Cp4.1LG01g17410 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g17410
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	MYB transcription factor-like
Location	Cp4.1LG01 : 12348457 .. 12350287 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAGCAGTTGGGAGTATATTTAGATGTAATGATTTGAAAGCAAAAGATTTAAAAGAAAAGGCAACAAAAAATTCAGAAAAAAAATGTGTCCCCAATTTCATTTTGATTTTGGTGAATGGTAATGATACATGTATTTGTTGTTTGTTCAACAGTGACAGTCCGCAGAGAAGGCAGTAGCAGAGGAAGCAGCAGAAGCAGCAGCAGCAGCACCAGCAGCTCTCTTTAAGGAATTTTCAGACTCCCCCTTCGTATTTTCCCTTTCTCGTGATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCCCCTCCCTTTGAATCTGTATATAAACCCTTTTCCTTCTTGTTTTCCCCTCCCCACCCCCCACAGGAATTTAGGCATTAGATTCAGAGAGATGAGTAGAAATGGAAGTGTGCGACAGTATATAAGATCCAAAGTCCCTAGATTGAGATGGACTCCCGAGCTTCACCACTGCTTTGTTCTTGCAATTCAAACACTTGGTGGCCATCACAGTATGCCCTTTTCCCTTTCCTTTTCATTTTACTTCCTGCTCGGCTCTGCTCTGCTCTGCTCTGCTCTGCTCACCTTTTGAATGCCTTGTTCTTTCTTTGGTTGATTCATTAGAGGCAACGCCAAAGCTGGTTCTTCAGCTCATGGATGTGAAAGGACTCACCATTTCACACGTAAAGAGCCATCTTCAGGTCTTCTTTTCCACCTTTTCATTATTCCTCTTCTTCTTTTTCCTTTTTCCTTTTTCTATTCTCATTTTTTGTTTATTTGTAACAGATGTATAGAAGCACCAGGGCAGATATGGGAAGACAAGGTTCATTATTTTATATTATAATTCTCCCCAATTGGAACACTGCCAAATCTCTGGAATCTCATTGTGTTTTTCTTTGTTTTGTTATAGATCATAAGTGTTCGAGTGTTGGAAGAAAGGTAAGTAATTTGGAGGAGGAAGACGAGGACGGGTGTGTAGAAGAAGAAAACGTAAAGGGAGGTGGAGTCATTTACAGATCAACAACAACAACAACAACTCGAACTTCAGCTTCCAAAAGGTGTGCCTTGCCTATAATAATAATAATAATAATAATAATAATAAATACACAACAACAAACATTTGTGTCTTGTGTTGTGTTTTGTGTTTGATTGTTTGGTGGTGTTATCAGAGGGAATAGAAGCTCAAGAAATGATGGGTTTTATGGACATAAAGAGATTAAGATGATGATGATAATGGGAGATTCTGAATCACACGGCGTTGCACTCAACCAATCTGCTGCTAACCATGCTTTCTTCAAGGTATTTTCAAATTATGATTTTCACAATCTTCTCTTTTTTTTTTTCTTTTTTTTTTTAAATTACATAAAATTATGTTTAGATTTCACAGATGATGAAGAAGGAAGATGAGGAGAAGGAACTGTCCCTGTGCCTGTCCTTACAACACCATTGCCATGGTTCAAGCAGCGAAATCAGTGAGGCGATTTCATCTTCAAGTTCAAAGTTGGATAATAATCATAATAATAATCATAATAATAGCTATAGAGATTGCTCGAGTTGGTCGTACGGAAGGCAACAACAGCAGCAAATTGGTGTTAATTTAGAGTTGTCAATGGCGCTTTGTGGTAGCCGATGAGGGTTTGTGTGTAATCAATTTTACTCTCTTTTTTTAATATAATGTTGGACAACAAAAACATCGTTGTTTAGAACTCGAATGCAGCTGTGTCTTTTAAATTTAATTTAAATTAATTACACTTTTGGTCACAAATTTGTGACAAGTTTTAAAATTGATTAAATAATGTGAAATTTGTTACAATAA

mRNA sequence

TGAAGCAGTTGGGAGTATATTTAGATGTAATGATTTGAAAGCAAAAGATTTAAAAGAAAAGGCAACAAAAAATTCAGAAAAAAAATGTGTCCCCAATTTCATTTTGATTTTGGTGAATGGTAATGATACATGTATTTGTTGTTTGTTCAACAGTGACAGTCCGCAGAGAAGGCAGTAGCAGAGGAAGCAGCAGAAGCAGCAGCAGCAGCACCAGCAGCTCTCTTTAAGGAATTTTCAGACTCCCCCTTCGAATTTAGGCATTAGATTCAGAGAGATGAGTAGAAATGGAAGTGTGCGACAGTATATAAGATCCAAAGTCCCTAGATTGAGATGGACTCCCGAGCTTCACCACTGCTTTGTTCTTGCAATTCAAACACTTGGTGGCCATCACAAGGCAACGCCAAAGCTGGTTCTTCAGCTCATGGATGTGAAAGGACTCACCATTTCACACGTAAAGAGCCATCTTCAGATGTATAGAAGCACCAGGGCAGATATGGGAAGACAAGATCATAAGTGTTCGAGTGTTGGAAGAAAGGTAAGTAATTTGGAGGAGGAAGACGAGGACGGGTGTGTAGAAGAAGAAAACGTAAAGGGAGGTGGAGTCATTTACAGATCAACAACAACAACAACAACTCGAACTTCAGCTTCCAAAAGAGGGAATAGAAGCTCAAGAAATGATGGGTTTTATGGACATAAAGAGATTAAGATGATGATGATAATGGGAGATTCTGAATCACACGGCGTTGCACTCAACCAATCTGCTGCTAACCATGCTTTCTTCAAGATTTCACAGATGATGAAGAAGGAAGATGAGGAGAAGGAACTGTCCCTGTGCCTGTCCTTACAACACCATTGCCATGGTTCAAGCAGCGAAATCAGTGAGGCGATTTCATCTTCAAGTTCAAAGTTGGATAATAATCATAATAATAATCATAATAATAGCTATAGAGATTGCTCGAGTTGGTCGTACGGAAGGCAACAACAGCAGCAAATTGGTGTTAATTTAGAGTTGTCAATGGCGCTTTGTGGTAGCCGATGAGGGTTTGTGTGTAATCAATTTTACTCTCTTTTTTTAATATAATGTTGGACAACAAAAACATCGTTGTTTAGAACTCGAATGCAGCTGTGTCTTTTAAATTTAATTTAAATTAATTACACTTTTGGTCACAAATTTGTGACAAGTTTTAAAATTGATTAAATAATGTGAAATTTGTTACAATAA

