Cp4.1LG01g17320 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g17320
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDNA-binding protein BIN4
LocationCp4.1LG01 : 12128276 .. 12134085 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCTCGGTGTTTGTGTTATTTCCTTTTATTTATTTTTAGAATAAAGAAAACCAAAATTTGAGGGAAAAAAAAAAGATCAAGCGGGCGCTGATTGAAATTTTGCCCCGTCCTACCTTTCTGGCGTTCCATTACATTTTCTGCTTCCGAAGGAGGAGGAAGATAGCGAGGAGGAGGGAGACAGCGCGCCGTCGTTTGTTCATTGTTTTTTTCCCATTACTCTGGTGCTGTCGTGCGGCCTCTCAAGATCAAGTGAGTGATTTTCTGTTCCTTTTCTGGCTTTTTCTTAGCACCTCATATTCAATTTCCCTTAACATCTGTATCGAAACATTCATTCGTATGTCTTTTCTATTAGTCTTCAACACTATTCAAAAGAAAAAAAAAGAAAAAAGAATGGAAACTTGTAAAGAGATTCTCCAGTGCTAAGTATTTGTTGTTTTCCCTAATCTCCAGATCTTCGTAATATGTTTAATTAGATGCTGTGGTCTCTAGAGTTGAGATAATGTTAAATCTGGCACTCTGTAAGGTCCTTCCAGCTGCATTCACCTTTTGATTTTCTCATTATTTTTCGGGTCTCCTGGTATACCATTCTACTATTTTAAGATCTGGAGAGCTGGTTTTTTAGGGCTTTCTTTAGAGTTTCTTGGATGGTCAATCAATTTGTTGATATATCAATTGGAAAGAACGCATCCATTACCTGTCTCGAGTTCTTGATGCACCTGTGAAGTCTTCATTCAACCCTTGGGTTCGTTTTTCTGACTTACTTGTCCGACTAGATACATAATGAGGGGCTCTGATACCAAATGTTGATTTTGATCCTCAATCAAAGCACACCGAAATGAAAAGCCGAAACAGAAAGAACAACTCGAGGGAGAGTTTTTTTGTACTAAAGAATTTTAATTACTATGCTTTTCAATTATTTTTGTTAATGTGAATAAAGGGTTATTTCTAAACTTACTTTACAGGTTAATAACTACTGACCATTCTCCTAAAGAAAGCACTAACCATTTTCCTAAACTTGCTCCACAAGTTAATAGCGGCTAATAATTCTTATAAAGTTGCTCCGTGTTAATAACTTCTTTTACTAAGTCAAACTTATTGACTTACCACCTTCAATTATGTGTCTCAATAGAAATACTTGGGGTCTCTCTAGTTGTTCATGTTATGTCCTTCAAGTATCATGGCGTGAATGAACATCAACTCTGTTATACTTGATGCTTTGAAAACTGAGCTGTTTATCTTTTACTGAATACAGTGTTTTTCGATCTTGTGACGAGAATACTAGAGCTCGGTTTTTTTTCTTCTGTGTTCTAGTTAATATTTGAAAATCTGTGCATGTGCTCGTTACGTGGGAATCCCTATTTCTATGGTTATGTTATTTATGCTGAGTGAGCTAGTACTAAACAATTTTCATTTGGAGATCTAATTTCAATTTCTGCTGTCAAAATTTTCTTTATCTTTTGCTACATACTTCATTGGAGGGTAATTACGCATTTTATTGCATCTACAAATGAAGAAGCAATTAACGAAAATTATTTTGTTTAAGAACATCTGCATTCTTTATGACTCGACGAAACTATTTCTGCTCTTGGCATGCCGCGTTTGATTAATGTTTATGGGCATTCTTTATTTGATAGGATAAGTAATGTAGTGTTGCTTTTGAAACTAGATTTGAGGAGAGTGCTGGGGAAGAGCTTGGCAGTGGATCTCCAATCCAAGGATATTATTTGGCAGCGGCATGCTACTGTGGGAAGACCAGAAGACTTCTGAATTCGCTTGAAGGCCAAAATGAGCAGCTCGAGAGAGCAGTCTCCGGATTGGATGCGTTCTTTCCAAGTAATTTTGTCTACTTGACGGTTTTGTTTCACTATTATAGATCACTCTTCACGTGGATTTGAATTTTCCAAGTTTTCTATTCATATATGAACTTCAAAAACTGTCTTCCCAGATAATTTTGAACAATTGCAGGGGTTTCAACTCTACGTTCTTGCTTTTCAAAAGGCTGATTTGTAGTTGTAAGAACTATCATACTCATTCTTCCCAAAAGTTGTTGAAATAGTTGTCTTAAAGAGGAGAGAGAAAAATCATATATTTGTAACACTGATACTAAGGTTAAGATACAAGTTTTCAGTCATGTTTTTCCTTCTAGAGTTTGTATGTTTGAATTGTCTTTAAAGGTTTGAAATCGTGAAGCAATTATTGCAGAGTTATTTACTAGTATATGTCTTCATCTTCATTATCAATCCTGCACTTTGAGATCATTTCAAAGTTCATATATTTTTCATGATAATTGATACCAACAAGAACAATTTACTTGGTTGAATAGGCACCAACTAGTGCTGCCCTATCCTCTCATTCTGAATCTTCAACGAATGGTAGCTTATCAATGGGTGATTCAATTGATCAAAAGGGTCCATCTTCACTTAAAACCACACAAGATTCAGATGGAGATCAGATTCAAGGTATATCAAAGTTAAACTTAAAAAGTCTCAGTTCTCATCTTGTAGGAACATTGTCTGGCACCCAAGAGGAAATGAAAGTAAAGGCAAGAGAGAAATCATGTTTATGAAGAGCTTTGGTTTTGGTGTTACTCTAATAATCCTAAGCTGGAAACTTTAATGACTTTACGTGGATTCCTAACTACTAGGACTTAGATTATCATCCTTAAATTATGCTTTCTGGATCAATAACTCTTTGGTCTGATTGTTATAATGCAGGGGACAGTGACAACCATAATCTGGCAAAGGAAGTGAAACTTGAGGAACGTACAGGAAATGAAGTGAGAGAATTTACTTCTGGATTTTTACTTTTGTGTGTGTGTATTATTAGGAATATTAGTAATCTTCATCTAATTTGTTTCAAGAGTTCTACATAAGTACGGGATGGTTGGGAATTTTTTTAATATTCTAGTCTAAGTTGTTTGTAGTAAAATCTACTTTTCTGATGGGAGATTCTTGTTTTCATTTATCAGATCTCAAAGCAGTCAGTTTTGATGTTATCATCGGATTCTGAGTTATCGCCTGTTAATAGTTTTATAAAGGAGGATTATGGTCATCATGAAGAATTATCTGAACTTACGACATCTCACTTCCAAGGGAGAGGGAAGGATGAAAATGCAGGTGGAAAATCTAAATCAAGGAAAATATCAGATAAAAAGTTGTCAAAAAAACAGGTCAAATCAGAAGTTTGCACTTCGCCCGAAGAGAAGATAGTCATTTCTGATACAAATAAAGAACGACTTACGTTGGAAGGTGAGAGAGTAGTACGATAATAATGCATAACATTAAAAGGTAGAAGCTCTAGTGACTAATGAAGAAAACATTAAAATTACTCGAGTCTTGATCTTGTATGCTGCATCATGCATGAAAGCTACTGTCTGTTATGCATGATTTTGTATTGGAATATTTTGTGAAAAACTTTCGTCCATTCAGGATCTGAATGCTATGTAAGCAATGGTGGAGATGTGGAGATCATAGAAAAAGATGCATTGGATGACTGCAACGAACGTCCTGTAAGATTTAAGCTCAAACTGAAAAGAACAAACCTATATAGTTCATTATACTCTGGCCACTTATTTGCTTTAGCAATTCAATTTACAGGTTTCCTCCTCAAGGTTGCCATTGGTGCTGTCTGACAAAGTTCAAAGATTGAAGGTAGTGTTGCAACATAGATTACAATAAACGAGTTCTTTTGGCAGCTGCCTCTTGTCATGATTTAGGTTTTAAACCTTTCTGCTTCATTATATACGCATATATATATATATATATAAGTGAGGTTCATTCTATTATGGGCCCGTGTACATCCTTTTTAGTTTCTGAGTCGGGTTTTGGAGGGAAGAGGGGAAGTGAAGAAAGAATATTTAATACAAGATTGTAAAAACTATTGTCTTATGCAGGCACTTGTTGAGTGTGAAGGAAATTCAATAGATTTGAGTGGTGACATGGGTGCTGTAGGACGAATTGTAGTTTCTGATTCCTCATTTGCAAAAAATGAACTTTGCCTCGATTTGAAAGGTATGTTTCATTCATATGTTCTATGTTTTTCCATTAAGGGTCAGGTGTACTTCAACATATGTTTGCAAATGTTTATTTATTCCATACTCGTGATTAATGTCGAGTTTCTATATCGTTCTTTCGGACCTCGTTGGCTTATTTCAAAGATATTGGTATGTTTTGCCATTGTTGGTAACTTGCCTATGGTTTCCCAACTCAGGTACAATTTATAGAGCGGCAGTAGTTCCTTCAAGGACATTTTGCGTTGTATGTTATCATTCTCCACTTTTCTGATTCTTGAAATGGAACTTTTTTTTATTACGAACTCCGTACGTGAAAGTCACGTTGAAATGAAAGACCCTTTTTTATTGCTTTTTATTGTTCCAAAATGAATTATTTAAGAAATTTTCCACCTGGTTTTGTTGATGTAGATCTTGTCTTGTTCAGGTTAGCTTTGGTCAGTCGGAGGCGAAGGTCCGTCCTTTTCTCCCATCTATTACCTTGTTCACATTCTCTTGTATATTAATAATAATGTAGTTCGCTGGAACGTTTGCTGTGAGATCCCACATCGGTTGGGGAGAAGAATGAAATATTCTTTATAAGGGTGTGGAAACCTCCCCTGATAGACGCTTTTTAAAAATATTGTGGGAAAGCCCAGAAGAGAGTCCAAAGAGGGCAATATCTGCTAACAGTGGGTTTGGGCCATTACAAATGGTATTAGAGCAAAACACCGGGCGATGTGCTAGCGAGAAGATTGAGCCTCGAAAGGGGGTGGACACGAAGTGGTATGTTAGCAAGTATGCTGGGTCCCGAAGGGGAGTGGATTGGGGAGTCTCACATTGTTTGGGGAAGGGAACGAGTGCCAGCGACGACGTTGGCCCTGAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAATGAAACATTAGTTATAAGGGTGTGAAAATCTCCTCCTAGTAGACGCGATTTAAAAACCTTGAGGGAAAACCTGAAAGGAAAAGTCCAAAGAGGACAATATCTGCTAGTAGGCCGTTACATTTACGGTTGATTTCTCATGTACTTACTACATTTTCCTTATTTAGCACCTCTTTGTTTTTAATTTGCTGTATTTTTCATTACATTGTCCTAGAACTGCCATAGAAAATATGACTTGTTTGGACGTATGCCACTTGATCAGATAGAATCTATCATGAATGACTTCATACAGCTGAAGGCACTCTCCAACGTTGATGAGGCTGAAACCATGGTTGAAGGTTGACTTGCTTTGAAATTTACACCATTGTCAATTTCTCTAAATTGTTCTATCCTCATTCAATCTGCTTCATCTATAGGAACATTGGATGGCTTCTTATTTGATTCTGAAGATGAGGGCGAGAAAATAAGTAAAGTTCCAACAGACCAAAACGAGCCTGCCGAAGCGCTCAACAAAAAATCTAAAAATAAAGACGAAAAATCATCGGTATGTTTCTTTCTAAGCTTTGATATTCAATTGCTTATGTTATCTGTTGAATGAGTGTATGATTATGATCCGGAAATGGGCAATGTAGGGGCGGAAGCGTGTTAAAACAGGAGGAAAGGGGCAGGCACCCAAGAAAGCGAGGAAGAAAGTTCAAGGTTCTAAGACTAAAAGTACAAAGAGCAAGAAATGAGGTTTGAATTTTTGTTGTATGCTTATGAACCGAGGTGGTCAAATAGAGAACCCAACCCGACACGAGATTGAATTAATAACTTTTTGTCACTCTCTCTTCTCTGCGCGAGTGCGCGAGATTGAATTAATAATTGTAATGATGAAGTATGCTTTTCCATCGTTC

