Cp4.1LG01g17100 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g17100
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG01 : 11306290 .. 11306714 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCCGATACCTTCTATTACCTAACTCTTGAAGCAATGTCCGTTGCAAACAAGCGGTTAAAGGCCGCGAACGACATGTCAGTGATCGCATAACAAGGGAATATCCTTATCGATTTCGTGACAACATTCACGATTCTGCCCCGGAATTTGTACAAAAGTGTCGCTACGACGTTGGCGCGTGTTGTTAAAGCGAAGCGAGTAGATGATTCGACTGGGGTTTTGGATCTTTGCTTCGCCCCGCGTAGCGTTGATGATTTGAATATTCCGGTCATTACGACGCGTTTTGCTGGCGGCACCGACGTGAAATTGTTACCGTTGAATACATTTGCAATGGTGGCAGATAATGTGGCTTGTTTGGCTTTACTTAGTGCAGGTGAACTTTTTGGTCGGATACAATCTCGAGCGCAAAAGATTGTCATTCAAATA

mRNA sequence

AACCCGATACCTTCTATTACCTAACTCTTGAAGCAATGTCCGTTGCAAACAAGCGGTTAAAGGCCGCGAACGACATTGTCGCTACGACGTTGGCGCGTGTTGTTAAAGCGAAGCGAGTAGATGATTCGACTGGGGTTTTGGATCTTTGCTTCGCCCCGCGTAGCGTTGATGATTTGAATATTCCGGTCATTACGACGCGTTTTGCTGGCGGCACCGACGTGAAATTGTTACCGTTGAATACATTTGCAATGGTGGCAGATAATGTGGCTTGTTTGGCTTTACTTAGTGCAGGTGAACTTTTTGGTCGGATACAATCTCGAGCGCAAAAGATTGTCATTCAAATA

Coding sequence (CDS)

ATGTCCGTTGCAAACAAGCGGTTAAAGGCCGCGAACGACATTGTCGCTACGACGTTGGCGCGTGTTGTTAAAGCGAAGCGAGTAGATGATTCGACTGGGGTTTTGGATCTTTGCTTCGCCCCGCGTAGCGTTGATGATTTGAATATTCCGGTCATTACGACGCGTTTTGCTGGCGGCACCGACGTGAAATTGTTACCGTTGAATACATTTGCAATGGTGGCAGATAATGTGGCTTGTTTGGCTTTACTTAGTGCAGGTGAACTTTTTGGTCGGATACAATCTCGAGCGCAAAAGATTGTCATTCAAATA

Protein sequence

MSVANKRLKAANDIVATTLARVVKAKRVDDSTGVLDLCFAPRSVDDLNIPVITTRFAGGTDVKLLPLNTFAMVADNVACLALLSAGELFGRIQSRAQKIVIQI
Homology
[Close]
BLAST of Cp4.1LG01g17100 vs. TrEMBL
Match: A0A0A0KZZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055410 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-18
Identity = 59/121 (48.76%), Postives = 72/121 (59.50%), Query Frame = 1 

Query: 1   MSVANKRLKAANDIVA---------------------------TTLARVVKAKRVDDSTG 60
           +SV  KR KAAN I A                           +TLARV+KAKRVDD +G
Sbjct: 290 ISVGKKRFKAANGISAMTNHGNIIIDSGTTLTLLPRSLYYGVFSTLARVIKAKRVDDPSG 349

Query: 61  VLDLCFAPRSVDDLNIPVITTRFAGGTDVKLLPLNTFAMVADNVACLALLSAGE--LFGR 93
           +L+LC++   VDDLNIP+IT  FAGG DVKLLP+NTFA VADNV CL    A +  +FG 
Sbjct: 350 ILELCYSAGQVDDLNIPIITAHFAGGADVKLLPVNTFAPVADNVTCLTFAPATQVAIFGN 409

[Close]
BLAST of Cp4.1LG01g17100 vs. TrEMBL
Match: A0A0A0KV20_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055400 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-11
Identity = 48/93 (51.61%), Postives = 57/93 (61.29%), Query Frame = 1 

Query: 9   KAANDIVATTLARVVKAKRVDDSTGVLDLCFAP--RSVDDLNIPVITTRFAGGTDVKLLP 68
           K   D V ++L +VVKAKRV D  G LDLCF     +   L IPVIT  F+GG +V LLP
Sbjct: 316 KELYDGVVSSLLKVVKAKRVKDPHGSLDLCFDDGINAAASLGIPVITAHFSGGANVNLLP 375