Coding sequence (CDS)

ATGAGTAGAAATGGAAGTGTGCGACAGTATATAAGATCCAAAGTCCCTAGATTGAGATGGACTCCCGAGCTTCACCACTGCTTTGTTCTTGCAATTCAAACACTTGGTGGCCATCACAAGGCAACGCCAAAGCTGGTTCTTCAGCTCATGGATGTGAAAGGACTCACCATTTCACACGTAAAGAGCCATCTTCAGATGTATAGAAGCACCAGGGCAGATATGGGAAGACAAGATCATAAGTGTTCGAGTGTTGGAAGAAAGGTAAGTAATTTGGAGGAGGAAGACGAGGACGGGTGTGTAGAAGAAGAAAACGTAAAGGGAGGTGGAGTCATTTACAGATCAACAACAACAACAACAACTCGAACTTCAGCTTCCAAAAGAGGGAATAGAAGCTCAAGAAATGATGGGTTTTATGGACATAAAGAGATTAAGATGATGATGATAATGGGAGATTCTGAATCACACGGCGTTGCACTCAACCAATCTGCTGCTAACCATGCTTTCTTCAAGATTTCACAGATGATGAAGAAGGAAGATGAGGAGAAGGAACTGTCCCTGTGCCTGTCCTTACAACACCATTGCCATGGTTCAAGCAGCGAAATCAGTGAGGCGATTTCATCTTCAAGTTCAAAGTTGGATAATAATCATAATAATAATCATAATAATAGCTATAGAGATTGCTCGAGTTGGTCGTACGGAAGGCAACAACAGCAGCAAATTGGTGTTAATTTAGAGTTGTCAATGGCGCTTTGTGGTAGCCGATGA

Protein sequence

MSRNGSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSTRADMGRQDHKCSSVGRKVSNLEEEDEDGCVEEENVKGGGVIYRSTTTTTTRTSASKRGNRSSRNDGFYGHKEIKMMMIMGDSESHGVALNQSAANHAFFKISQMMKKEDEEKELSLCLSLQHHCHGSSSEISEAISSSSSKLDNNHNNNHNNSYRDCSSWSYGRQQQQQIGVNLELSMALCGSR

Homology

[Close]

BLAST of Cp4.1LG01g17410 vs. Swiss-Prot
Match: MYBF_ARATH (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana GN=At1g14600 PE=2 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-27
Identity = 99/262 (37.79%), Postives = 131/262 (50.00%), Query Frame = 1


Query: 5   GSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHL 64
           G VR Y+RS VPRLRWTPELH  FV A+  LGG +KATPKLVL++MDVKGLTISHVKSHL
Sbjct: 13  GGVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHL 72

Query: 65  QMYRSTRADMGRQDHKCSSVGRKVSNLEEEDEDGCVEEENVKGGGVIYRSTTTTTTRTSA 124
           QMYR +R  +  +  + SS   +    ++ +ED   +  +V           +   R   
Sbjct: 73  QMYRGSRITLLGKPEESSSPSSRRRRRQDNEEDHLHDNLSVHARNDCLLGFHSFNFREQT 132

Query: 125 SKRGNRSSRNDGFYGHKEIKMMMIMGDS---ESHGVALNQSAANHAFFKISQMMKKEDEE 184
           S   N           +  K     G+S   +SH     ++  N   +K +    + +EE
Sbjct: 133 SATDNDDDDFLNIMNMERTKTFAGNGESIKFQSHHSLEAENTKN--IWKNTWRENEHEEE 192

Query: 185 KELSLCLSLQH-HCH---------GSSSEISEAISSSSSKLDNNHNNNHNNSYRDCSSWS 244
           +ELSL LSL H H H          S SE SEA+SSSS              +RDC + S
Sbjct: 193 EELSLSLSLNHPHNHQQRWKSNASSSLSETSEAVSSSSGPF----------IFRDCFASS 252

Query: 245 YGRQQQQQIGVNLELSMALCGS 254
                  +I +NL LS +L  S
Sbjct: 253 -------KIDLNLNLSFSLLHS 255

[Close]

BLAST of Cp4.1LG01g17410 vs. Swiss-Prot
Match: KAN1_ARATH (Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.0e-16
Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 1


Query: 14  KVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSTRAD 73
           + PR+RWT  LH  FV A++ LGGH +ATPK VL+LMDVK LT++HVKSHLQMYR+    
Sbjct: 218 RAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTV--- 277

