Cp4.1LG01g16910 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g16910
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Short-chain dehydrogenase, putative
Location	Cp4.1LG01 : 10882439 .. 10883766 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TACACTAAATTAGGTATTCGCTTTGGAGAAGACAAATCCATGGCTGCAACCAAGAAGACAGTTCTAATAACTGGGGTGTCCAGAGGGATAGGACGAGCTTTGGCATTGGAGTTGGCAAAACATGGCCATCTAATTATTGGTTGCGGCCGCCACAAAACCAATTTGGATTCACTTCAGCTGCAACTCTCTAATGCTTCCCCACAAAACCATTTGCTCTTCATTGCTGATGTGGTTCGTAATGCTTTTTCCTTTGCTATGTCTTATTGTTTATCTGTTTAATTTCTCCTTTTTGTTTTGCAGAAGTCAGATGACAGCATCCGACAAATGGCACACACGGTCCGAGACAAACTTGGTTCTCTTGACATCATTGGTATGTTTGTGCTACAGTTTTTTTTTTTCTTTTTTTTTTTTTTCATTTTGGATAAAATAAAGTAAACACGAAGTTCATGATATAAACCAAGAGACATCAATCATACAATATACTTCGACGAGCATAGAAAGAAAATGTTGTTGAAATTATCAAAAAAAATATTTCAATTCATGCCACATCCAATGAGAATCAAGTTTCATTGTTATGAATTCTGGGTGGATCATAATTTAGAATTATAACGTTTATTTAATATATTTTAAGGCTTATTTACATAATCGTTAATTATGATTATAAAGTATACAGTAGAGTGGTGGCTAATTATGATCATAAATAGTTACAACTTTTGGAATGTCTCACGGAAGGTTAAGAATTTTTATTTTGACCCTATATAAAATGATGTATGTTATATTTGTAAAAGAGACTTGTAAAATGTAGTGAAAGAATCATTTGTGCTGGCTAAGTTTTTTTTGCAATTCTATGTAGTTTAGGTTGCATGTAGAGTCATTCAAGCTCGACATGATCAATCTTGCTTGTGTAGTAATTCGAATCTTAAACAAGTGTTCTTGCCATGAGATATTTGATCAACAATAATCATTCAAGCTAGACATGATCGATCTTGTTTGTGGAGTGATTTGAATCTCAAATAAGTGTCTTGCCTTAGATGTTCGATCAACAAGTAATCCAAATCTTACTTCTCTTATAGTGATTTCTTATCATTTTTTTTTTTTTTTCTGCAGTGAATAATGCAGGTGTGAATACTGCGAATTTGAAGTTTTGGGAGGTTCCTGACGAAATGTTTGATAATGTAATCGACACAAACATAAAAGGGGCAGCAAATGTGTTGCGTCACTTCATTCCTCTTATGCTTCCTAGGAATCAAGGAATTATTGTGAACATATCTTCTCTGTATGGAAGAACTGTTGGTCCCCTGGTACGCATATGCTGCAATCTATATTAA

mRNA sequence

TACACTAAATTAGGTATTCGCTTTGGAGAAGACAAATCCATGGCTGCAACCAAGAAGACAGTTCTAATAACTGGGGTGTCCAGAGGGATAGGACGAGCTTTGGCATTGGAGTTGGCAAAACATGGCCATCTAATTATTGGTTGCGGCCGCCACAAAACCAATTTGGATTCACTTCAGCTGCAACTCTCTAATGCTTCCCCACAAAACCATTTGCTCTTCATTGCTGATGTGAAGTCAGATGACAGCATCCGACAAATGGCACACACGGTCCGAGACAAACTTGGTTCTCTTGACATCATTGGGGCAGCAAATGTGTTGCGTCACTTCATTCCTCTTATGCTTCCTAGGAATCAAGGAATTATTGTGAACATATCTTCTCTGTATGGAAGAACTGTTGGTCCCCTGGTACGCATATGCTGCAATCTATATTAA

Coding sequence (CDS)

