Cp4.1LG01g17420 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g17420
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionNADH-ubiquinone oxidoreductase B18 subunit, putative
LocationCp4.1LG01 : 12417413 .. 12417915 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTCCAGGGATCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTGGAGGCTAGGGTTCCAATTCCTTATAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAGTGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAAACGAGCGCCATTCCTACGAGAAATGTGAATATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAATTCAAGAAGGGTATTCCTCTCATTCCCAAGACTGCCAATGTATGACGTCATTCCTTAATCAGGTTCGTTTCTCTTGCTCTCTAATCTTCTTAAACGTTATCGATTCTATTGATTTCTTGTTATTTTTACCGTGTCATCGATTTCTCATGATCTTGGTTCGAATGTTCAAAGTTCTATGTTTTCTTTTTCTCCTTTCATATTAGGGCTATGATCTTTCTGAGCTGACACCGGATCGTGGATTGACCCCTATAGCATGA

mRNA sequence

ATGGAAGTCCAGGGATCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTGGAGGCTAGGGTTCCAATTCCTTATAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAGTGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAAACGAGCGCCATTCCTACGAGAAATGTGAATATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAATTCAAGAAGGGTATTCCTCTCATTCCCAAGACTGCCAATGGCTATGATCTTTCTGAGCTGACACCGGATCGTGGATTGACCCCTATAGCATGA

Coding sequence (CDS)

ATGGAAGTCCAGGGATCCTCGAAGAAGATGATAGCGACGCAGGCTGAGATGGTGGAGGCTAGGGTTCCAATTCCTTATAGAGACCAGTGCGCTCACTTGTTGATCCCTCTTAATAAGTGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAAACGAGCGCCATTCCTACGAGAAATGTGAATATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAGAAGATCCGTGAGGAGGAGGCCAAATTCAAGAAGGGTATTCCTCTCATTCCCAAGACTGCCAATGGCTATGATCTTTCTGAGCTGACACCGGATCGTGGATTGACCCCTATAGCATGA

Protein sequence

MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREEEAKFKKGIPLIPKTANGYDLSELTPDRGLTPIA
Homology
[Close]
BLAST of Cp4.1LG01g17420 vs. Swiss-Prot
Match: NDUB7_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thaliana GN=At2g02050 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-34
Identity = 74/102 (72.55%), Postives = 82/102 (80.39%), Query Frame = 1 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EM  A++ +  RD CAHLLIPLNKCRQ+EFYLPWKCE+ERH YEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKK-------GIPLIPKTAN 96
           CEYELVMERML M+KIREEEA  K+        +PLIPKTAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102

[Close]
BLAST of Cp4.1LG01g17420 vs. Swiss-Prot
Match: NDUB7_DICDI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Dictyostelium discoideum GN=ndufb7 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-15
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 1 

Query: 7  SKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELV 66
          S+KMIATQ +  +  +P+ +RD CAHLLIPLN CR S +Y PWKC +E+H+YE C+Y+  
Sbjct: 15 SRKMIATQQQCEDKNLPLSFRDYCAHLLIPLNDCRVSTYYAPWKCMDEKHAYEGCQYDEY 74

Query: 67 MERMLQMQKIREEEAKFKKGIPLIPK 93
          + R  +++K  ++EA+  K   +I K
Sbjct: 75 LYR--KIKKSEQDEAERIKREVVIEK 98

[Close]
BLAST of Cp4.1LG01g17420 vs. Swiss-Prot
Match: NDUB7_PANTR (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-08
Identity = 32/97 (32.99%), Postives = 54/97 (55.67%), Query Frame = 1 

Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELVM 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+   +
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFXACKQERHDWDYCEHRDYV 96

Query: 68  ERMLQMQKIREEEAKFKKGIPLIPKTANGYDLSELTP 105
            RM + ++ R    + K+      + A G    E+ P
Sbjct: 97  MRMKEFERERRLLQRKKRREKKAAELAKGQGPGEVDP 133

[Close]
BLAST of Cp4.1LG01g17420 vs. Swiss-Prot
Match: NDUB7_GORGO (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla gorilla GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-08
Identity = 32/97 (32.99%), Postives = 54/97 (55.67%), Query Frame = 1 

Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELVM 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+   +
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYV 96

Query: 68  ERMLQMQKIREEEAKFKKGIPLIPKTANGYDLSELTP 105
            RM + ++ R    + K+      + A G    E+ P
Sbjct: 97  MRMKEFERERRLLQRKKRREKKAAELAKGQGPGEVDP 133

[Close]
BLAST of Cp4.1LG01g17420 vs. Swiss-Prot
Match: NDUB7_PONPY (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-08
Identity = 32/97 (32.99%), Postives = 54/97 (55.67%), Query Frame = 1 

Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYELVM 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+   +
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYV 96

Query: 68  ERMLQMQKIREEEAKFKKGIPLIPKTANGYDLSELTP 105
            RM + ++ R    + K+      + A G    E+ P
Sbjct: 97  MRMKEFERERRLLQRKKRREKKAAELAKGQGPGEVDP 133

[Close]
BLAST of Cp4.1LG01g17420 vs. TrEMBL
Match: A0A0A0KMK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G277970 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.4e-44
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 1 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK KKGI LIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 95

[Close]
BLAST of Cp4.1LG01g17420 vs. TrEMBL
Match: A0A067EXL1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034138mg PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.1e-41
Identity = 89/102 (87.25%), Postives = 91/102 (89.22%), Query Frame = 1 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EMVEARVPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCENERHSYEK
Sbjct: 1   MEVPGSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKKG-------IPLIPKTAN 96
           CEYELVMERMLQMQKIREEEAK K+        IPLIPKTAN
Sbjct: 61  CEYELVMERMLQMQKIREEEAKLKQSQTQKGAPIPLIPKTAN 102

[Close]
BLAST of Cp4.1LG01g17420 vs. TrEMBL
Match: V4UAW1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017277mg PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.1e-41
Identity = 89/102 (87.25%), Postives = 91/102 (89.22%), Query Frame = 1 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EMVEARVPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCENERHSYEK
Sbjct: 1   MEVPGSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKKG-------IPLIPKTAN 96
           CEYELVMERMLQMQKIREEEAK K+        IPLIPKTAN
Sbjct: 61  CEYELVMERMLQMQKIREEEAKLKQSQTQKGAPIPLIPKTAN 102

[Close]
BLAST of Cp4.1LG01g17420 vs. TrEMBL
Match: A0A067KTF2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04846 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.1e-41
Identity = 88/101 (87.13%), Postives = 92/101 (91.09%), Query Frame = 1 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEVQGSSK MIATQAEMVEA+VPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCENERHSYEK
Sbjct: 1   MEVQGSSKPMIATQAEMVEAKVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKK------GIPLIPKTAN 96
           CEYEL+MERMLQMQKIREEEAK K+       IPLIPKTAN
Sbjct: 61  CEYELLMERMLQMQKIREEEAKLKQAQKQGGSIPLIPKTAN 101

[Close]
BLAST of Cp4.1LG01g17420 vs. TrEMBL
Match: A0A0D2NDD0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G154900 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.6e-40
Identity = 86/101 (85.15%), Postives = 91/101 (90.10%), Query Frame = 1 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV+GSSKKMIATQAEMVE +VPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCE ERHSYEK
Sbjct: 1   MEVEGSSKKMIATQAEMVENKVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCEIERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKK------GIPLIPKTAN 96
           CEYELVMERMLQMQKIREEEAK K+       +PLIPKTAN
Sbjct: 61  CEYELVMERMLQMQKIREEEAKLKQAGKQGVSVPLIPKTAN 101

[Close]
BLAST of Cp4.1LG01g17420 vs. TAIR10
Match: AT2G02050.1 (AT2G02050.1 NADH-ubiquinone oxidoreductase B18 subunit, putative)

HSP 1 Score: 146.4 bits (368), Expect = 1.1e-35
Identity = 74/102 (72.55%), Postives = 82/102 (80.39%), Query Frame = 1 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EM  A++ +  RD CAHLLIPLNKCRQ+EFYLPWKCE+ERH YEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKK-------GIPLIPKTAN 96
           CEYELVMERML M+KIREEEA  K+        +PLIPKTAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102

[Close]
BLAST of Cp4.1LG01g17420 vs. NCBI nr
Match: gi|449445264|ref|XP_004140393.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-44
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 1 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK KKGI LIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 95

[Close]
BLAST of Cp4.1LG01g17420 vs. NCBI nr
Match: gi|659120462|ref|XP_008460206.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
          ME QGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEFQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK K+GI LIPK AN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKEGIHLIPKPAN 95

[Close]
BLAST of Cp4.1LG01g17420 vs. NCBI nr
Match: gi|802597738|ref|XP_012072408.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 177.2 bits (448), Expect = 1.6e-41
Identity = 88/101 (87.13%), Postives = 92/101 (91.09%), Query Frame = 1 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEVQGSSK MIATQAEMVEA+VPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCENERHSYEK
Sbjct: 1   MEVQGSSKPMIATQAEMVEAKVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKK------GIPLIPKTAN 96
           CEYEL+MERMLQMQKIREEEAK K+       IPLIPKTAN
Sbjct: 61  CEYELLMERMLQMQKIREEEAKLKQAQKQGGSIPLIPKTAN 101