Query: 74  MGRQDHKCSSVGRKVSNLEEEDEDGCVEEE-NVKGGGVIYRSTT 117
                        K +N      DG  EEE  + G  V ++S+T
Sbjct: 278 -------------KTTNKPAASSDGSGEEEMGINGNEVHHQSST 305

[Close]

BLAST of Cp4.1LG01g17410 vs. Swiss-Prot
Match: KAN2_ARATH (Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.7e-15
Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 1


Query: 14  KVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSTR 72
           + PR+RWT  LH  FV A++ LGGH +ATPK VL+LMDVK LT++HVKSHLQMYR+ +
Sbjct: 212 RAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 269

[Close]

BLAST of Cp4.1LG01g17410 vs. Swiss-Prot
Match: KAN3_ARATH (Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.5e-15
Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 1


Query: 14  KVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSTRA 73
           + PR+RWT  LH  FV A+Q LGGH +ATPK VL+LMDV+ LT++HVKSHLQMYR+ ++
Sbjct: 163 RAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTIKS 221

[Close]

BLAST of Cp4.1LG01g17410 vs. Swiss-Prot
Match: KAN4_ARATH (Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.7e-15
Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = 1


Query: 14  KVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSTRAD 73
           + PR+RWT  LH  FV A+Q LGGH +ATPK VL+LM+VK LT++HVKSHLQMYR+ +  
Sbjct: 104 RAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKC- 163

Query: 74  MGRQDHKCSSVGRKVSNLEEEDEDGCVEEENVKGGGVIYRSTTTTTTRTSASKRGNRSS 133
               D      G+     E+  ED    EE  +G       T T +  +S+ ++  R+S
Sbjct: 164 ---TDKGSPGEGKVEKEAEQRIEDNNNNEEADEG-------TDTNSPNSSSVQKTQRAS 211

[Close]

BLAST of Cp4.1LG01g17410 vs. TrEMBL
Match: A0A0A0KSV1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G276460 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.6e-75
Identity = 180/273 (65.93%), Postives = 202/273 (73.99%), Query Frame = 1


Query: 3   RNGSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKS 62
           RNGSVRQYIRSKVPRLRWTP+LHH FVLAI+ LGGH KATPKLVLQLMDVKGLTISHVKS
Sbjct: 8   RNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHVKS 67

Query: 63  HLQMYRSTRADMGRQDHKCSS-VGRKVSNLE-EEDEDGCVEEENVKGGGVIYRSTTTTTT 122
           HLQMYRS RADMGRQD  CSS + RKVSNLE +E EDGCVEEE VKGG +IYRS T  + 
Sbjct: 68  HLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYRSRTIQSP 127

Query: 123 RTSASKRGNRS---SRNDGFYGH-----KEIKMMMIMGDSESHGVALNQSA-ANHAFFKI 182
            +   K G      SRN+ +YG+     +E      M DSES G  LNQSA ANHAF   
Sbjct: 128 ASKRVKIGWEERIISRNEEYYGNGNNGERENIKRKKMCDSESDGFILNQSATANHAF--- 187

Query: 183 SQMMKKEDEEK----------ELSLCLSLQHHCHGSSSEISEAISSSSSKLDNNHNNNHN 242
            +MMK+E  E+          ELSL LSLQHH H SSSE+SEAISSSSSKLD   +NN+N
Sbjct: 188 -KMMKQEAHERAEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSSKLD---DNNNN 247

Query: 243 NSYRDCSSWSYGRQQQQQIGVNLELSMALCGSR 255
           + YRD  SWSYGR +Q +IGVNL+L+MALCGSR
Sbjct: 248 DDYRDSWSWSYGR-EQPKIGVNLDLTMALCGSR 272

[Close]

BLAST of Cp4.1LG01g17410 vs. TrEMBL
Match: A0A059D699_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02627 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 121/299 (40.47%), Postives = 149/299 (49.83%), Query Frame = 1


Query: 3   RNGSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKS 62
           R+G+VRQY+RSKVPRLRWTPELH CFV AIQ LGG  KATPKLVLQLMDV+GLTISHVKS
Sbjct: 6   RSGTVRQYVRSKVPRLRWTPELHQCFVHAIQRLGGQDKATPKLVLQLMDVRGLTISHVKS 65

Query: 63  HLQMYRSTRADMGRQDHKCSSVGRKVSNLEEEDED-GCVEEENVKGG------GVIYRS- 122
           HLQMYRS R+D+GR D  C    R+ +  ++ D D GCVEE N   G        ++ S 
Sbjct: 66  HLQMYRSMRSDLGRSDRGCGQQKRRAAEDDDPDRDGGCVEEVNDDEGPPHAFAKPVHHSR 125

Query: 123 ----------------TTTTTTRTSASKRGNRSSRNDGFYGHKEIKMMMIMGDSESHGVA 182
                           TTTT+     +  G      DGF  H       +   ++    A
Sbjct: 126 FACSSPCKRSRTEKVATTTTSAVAEQAPYGFEVGGVDGFRWHTPCMPRDLHSFNDPLECA 185

Query: 183 LNQSAANHAFFKISQMMK-------------------KEDEEKELSLCLSLQ----HHCH 242
             + +      K+   M+                   +  +  ELSL LSLQ    H  +
Sbjct: 186 AKEESKFPLIAKLQDRMQMPRKGLKLTDWRSFPLEEYEVSQGCELSLSLSLQCHSIHRSN 245