ATGGCTGCAACCAAGAAGACAGTTCTAATAACTGGGGTGTCCAGAGGGATAGGACGAGCTTTGGCATTGGAGTTGGCAAAACATGGCCATCTAATTATTGGTTGCGGCCGCCACAAAACCAATTTGGATTCACTTCAGCTGCAACTCTCTAATGCTTCCCCACAAAACCATTTGCTCTTCATTGCTGATGTGAAGTCAGATGACAGCATCCGACAAATGGCACACACGGTCCGAGACAAACTTGGTTCTCTTGACATCATTGGGGCAGCAAATGTGTTGCGTCACTTCATTCCTCTTATGCTTCCTAGGAATCAAGGAATTATTGTGAACATATCTTCTCTGTATGGAAGAACTGTTGGTCCCCTGGTACGCATATGCTGCAATCTATATTAA

Protein sequence

MAATKKTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFIADVKSDDSIRQMAHTVRDKLGSLDIIGAANVLRHFIPLMLPRNQGIIVNISSLYGRTVGPLVRICCNLY

Homology

[Close]

BLAST of Cp4.1LG01g16910 vs. Swiss-Prot
Match: PTALR_ARATH (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.9e-26
Identity = 72/152 (47.37%), Postives = 92/152 (60.53%), Query Frame = 1


Query: 6   KTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFIADVK 65
           +TVLITGVS+G+GRALALELAK GH +IGC R +  L +LQ +LS+++  NHLL  ADVK
Sbjct: 18  RTVLITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQSELSSST--NHLLLTADVK 77

Query: 66  SDDSIRQMAHTVRDKLGSLDII--GAANVLR----------------------------H 125
           S+ S+ +MAHT+ +K G  DII   A  + +                            H
Sbjct: 78  SNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFDNVMDTNVKGVANVLRH 137

Query: 126 FIPLMLPRNQGIIVNISSLYGRTVGPLVRICC 128
           FIPLMLPR QGIIVN+SS +GR+   LV   C
Sbjct: 138 FIPLMLPRKQGIIVNMSSGWGRSGAALVAPYC 167

[Close]

BLAST of Cp4.1LG01g16910 vs. Swiss-Prot
Match: YOXD_BACSU (Uncharacterized oxidoreductase YoxD OS=Bacillus subtilis (strain 168) GN=yoxD PE=3 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 9.5e-09
Identity = 47/141 (33.33%), Postives = 63/141 (44.68%), Query Frame = 1


Query: 6   KTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFIADVK 65
           KT LITG  RGIGRA AL LAK G  I   GR   N++ +  ++  A         ADVK
Sbjct: 7   KTALITGGGRGIGRATALALAKEGVNIGLIGRTSANVEKVAEEV-KALGVKAAFAAADVK 66

Query: 66  SDDSIRQMAHTVRDKLGSLDII-----------------------------GAANVLRHF 118
             D + Q    V+++LG +DI+                             G  +V R  
Sbjct: 67  DADQVNQAVAQVKEQLGDIDILINNAGISKFGGFLDLSADEWENIIQVNLMGVYHVTRAV 126

[Close]

BLAST of Cp4.1LG01g16910 vs. Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=fabG PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.0e-06
Identity = 39/140 (27.86%), Postives = 61/140 (43.57%), Query Frame = 1


Query: 6   KTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFIADVK 65
           K  LITG + GIG+A  L  A+ G  +I     K NLDSL ++ +   P     ++ +V 
Sbjct: 6   KVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSL-VKEAEGLPGKVDPYVLNVT 65

Query: 66  SDDSIRQMAHTVRDKLGSLDII-----------------------------GAANVLRHF 117
             D I+++   V  K G +D++                             G  NV +  
Sbjct: 66  DRDQIKEVVEKVVQKYGRIDVLVNNAGITRDALLVRMKEEDWDAVINVNLKGVFNVTQMV 125

[Close]

BLAST of Cp4.1LG01g16910 vs. Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.4e-06
Identity = 38/146 (26.03%), Postives = 65/146 (44.52%), Query Frame = 1


Query: 6   KTVLITGVSRGIGRALALELAKHGH-LIIGCGRHKTNLDSLQLQLSNASPQNHLLFIADV 65
           K+ L+TG SRGIGR++AL+LA+ G+ + +     K   +++  ++  A   +     A+V
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI-KAKGVDSFAIQANV 64

Query: 66  KSDDSIRQMAHTVRDKLGSLDII-----------------------------GAANVLRH 122
              D ++ M   V  + GSLD++                             G  N ++ 
Sbjct: 65  ADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQK 124

[Close]

BLAST of Cp4.1LG01g16910 vs. Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.4e-06
Identity = 38/146 (26.03%), Postives = 65/146 (44.52%), Query Frame = 1


Query: 6   KTVLITGVSRGIGRALALELAKHGH-LIIGCGRHKTNLDSLQLQLSNASPQNHLLFIADV 65
           K+ L+TG SRGIGR++AL+LA+ G+ + +     K   +++  ++  A   +     A+V
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI-KAKGVDSFAIQANV 64

Query: 66  KSDDSIRQMAHTVRDKLGSLDII-----------------------------GAANVLRH 122
              D ++ M   V  + GSLD++                             G  N ++ 
Sbjct: 65  ADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQK 124

[Close]

BLAST of Cp4.1LG01g16910 vs. TrEMBL
Match: A0A0A0KIN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G011650 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.8e-37
Identity = 88/157 (56.05%), Postives = 104/157 (66.24%), Query Frame = 1


Query: 2   AATKKTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFI 61
           A T K ++I+GVSRG+GRALALELAK GH IIGC R K  LDSLQLQLSNASP+NHLLF 
Sbjct: 34  AETTKVIVISGVSRGLGRALALELAKLGHTIIGCSRDKIKLDSLQLQLSNASPRNHLLFN 93

Query: 62  ADVKSDDSIRQMAHTVRDKLGSLDII------------------------------GAAN 121
            DVKS++SIR+MA TV++K GS+DII                              G AN
Sbjct: 94  FDVKSNESIREMAQTVKEKFGSVDIIVNNAAVVAENLKLWEIPNEIFDDVIDTNMKGVAN 153

Query: 122 VLRHFIPLMLPRNQGIIVNISSLYGRTVGPLVRICCN 129
           +LRHFIPLMLP+N+GIIVN+SSLYGR         C+
Sbjct: 154 MLRHFIPLMLPKNKGIIVNVSSLYGRIAAARASAYCS 190

[Close]

BLAST of Cp4.1LG01g16910 vs. TrEMBL
Match: A0A078G653_BRANA (BnaA08g25840D protein OS=Brassica napus GN=BnaA08g25840D PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.7e-29
Identity = 77/152 (50.66%), Postives = 94/152 (61.84%), Query Frame = 1


Query: 6   KTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFIADVK 65
           K VLITGVS+G+GRAL+LE+AK GH +IGC R +  L +LQ +LS  SP+NHLL  ADVK
Sbjct: 18  KVVLITGVSKGLGRALSLEMAKRGHTVIGCARTQEKLTALQSELS--SPENHLLLTADVK 77

Query: 66  SDDSIRQMAHTVRDKLGSLDII------------------------------GAANVLRH 125
           SD S+++MAHT+ +K G  DII                              G  NVLRH
Sbjct: 78  SDSSVKEMAHTIMEKKGVPDIIVNNAGTINKNNKIWEVSAEDFDSVMDTNVKGVVNVLRH 137

Query: 126 FIPLMLPRNQGIIVNISSLYGRTVGPLVRICC 128
           FIPLMLPR QGIIVN+SS +GR+   LV   C
Sbjct: 138 FIPLMLPRKQGIIVNMSSGWGRSGAALVAPYC 167

[Close]

BLAST of Cp4.1LG01g16910 vs. TrEMBL
Match: A0A0A0KJF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G070680 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-28
Identity = 74/153 (48.37%), Postives = 92/153 (60.13%), Query Frame = 1


Query: 6   KTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFIADVK 65
           K +LITGVS+G+GRALALELAK GH IIGC R++T LD LQ   SN  P NHLL   DVK
Sbjct: 8   KKILITGVSQGLGRALALELAKRGHTIIGCSRNQTKLDLLQPIFSNIPPYNHLLLNLDVK 67

Query: 66  SDDSIRQMAHTVRDKLGSLDII------------------------------GAANVLRH 125
            DD +++    + +K+G  DII                              G AN+LRH
Sbjct: 68  LDDKVKETLEIIVEKIGVPDIIVNNAAMINVKAKIWEISREEFDDVIDTNIKGTANILRH 127

Query: 126 FIPLMLPRNQGIIVNISSLYGRTVGPLVRICCN 129
           FIPL+LP+N+GIIVNISS++GR   PLV   C+
Sbjct: 128 FIPLLLPKNKGIIVNISSIFGRMGVPLVSPYCS 160

[Close]

BLAST of Cp4.1LG01g16910 vs. TrEMBL
Match: A0A0A0LW25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570200 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.5e-26
Identity = 76/148 (51.35%), Postives = 91/148 (61.49%), Query Frame = 1