Query: 69  LNTFAMVADNVACLALLSAGEL--FGRIQSRAQ 98
           +NTF  VADNV CL L +A     FG I + AQ
Sbjct: 376 INTFRKVADNVNCLTLKAASPTTEFGIIGNLAQ 408

[Close]
BLAST of Cp4.1LG01g17100 vs. TrEMBL
Match: M5WRG3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025167mg PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.1e-09
Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 1 

Query: 12  NDIVATTLARVVKAKRVDDSTGVLDLCFAPRSVDDLNIPVITTRFAGGTDVKLLPLNTFA 71
           +D + + L   + A+RV D  G+L LCF  +S DD+ +PVIT  F+GG DVKL  LNTFA
Sbjct: 350 HDDLVSALETAINAERVSDPRGILSLCFKSKS-DDIGVPVITVHFSGGADVKLQALNTFA 409

Query: 72  MVADNVACLALLSAGE--LFGRI 93
            + D++ C  ++ + +  +FG +
Sbjct: 410 RMDDDMICFTMIPSSDVAIFGNL 431

[Close]
BLAST of Cp4.1LG01g17100 vs. TrEMBL
Match: A0A067KX75_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02613 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.8e-08
Identity = 33/80 (41.25%), Postives = 53/80 (66.25%), Query Frame = 1 

Query: 15  VATTLARVVKAKRVDDSTGVLDLCFAPRSVDDLNIPVITTRFAGGTDVKLLPLNTFAMVA 74
           +++ +  VVK  RVDD  G+L LC++  S+ ++++P +T  F+G  DVKL PLNTF  V+
Sbjct: 331 LSSAIDDVVKGTRVDDPNGILSLCYS--SISEVSLPTLTVHFSGA-DVKLNPLNTFVQVS 390

Query: 75  DNVACLAL--LSAGELFGRI 93
           D V CLA   + +G ++G +
Sbjct: 391 DGVVCLAFGSIESGAIYGNL 407

[Close]
BLAST of Cp4.1LG01g17100 vs. TrEMBL
Match: A0A0A0KX67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055390 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.5e-08
Identity = 38/79 (48.10%), Postives = 47/79 (59.49%), Query Frame = 1 

Query: 9   KAANDIVATTLARVVKAKRVDDSTGVLDLCFAP--RSVDDLNIPVITTRFAGGTDVKLLP 68
           K   D V ++L +VVKAKRV D     DLCF           IP+IT +F+GG +V LLP
Sbjct: 300 KELYDGVVSSLLKVVKAKRVKDPGNFWDLCFDDGINVATSSGIPIITAQFSGGANVNLLP 359

Query: 69  LNTFAMVADNVACLALLSA 86
           +NTF  VA+NV CL L  A
Sbjct: 360 VNTFQKVANNVNCLTLTPA 378

[Close]
BLAST of Cp4.1LG01g17100 vs. TAIR10
Match: AT1G64830.1 (AT1G64830.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 54.3 bits (129), Expect = 5.2e-08
Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 1 

Query: 17  TTLARVVKAKRVDDSTGVLDLCFAPRSVDDLNIPVITTRFAGGTDVKLLPLNTFAMVADN 76
           + +A  +KA+RV D  G+L LC+  R      +P IT  F GG DVKL  LNTF  V+++
Sbjct: 331 SVVASTIKAERVQDPDGILSLCY--RDSSSFKVPDITVHFKGG-DVKLGNLNTFVAVSED 390

Query: 77  VACLALLSAGEL--FGRI 93
           V+C A  +  +L  FG +
Sbjct: 391 VSCFAFAANEQLTIFGNL 405

[Close]
BLAST of Cp4.1LG01g17100 vs. TAIR10
Match: AT2G35615.1 (AT2G35615.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 47.8 bits (112), Expect = 4.8e-06
Identity = 25/67 (37.31%), Postives = 40/67 (59.70%), Query Frame = 1 

Query: 22  VVKAKRVDDSTGVLDLCFAPRSVDDLNIPVITTRFAGGTDVKLLPLNTFAMVADNVACLA 81
           V  AKRV D  G+L  CF   S + + +P IT  F G  DV+L P+N F  +++++ CL+
Sbjct: 350 VTGAKRVSDPQGLLSHCFKSGSAE-IGLPEITVHFTGA-DVRLSPINAFVKLSEDMVCLS 409

Query: 82  LLSAGEL 89
           ++   E+
Sbjct: 410 MVPTTEV 414

[Close]
BLAST of Cp4.1LG01g17100 vs. NCBI nr
Match: gi|449462551|ref|XP_004149004.1| (PREDICTED: probable aspartic protease At2g35615 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 1.8e-18
Identity = 59/121 (48.76%), Postives = 72/121 (59.50%), Query Frame = 1 