Query: 243 GSS-SEISEAISSSSSKLDNNHNNNHNNSYRDCSSWSYGRQQQQQIGVNLELSMALCGS 254
           GSS SEISEA SS S               R+CS          +  VNL+LS+ALCGS
Sbjct: 246 GSSTSEISEAFSSCSRS-------------RECSG-----PCSDKSSVNLDLSIALCGS 286

[Close]

BLAST of Cp4.1LG01g17410 vs. TrEMBL
Match: D9ZJ75_MALDO (MYBR domain class transcription factor OS=Malus domestica GN=MYBR14 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 116/291 (39.86%), Postives = 156/291 (53.61%), Query Frame = 1


Query: 2   SRNGSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVK 61
           +RNG+VRQY+RSKVPRLRWTPELH CF+ AI+ LGGH KATPKLVLQ MDVKGLTISHVK
Sbjct: 8   ARNGAVRQYVRSKVPRLRWTPELHRCFLQAIERLGGHRKATPKLVLQFMDVKGLTISHVK 67

Query: 62  SHLQMYRSTRADMGRQDHKCSSVGRKVSNLEEEDEDGCVEEEN----------------- 121
           SHLQMYRS +    R+  +  +  RK+ + EE  +DGCVEE N                 
Sbjct: 68  SHLQMYRSMKGYPIRRQDRVQT--RKLHSFEEAKDDGCVEEVNGLSFYPSSKPPENPIPR 127

Query: 122 VKGGGVIYRSTTTTTTRT---SASKRGNRSSRNDGFY-----GHKEIKMMMIMGDSES-H 181
                 + ++TT T +     ++  +        G Y      +     M+ +G  E  H
Sbjct: 128 SSATPAVQKATTETMSSNISENSQPQQQLQCSQGGIYVRVSNPYSFDDYMLALGIKEDPH 187

Query: 182 GVALNQSAANHAFFKISQMMK------KEDEEK---ELSLCLSLQH----HCHGSSSEIS 241
             A   +     F K++   +      K+D+E    ELSL LSL H      + SSS++S
Sbjct: 188 PSAFKFALPESEFLKVTTKQEAGRAHAKDDDEASECELSLSLSLHHPPSHKSNASSSDLS 247

Query: 242 EAISSSSSKLDNNHNNNHNNSYRDCSSWSYGRQQQQQIGVNLELSMALCGS 254
            AISSS S+          ++Y+DCS+ S G +      +NL LS+ALC +
Sbjct: 248 GAISSSYSR----------SNYKDCSASSSGNR-----SLNLNLSIALCSN 281

[Close]

BLAST of Cp4.1LG01g17410 vs. TrEMBL
Match: I1NFA5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G108600 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.9e-34
Identity = 101/200 (50.50%), Postives = 116/200 (58.00%), Query Frame = 1


Query: 3   RNGSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKS 62
           R GSVRQY+RSKVPRLRWTPELH CFV AI +LGGHHKATPKLVLQLMDVKGLTISHVKS
Sbjct: 6   REGSVRQYVRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKS 65

Query: 63  HLQMYRSTRADMGRQDHKCSSVGRKVSNLEEEDEDGCVEEENVKGGGVIYRSTTTTTTRT 122
           HLQMYRS R D+GRQ  + SS  R  S   EE +DGCV+E N  G               
Sbjct: 66  HLQMYRSMRGDLGRQG-RTSSQHRNQS--FEEHDDGCVDEGNDVG------------VEY 125

Query: 123 SASKRGNRSSRNDGFYGHKEI---KMMMIMGDSESHGVALNQSAAN-----HAFFKISQM 182
           S SK   R S  D F+GH  +   +  +    S S  +  +Q   +     + F+   Q 
Sbjct: 126 SCSKPMGRES--DSFFGHSNLPPKRARIETRSSISESLQCSQRLCDAVQNPYCFYDYLQQ 185

Query: 183 MK-KEDEEKELSLCLSLQHH 194
            K   DE KE S     Q H
Sbjct: 186 KKPMADEHKEFSTWQQAQPH 188

[Close]

BLAST of Cp4.1LG01g17410 vs. TrEMBL
Match: A0A0B2PQX6_GLYSO (Putative Myb family transcription factor OS=Glycine soja GN=glysoja_015375 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.6e-33
Identity = 99/200 (49.50%), Postives = 114/200 (57.00%), Query Frame = 1


Query: 3   RNGSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKS 62
           R GSVRQY+RSKVPRLRWTPELH CFV AI +LGGHHKATPKLVLQLMDVKGLTISHVKS
Sbjct: 6   REGSVRQYVRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKS 65

Query: 63  HLQMYRSTRADMGRQDHKCSSVGRKVSNLEEEDEDGCVEEENVKGGGVIYRSTTTTTTRT 122
           HLQMYRS R D+GRQ    S    +  + EE D DGCV+E N  G               
Sbjct: 66  HLQMYRSMRGDLGRQGRTPSQ--HRNQSFEEHD-DGCVDEGNDVG------------VEY 125

Query: 123 SASKRGNRSSRNDGFYGHKEI---KMMMIMGDSESHGVALNQSAAN-----HAFFKISQM 182
           S SK   R S  D F+GH  +   +  +    S S  +  +Q   +     + F+   Q 
Sbjct: 126 SCSKPMGRES--DSFFGHSNLPPKRARIETRSSISESLQCSQRLCDAVQNPYCFYDYLQQ 185

Query: 183 MK-KEDEEKELSLCLSLQHH 194
            K   DE KE S     Q H
Sbjct: 186 KKPMADEHKEFSTWQQAQPH 188

[Close]