Query: 1   MAATKKTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASP-QNHLL 60
           MAA  K VLITGVS+GIGRALALELA +GH +IGC R +T LDSLQLQLS  SP  NHLL
Sbjct: 13  MAAVSKKVLITGVSKGIGRALALELATYGHTVIGCSRDQTKLDSLQLQLSKVSPIVNHLL 72

Query: 61  FIADVKSDDSIRQM----------------AHTVRDKLGSL--------------DIIGA 118
              DVK + S+ +                    V +K+G++              +I G 
Sbjct: 73  LSVDVKCNRSVEEFARTVVENELVPDIIVNNAGVVNKVGNMWEIDVQDFDTVIDINIKGT 132

[Close]

BLAST of Cp4.1LG01g16910 vs. TrEMBL
Match: A0A0D3DNW4_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.5e-26
Identity = 74/152 (48.68%), Postives = 93/152 (61.18%), Query Frame = 1


Query: 6    KTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFIADVK 65
            KTVLITGVS+G+GRAL+LE+AK GH +IGC R +  L +LQ +LS  SP+NHLL  ADVK
Sbjct: 1236 KTVLITGVSKGLGRALSLEMAKRGHTVIGCARTQEKLTALQSELS--SPENHLLLTADVK 1295

Query: 66   SDDSIRQMAHTVRDKLGSLDII--GAANVLR----------------------------H 125
            SD S+++MAHT+ +K G  DII   A  + +                            H
Sbjct: 1296 SDSSVKEMAHTIMEKKGVPDIIVNNAGTINKNSKIWEVSAEDFDSVMDTNVKGVVNVLRH 1355

Query: 126  FIPLMLPRNQGIIVNISSLYGRTVGPLVRICC 128
            FIPLMLPR QGIIVN+SS +GR+   LV   C
Sbjct: 1356 FIPLMLPRKQGIIVNMSSGWGRSGAALVAPYC 1385

[Close]

BLAST of Cp4.1LG01g16910 vs. TAIR10
Match: AT1G10310.1 (AT1G10310.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 1.6e-27
Identity = 72/152 (47.37%), Postives = 92/152 (60.53%), Query Frame = 1


Query: 6   KTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFIADVK 65
           +TVLITGVS+G+GRALALELAK GH +IGC R +  L +LQ +LS+++  NHLL  ADVK
Sbjct: 18  RTVLITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQSELSSST--NHLLLTADVK 77

Query: 66  SDDSIRQMAHTVRDKLGSLDII--GAANVLR----------------------------H 125
           S+ S+ +MAHT+ +K G  DII   A  + +                            H
Sbjct: 78  SNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFDNVMDTNVKGVANVLRH 137

Query: 126 FIPLMLPRNQGIIVNISSLYGRTVGPLVRICC 128
           FIPLMLPR QGIIVN+SS +GR+   LV   C
Sbjct: 138 FIPLMLPRKQGIIVNMSSGWGRSGAALVAPYC 167

[Close]

BLAST of Cp4.1LG01g16910 vs. NCBI nr
Match: gi|778697976|ref|XP_004149629.2| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-36
Identity = 88/157 (56.05%), Postives = 104/157 (66.24%), Query Frame = 1


Query: 2   AATKKTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFI 61
           A T K ++I+GVSRG+GRALALELAK GH IIGC R K  LDSLQLQLSNASP+NHLLF 
Sbjct: 34  AETTKVIVISGVSRGLGRALALELAKLGHTIIGCSRDKIKLDSLQLQLSNASPRNHLLFN 93

Query: 62  ADVKSDDSIRQMAHTVRDKLGSLDII------------------------------GAAN 121
            DVKS++SIR+MA TV++K GS+DII                              G AN
Sbjct: 94  FDVKSNESIREMAQTVKEKFGSVDIIVNNAAVVAENLKLWEIPNEIFDDVIDTNMKGVAN 153

Query: 122 VLRHFIPLMLPRNQGIIVNISSLYGRTVGPLVRICCN 129
           +LRHFIPLMLP+N+GIIVN+SSLYGR         C+
Sbjct: 154 MLRHFIPLMLPKNKGIIVNVSSLYGRIAAARASAYCS 190

[Close]

BLAST of Cp4.1LG01g16910 vs. NCBI nr
Match: gi|700194398|gb|KGN49575.1| (hypothetical protein Csa_5G011650 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-36
Identity = 88/157 (56.05%), Postives = 104/157 (66.24%), Query Frame = 1