mRNA sequence

TTCCTCGGTGTTTGTGTTATTTCCTTTTATTTATTTTTAGAATAAAGAAAACCAAAATTTGAGGGAAAAAAAAAAGATCAAGCGGGCGCTGATTGAAATTTTGCCCCGTCCTACCTTTCTGGCGTTCCATTACATTTTCTGCTTCCGAAGGAGGAGGAAGATAGCGAGGAGGAGGGAGACAGCGCGCCGTCGTTTGTTCATTGTTTTTTTCCCATTACTCTGGTGCTGTCGTGCGGCCTCTCAAGATCAAATTTGAGGAGAGTGCTGGGGAAGAGCTTGGCAGTGGATCTCCAATCCAAGGATATTATTTGGCAGCGGCATGCTACTGTGGGAAGACCAGAAGACTTCTGAATTCGCTTGAAGGCCAAAATGAGCAGCTCGAGAGAGCAGTCTCCGGATTGGATGCGTTCTTTCCAAGCACCAACTAGTGCTGCCCTATCCTCTCATTCTGAATCTTCAACGAATGGTAGCTTATCAATGGGTGATTCAATTGATCAAAAGGGTCCATCTTCACTTAAAACCACACAAGATTCAGATGGAGATCAGATTCAAGGGGACAGTGACAACCATAATCTGGCAAAGGAAGTGAAACTTGAGGAACGTACAGGAAATGAAATCTCAAAGCAGTCAGTTTTGATGTTATCATCGGATTCTGAGTTATCGCCTGTTAATAGTTTTATAAAGGAGGATTATGGTCATCATGAAGAATTATCTGAACTTACGACATCTCACTTCCAAGGGAGAGGGAAGGATGAAAATGCAGGTGGAAAATCTAAATCAAGGAAAATATCAGATAAAAAGTTGTCAAAAAAACAGGTCAAATCAGAAGTTTGCACTTCGCCCGAAGAGAAGATAGTCATTTCTGATACAAATAAAGAACGACTTACGTTGGAAGGATCTGAATGCTATGTAAGCAATGGTGGAGATGTGGAGATCATAGAAAAAGATGCATTGGATGACTGCAACGAACGTCCTGTTTCCTCCTCAAGGTTGCCATTGGTGCTGTCTGACAAAGTTCAAAGATTGAAGGCACTTGTTGAGTGTGAAGGAAATTCAATAGATTTGAGTGGTGACATGGGTGCTGTAGGACGAATTGTAGTTTCTGATTCCTCATTTGCAAAAAATGAACTTTGCCTCGATTTGAAAGGTACAATTTATAGAGCGGCAGTAGTTCCTTCAAGGACATTTTGCGTTGTTAGCTTTGGTCAGTCGGAGGCGAAGATAGAATCTATCATGAATGACTTCATACAGCTGAAGGCACTCTCCAACGTTGATGAGGCTGAAACCATGGTTGAAGGAACATTGGATGGCTTCTTATTTGATTCTGAAGATGAGGGCGAGAAAATAAGTAAAGTTCCAACAGACCAAAACGAGCCTGCCGAAGCGCTCAACAAAAAATCTAAAAATAAAGACGAAAAATCATCGGGGCGGAAGCGTGTTAAAACAGGAGGAAAGGGGCAGGCACCCAAGAAAGCGAGGAAGAAAGTTCAAGGTTCTAAGACTAAAAGTACAAAGAGCAAGAAATGAGGTTTGAATTTTTGTTGTATGCTTATGAACCGAGGTGGTCAAATAGAGAACCCAACCCGACACGAGATTGAATTAATAACTTTTTGTCACTCTCTCTTCTCTGCGCGAGTGCGCGAGATTGAATTAATAATTGTAATGATGAAGTATGCTTTTCCATCGTTC

Coding sequence (CDS)

ATGAGCAGCTCGAGAGAGCAGTCTCCGGATTGGATGCGTTCTTTCCAAGCACCAACTAGTGCTGCCCTATCCTCTCATTCTGAATCTTCAACGAATGGTAGCTTATCAATGGGTGATTCAATTGATCAAAAGGGTCCATCTTCACTTAAAACCACACAAGATTCAGATGGAGATCAGATTCAAGGGGACAGTGACAACCATAATCTGGCAAAGGAAGTGAAACTTGAGGAACGTACAGGAAATGAAATCTCAAAGCAGTCAGTTTTGATGTTATCATCGGATTCTGAGTTATCGCCTGTTAATAGTTTTATAAAGGAGGATTATGGTCATCATGAAGAATTATCTGAACTTACGACATCTCACTTCCAAGGGAGAGGGAAGGATGAAAATGCAGGTGGAAAATCTAAATCAAGGAAAATATCAGATAAAAAGTTGTCAAAAAAACAGGTCAAATCAGAAGTTTGCACTTCGCCCGAAGAGAAGATAGTCATTTCTGATACAAATAAAGAACGACTTACGTTGGAAGGATCTGAATGCTATGTAAGCAATGGTGGAGATGTGGAGATCATAGAAAAAGATGCATTGGATGACTGCAACGAACGTCCTGTTTCCTCCTCAAGGTTGCCATTGGTGCTGTCTGACAAAGTTCAAAGATTGAAGGCACTTGTTGAGTGTGAAGGAAATTCAATAGATTTGAGTGGTGACATGGGTGCTGTAGGACGAATTGTAGTTTCTGATTCCTCATTTGCAAAAAATGAACTTTGCCTCGATTTGAAAGGTACAATTTATAGAGCGGCAGTAGTTCCTTCAAGGACATTTTGCGTTGTTAGCTTTGGTCAGTCGGAGGCGAAGATAGAATCTATCATGAATGACTTCATACAGCTGAAGGCACTCTCCAACGTTGATGAGGCTGAAACCATGGTTGAAGGAACATTGGATGGCTTCTTATTTGATTCTGAAGATGAGGGCGAGAAAATAAGTAAAGTTCCAACAGACCAAAACGAGCCTGCCGAAGCGCTCAACAAAAAATCTAAAAATAAAGACGAAAAATCATCGGGGCGGAAGCGTGTTAAAACAGGAGGAAAGGGGCAGGCACCCAAGAAAGCGAGGAAGAAAGTTCAAGGTTCTAAGACTAAAAGTACAAAGAGCAAGAAATGA

Protein sequence

MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQIQGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNEPAEALNKKSKNKDEKSSGRKRVKTGGKGQAPKKARKKVQGSKTKSTKSKK
Homology
[Close]
BLAST of Cp4.1LG01g17320 vs. Swiss-Prot
Match: BIN4_ARATH (DNA-binding protein BIN4 OS=Arabidopsis thaliana GN=BIN4 PE=1 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 2.9e-37
Identity = 149/387 (38.50%), Postives = 203/387 (52.45%), Query Frame = 1 

Query: 15  FQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQIQGDSDNHNLAKEVK 74
           F     A  S + E S  G  + G+++D +  SS         D +   S +   +  +K
Sbjct: 86  FSRKKKADASLNLEDSCAGKEN-GNNVDCEKLSSKHKDAQGGADSVWLVSSDSEPSSPIK 145