BLAST of Cp4.1LG01g17410 vs. TAIR10
Match: AT1G14600.1 (AT1G14600.1 Homeodomain-like superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 99/262 (37.79%), Postives = 131/262 (50.00%), Query Frame = 1


Query: 5   GSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHL 64
           G VR Y+RS VPRLRWTPELH  FV A+  LGG +KATPKLVL++MDVKGLTISHVKSHL
Sbjct: 13  GGVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHL 72

Query: 65  QMYRSTRADMGRQDHKCSSVGRKVSNLEEEDEDGCVEEENVKGGGVIYRSTTTTTTRTSA 124
           QMYR +R  +  +  + SS   +    ++ +ED   +  +V           +   R   
Sbjct: 73  QMYRGSRITLLGKPEESSSPSSRRRRRQDNEEDHLHDNLSVHARNDCLLGFHSFNFREQT 132

Query: 125 SKRGNRSSRNDGFYGHKEIKMMMIMGDS---ESHGVALNQSAANHAFFKISQMMKKEDEE 184
           S   N           +  K     G+S   +SH     ++  N   +K +    + +EE
Sbjct: 133 SATDNDDDDFLNIMNMERTKTFAGNGESIKFQSHHSLEAENTKN--IWKNTWRENEHEEE 192

Query: 185 KELSLCLSLQH-HCH---------GSSSEISEAISSSSSKLDNNHNNNHNNSYRDCSSWS 244
           +ELSL LSL H H H          S SE SEA+SSSS              +RDC + S
Sbjct: 193 EELSLSLSLNHPHNHQQRWKSNASSSLSETSEAVSSSSGPF----------IFRDCFASS 252

Query: 245 YGRQQQQQIGVNLELSMALCGS 254
                  +I +NL LS +L  S
Sbjct: 253 -------KIDLNLNLSFSLLHS 255

[Close]

BLAST of Cp4.1LG01g17410 vs. TAIR10
Match: AT2G02060.1 (AT2G02060.1 Homeodomain-like superfamily protein)

HSP 1 Score: 112.8 bits (281), Expect = 3.0e-25
Identity = 86/219 (39.27%), Postives = 125/219 (57.08%), Query Frame = 1


Query: 7   VRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQM 66
           VR Y+RS VPRLRWTP+LH CFV A++ LGG H+ATPKLVL++MDVKGLTISHVKSHLQM
Sbjct: 21  VRPYVRSPVPRLRWTPDLHRCFVHAVEILGGQHRATPKLVLKMMDVKGLTISHVKSHLQM 80

Query: 67  YR-STRADMGRQDHKCSSVGRKVSNLEEE----DEDGCVEEENVKGGGVIYRSTTTTTTR 126
           YR  ++  + + +   SS  R+  + EE+    D        +   G   +  ++ ++ R
Sbjct: 81  YRGGSKLTLEKPEESSSSSIRRRQDSEEDYYLHDNLSLHTRNDCLLGFHSFPLSSHSSFR 140

Query: 127 TSASKR--GNRSSRNDGFYGHKEIKMMMIMGDSESHGVALNQSAANHAFFKISQMMKK-- 186
                R    ++S + G+    +   +  M D+ +          +H F K ++  ++  
Sbjct: 141 GGGGGRTKEQQTSESGGYDDDADFLHIKKMNDTTTF--------LSHHFPKGTEEWREQE 200

Query: 187 -EDEEKELSLCLSLQHH---CHGSS--SEISEAISSSSS 211
            E+EE++LSL LSL HH    +GSS  SE SEA  S+ S
Sbjct: 201 HEEEEEDLSLSLSLNHHHWRSNGSSVVSETSEAAVSTCS 231

[Close]

BLAST of Cp4.1LG01g17410 vs. TAIR10
Match: AT2G40260.1 (AT2G40260.1 Homeodomain-like superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 3.3e-24
Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = 1


Query: 5   GSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHL 64
           GSVR Y RSK PRLRWTPELH CF+ A++ LGG  +ATPKLVLQLM+VKGL+I+HVKSHL
Sbjct: 72  GSVRPYNRSKTPRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHL 131

Query: 65  QMYRSTRAD 74
           QMYRS + D
Sbjct: 132 QMYRSKKTD 140

[Close]

BLAST of Cp4.1LG01g17410 vs. TAIR10
Match: AT2G42660.1 (AT2G42660.1 Homeodomain-like superfamily protein)

HSP 1 Score: 99.4 bits (246), Expect = 3.5e-21
Identity = 49/101 (48.51%), Postives = 72/101 (71.29%), Query Frame = 1


Query: 6   SVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQ 65
           +VRQYIRS +PRLRWTP+LH  FV A+Q LGG  +ATPKLVL++M++KGL+I+HVKSHLQ
Sbjct: 41  NVRQYIRSNMPRLRWTPDLHLSFVRAVQRLGGPDRATPKLVLEMMNLKGLSIAHVKSHLQ 100

Query: 66  MYRSTRADMGRQDHKCSSVGRKVSNLEEEDEDGCVEEENVK 107
           MYRS + +   +    + +  + S L +  +  C+   +++
Sbjct: 101 MYRSKKLEPSSRPGFGAFMSGQRSYLMDMIDSRCIPHSDLR 141

[Close]

BLAST of Cp4.1LG01g17410 vs. TAIR10
Match: AT2G38300.1 (AT2G38300.1 myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 86.3 bits (212), Expect = 3.0e-17
Identity = 80/250 (32.00%), Postives = 125/250 (50.00%), Query Frame = 1