Query: 2   AATKKTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFI 61
           A T K ++I+GVSRG+GRALALELAK GH IIGC R K  LDSLQLQLSNASP+NHLLF 
Sbjct: 34  AETTKVIVISGVSRGLGRALALELAKLGHTIIGCSRDKIKLDSLQLQLSNASPRNHLLFN 93

Query: 62  ADVKSDDSIRQMAHTVRDKLGSLDII------------------------------GAAN 121
            DVKS++SIR+MA TV++K GS+DII                              G AN
Sbjct: 94  FDVKSNESIREMAQTVKEKFGSVDIIVNNAAVVAENLKLWEIPNEIFDDVIDTNMKGVAN 153

Query: 122 VLRHFIPLMLPRNQGIIVNISSLYGRTVGPLVRICCN 129
           +LRHFIPLMLP+N+GIIVN+SSLYGR         C+
Sbjct: 154 MLRHFIPLMLPKNKGIIVNVSSLYGRIAAARASAYCS 190

[Close]

BLAST of Cp4.1LG01g16910 vs. NCBI nr
Match: gi|778697979|ref|XP_011654452.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-34
Identity = 87/157 (55.41%), Postives = 103/157 (65.61%), Query Frame = 1


Query: 2   AATKKTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFI 61
           A T K ++I+GVSRG+GRALALELAK GH IIGC R K  LDSLQLQLSNASP+NHLLF 
Sbjct: 34  AETTKVIVISGVSRGLGRALALELAKLGHTIIGCSRDKIKLDSLQLQLSNASPRNHLLFN 93

Query: 62  ADVKSDDSIRQMAHTVRDKLGSLDII------------------------------GAAN 121
            D KS++SIR+MA TV++K GS+DII                              G AN
Sbjct: 94  FD-KSNESIREMAQTVKEKFGSVDIIVNNAAVVAENLKLWEIPNEIFDDVIDTNMKGVAN 153

Query: 122 VLRHFIPLMLPRNQGIIVNISSLYGRTVGPLVRICCN 129
           +LRHFIPLMLP+N+GIIVN+SSLYGR         C+
Sbjct: 154 MLRHFIPLMLPKNKGIIVNVSSLYGRIAAARASAYCS 189

[Close]

BLAST of Cp4.1LG01g16910 vs. NCBI nr
Match: gi|674912037|emb|CDY20941.1| (BnaA08g25840D [Brassica napus])

HSP 1 Score: 135.2 bits (339), Expect = 8.2e-29
Identity = 77/152 (50.66%), Postives = 94/152 (61.84%), Query Frame = 1


Query: 6   KTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFIADVK 65
           K VLITGVS+G+GRAL+LE+AK GH +IGC R +  L +LQ +LS  SP+NHLL  ADVK
Sbjct: 18  KVVLITGVSKGLGRALSLEMAKRGHTVIGCARTQEKLTALQSELS--SPENHLLLTADVK 77

Query: 66  SDDSIRQMAHTVRDKLGSLDII------------------------------GAANVLRH 125
           SD S+++MAHT+ +K G  DII                              G  NVLRH
Sbjct: 78  SDSSVKEMAHTIMEKKGVPDIIVNNAGTINKNNKIWEVSAEDFDSVMDTNVKGVVNVLRH 137

Query: 126 FIPLMLPRNQGIIVNISSLYGRTVGPLVRICC 128
           FIPLMLPR QGIIVN+SS +GR+   LV   C
Sbjct: 138 FIPLMLPRKQGIIVNMSSGWGRSGAALVAPYC 167

[Close]

BLAST of Cp4.1LG01g16910 vs. NCBI nr
Match: gi|449449088|ref|XP_004142297.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 2.4e-28
Identity = 74/153 (48.37%), Postives = 92/153 (60.13%), Query Frame = 1


Query: 6   KTVLITGVSRGIGRALALELAKHGHLIIGCGRHKTNLDSLQLQLSNASPQNHLLFIADVK 65
           K +LITGVS+G+GRALALELAK GH IIGC R++T LD LQ   SN  P NHLL   DVK
Sbjct: 8   KKILITGVSQGLGRALALELAKRGHTIIGCSRNQTKLDLLQPIFSNIPPYNHLLLNLDVK 67

Query: 66  SDDSIRQMAHTVRDKLGSLDII------------------------------GAANVLRH 125
            DD +++    + +K+G  DII                              G AN+LRH
Sbjct: 68  LDDKVKETLEIIVEKIGVPDIIVNNAAMINVKAKIWEISREEFDDVIDTNIKGTANILRH 127

Query: 126 FIPLMLPRNQGIIVNISSLYGRTVGPLVRICCN 129
           FIPL+LP+N+GIIVNISS++GR   PLV   C+
Sbjct: 128 FIPLLLPKNKGIIVNISSIFGRMGVPLVSPYCS 160

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g16910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTALR_ARATH	2.9e-26	47.37	NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 P...	[more]
YOXD_BACSU	9.5e-09	33.33	Uncharacterized oxidoreductase YoxD OS=Bacillus subtilis (strain 168) GN=yoxD PE...	[more]
FABG_THEMA	2.0e-06	27.86	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain A...	[more]
FABG_STAAN	3.4e-06	26.03	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain...	[more]
FABG_STAAM	3.4e-06	26.03	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain...	[more]

BLAST of Cp4.1LG01g16910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIN8_CUCSA	9.8e-37	56.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G011650 PE=3 SV=1	[more]
A0A078G653_BRANA	5.7e-29	50.66	BnaA08g25840D protein OS=Brassica napus GN=BnaA08g25840D PE=3 SV=1	[more]
A0A0A0KJF0_CUCSA	1.7e-28	48.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G070680 PE=3 SV=1	[more]
A0A0A0LW25_CUCSA	4.5e-26	51.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570200 PE=3 SV=1	[more]
A0A0D3DNW4_BRAOL	4.5e-26	48.68	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]

BLAST of Cp4.1LG01g16910 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10310.1	1.6e-27	47.37	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of Cp4.1LG01g16910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778697976\|ref\|XP_004149629.2\|	1.4e-36	56.05	PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucumis sa...	[more]
gi\|700194398\|gb\|KGN49575.1\|	1.4e-36	56.05	hypothetical protein Csa_5G011650 [Cucumis sativus]	[more]
gi\|778697979\|ref\|XP_011654452.1\|	1.0e-34	55.41	PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucumis sa...	[more]
gi\|674912037\|emb\|CDY20941.1\|	8.2e-29	50.66	BnaA08g25840D [Brassica napus]	[more]
gi\|449449088\|ref\|XP_004142297.1\|	2.4e-28	48.37	PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR002347	SDR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044710	single-organism metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g16910.1	Cp4.1LG01g16910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 100..116 score: 2.8E-9coord: 7..24 score: 2.
IPR002347	Short-chain dehydrogenase/reductase SDR	PANTHER	PTHR24322	FAMILY NOT NAMED	coord: 10..115 score: 1.3
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 6..87 score: 1.8
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 88..121 score: 1.3E-4coord: 4..87 score: 2.3
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 4..122 score: 2.6
None	No IPR available	PANTHER	PTHR24322:SF500	SUBFAMILY NOT NAMED	coord: 10..115 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g16910	CmoCh04G020400	Cucurbita moschata (Rifu)	cmocpeB680

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g16910	Wax gourd	cpewgoB0559
Cp4.1LG01g16910	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g16910	Cucurbita maxima (Rimu)	cmacpeB732
Cp4.1LG01g16910	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g16910	Cucurbita moschata (Rifu)	cmocpeB682
Cp4.1LG01g16910	Cucurbita moschata (Rifu)	cmocpeB686
Cp4.1LG01g16910	Wild cucumber (PI 183967)	cpecpiB449
Cp4.1LG01g16910	Cucumber (Chinese Long) v2	cpecuB449
Cp4.1LG01g16910	Bottle gourd (USVL1VR-Ls)	cpelsiB319
Cp4.1LG01g16910	Watermelon (Charleston Gray)	cpewcgB365
Cp4.1LG01g16910	Watermelon (Charleston Gray)	cpewcgB369
Cp4.1LG01g16910	Watermelon (97103) v1	cpewmB455
Cp4.1LG01g16910	Melon (DHL92) v3.5.1	cpemeB374
Cp4.1LG01g16910	Cucumber (Gy14) v2	cgybcpeB663
Cp4.1LG01g16910	Melon (DHL92) v3.6.1	cpemedB433
Cp4.1LG01g16910	Cucumber (Chinese Long) v3	cpecucB0557