Cp4.1LG01g17580Cucurbita moschata (Rifu)cmocpeB400
Cp4.1LG01g17580Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g17580Cucurbita moschata (Rifu)cmocpeB680
Cp4.1LG01g17580Cucurbita moschata (Rifu)cmocpeB682
Cp4.1LG01g17580Wild cucumber (PI 183967)cpecpiB429
Cp4.1LG01g17580Cucumber (Chinese Long) v2cpecuB434
Cp4.1LG01g17580Watermelon (Charleston Gray)cpewcgB381
Cp4.1LG01g17580Watermelon (Charleston Gray)cpewcgB400
Cp4.1LG01g17580Watermelon (97103) v1cpewmB401
Cp4.1LG01g17580Watermelon (97103) v1cpewmB439
Cp4.1LG01g17580Melon (DHL92) v3.5.1cpemeB387
Cp4.1LG01g17580Cucumber (Gy14) v2cgybcpeB640