Query: 7   VRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQM 66
           VR Y+RSKVPRLRWTP+LH  FV A++ LGG  +ATPKLV Q+M++KGL+I+HVKSHLQM
Sbjct: 46  VRPYVRSKVPRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQM 105

Query: 67  YRSTRADMGRQDHKCSSVGRKVSNLEEEDEDGCVEEEN----VKGGGVIYRSTTTTTTRT 126
           YRS + D    D   +  G K  +L E   D  + + +     +G    + S     ++ 
Sbjct: 106 YRSKKID----DQGQAIAGHK--HLFETSTDRNIYKLSQLPMFRGYNHNHDSPFRYGSKI 165

Query: 127 SASKRGNRSSRNDGFYGHKEIKMMMIMGDSESHGVALNQSAANHAFFKISQMMKKEDEEK 186
           S +   N SS+        +I+  +I   S S+ +  +    N+  F+        +   
Sbjct: 166 SNASLWNSSSQGTERSLIDQIRPGLIRNASVSNNIRGSDYWTNNKSFQNIYSSSISNHFP 225

Query: 187 ELSLCLSLQHHCHGSSSEIS----EAISSSSSKLDNNHNNNHNNSYRDCSSWSYGRQQQQ 246
           +      L+H  H  ++ ++    +  S +  K  N    N N+SY  CS  +  R   +
Sbjct: 226 K------LRHDHHERTNSVTFNSIQGHSRTFQKFHNGVEENTNHSY--CSKTNGKRDASR 281

Query: 247 QIGVNLELSM 249
            I ++L L +
Sbjct: 286 SIDLDLSLKL 281

[Close]

BLAST of Cp4.1LG01g17410 vs. NCBI nr
Match: gi|659120469|ref|XP_008460209.1| (PREDICTED: putative Myb family transcription factor At1g14600 isoform X2 [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 7.1e-77
Identity = 180/273 (65.93%), Postives = 205/273 (75.09%), Query Frame = 1


Query: 3   RNGSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKS 62
           RNGSVRQYIRSKVPRLRWTP+LHH FVLAI+ LGGH KATPKLVLQLMDVKGLTISHVKS
Sbjct: 8   RNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHVKS 67

Query: 63  HLQMYRSTRADMGRQDHKCSS-VGRKVSNL-EEEDEDGCVEEENVKGGGVIYRSTTTTTT 122
           HLQMYRS RADMGRQD  CSS + RKVSNL ++E EDGCVEEE VKGG +IYRS T  + 
Sbjct: 68  HLQMYRSMRADMGRQDRSCSSTLQRKVSNLDDDEGEDGCVEEEVVKGGRIIYRSRTIQSP 127

Query: 123 RTSASKRGNRS---SRNDGFYGH-----KEIKMMMIMGDSESHGVALNQSA-ANHAFFKI 182
            +   K G      SRN+ +YG+     +E      M DSES G A+NQSA ANHAF   
Sbjct: 128 ASKRVKIGWEERIISRNEAYYGNGNNGERENIRRKKMCDSESDGYAINQSATANHAF--- 187

Query: 183 SQMMKKEDEEK----------ELSLCLSLQHHCHGSSSEISEAISSSSSKLDNNHNNNHN 242
            +MMK+E  E+          EL+L LSLQHH H SSSE+SEAISSSSSKLD   NNN+N
Sbjct: 188 -KMMKQEGHERAEKIKESKCFELTLSLSLQHHYHHSSSEMSEAISSSSSKLD---NNNNN 247

Query: 243 NSYRDCSSWSYGRQQQQQIGVNLELSMALCGSR 255
           + YRDC SWSYGR +QQ+IGVNL+L+MALCGS+
Sbjct: 248 DDYRDCWSWSYGR-EQQKIGVNLDLTMALCGSQ 272

[Close]

BLAST of Cp4.1LG01g17410 vs. NCBI nr
Match: gi|659120467|ref|XP_008460208.1| (PREDICTED: putative Myb family transcription factor At1g14600 isoform X1 [Cucumis melo])

HSP 1 Score: 290.0 bits (741), Expect = 3.9e-75
Identity = 182/301 (60.47%), Postives = 208/301 (69.10%), Query Frame = 1


Query: 3   RNGSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKS 62
           RNGSVRQYIRSKVPRLRWTP+LHH FVLAI+ LGGH KATPKLVLQLMDVKGLTISHVKS
Sbjct: 8   RNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHVKS 67

Query: 63  HLQMYRSTRADMGRQDHKCSS-VGRKVSNL-EEEDEDGCVEEENVKGGGVIYRSTTTTTT 122
           HLQMYRS RADMGRQD  CSS + RKVSNL ++E EDGCVEEE VKGG +IYRS T  + 
Sbjct: 68  HLQMYRSMRADMGRQDRSCSSTLQRKVSNLDDDEGEDGCVEEEVVKGGRIIYRSRTIQSP 127

Query: 123 RTSASKRGNRS---SRNDGFYGH-----KEIKMMMIMGDSESHGVALNQSA-ANHAFFKI 182
            +   K G      SRN+ +YG+     +E      M DSES G A+NQSA ANHAF   
Sbjct: 128 ASKRVKIGWEERIISRNEAYYGNGNNGERENIRRKKMCDSESDGYAINQSATANHAF--- 187

Query: 183 SQMMKKEDEEK----------ELSLCLSLQHHCHGSSSEISEAISSSSSKLDN------- 242
            +MMK+E  E+          EL+L LSLQHH H SSSE+SEAISSSSSKLDN       
Sbjct: 188 -KMMKQEGHERAEKIKESKCFELTLSLSLQHHYHHSSSEMSEAISSSSSKLDNHNDDDDD 247