Query: 75  LEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGK 134
            E     E  K +  +L +  E   V +  KE     +  S   T   +G    E    +
Sbjct: 146 QEVTVSTE--KDADFVLEATEEEPAVKTVRKEKSPKTKSKSSRKTPK-EGNSAQEILKTE 205

Query: 135 SK------SRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVE 194
            K      + +++ +K  K + KS   T  EE        +E L  E  +    +     
Sbjct: 206 DKDTDTTIAEQVTPEKSPKTKSKSSRKTPKEENCA-----QEILKTEDKD---KDTDTDT 265

Query: 195 IIEKDALDDCNERPVS--SSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSD 254
           II ++   D   +P S  SSRLPLVLS+KV R K LVECEG+SIDLSGDMGAVGR+VVSD
Sbjct: 266 IIAEEVTTDQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSD 325

Query: 255 SSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAET 314
           ++    ++ LDLKGTIY++ ++PSRTFCVV+ GQ+EAKIE+IMNDFIQL   SNV EAET
Sbjct: 326 TT---GDMYLDLKGTIYKSTIIPSRTFCVVNVGQTEAKIEAIMNDFIQLIPQSNVYEAET 385

Query: 315 MVEGTLDGFLFDSEDEGEKISKV---PTDQN-----EPAEALNKKSKNKDEKSSGRKRVK 374
           MVEGTL+GF F+S+DE  K +K    P DQ+     E       K+K K E   G+KR +
Sbjct: 386 MVEGTLEGFTFESDDESNKNAKTAVKPADQSVGTEEETNTKAKPKAKAKGETVIGKKRGR 445

Query: 375 TGGKGQAPKKARKKVQGSKTKSTKSKK 386
              + Q P    KK + S  K  K+KK
Sbjct: 446 PSKEKQPP---AKKARNSAPKKPKAKK 454

[Close]
BLAST of Cp4.1LG01g17320 vs. TrEMBL
Match: A0A0A0LJZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338790 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 6.1e-135
Identity = 281/371 (75.74%), Postives = 306/371 (82.48%), Query Frame = 1 

Query: 12  MRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQIQGDSDNHNLAK 71
           MRSFQAPT  ALSS+S SS NGS SM ++IDQ+ PSS KTTQD DGDQIQGD  NHNLAK
Sbjct: 1   MRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAK 60

Query: 72  EVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENA 131
           EVKL+  TG+E SK SV MLS DSE    N+FIKEDY +HEEL+EL TS  QGR KDENA
Sbjct: 61  EVKLDRHTGHENSKHSVWMLSLDSESCSDNNFIKEDYSYHEELAELATSEIQGRRKDENA 120

Query: 132 G-----GKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECYVSNGGD 191
           G     GKSKSRK+S++   KK+VKSEVCTS +E I+ S TNK   T+EGSE +V N GD
Sbjct: 121 GRRFTEGKSKSRKVSNEMSPKKKVKSEVCTSAKENIMNSGTNKGGSTMEGSEGHVRN-GD 180

Query: 192 VEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSD 251
           VEI+EKDALDDC   PVSSSRLPLVLSDK  RLKALVECEG SIDLSGDMGAVGR+VVSD
Sbjct: 181 VEILEKDALDDCIGPPVSSSRLPLVLSDKAHRLKALVECEGTSIDLSGDMGAVGRVVVSD 240

Query: 252 SSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAET 311
           SS AKNELCLDLKGT+YRA +VPSRTFC+VSFGQSEAKIESIMNDFIQLKALS VDEAET
Sbjct: 241 SSSAKNELCLDLKGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAET 300

Query: 312 MVEGTLDGFLFDSEDEGEKISKV--PTDQNEPAEALNKKSKNKDEKSSGRKRVKTGGKGQ 371
           MVEGTLDGF FDSED+ EKI+K   P DQNEP E LN KSKNK EKSSGRKRVKTGG+ Q
Sbjct: 301 MVEGTLDGFSFDSEDDAEKITKAASPADQNEPVEGLNTKSKNKAEKSSGRKRVKTGGRLQ 360

Query: 372 APKKARKKVQG 376
           APKK RKKVQG
Sbjct: 361 APKKTRKKVQG 370

[Close]
BLAST of Cp4.1LG01g17320 vs. TrEMBL
Match: A0A0S3REG6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G172200 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66
Identity = 197/423 (46.57%), Postives = 258/423 (60.99%), Query Frame = 1 

Query: 1   MSSSREQSPDWMRSFQAPTSA--ALSSHSESSTNGSLSMGDSIDQKGPS-----SLKTTQ 60
           MSSSRE SPDW+RSFQ P+ +  ALSS S S  +G   + D  D +G S     SLK T 
Sbjct: 1   MSSSRESSPDWLRSFQVPSHSPLALSSDSGSLRDGKSRIEDKTDNEGSSPKSSQSLKVTG 60

Query: 61  DSDGDQIQGDSDNHNLAKEVKLEERTGNEISKQ---------------------SVLMLS 120
                 +  + ++  L+K  KL+++  NE +K+                     SVL LS
Sbjct: 61  SKRKTPVSPEVESQTLSKRKKLDKKKANEGNKEGKKSASESNIDKNIEHKGYIHSVLTLS 120

Query: 121 SDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAG-------GKSKSRKISDKKL 180
           SDSE    +S      G H +  ++ TS  Q  G++++A        GK  S+K S++K 
Sbjct: 121 SDSESFHDHS----PKGDHTD--QVKTSQPQLSGEEDSADGLVFRNVGKYPSKKGSEEKS 180

Query: 181 SKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSS 240
           S+KQ+ ++           S T  +   ++GSE   S+GGDV + E++     +E  VSS
Sbjct: 181 SQKQIDTD-----------SHTPVKGKKIKGSEKGKSSGGDVNVEEEETFGKLSESNVSS 240

Query: 241 SRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRA 300
           SRLPL+LS+KV R KAL+EC+G+SIDLSGDMGAVGRI++SDS     E+ LDLKGTIY+ 
Sbjct: 241 SRLPLMLSEKVHRTKALIECQGDSIDLSGDMGAVGRIIISDSPSGDQEMYLDLKGTIYKT 300

Query: 301 AVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFLFDSEDEGEK 360
           ++VPSRTFCVVSFGQSEAKIE+IMNDFIQLK  SNV EAETMVEGTLDGF FDS++E  K
Sbjct: 301 SIVPSRTFCVVSFGQSEAKIEAIMNDFIQLKPQSNVYEAETMVEGTLDGFFFDSDEEAGK 360

