Cp4.1LG01g17080 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTGACCTCGAGGGAGGGTATTATGATGCTGGAGACAACGTCAAGTACGGCCTTCCCATGGCTTTCACCGTCACTACTCTTGCATGGGCTGCTTTGGCTTACCCCGCCGAGACCCAAGCCGCCGGTGAAATGGAAAATCTTAAAGCTGCCATCCAATGGGGTACCGATTATCTTCTCAAGGCTTCTTCCCGTCGCAATCGTTTCTATGTCGAGGTATGCATGAATTTTGAATGATTCTCTGATACCATGTTAATGTTATGAATGAAAAATAAATTATTTTTTTATTCAAGGTGGGGGACCCAGTTAAGGATCATGAGTGTTGGGTTAGGCCTGAAAATATGAAGACTCCCAGGACTGTGCTGCAAATTGATCGTACCACTCCGGGTACTGAAATTGCTGCTGAAACCTCTGCAGCTATGGCTTCTTCTTCCATCGTCTTTAGAAACTCTAATCGAACCTATTCTCGTCGTCTTCTCAACAAAGCTAAAACGGTATAAACTCTTTAACCTCATTCTGTGTCGATTCGTTTGTTCATTCCTTCGTTCATTGACATAGCTGGTTTTGTTTTTCTTTGCAGCTTTTTCAGTTTGCTAAAATGAACCAGGGAACTTATGATGGAGAGTGCCCTTTCTATTGCTCTTACTCCGGCTACAATGTAATTTTCCTTCTTTCTTTTTCTTAGTCGTATTGTGTCCGCCTCTTCGAATAATTTACTAGTCACCTCTTAAGAGCTTTGAATTATGGTTTGATGGATATATCATATTTGATCCTTTATTATCAAATGTTTTGTATGATATTTAATCTTTTATTACAGTCAAATATCTGTATCGTGACCATTGAAATGACTAGAAAAGATATATGATTAATCTTGTTGTGTCGGGCTGTTTGAATAATTTACGAGTTACGGGTGTAGGATGAGTTGTTGTGGGCTGCTACATGGCTATACATTGCAACGAGGAGGCCAGCTTATTTTAAGTACATTACAGAAGAGTCTGTTAGTGGCAGTGTAGCTGAATTCAGCTGGGATCTCAAATATGCTGGCGCTCAAATTCTTCTTTCCGAGGTTCTTTATAATGTTTTTAATACCCATTTCATCAATTTACATATCGTATTTCTCATCCTTCAAAACACCCACAGATCTATTTTCAAGGAGAGAAGGGTTTACAGATGTACAAAAATCAGGCCGATAGCTATATTTGTTCCAATCTTCCAAACAGCCCTTACCACCAAATTTATCTATCTCCAGGTCTTTTATCTCTCTCTCTCTCTCTCTCTCTCTTCTCCTCTATGTTTATCAATGAATTCAAGTATGGAGCTAAGTTACTACTTGAAATTCTTAGGTGGAATGGTTCACATGAGAGATGGAGCCAACACGCAATACGTTACCGGAACCGCGTTCTTGTTTAGTGCTTATAGCGATATCCTTGCCACCCATCAACAAACGGTTCAATGCGGCGGTCAGCAGTTCGGCTCAGCTCAACTCATGACCTTTGCCAAGAAACAGGTACTCTCCTGTTATAATAGTATGATATTGTTCACTTTGAGTATAAACTCTCGTATGTATTCAAACACGCTTAAGTAGCAAATGTGAGATTCTTTTCCTAACAATCCTCCCATCGGACAAAGTACCCCATAGAGCCTCTCCGAAGGCCTATGGAGCCTTCGAACAGCCTCACCTTAATCGAGACTTGATTCCTTCTTTAGAGCATTTGAACAAAGTATACCATTTATTCGACAGTTGAATCACTTTTGATTGTGTCATTGAAGCTCACAACTTCTTTGTTTAACATTTGATGATTCATGTACCATGTTAGGAATCACGGACCTCCACAATTGTATGATGTTGTTCACTTTGAGTATAAATTCTCGTGATTTAATCAAATAGACATCGTACGTAAACTCGTAATCAAACCCTTTAATTAGCTCACTCATGATTGAAGAGTAAAATATTTAATTTTTTTTTAGATGGATTACCTGTTGGGGAACAACCCACAGGGGAGATCGTACATGGTGGGGTTTGGGAACAACCCACCGACGCAGGCGCACCATCGCGGCGCGTCGGTGCCGGTGATGCCAGACAACGCAGAAGTGAACTGCGCGATGAGTTTCGTGTACTGGCTGAACAACGACACGCCGAACCCCAACGAGCTAACCGGCGCAATTCTGGGCGGCCCCGACCGCAGTGACAACTTCCTGGACAAGCGTGTGGTGTCACCCATGACCGAGCCCGTGACTTACACAAACTCCCTCGCCGTTGGAGTCCTCGCAAAGCTGGCCGCCAACAGGTTCACCTGAAAAATCAATTCCCGAGAACATACCTTATTTAGGCGTTTTTTAGTTGCTTCTTCTTAGGACAGTACAGGCTAAGCTAAGCTGGGTAGATTTTCCCTTACGGGGAGGGGACGATGTGATTGGTCTTTCTAGAAAGTAGAGCTTATGAGATTTGGGGATTTCAAGAC GTTGACCTCGAGGGAGGGTATTATGATGCTGGAGACAACGTCAAGTACGGCCTTCCCATGGCTTTCACCGTCACTACTCTTGCATGGGCTGCTTTGGCTTACCCCGCCGAGACCCAAGCCGCCGGTGAAATGGAAAATCTTAAAGCTGCCATCCAATGGGGTACCGATTATCTTCTCAAGGCTTCTTCCCGTCGCAATCGTTTCTATGTCGAGGTGGGGGACCCAGTTAAGGATCATGAGTGTTGGGTTAGGCCTGAAAATATGAAGACTCCCAGGACTGTGCTGCAAATTGATCGTACCACTCCGGGTACTGAAATTGCTGCTGAAACCTCTGCAGCTATGGCTTCTTCTTCCATCGTCTTTAGAAACTCTAATCGAACCTATTCTCGTCGTCTTCTCAACAAAGCTAAAACGCTTTTTCAGTTTGCTAAAATGAACCAGGGAACTTATGATGGAGAGTGCCCTTTCTATTGCTCTTACTCCGGCTACAATATGGATTACCTGTTGGGGAACAACCCACAGGGGAGATCGTACATGGTGGGGTTTGGGAACAACCCACCGACGCAGGCGCACCATCGCGGCGCGTCGGTGCCGGTGATGCCAGACAACGCAGAAGTGAACTGCGCGATGAGTTTCGTGTACTGGCTGAACAACGACACGCCGAACCCCAACGAGCTAACCGGCGCAATTCTGGGCGGCCCCGACCGCAGTGACAACTTCCTGGACAAGCGTGTGGTGTCACCCATGACCGAGCCCGTGACTTACACAAACTCCCTCGCCGTTGGAGTCCTCGCAAAGCTGGCCGCCAACAGGTTCACCTGAAAAATCAATTCCCGAGAACATACCTTATTTAGGCGTTTTTTAGTTGCTTCTTCTTAGGACAGTACAGGCTAAGCTAAGCTGGGTAGATTTTCCCTTACGGGGAGGGGACGATGTGATTGGTCTTTCTAGAAAGTAGAGCTTATGAGATTTGGGGATTTCAAGAC