Query: 243 ---------------------NHNNNHNNSYRDCSSWSYGRQQQQQIGVNLELSMALCGS 255
                                N+NNN+N+ YRDC SWSYGR +QQ+IGVNL+L+MALCGS
Sbjct: 248 DDNNNNNNNNNNNNNNNNNNDNNNNNNNDDYRDCWSWSYGR-EQQKIGVNLDLTMALCGS 303

[Close]

BLAST of Cp4.1LG01g17410 vs. NCBI nr
Match: gi|778701853|ref|XP_011655099.1| (PREDICTED: putative Myb family transcription factor At1g14600 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 6.7e-75
Identity = 180/273 (65.93%), Postives = 202/273 (73.99%), Query Frame = 1


Query: 3   RNGSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKS 62
           RNGSVRQYIRSKVPRLRWTP+LHH FVLAI+ LGGH KATPKLVLQLMDVKGLTISHVKS
Sbjct: 8   RNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHVKS 67

Query: 63  HLQMYRSTRADMGRQDHKCSS-VGRKVSNLE-EEDEDGCVEEENVKGGGVIYRSTTTTTT 122
           HLQMYRS RADMGRQD  CSS + RKVSNLE +E EDGCVEEE VKGG +IYRS T  + 
Sbjct: 68  HLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYRSRTIQSP 127

Query: 123 RTSASKRGNRS---SRNDGFYGH-----KEIKMMMIMGDSESHGVALNQSA-ANHAFFKI 182
            +   K G      SRN+ +YG+     +E      M DSES G  LNQSA ANHAF   
Sbjct: 128 ASKRVKIGWEERIISRNEEYYGNGNNGERENIKRKKMCDSESDGFILNQSATANHAF--- 187

Query: 183 SQMMKKEDEEK----------ELSLCLSLQHHCHGSSSEISEAISSSSSKLDNNHNNNHN 242
            +MMK+E  E+          ELSL LSLQHH H SSSE+SEAISSSSSKLD   +NN+N
Sbjct: 188 -KMMKQEAHERAEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSSKLD---DNNNN 247

Query: 243 NSYRDCSSWSYGRQQQQQIGVNLELSMALCGSR 255
           + YRD  SWSYGR +Q +IGVNL+L+MALCGSR
Sbjct: 248 DDYRDSWSWSYGR-EQPKIGVNLDLTMALCGSR 272

[Close]

BLAST of Cp4.1LG01g17410 vs. NCBI nr
Match: gi|702273416|ref|XP_010043897.1| (PREDICTED: uncharacterized protein LOC104432988 [Eucalyptus grandis])

HSP 1 Score: 154.8 bits (390), Expect = 2.0e-34
Identity = 121/299 (40.47%), Postives = 149/299 (49.83%), Query Frame = 1


Query: 3   RNGSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKS 62
           R+G+VRQY+RSKVPRLRWTPELH CFV AIQ LGG  KATPKLVLQLMDV+GLTISHVKS
Sbjct: 6   RSGTVRQYVRSKVPRLRWTPELHQCFVHAIQRLGGQDKATPKLVLQLMDVRGLTISHVKS 65

Query: 63  HLQMYRSTRADMGRQDHKCSSVGRKVSNLEEEDED-GCVEEENVKGG------GVIYRS- 122
           HLQMYRS R+D+GR D  C    R+ +  ++ D D GCVEE N   G        ++ S 
Sbjct: 66  HLQMYRSMRSDLGRSDRGCGQQKRRAAEDDDPDRDGGCVEEVNDDEGPPHAFAKPVHHSR 125

Query: 123 ----------------TTTTTTRTSASKRGNRSSRNDGFYGHKEIKMMMIMGDSESHGVA 182
                           TTTT+     +  G      DGF  H       +   ++    A
Sbjct: 126 FACSSPCKRSRTEKVATTTTSAVAEQAPYGFEVGGVDGFRWHTPCMPRDLHSFNDPLECA 185

Query: 183 LNQSAANHAFFKISQMMK-------------------KEDEEKELSLCLSLQ----HHCH 242
             + +      K+   M+                   +  +  ELSL LSLQ    H  +
Sbjct: 186 AKEESKFPLIAKLQDRMQMPRKGLKLTDWRSFPLEEYEVSQGCELSLSLSLQCHSIHRSN 245

Query: 243 GSS-SEISEAISSSSSKLDNNHNNNHNNSYRDCSSWSYGRQQQQQIGVNLELSMALCGS 254
           GSS SEISEA SS S               R+CS          +  VNL+LS+ALCGS
Sbjct: 246 GSSTSEISEAFSSCSRS-------------RECSG-----PCSDKSSVNLDLSIALCGS 286

[Close]

BLAST of Cp4.1LG01g17410 vs. NCBI nr
Match: gi|658309499|ref|NP_001280888.1| (putative Myb family transcription factor At1g14600 [Malus domestica])

HSP 1 Score: 154.8 bits (390), Expect = 2.0e-34
Identity = 116/291 (39.86%), Postives = 156/291 (53.61%), Query Frame = 1


Query: 2   SRNGSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVK 61
           +RNG+VRQY+RSKVPRLRWTPELH CF+ AI+ LGGH KATPKLVLQ MDVKGLTISHVK
Sbjct: 8   ARNGAVRQYVRSKVPRLRWTPELHRCFLQAIERLGGHRKATPKLVLQFMDVKGLTISHVK 67