Query: 361 ISKV--PTDQNEPA-EALNKKSKNKDEKSSGRKRVK---TGGKGQAPKKARKKVQGSKTK 383
           + K    TDQ E   E  N KSK K +K+SG ++ +   TGG+ QA K A+KK  GSK  
Sbjct: 361 MQKSTNQTDQQENGEEQANGKSKGKADKTSGAEKKRGRNTGGRAQA-KVAKKKTPGSKRS 405

[Close]
BLAST of Cp4.1LG01g17320 vs. TrEMBL
Match: A0A0L9UDJ3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g117300 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66
Identity = 197/423 (46.57%), Postives = 258/423 (60.99%), Query Frame = 1 

Query: 1   MSSSREQSPDWMRSFQAPTSA--ALSSHSESSTNGSLSMGDSIDQKGPS-----SLKTTQ 60
           MSSSRE SPDW+RSFQ P+ +  ALSS S S  +G   + D  D +G S     SLK T 
Sbjct: 1   MSSSRESSPDWLRSFQVPSHSPLALSSDSGSLRDGKSRIEDKTDNEGSSPKSSQSLKVTG 60

Query: 61  DSDGDQIQGDSDNHNLAKEVKLEERTGNEISKQ---------------------SVLMLS 120
                 +  + ++  L+K  KL+++  NE +K+                     SVL LS
Sbjct: 61  SKRKTPVSPEVESQTLSKRKKLDKKKANEGNKEGKKSASESNIDKNIEHKGYIHSVLTLS 120

Query: 121 SDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAG-------GKSKSRKISDKKL 180
           SDSE    +S      G H +  ++ TS  Q  G++++A        GK  S+K S++K 
Sbjct: 121 SDSESFHDHS----PKGDHTD--QVKTSQPQLSGEEDSADGLVFRNVGKYPSKKGSEEKS 180

Query: 181 SKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSS 240
           S+KQ+ ++           S T  +   ++GSE   S+GGDV + E++     +E  VSS
Sbjct: 181 SQKQIDTD-----------SHTPVKGKKIKGSEKGKSSGGDVNVEEEETFGKLSESNVSS 240

Query: 241 SRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRA 300
           SRLPL+LS+KV R KAL+EC+G+SIDLSGDMGAVGRI++SDS     E+ LDLKGTIY+ 
Sbjct: 241 SRLPLMLSEKVHRTKALIECQGDSIDLSGDMGAVGRIIISDSPSGDQEMYLDLKGTIYKT 300

Query: 301 AVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFLFDSEDEGEK 360
           ++VPSRTFCVVSFGQSEAKIE+IMNDFIQLK  SNV EAETMVEGTLDGF FDS++E  K
Sbjct: 301 SIVPSRTFCVVSFGQSEAKIEAIMNDFIQLKPQSNVYEAETMVEGTLDGFFFDSDEEAGK 360

Query: 361 ISKV--PTDQNEPA-EALNKKSKNKDEKSSGRKRVK---TGGKGQAPKKARKKVQGSKTK 383
           + K    TDQ E   E  N KSK K +K+SG ++ +   TGG+ QA K A+KK  GSK  
Sbjct: 361 MQKSTNQTDQQENGEEQANGKSKGKADKTSGAEKKRGRNTGGRAQA-KVAKKKTPGSKRS 405

[Close]
BLAST of Cp4.1LG01g17320 vs. TrEMBL
Match: V7ASS2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G040200g PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 5.6e-64
Identity = 191/422 (45.26%), Postives = 250/422 (59.24%), Query Frame = 1 

Query: 1   MSSSREQSPDWMRSFQAPTSAAL--SSHSESSTNGSLSMGDSIDQKGPS-----SLKTTQ 60
           MSSSRE SPDW+RSFQ P+ + L  SS S S  +G     D  D +G S     SLK T+
Sbjct: 1   MSSSRESSPDWLRSFQVPSHSPLILSSDSGSLRDGGSRNEDKTDDEGSSPKSSQSLKITR 60

Query: 61  DSDGDQIQGDSDNHNLAKEVKLEERTGNEISKQ---------------------SVLMLS 120
                 +  + +N   +K  KL+++   E +K+                     S   LS
Sbjct: 61  RKRKTPVSPEVENQTPSKRKKLDKKNAKEGNKEEKKSVNESNINKHTEHKESIHSAWTLS 120

Query: 121 SDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGK--SKSRKISDKKLSKKQV 180
           SDSE    +S  +ED+       ++ TS  Q  G++++A G    K R    KK SK++ 
Sbjct: 121 SDSESFHDHSPKREDH-----TDQVETSQHQISGEEDSADGLVFGKDRNCPSKKGSKEK- 180

Query: 181 KSEVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPL 240
                +S ++  + S T  +   ++GS    S+GGDV + E++  +   E  VSS+RLPL
Sbjct: 181 -----SSQKQVDIDSHTPVKGKKIKGSAEKKSSGGDVNVEEEETFEKLAESDVSSTRLPL 240

Query: 241 VLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPS 300
           +LS+KV R KAL+EC+G+SIDLSGDMGAVGRI++SDS     E+ LDLKGTIY+ ++VPS
Sbjct: 241 MLSEKVHRTKALIECQGDSIDLSGDMGAVGRIIISDSPSGDQEMYLDLKGTIYKTSIVPS 300

Query: 301 RTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFLFDSEDEGEKISKVP 360
           RTFCVVSFGQSEAKIE+IMNDFIQLK   NV EAETMVEGTLDGF FDS++E  K S   
Sbjct: 301 RTFCVVSFGQSEAKIEAIMNDFIQLKPQFNVYEAETMVEGTLDGFFFDSDEEAGKKSTNQ 360

Query: 361 TDQNEPA-EALNKKSKNKDEKSSGRKRVK---TGGKGQA------PKKARKKVQGSKTKS 383
           TDQNE   E  N KSK K +K+SG ++ +   TGGK QA       K A+KK  GSK   
Sbjct: 361 TDQNENGEEQANGKSKGKADKTSGAEKKRGRNTGGKPQAKVGKPQAKIAKKKTPGSKRSK 411

[Close]
BLAST of Cp4.1LG01g17320 vs. TrEMBL
Match: A0A0D2RYE2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G126300 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.1e-62
Identity = 196/404 (48.51%), Postives = 237/404 (58.66%), Query Frame = 1 