Query: 1   MSVANKRLKAANDIVA---------------------------TTLARVVKAKRVDDSTG 60
           +SV  KR KAAN I A                           +TLARV+KAKRVDD +G
Sbjct: 290 ISVGKKRFKAANGISAMTNHGNIIIDSGTTLTLLPRSLYYGVFSTLARVIKAKRVDDPSG 349

Query: 61  VLDLCFAPRSVDDLNIPVITTRFAGGTDVKLLPLNTFAMVADNVACLALLSAGE--LFGR 93
           +L+LC++   VDDLNIP+IT  FAGG DVKLLP+NTFA VADNV CL    A +  +FG 
Sbjct: 350 ILELCYSAGQVDDLNIPIITAHFAGGADVKLLPVNTFAPVADNVTCLTFAPATQVAIFGN 409

[Close]
BLAST of Cp4.1LG01g17100 vs. NCBI nr
Match: gi|659102472|ref|XP_008452150.1| (PREDICTED: probable aspartic protease At2g35615 [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 9.8e-17
Identity = 55/121 (45.45%), Postives = 71/121 (58.68%), Query Frame = 1 

Query: 1   MSVANKRLKAANDI---------------------------VATTLARVVKAKRVDDSTG 60
           +SV NKR KAA D+                           V +TLARV+K KRVDD +G
Sbjct: 290 ISVGNKRFKAAKDMSAMTNQGNIIIDSGTTLTLLPRSLYDGVVSTLARVIKTKRVDDPSG 349

Query: 61  VLDLCFAPRSVDDLNIPVITTRFAGGTDVKLLPLNTFAMVADNVACLALLSAGE--LFGR 93
           +L+LC++   ++DLNIP+IT  F+G  DVKLLP+NTFA VADNV CL L  A    +FG 
Sbjct: 350 ILELCYSAGQLEDLNIPIITAHFSGRADVKLLPVNTFAPVADNVICLTLAPATNVAIFGN 409

[Close]
BLAST of Cp4.1LG01g17100 vs. NCBI nr
Match: gi|778697533|ref|XP_004149005.2| (PREDICTED: probable aspartic protease At2g35615 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 2.8e-11
Identity = 48/93 (51.61%), Postives = 57/93 (61.29%), Query Frame = 1 

Query: 9   KAANDIVATTLARVVKAKRVDDSTGVLDLCFAP--RSVDDLNIPVITTRFAGGTDVKLLP 68
           K   D V ++L +VVKAKRV D  G LDLCF     +   L IPVIT  F+GG +V LLP
Sbjct: 316 KELYDGVVSSLLKVVKAKRVKDPHGSLDLCFDDGINAAASLGIPVITAHFSGGANVNLLP 375

Query: 69  LNTFAMVADNVACLALLSAGEL--FGRIQSRAQ 98
           +NTF  VADNV CL L +A     FG I + AQ
Sbjct: 376 INTFRKVADNVNCLTLKAASPTTEFGIIGNLAQ 408

[Close]
BLAST of Cp4.1LG01g17100 vs. NCBI nr
Match: gi|470131788|ref|XP_004301773.1| (PREDICTED: aspartic proteinase CDR1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-09
Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 1 

Query: 12  NDIVATTLARVVKAKRVDDSTGVLDLCFAPRSVDDLNIPVITTRFAGGTDVKLLPLNTFA 71
           +D V   L   + A+RV D  GVL LCF  +  DD+ +PVIT  F+GG DVKL  LNTFA
Sbjct: 326 HDDVVAALEAAINAERVSDPRGVLSLCFKSKK-DDIGVPVITAHFSGGADVKLNALNTFA 385

Query: 72  MVADNVACLALLSAGE--LFGRI 93
            V D++ C  ++ A +  +FG +
Sbjct: 386 RVEDDMVCFTMIPADDVAIFGNL 407

[Close]
BLAST of Cp4.1LG01g17100 vs. NCBI nr
Match: gi|645265299|ref|XP_008238084.1| (PREDICTED: aspartic proteinase CDR1-like [Prunus mume])

HSP 1 Score: 69.3 bits (168), Expect = 4.4e-09
Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 1 

Query: 12  NDIVATTLARVVKAKRVDDSTGVLDLCFAPRSVDDLNIPVITTRFAGGTDVKLLPLNTFA 71
           +D + + L   + A+RV D  G+L LCF  +S DD+ +PVIT  F+GG DVKL  LNTFA
Sbjct: 351 HDDLVSALETAINAERVSDPRGILSLCFKSKS-DDIGVPVITAHFSGGADVKLQALNTFA 410