Query: 62  SHLQMYRSTRADMGRQDHKCSSVGRKVSNLEEEDEDGCVEEEN----------------- 121
           SHLQMYRS +    R+  +  +  RK+ + EE  +DGCVEE N                 
Sbjct: 68  SHLQMYRSMKGYPIRRQDRVQT--RKLHSFEEAKDDGCVEEVNGLSFYPSSKPPENPIPR 127

Query: 122 VKGGGVIYRSTTTTTTRT---SASKRGNRSSRNDGFY-----GHKEIKMMMIMGDSES-H 181
                 + ++TT T +     ++  +        G Y      +     M+ +G  E  H
Sbjct: 128 SSATPAVQKATTETMSSNISENSQPQQQLQCSQGGIYVRVSNPYSFDDYMLALGIKEDPH 187

Query: 182 GVALNQSAANHAFFKISQMMK------KEDEEK---ELSLCLSLQH----HCHGSSSEIS 241
             A   +     F K++   +      K+D+E    ELSL LSL H      + SSS++S
Sbjct: 188 PSAFKFALPESEFLKVTTKQEAGRAHAKDDDEASECELSLSLSLHHPPSHKSNASSSDLS 247

Query: 242 EAISSSSSKLDNNHNNNHNNSYRDCSSWSYGRQQQQQIGVNLELSMALCGS 254
            AISSS S+          ++Y+DCS+ S G +      +NL LS+ALC +
Sbjct: 248 GAISSSYSR----------SNYKDCSASSSGNR-----SLNLNLSIALCSN 281

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYBF_ARATH	1.8e-27	37.79	Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana GN=At...	[more]
KAN1_ARATH	7.0e-16	46.15	Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1 SV=1	[more]
KAN2_ARATH	2.7e-15	63.79	Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1	[more]
KAN3_ARATH	3.5e-15	62.71	Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3 PE=2 SV=1	[more]
KAN4_ARATH	7.7e-15	42.02	Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g17410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSV1_CUCSA	4.6e-75	65.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G276460 PE=4 SV=1	[more]
A0A059D699_EUCGR	1.4e-34	40.47	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02627 PE=4 SV=1	[more]
D9ZJ75_MALDO	1.4e-34	39.86	MYBR domain class transcription factor OS=Malus domestica GN=MYBR14 PE=2 SV=1	[more]
I1NFA5_SOYBN	8.9e-34	50.50	Uncharacterized protein OS=Glycine max GN=GLYMA_20G108600 PE=4 SV=1	[more]
A0A0B2PQX6_GLYSO	2.6e-33	49.50	Putative Myb family transcription factor OS=Glycine soja GN=glysoja_015375 PE=4 ...	[more]

BLAST of Cp4.1LG01g17410 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14600.1	1.0e-28	37.79	Homeodomain-like superfamily protein	[more]
AT2G02060.1	3.0e-25	39.27	Homeodomain-like superfamily protein	[more]
AT2G40260.1	3.3e-24	73.91	Homeodomain-like superfamily protein	[more]
AT2G42660.1	3.5e-21	48.51	Homeodomain-like superfamily protein	[more]
AT2G38300.1	3.0e-17	32.00	myb-like HTH transcriptional regulator family protein	[more]

BLAST of Cp4.1LG01g17410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120469\|ref\|XP_008460209.1\|	7.1e-77	65.93	PREDICTED: putative Myb family transcription factor At1g14600 isoform X2 [Cucumi...	[more]
gi\|659120467\|ref\|XP_008460208.1\|	3.9e-75	60.47	PREDICTED: putative Myb family transcription factor At1g14600 isoform X1 [Cucumi...	[more]
gi\|778701853\|ref\|XP_011655099.1\|	6.7e-75	65.93	PREDICTED: putative Myb family transcription factor At1g14600 [Cucumis sativus]	[more]
gi\|702273416\|ref\|XP_010043897.1\|	2.0e-34	40.47	PREDICTED: uncharacterized protein LOC104432988 [Eucalyptus grandis]	[more]
gi\|658309499\|ref\|NP_001280888.1\|	2.0e-34	39.86	putative Myb family transcription factor At1g14600 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf
IPR006447	Myb_dom_plants
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17410.1	Cp4.1LG01g17410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 17..68 score: 6.
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 16..69 score: 1.8
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 12..71 score: 1.3
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 14..70 score: 4.48
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 12..72 score: 10
None	No IPR available	PANTHER	PTHR31314	FAMILY NOT NAMED	coord: 1..104 score: 2.2
None	No IPR available	PANTHER	PTHR31314:SF10	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..104 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g17410	Wax gourd	cpewgoB0540
Cp4.1LG01g17410	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g17410	Cucurbita maxima (Rimu)	cmacpeB725
Cp4.1LG01g17410	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g17410	Cucurbita moschata (Rifu)	cmocpeB677
Cp4.1LG01g17410	Cucurbita moschata (Rifu)	cmocpeB680
Cp4.1LG01g17410	Cucurbita moschata (Rifu)	cmocpeB682
Cp4.1LG01g17410	Cucurbita moschata (Rifu)	cmocpeB686
Cp4.1LG01g17410	Wild cucumber (PI 183967)	cpecpiB453
Cp4.1LG01g17410	Cucumber (Chinese Long) v2	cpecuB448
Cp4.1LG01g17410	Bottle gourd (USVL1VR-Ls)	cpelsiB321
Cp4.1LG01g17410	Melon (DHL92) v3.5.1	cpemeB371
Cp4.1LG01g17410	Melon (DHL92) v3.6.1	cpemedB429