Query: 1   MSSSREQSPDWMRSFQAPTSA-ALSSHSESSTNGSLSMGDSIDQKGPSSL------KTTQ 60
           M++SRE SPDW+RSFQAPTS   LSS S SS NGS    D  D     +L      K  Q
Sbjct: 1   MNNSRENSPDWLRSFQAPTSTLTLSSDSNSSPNGSPRRVDKTDADEEDTLEKRNHDKVKQ 60

Query: 61  DSDGDQ-------IQGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNS-FIK 120
              G +        +G  ++  +A E   E+  G+  +   +  LSSDSE  P +S   K
Sbjct: 61  KPSGKKKNDAFKDSEGSEEDGKVAMEEMSEKHLGSHAANHLIWTLSSDSESFPGHSPQRK 120

Query: 121 EDYGHHEELSELTTSHFQGRGKDENAGGKSKSRKISDKKLSKKQVKSEVCTSPEEKIVIS 180
           E     EE  E +     GR        +S  +K S  K  KK VK+   T  +EK V  
Sbjct: 121 EKVSLSEESGEASDPVLTGRAN------RSPLKKTSKGKSPKKGVKARGQTPKKEKNVKD 180

Query: 181 DTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVEC 240
           D                N  +VE  E +A +   E  VS+SRLPLVLS+KV R KALVEC
Sbjct: 181 DAK-----------ITENDVNVETAE-EAFEKHIEPHVSTSRLPLVLSEKVHRSKALVEC 240

Query: 241 EGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKI 300
           EG+SIDLSGDMGAVGRIVVS S+   +E+ LDLKGTIY+  +VP RTFC+VSFGQ+EAKI
Sbjct: 241 EGDSIDLSGDMGAVGRIVVSGSASENHEMFLDLKGTIYKTTIVPCRTFCIVSFGQTEAKI 300

Query: 301 ESIMNDFIQLKALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV---PTDQNEPAEA-LN 360
           E+IMNDFIQLK  SNV EAETMVEGTL+GF FDSEDE EK+ K     TDQNE  +  +N
Sbjct: 301 EAIMNDFIQLKPQSNVYEAETMVEGTLEGFSFDSEDEAEKMPKAIPHQTDQNEDIDGQMN 360

Query: 361 KKSKNKDEKSS--GRKRVKT-GGKGQAPKKARKKVQGSKTKSTK 383
            KSK + +K+S   RKR KT GGK Q  KKARKK    K K+ K
Sbjct: 361 GKSKGRADKTSMVSRKRGKTGGGKSQPAKKARKKAISKKPKAKK 386

[Close]
BLAST of Cp4.1LG01g17320 vs. TAIR10
Match: AT5G24630.6 (AT5G24630.6 double-stranded DNA binding)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-38
Identity = 149/387 (38.50%), Postives = 203/387 (52.45%), Query Frame = 1 

Query: 15  FQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQIQGDSDNHNLAKEVK 74
           F     A  S + E S  G  + G+++D +  SS         D +   S +   +  +K
Sbjct: 86  FSRKKKADASLNLEDSCAGKEN-GNNVDCEKLSSKHKDAQGGADSVWLVSSDSEPSSPIK 145

Query: 75  LEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGK 134
            E     E  K +  +L +  E   V +  KE     +  S   T   +G    E    +
Sbjct: 146 QEVTVSTE--KDADFVLEATEEEPAVKTVRKEKSPKTKSKSSRKTPK-EGNSAQEILKTE 205

Query: 135 SK------SRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVE 194
            K      + +++ +K  K + KS   T  EE        +E L  E  +    +     
Sbjct: 206 DKDTDTTIAEQVTPEKSPKTKSKSSRKTPKEENCA-----QEILKTEDKD---KDTDTDT 265

Query: 195 IIEKDALDDCNERPVS--SSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSD 254
           II ++   D   +P S  SSRLPLVLS+KV R K LVECEG+SIDLSGDMGAVGR+VVSD
Sbjct: 266 IIAEEVTTDQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSD 325

Query: 255 SSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAET 314
           ++    ++ LDLKGTIY++ ++PSRTFCVV+ GQ+EAKIE+IMNDFIQL   SNV EAET
Sbjct: 326 TT---GDMYLDLKGTIYKSTIIPSRTFCVVNVGQTEAKIEAIMNDFIQLIPQSNVYEAET 385

Query: 315 MVEGTLDGFLFDSEDEGEKISKV---PTDQN-----EPAEALNKKSKNKDEKSSGRKRVK 374
           MVEGTL+GF F+S+DE  K +K    P DQ+     E       K+K K E   G+KR +
Sbjct: 386 MVEGTLEGFTFESDDESNKNAKTAVKPADQSVGTEEETNTKAKPKAKAKGETVIGKKRGR 445

Query: 375 TGGKGQAPKKARKKVQGSKTKSTKSKK 386
              + Q P    KK + S  K  K+KK
Sbjct: 446 PSKEKQPP---AKKARNSAPKKPKAKK 454

[Close]
BLAST of Cp4.1LG01g17320 vs. NCBI nr
Match: gi|659121791|ref|XP_008460815.1| (PREDICTED: DNA-binding protein BIN4 isoform X2 [Cucumis melo])

HSP 1 Score: 525.0 bits (1351), Expect = 1.1e-145
Identity = 303/393 (77.10%), Postives = 329/393 (83.72%), Query Frame = 1 

Query: 1   MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI 60
           MSSSREQSPDWMRSFQAPT  ALSS+S SS NGS SM ++IDQ+ PSS KTTQD DGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGD  NHNLAKE KL+ RTG+E S+ SV MLSSDSE    N+FIKED  HHEELSEL TS
Sbjct: 61  QGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSESCSDNNFIKEDCNHHEELSELATS 120

Query: 121 HFQGRGKDENAG-----GKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLE 180
             QGR KDENAG     GKSKSRK+S +   KK++KS+VCTS +EKI+ SDTNK  LTLE
Sbjct: 121 EIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIKSQVCTSAKEKIINSDTNKGGLTLE 180

Query: 181 GSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGD 240
           GSE +V NG + EI+EKDALDDC   PVSSSRLPLVLSDKV RLKALVECEG SIDLSGD
Sbjct: 181 GSEGFVRNGEE-EILEKDALDDCIVPPVSSSRLPLVLSDKVHRLKALVECEGTSIDLSGD 240

Query: 241 MGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQL 300
           MGAVGR+VVSDSS AKNELCLDLKGT+YRA +VPSRTFC+VSFGQSEAKIESIMNDFIQL
Sbjct: 241 MGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQL 300

Query: 301 KALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV---PTDQNEPAEALNKKSKNKDEKSS 360
           KALS VDEAETMVEGTLDGF FDSEDE EKI+KV   P DQNEP E LN KSKNK EKSS
Sbjct: 301 KALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASSPADQNEPVEGLNTKSKNKAEKSS 360

Query: 361 GRKRVKTGGKGQAPKKARKKVQGSKTKSTKSKK 386
           GRKRVK+GG+ QAPKK RKKVQGSKTK+ KSKK
Sbjct: 361 GRKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK 392

[Close]
BLAST of Cp4.1LG01g17320 vs. NCBI nr
Match: gi|449459184|ref|XP_004147326.1| (PREDICTED: DNA-binding protein BIN4 [Cucumis sativus])

HSP 1 Score: 520.0 bits (1338), Expect = 3.5e-144
Identity = 300/392 (76.53%), Postives = 326/392 (83.16%), Query Frame = 1 

Query: 1   MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI 60
           MSSSREQSPDWMRSFQAPT  ALSS+S SS NGS SM ++IDQ+ PSS KTTQD DGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGD  NHNLAKEVKL+  TG+E SK SV MLS DSE    N+FIKEDY +HEEL+EL TS
Sbjct: 61  QGDCGNHNLAKEVKLDRHTGHENSKHSVWMLSLDSESCSDNNFIKEDYSYHEELAELATS 120

Query: 121 HFQGRGKDENAG-----GKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLE 180
             QGR KDENAG     GKSKSRK+S++   KK+VKSEVCTS +E I+ S TNK   T+E
Sbjct: 121 EIQGRRKDENAGRRFTEGKSKSRKVSNEMSPKKKVKSEVCTSAKENIMNSGTNKGGSTME 180

Query: 181 GSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGD 240
           GSE +V N GDVEI+EKDALDDC   PVSSSRLPLVLSDK  RLKALVECEG SIDLSGD
Sbjct: 181 GSEGHVRN-GDVEILEKDALDDCIGPPVSSSRLPLVLSDKAHRLKALVECEGTSIDLSGD 240

Query: 241 MGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQL 300
           MGAVGR+VVSDSS AKNELCLDLKGT+YRA +VPSRTFC+VSFGQSEAKIESIMNDFIQL
Sbjct: 241 MGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQL 300

Query: 301 KALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV--PTDQNEPAEALNKKSKNKDEKSSG 360
           KALS VDEAETMVEGTLDGF FDSED+ EKI+K   P DQNEP E LN KSKNK EKSSG
Sbjct: 301 KALSKVDEAETMVEGTLDGFSFDSEDDAEKITKAASPADQNEPVEGLNTKSKNKAEKSSG 360

Query: 361 RKRVKTGGKGQAPKKARKKVQGSKTKSTKSKK 386
           RKRVKTGG+ QAPKK RKKVQGSKTK+ KSKK
Sbjct: 361 RKRVKTGGRLQAPKKTRKKVQGSKTKNAKSKK 391

[Close]
BLAST of Cp4.1LG01g17320 vs. NCBI nr
Match: gi|659121789|ref|XP_008460814.1| (PREDICTED: DNA-binding protein BIN4 isoform X1 [Cucumis melo])

HSP 1 Score: 515.0 bits (1325), Expect = 1.1e-142
Identity = 303/408 (74.26%), Postives = 329/408 (80.64%), Query Frame = 1 

Query: 1   MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI 60
           MSSSREQSPDWMRSFQAPT  ALSS+S SS NGS SM ++IDQ+ PSS KTTQD DGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGD  NHNLAKE KL+ RTG+E S+ SV MLSSDSE    N+FIKED  HHEELSEL TS
Sbjct: 61  QGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSESCSDNNFIKEDCNHHEELSELATS 120

Query: 121 HFQGRGKDENAG-----GKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLE 180
             QGR KDENAG     GKSKSRK+S +   KK++KS+VCTS +EKI+ SDTNK  LTLE
Sbjct: 121 EIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIKSQVCTSAKEKIINSDTNKGGLTLE 180

Query: 181 GSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGD 240
           GSE +V N G+ EI+EKDALDDC   PVSSSRLPLVLSDKV RLKALVECEG SIDLSGD
Sbjct: 181 GSEGFVRN-GEEEILEKDALDDCIVPPVSSSRLPLVLSDKVHRLKALVECEGTSIDLSGD 240

Query: 241 MGAVGRIVVSDSSFAKNELCLDLK---------------GTIYRAAVVPSRTFCVVSFGQ 300
           MGAVGR+VVSDSS AKNELCLDLK               GT+YRA +VPSRTFC+VSFGQ
Sbjct: 241 MGAVGRVVVSDSSSAKNELCLDLKGKFHPNMLCFGSKRSGTLYRAVIVPSRTFCIVSFGQ 300

Query: 301 SEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV---PTDQNEPA 360
           SEAKIESIMNDFIQLKALS VDEAETMVEGTLDGF FDSEDE EKI+KV   P DQNEP 
Sbjct: 301 SEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASSPADQNEPV 360

Query: 361 EALNKKSKNKDEKSSGRKRVKTGGKGQAPKKARKKVQGSKTKSTKSKK 386
           E LN KSKNK EKSSGRKRVK+GG+ QAPKK RKKVQGSKTK+ KSKK
Sbjct: 361 EGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK 407

[Close]
BLAST of Cp4.1LG01g17320 vs. NCBI nr
Match: gi|700207116|gb|KGN62235.1| (hypothetical protein Csa_2G338790 [Cucumis sativus])

HSP 1 Score: 488.8 bits (1257), Expect = 8.7e-135
Identity = 281/371 (75.74%), Postives = 306/371 (82.48%), Query Frame = 1 

Query: 12  MRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQIQGDSDNHNLAK 71
           MRSFQAPT  ALSS+S SS NGS SM ++IDQ+ PSS KTTQD DGDQIQGD  NHNLAK
Sbjct: 1   MRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAK 60

Query: 72  EVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENA 131
           EVKL+  TG+E SK SV MLS DSE    N+FIKEDY +HEEL+EL TS  QGR KDENA
Sbjct: 61  EVKLDRHTGHENSKHSVWMLSLDSESCSDNNFIKEDYSYHEELAELATSEIQGRRKDENA 120

Query: 132 G-----GKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECYVSNGGD 191
           G     GKSKSRK+S++   KK+VKSEVCTS +E I+ S TNK   T+EGSE +V N GD
Sbjct: 121 GRRFTEGKSKSRKVSNEMSPKKKVKSEVCTSAKENIMNSGTNKGGSTMEGSEGHVRN-GD 180

Query: 192 VEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSD 251
           VEI+EKDALDDC   PVSSSRLPLVLSDK  RLKALVECEG SIDLSGDMGAVGR+VVSD
Sbjct: 181 VEILEKDALDDCIGPPVSSSRLPLVLSDKAHRLKALVECEGTSIDLSGDMGAVGRVVVSD 240

Query: 252 SSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAET 311
           SS AKNELCLDLKGT+YRA +VPSRTFC+VSFGQSEAKIESIMNDFIQLKALS VDEAET
Sbjct: 241 SSSAKNELCLDLKGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAET 300

Query: 312 MVEGTLDGFLFDSEDEGEKISKV--PTDQNEPAEALNKKSKNKDEKSSGRKRVKTGGKGQ 371
           MVEGTLDGF FDSED+ EKI+K   P DQNEP E LN KSKNK EKSSGRKRVKTGG+ Q
Sbjct: 301 MVEGTLDGFSFDSEDDAEKITKAASPADQNEPVEGLNTKSKNKAEKSSGRKRVKTGGRLQ 360

Query: 372 APKKARKKVQG 376
           APKK RKKVQG
Sbjct: 361 APKKTRKKVQG 370

[Close]
BLAST of Cp4.1LG01g17320 vs. NCBI nr
Match: gi|659121793|ref|XP_008460816.1| (PREDICTED: DNA-binding protein BIN4 isoform X3 [Cucumis melo])

HSP 1 Score: 465.3 bits (1196), Expect = 1.0e-127
Identity = 273/372 (73.39%), Postives = 298/372 (80.11%), Query Frame = 1 

Query: 37  MGDSIDQKGPSSLKTTQDSDGDQIQGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSE 96
           M ++IDQ+ PSS KTTQD DGDQIQGD  NHNLAKE KL+ RTG+E S+ SV MLSSDSE
Sbjct: 1   MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE 60

Query: 97  LSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAG-----GKSKSRKISDKKLSKKQVK 156
               N+FIKED  HHEELSEL TS  QGR KDENAG     GKSKSRK+S +   KK++K
Sbjct: 61  SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK 120

Query: 157 SEVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLV 216
           S+VCTS +EKI+ SDTNK  LTLEGSE +V N G+ EI+EKDALDDC   PVSSSRLPLV
Sbjct: 121 SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRN-GEEEILEKDALDDCIVPPVSSSRLPLV 180

Query: 217 LSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLK------------ 276
           LSDKV RLKALVECEG SIDLSGDMGAVGR+VVSDSS AKNELCLDLK            
Sbjct: 181 LSDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGKFHPNMLCFGS 240

Query: 277 ---GTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFL 336
              GT+YRA +VPSRTFC+VSFGQSEAKIESIMNDFIQLKALS VDEAETMVEGTLDGF 
Sbjct: 241 KRSGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFS 300

Query: 337 FDSEDEGEKISKV---PTDQNEPAEALNKKSKNKDEKSSGRKRVKTGGKGQAPKKARKKV 386
           FDSEDE EKI+KV   P DQNEP E LN KSKNK EKSSGRKRVK+GG+ QAPKK RKKV
Sbjct: 301 FDSEDEAEKITKVASSPADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKV 360

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g17320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BIN4_ARATH2.9e-3738.50DNA-binding protein BIN4 OS=Arabidopsis thaliana GN=BIN4 PE=1 SV=2[more]
BLAST of Cp4.1LG01g17320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJZ5_CUCSA6.1e-13575.74Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338790 PE=4 SV=1[more]
A0A0S3REG6_PHAAN1.2e-6646.57Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G172200 PE=... [more]
A0A0L9UDJ3_PHAAN1.2e-6646.57Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g117300 PE=4 SV=1[more]
V7ASS2_PHAVU5.6e-6445.26Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G040200g PE=4 SV=1[more]
A0A0D2RYE2_GOSRA1.1e-6248.51Uncharacterized protein OS=Gossypium raimondii GN=B456_004G126300 PE=4 SV=1[more]
BLAST of Cp4.1LG01g17320 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24630.61.6e-3838.50 double-stranded DNA binding[more]
BLAST of Cp4.1LG01g17320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121791|ref|XP_008460815.1|1.1e-14577.10PREDICTED: DNA-binding protein BIN4 isoform X2 [Cucumis melo][more]
gi|449459184|ref|XP_004147326.1|3.5e-14476.53PREDICTED: DNA-binding protein BIN4 [Cucumis sativus][more]
gi|659121789|ref|XP_008460814.1|1.1e-14274.26PREDICTED: DNA-binding protein BIN4 isoform X1 [Cucumis melo][more]
gi|700207116|gb|KGN62235.1|8.7e-13575.74hypothetical protein Csa_2G338790 [Cucumis sativus][more]
gi|659121793|ref|XP_008460816.1|1.0e-12773.39PREDICTED: DNA-binding protein BIN4 isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048856 anatomical structure development
biological_process GO:0044763 single-organism cellular process
biological_process GO:0044767 single-organism developmental process
biological_process GO:0030154 cell differentiation
biological_process GO:0016043 cellular component organization
biological_process GO:0042023 DNA endoreduplication
biological_process GO:0048731 system development
biological_process GO:0009888 tissue development
cellular_component GO:0005575 cellular_component
cellular_component GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)
molecular_function GO:0003674 molecular_function
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17320.1Cp4.1LG01g17320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34810FAMILY NOT NAMEDcoord: 1..384
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g17320CmoCh03G001850Cucurbita moschata (Rifu)cmocpeB617
Cp4.1LG01g17320Carg27659Silver-seed gourdcarcpeB0314
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g17320Melon (DHL92) v3.6.1cpemedB429
Cp4.1LG01g17320Wax gourdcpewgoB0540
Cp4.1LG01g17320Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g17320Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g17320Cucurbita maxima (Rimu)cmacpeB725
Cp4.1LG01g17320Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g17320Cucurbita moschata (Rifu)cmocpeB677
Cp4.1LG01g17320Cucurbita moschata (Rifu)cmocpeB680
Cp4.1LG01g17320Cucurbita moschata (Rifu)cmocpeB682
Cp4.1LG01g17320Cucurbita moschata (Rifu)cmocpeB686
Cp4.1LG01g17320Wild cucumber (PI 183967)cpecpiB453
Cp4.1LG01g17320Cucumber (Chinese Long) v2cpecuB448
Cp4.1LG01g17320Bottle gourd (USVL1VR-Ls)cpelsiB321
Cp4.1LG01g17320Melon (DHL92) v3.5.1cpemeB371