GTTGACCTCGAGGGAGGGTATTATGATGCTGGAGACAACGTCAAGTACGGCCTTCCCATGGCTTTCACCGTCACTACTCTTGCATGGGCTGCTTTGGCTTACCCCGCCGAGACCCAAGCCGCCGGTGAAATGGAAAATCTTAAAGCTGCCATCCAATGGGGTACCGATTATCTTCTCAAGGCTTCTTCCCGTCGCAATCGTTTCTATGTCGAGGTGGGGGACCCAGTTAAGGATCATGAGTGTTGGGTTAGGCCTGAAAATATGAAGACTCCCAGGACTGTGCTGCAAATTGATCGTACCACTCCGGGTACTGAAATTGCTGCTGAAACCTCTGCAGCTATGGCTTCTTCTTCCATCGTCTTTAGAAACTCTAATCGAACCTATTCTCGTCGTCTTCTCAACAAAGCTAAAACGCTTTTTCAGTTTGCTAAAATGAACCAGGGAACTTATGATGGAGAGTGCCCTTTCTATTGCTCTTACTCCGGCTACAATATGGATTACCTGTTGGGGAACAACCCACAGGGGAGATCGTACATGGTGGGGTTTGGGAACAACCCACCGACGCAGGCGCACCATCGCGGCGCGTCGGTGCCGGTGATGCCAGACAACGCAGAAGTGAACTGCGCGATGAGTTTCGTGTACTGGCTGAACAACGACACGCCGAACCCCAACGAGCTAACCGGCGCAATTCTGGGCGGCCCCGACCGCAGTGACAACTTCCTGGACAAGCGTGTGGTGTCACCCATGACCGAGCCCGTGACTTACACAAACTCCCTCGCCGTTGGAGTCCTCGCAAAGCTGGCCGCCAACAGGTTCACCTGA VDLEGGYYDAGDNVKYGLPMAFTVTTLAWAALAYPAETQAAGEMENLKAAIQWGTDYLLKASSRRNRFYVEVGDPVKDHECWVRPENMKTPRTVLQIDRTTPGTEIAAETSAAMASSSIVFRNSNRTYSRRLLNKAKTLFQFAKMNQGTYDGECPFYCSYSGYNMDYLLGNNPQGRSYMVGFGNNPPTQAHHRGASVPVMPDNAEVNCAMSFVYWLNNDTPNPNELTGAILGGPDRSDNFLDKRVVSPMTEPVTYTNSLAVGVLAKLAANRFT
BLAST of Cp4.1LG01g17080 vs. Swiss-Prot
Match: GUN16_ARATH (Endoglucanase 16 OS=Arabidopsis thaliana GN=At3g43860 PE=2 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.7e-66 Identity = 117/164 (71.34%), Postives = 137/164 (83.54%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. Swiss-Prot
Match: GUN8_ORYSJ (Endoglucanase 8 OS=Oryza sativa subsp. japonica GN=Os02g0778600 PE=2 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 7.9e-66 Identity = 119/168 (70.83%), Postives = 144/168 (85.71%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. Swiss-Prot
Match: GUN_PHAVU (Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2) HSP 1 Score: 194.5 bits (493), Expect = 1.5e-48 Identity = 88/168 (52.38%), Postives = 123/168 (73.21%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. Swiss-Prot
Match: GUN3_ORYSJ (Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 3.3e-48 Identity = 89/175 (50.86%), Postives = 131/175 (74.86%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. Swiss-Prot
Match: GUN17_ARATH (Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 2.2e-47 Identity = 91/175 (52.00%), Postives = 127/175 (72.57%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. TrEMBL
Match: A0A0A0KDJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G361400 PE=3 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 3.8e-75 Identity = 136/165 (82.42%), Postives = 153/165 (92.73%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. TrEMBL
Match: A0A061GKW7_THECC (Glycosyl hydrolase 9A4 isoform 1 OS=Theobroma cacao GN=TCM_037400 PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.2e-71 Identity = 129/168 (76.79%), Postives = 152/168 (90.48%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. TrEMBL