[Close]
BLAST of Cp4.1LG01g17420 vs. NCBI nr
Match: gi|567911451|ref|XP_006448039.1| (hypothetical protein CICLE_v10017277mg [Citrus clementina])

HSP 1 Score: 177.2 bits (448), Expect = 1.6e-41
Identity = 89/102 (87.25%), Postives = 91/102 (89.22%), Query Frame = 1 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV GSSKKMIATQ EMVEARVPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCENERHSYEK
Sbjct: 1   MEVPGSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKKG-------IPLIPKTAN 96
           CEYELVMERMLQMQKIREEEAK K+        IPLIPKTAN
Sbjct: 61  CEYELVMERMLQMQKIREEEAKLKQSQTQKGAPIPLIPKTAN 102

[Close]
BLAST of Cp4.1LG01g17420 vs. NCBI nr
Match: gi|823158129|ref|XP_012478939.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-40
Identity = 86/101 (85.15%), Postives = 91/101 (90.10%), Query Frame = 1 

Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60
           MEV+GSSKKMIATQAEMVE +VPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCE ERHSYEK
Sbjct: 1   MEVEGSSKKMIATQAEMVENKVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCEIERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEEAKFKK------GIPLIPKTAN 96
           CEYELVMERMLQMQKIREEEAK K+       +PLIPKTAN
Sbjct: 61  CEYELVMERMLQMQKIREEEAKLKQAGKQGVSVPLIPKTAN 101

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g17420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NDUB7_ARATH1.9e-3472.55NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thali... [more]
NDUB7_DICDI1.2e-1546.51NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Dictyostelium dis... [more]
NDUB7_PANTR1.4e-0832.99NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes G... [more]
NDUB7_GORGO1.8e-0832.99NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla g... [more]
NDUB7_PONPY1.8e-0832.99NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus GN... [more]
BLAST of Cp4.1LG01g17420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMK8_CUCSA1.4e-4495.79Uncharacterized protein OS=Cucumis sativus GN=Csa_5G277970 PE=4 SV=1[more]
A0A067EXL1_CITSI1.1e-4187.25Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034138mg PE=4 SV=1[more]
V4UAW1_9ROSI1.1e-4187.25Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017277mg PE=4 SV=1[more]
A0A067KTF2_JATCU1.1e-4187.13Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04846 PE=4 SV=1[more]
A0A0D2NDD0_GOSRA1.6e-4085.15Uncharacterized protein OS=Gossypium raimondii GN=B456_005G154900 PE=4 SV=1[more]
BLAST of Cp4.1LG01g17420 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G02050.11.1e-3572.55 NADH-ubiquinone oxidoreductase B18 subunit, putative[more]
BLAST of Cp4.1LG01g17420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445264|ref|XP_004140393.1|2.1e-4495.79PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|659120462|ref|XP_008460206.1|1.1e-4292.63PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|802597738|ref|XP_012072408.1|1.6e-4187.13PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|567911451|ref|XP_006448039.1|1.6e-4187.25hypothetical protein CICLE_v10017277mg [Citrus clementina][more]
gi|823158129|ref|XP_012478939.1|2.4e-4085.15PREDICTED: NADH dehydrogenase [ubiquinone][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO:0003954NADH dehydrogenase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR008698NADH_UbQ_OxRdtase_B18_su
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0015992 proton transport
biological_process GO:0006814 sodium ion transport
biological_process GO:0006744 ubiquinone biosynthetic process
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005739 mitochondrion
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0003954 NADH dehydrogenase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17420.1Cp4.1LG01g17420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008698NADH:ubiquinone oxidoreductase, B18 subunitPANTHERPTHR20900NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNITcoord: 1..104
score: 1.1
IPR008698NADH:ubiquinone oxidoreductase, B18 subunitPFAMPF05676NDUF_B7coord: 11..73
score: 9.1
NoneNo IPR availablePANTHERPTHR20900:SF0NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 7coord: 1..104
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g17420Wax gourdcpewgoB0540
Cp4.1LG01g17420Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g17420Cucurbita maxima (Rimu)cmacpeB725
Cp4.1LG01g17420Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g17420Cucurbita moschata (Rifu)cmocpeB677
Cp4.1LG01g17420Cucurbita moschata (Rifu)cmocpeB680
Cp4.1LG01g17420Cucurbita moschata (Rifu)cmocpeB682
Cp4.1LG01g17420Cucurbita moschata (Rifu)cmocpeB686
Cp4.1LG01g17420Wild cucumber (PI 183967)cpecpiB453
Cp4.1LG01g17420Cucumber (Chinese Long) v2cpecuB448
Cp4.1LG01g17420Bottle gourd (USVL1VR-Ls)cpelsiB321
Cp4.1LG01g17420Melon (DHL92) v3.5.1cpemeB371
Cp4.1LG01g17420Melon (DHL92) v3.6.1cpemedB429