Query: 72  MVADNVACLALLSAGE--LFGRI 93
            + D++ C  ++ + +  +FG +
Sbjct: 411 RMDDDMICFTMIPSSDVAIFGNL 432

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g17100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g17100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZZ3_CUCSA1.2e-1848.76Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055410 PE=3 SV=1[more]
A0A0A0KV20_CUCSA1.9e-1151.61Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055400 PE=3 SV=1[more]
M5WRG3_PRUPE3.1e-0940.96Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025167mg PE=3 SV=1[more]
A0A067KX75_JATCU5.8e-0841.25Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02613 PE=3 SV=1[more]
A0A0A0KX67_CUCSA7.5e-0848.10Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055390 PE=3 SV=1[more]
BLAST of Cp4.1LG01g17100 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G64830.15.2e-0841.03 Eukaryotic aspartyl protease family protein[more]
AT2G35615.14.8e-0637.31 Eukaryotic aspartyl protease family protein[more]
BLAST of Cp4.1LG01g17100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462551|ref|XP_004149004.1|1.8e-1848.76PREDICTED: probable aspartic protease At2g35615 [Cucumis sativus][more]
gi|659102472|ref|XP_008452150.1|9.8e-1745.45PREDICTED: probable aspartic protease At2g35615 [Cucumis melo][more]
gi|778697533|ref|XP_004149005.2|2.8e-1151.61PREDICTED: probable aspartic protease At2g35615 [Cucumis sativus][more]
gi|470131788|ref|XP_004301773.1|1.2e-0944.58PREDICTED: aspartic proteinase CDR1 [Fragaria vesca subsp. vesca][more]
gi|645265299|ref|XP_008238084.1|4.4e-0940.96PREDICTED: aspartic proteinase CDR1-like [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0004190aspartic-type endopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom_sf
IPR001461Aspartic_peptidase_A1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0004190 aspartic-type endopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17100.1Cp4.1LG01g17100.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001461Aspartic peptidase A1 familyPANTHERPTHR13683ASPARTYL PROTEASEScoord: 14..84
score: 1.1
IPR021109Aspartic peptidase domainGENE3DG3DSA:2.40.70.10coord: 13..87
score: 4.
IPR021109Aspartic peptidase domainunknownSSF50630Acid proteasescoord: 14..86
score: 2.9
NoneNo IPR availablePANTHERPTHR13683:SF298ASPARTIC PROTEINASE CDR1-RELATEDcoord: 14..84
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g17100Wax gourdcpewgoB0540
Cp4.1LG01g17100Wax gourdcpewgoB0559
Cp4.1LG01g17100Cucumber (Gy14) v1cgycpeB0524
Cp4.1LG01g17100Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g17100Cucurbita maxima (Rimu)cmacpeB725
Cp4.1LG01g17100Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g17100Cucurbita moschata (Rifu)cmocpeB677
Cp4.1LG01g17100Cucurbita moschata (Rifu)cmocpeB680
Cp4.1LG01g17100Cucurbita moschata (Rifu)cmocpeB682
Cp4.1LG01g17100Cucurbita moschata (Rifu)cmocpeB686
Cp4.1LG01g17100Wild cucumber (PI 183967)cpecpiB458
Cp4.1LG01g17100Cucumber (Chinese Long) v2cpecuB449
Cp4.1LG01g17100Cucumber (Chinese Long) v2cpecuB453
Cp4.1LG01g17100Bottle gourd (USVL1VR-Ls)cpelsiB319
Cp4.1LG01g17100Bottle gourd (USVL1VR-Ls)cpelsiB321
Cp4.1LG01g17100Watermelon (Charleston Gray)cpewcgB362
Cp4.1LG01g17100Watermelon (Charleston Gray)cpewcgB365
Cp4.1LG01g17100Watermelon (97103) v1cpewmB469
Cp4.1LG01g17100Watermelon (97103) v1cpewmB455
Cp4.1LG01g17100Melon (DHL92) v3.5.1cpemeB371
Cp4.1LG01g17100Cucumber (Gy14) v2cgybcpeB663
Cp4.1LG01g17100Cucumber (Gy14) v2cgybcpeB664
Cp4.1LG01g17100Melon (DHL92) v3.6.1cpemedB429
Cp4.1LG01g17100Cucumber (Chinese Long) v3cpecucB0557
Cp4.1LG01g17100Cucumber (Chinese Long) v3cpecucB0560