Match: A0A0V0IDB1_SOLCH (Putative endoglucanase 16-like OS=Solanum chacoense PE=3 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 9.7e-71 Identity = 128/168 (76.19%), Postives = 151/168 (89.88%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. TrEMBL
Match: M1BTX6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401020473 PE=3 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 9.7e-71 Identity = 128/168 (76.19%), Postives = 151/168 (89.88%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. TrEMBL
Match: W9RHN2_9ROSA (Endoglucanase 16 OS=Morus notabilis GN=L484_018610 PE=3 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 1.3e-70 Identity = 129/168 (76.79%), Postives = 150/168 (89.29%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. TAIR10
Match: AT3G43860.1 (AT3G43860.1 glycosyl hydrolase 9A4) HSP 1 Score: 253.4 bits (646), Expect = 1.5e-67 Identity = 117/164 (71.34%), Postives = 137/164 (83.54%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. TAIR10
Match: AT4G02290.1 (AT4G02290.1 glycosyl hydrolase 9B13) HSP 1 Score: 190.7 bits (483), Expect = 1.2e-48 Identity = 91/175 (52.00%), Postives = 127/175 (72.57%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. TAIR10
Match: AT4G23560.1 (AT4G23560.1 glycosyl hydrolase 9B15) HSP 1 Score: 188.0 bits (476), Expect = 7.9e-48 Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. TAIR10
Match: AT1G02800.1 (AT1G02800.1 cellulase 2) HSP 1 Score: 186.8 bits (473), Expect = 1.8e-47 Identity = 95/196 (48.47%), Postives = 128/196 (65.31%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. TAIR10
Match: AT4G09740.1 (AT4G09740.1 glycosyl hydrolase 9B14) HSP 1 Score: 185.3 bits (469), Expect = 5.1e-47 Identity = 85/168 (50.60%), Postives = 119/168 (70.83%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. NCBI nr
Match: gi|659089503|ref|XP_008445544.1| (PREDICTED: endoglucanase 16 [Cucumis melo]) HSP 1 Score: 293.5 bits (750), Expect = 3.8e-76 Identity = 139/168 (82.74%), Postives = 153/168 (91.07%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. NCBI nr
Match: gi|449453059|ref|XP_004144276.1| (PREDICTED: endoglucanase 16 [Cucumis sativus]) HSP 1 Score: 290.0 bits (741), Expect = 4.2e-75 Identity = 137/168 (81.55%), Postives = 154/168 (91.67%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. NCBI nr
Match: gi|700192374|gb|KGN47578.1| (hypothetical protein Csa_6G361400 [Cucumis sativus]) HSP 1 Score: 289.7 bits (740), Expect = 5.5e-75 Identity = 136/165 (82.42%), Postives = 153/165 (92.73%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. NCBI nr
Match: gi|698441458|ref|XP_009761673.1| (PREDICTED: endoglucanase 16, partial [Nicotiana sylvestris]) HSP 1 Score: 282.0 bits (720), Expect = 1.1e-72 Identity = 130/168 (77.38%), Postives = 154/168 (91.67%), Query Frame = 1
BLAST of Cp4.1LG01g17080 vs. NCBI nr
Match: gi|697146836|ref|XP_009627568.1| (PREDICTED: endoglucanase 16 [Nicotiana tomentosiformis]) HSP 1 Score: 278.5 bits (711), Expect = 1.3e-71 Identity = 128/168 (76.19%), Postives = 152/168 (90.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |