Cp4.1LG01g16890 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g16890
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description3-oxoacyl-[acyl-carrier protein] reductase
LocationCp4.1LG01 : 10791581 .. 10793375 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGCAAATTCCCCATGGCCTCATCTCAGAATCAATCCTCCCGGCAAGGTTCAAATGCTTCCCGAAAGGTGTTGATCACTGGGGTGAGCAAGGGATTAGGAAGAGCTTTAGCCTTGGAGCTGGCTACCCACGGCCACACCATAATCGGTTGCTCACGCGATCAAACCAAACTTGATTCCCTTCAAGAACAGCTTTCTAAGTCCTCTTCAATTCAGCATTTCCTCTTCGCACTCGATGTGGTAGGTAAAAGCAATTGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGACTTTGCTTTAGACTCCTCCAAAAGGGCTCACACGAATAGAGATAGTATTATTTGATTATAAACCCATGATCATTTGCTAAATTAGTAGACCCACTTCAATAATTTTACAAAAACTGATTGAAAATTTATGGTCTTGTAGAGATCAAACAAGAAGGTTGAAGAATTGGCGCAAATTATTGGGAAACAAAAACTTGTTCCTGATATCATCGGTATTCCCATCCCTTCAATCCTTAATTTATTGTACGAAAACGGGTAATGACATAGTTTTTGGTTTCATTACAGTGAATAATGCGGGTTTGGCTCATGAACAAGTGAAGATATGGGAACTTGATGCACAAGATTTTGATAACGTTATTGATACCAACATCAAAGGAATTGCAAATGTTTTGCGCCATTTTCTTCCACTTATGATGGCCACCAAACAAGGAATTGTTGTGAATATTTCATCAAGTGCGGGAAGAGATACCCACGAAAATGTACGTGATTGGATATTTACATGAAAGTTTTAAAGCTTTTTTTGTTGATTTTAGGTTTTGTTTCAAGTTGCAGTTTTCAGCATATTGTTCATCAAAATGGGCAATTGAAGGATTGAGCAAATGTGTTGCGAAAGGAGTAGCAGAGGGGATGGCAGTTGTGGCCTTGGATCCTGGATTCATATGCACAGACATGCTCCATTTACTCTTAGGTGATGCAGCAACGCGATGCCAATCACCTCAAAAATGGTATGTAATAACACTATTAATTGGCTTGAATGTTACTCAAATTCGAGTTTTTTTTTTTTAAAGTTCCAAGTCTTTTTGCAAACTCCAAAAATAAAAATTGCTTTTGAATTCACTAATTACTTTGCCAACCTTTCATCACTCACCTTTAATATTATAAAGATGGGAGCTACCTCGTGTGGTTGGCTTGTTTTGATGTTAATCTTGGAATGTCACTACTGGATTTTCAAGGCTAAAAGACAAAGTGANACTCGATGTGGTAGGTAAAAGCAATTGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGACTTTGCTTTAGACTCCTCCAAAAGGGCTCACACGAATAGAGATAGTATTATTTGATTATAAACCCATGATCATTTGCTAAATTAGTAGACCCACTTCAATAATTTTACAAAAACTGATTGAAAATTTATGGTCTTGTAGAGATCAAACAAGAAGGTTGAAGAATTGGCGCAAATTATTGGGAAACAAAAACTTGTTCCTGATATCATCGGTATTCCCATCCCTTCAATCCTTAATTTATTGTACGAAAACGGGTAATGACATAGTTTTTGGTTTCATTACAGTGAATAATGCGGGTTTGGCTCATGAACAAGTGAAGATATGGGAACTTGATGCACAAGATTTTGATAACGTTATTGATACCAACATCAAAGGAATTGCAAATGTTTTGCGCCATTTTCTTCCACTTATGATGGCCACCAAACAAGGAATTGTTGTGAATATTTCATCAAGTGCGGGAAGAGATACCCACGAA

mRNA sequence

CAGCAAATTCCCCATGGCCTCATCTCAGAATCAATCCTCCCGGCAAGGTTCAAATGCTTCCCGAAAGGTGTTGATCACTGGGGTGAGCAAGGGATTAGGAAGAGCTTTAGCCTTGGAGCTGGCTACCCACGGCCACACCATAATCGTGAATAATGCGGGTTTGGCTCATGAACAAGTGAAGATATGGGAACTTGATGCACAAGATTTTGATAACGTTATTGATACCAACATCAAAGGAATTGCAAATGTTTTGCGCCATTTTCTTCCACTTATGATGGCCACCAAACAAGGAATTGTTGTGAATATTTCATCAAGTGCGGGAAGAGATACCCACGAAAATGTACTGAATAATGCGGGTTTGGCTCATGAACAAGTGAAGATATGGGAACTTGATGCACAAGATTTTGATAACGTTATTGATACCAACATCAAAGGAATTGCAAATGTTTTGCGCCATTTTCTTCCACTTATGATGGCCACCAAACAAGGAATTGTTGTGAATATTTCATCAAGTGCGGGAAGAGATACCCACGAA

Coding sequence (CDS)

ATGGCCTCATCTCAGAATCAATCCTCCCGGCAAGGTTCAAATGCTTCCCGAAAGGTGTTGATCACTGGGGTGAGCAAGGGATTAGGAAGAGCTTTAGCCTTGGAGCTGGCTACCCACGGCCACACCATAATCGTGAATAATGCGGGTTTGGCTCATGAACAAGTGAAGATATGGGAACTTGATGCACAAGATTTTGATAACGTTATTGATACCAACATCAAAGGAATTGCAAATGTTTTGCGCCATTTTCTTCCACTTATGATGGCCACCAAACAAGGAATTGTTGTGAATATTTCATCAAGTGCGGGAAGAGATACCCACGAAAATGTACTGAATAATGCGGGTTTGGCTCATGAACAAGTGAAGATATGGGAACTTGATGCACAAGATTTTGATAACGTTATTGATACCAACATCAAAGGAATTGCAAATGTTTTGCGCCATTTTCTTCCACTTATGATGGCCACCAAACAAGGAATTGTTGTGAATATTTCATCAAGTGCGGGAAGAGATACCCACGAA

Protein sequence

MASSQNQSSRQGSNASRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQDFDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHENVLNNAGLAHEQVKIWELDAQDFDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHE
Homology
[Close]
BLAST of Cp4.1LG01g16890 vs. Swiss-Prot
Match: PTALR_ARATH (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-28
Identity = 72/158 (45.57%), Postives = 98/158 (62.03%), Query Frame = 1 

Query: 15  ASRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQDFDNVIDTNIK 74
           A+R VLITGVSKGLGRALALELA  GHT+I    G A  Q K+  L ++           
Sbjct: 16  AARTVLITGVSKGLGRALALELAKRGHTVI----GCARSQEKLTALQSE----------- 75

Query: 75  GIANVLRHFLPLMMATKQGIVVNISSSA--GRDTHENVLNNAGLAHEQVKIWELDAQDFD 134
            +++   H L          V  ++ +    +   + ++NNAG  ++  KIWE+ A+DFD
Sbjct: 76  -LSSSTNHLLLTADVKSNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFD 135

Query: 135 NVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGR 171
           NV+DTN+KG+ANVLRHF+PLM+  KQGI+VN+SS  GR
Sbjct: 136 NVMDTNVKGVANVLRHFIPLMLPRKQGIIVNMSSGWGR 157

[Close]
BLAST of Cp4.1LG01g16890 vs. Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13
Identity = 45/156 (28.85%), Postives = 87/156 (55.77%), Query Frame = 1 

Query: 16  SRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHE-QVKIWELDAQDFDN-VIDTNI 75
           ++  L+TG S+G+GR++AL+LA  G+ + VN AG   + +  + E+ A+  D+  I  N+
Sbjct: 4   TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV 63

Query: 76  KGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHENVLNNAGLAHEQVKIWELDAQDFDN 135
                V            + ++  + S  G  + + ++NNAG+  + + +  +  Q++D+
Sbjct: 64  ADADEV------------KAMIKEVVSQFG--SLDVLVNNAGITRDNL-LMRMKEQEWDD 123

Query: 136 VIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAG 170
           VIDTN+KG+ N ++   P M+  + G ++N+SS  G
Sbjct: 124 VIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVG 144

[Close]
BLAST of Cp4.1LG01g16890 vs. Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13
Identity = 45/156 (28.85%), Postives = 87/156 (55.77%), Query Frame = 1 

Query: 16  SRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHE-QVKIWELDAQDFDN-VIDTNI 75
           ++  L+TG S+G+GR++AL+LA  G+ + VN AG   + +  + E+ A+  D+  I  N+
Sbjct: 4   TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV 63

Query: 76  KGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHENVLNNAGLAHEQVKIWELDAQDFDN 135
                V            + ++  + S  G  + + ++NNAG+  + + +  +  Q++D+
Sbjct: 64  ADADEV------------KAMIKEVVSQFG--SLDVLVNNAGITRDNL-LMRMKEQEWDD 123

Query: 136 VIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAG 170
           VIDTN+KG+ N ++   P M+  + G ++N+SS  G
Sbjct: 124 VIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVG 144

[Close]
BLAST of Cp4.1LG01g16890 vs. Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13
Identity = 45/156 (28.85%), Postives = 87/156 (55.77%), Query Frame = 1 

Query: 16  SRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHE-QVKIWELDAQDFDN-VIDTNI 75
           ++  L+TG S+G+GR++AL+LA  G+ + VN AG   + +  + E+ A+  D+  I  N+
Sbjct: 4   TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV 63

Query: 76  KGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHENVLNNAGLAHEQVKIWELDAQDFDN 135
                V            + ++  + S  G  + + ++NNAG+  + + +  +  Q++D+
Sbjct: 64  ADADEV------------KAMIKEVVSQFG--SLDVLVNNAGITRDNL-LMRMKEQEWDD 123

Query: 136 VIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAG 170
           VIDTN+KG+ N ++   P M+  + G ++N+SS  G
Sbjct: 124 VIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVG 144

[Close]
BLAST of Cp4.1LG01g16890 vs. Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13
Identity = 45/156 (28.85%), Postives = 87/156 (55.77%), Query Frame = 1 

Query: 16  SRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHE-QVKIWELDAQDFDN-VIDTNI 75
           ++  L+TG S+G+GR++AL+LA  G+ + VN AG   + +  + E+ A+  D+  I  N+
Sbjct: 4   TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV 63

Query: 76  KGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHENVLNNAGLAHEQVKIWELDAQDFDN 135
                V            + ++  + S  G  + + ++NNAG+  + + +  +  Q++D+
Sbjct: 64  ADADEV------------KAMIKEVVSQFG--SLDVLVNNAGITRDNL-LMRMKEQEWDD 123

Query: 136 VIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAG 170
           VIDTN+KG+ N ++   P M+  + G ++N+SS  G
Sbjct: 124 VIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVG 144

[Close]
BLAST of Cp4.1LG01g16890 vs. TrEMBL
Match: A0A0A0KMF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G002570 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.4e-32
Identity = 86/183 (46.99%), Postives = 110/183 (60.11%), Query Frame = 1 

Query: 4   SQNQSSRQGSNASRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQ 63
           S++ +  + S+  RKVLITGVSKGLGRALALELA  GHTII    G + +QVK+  L  Q
Sbjct: 12  SESMAVAEPSSCCRKVLITGVSKGLGRALALELANRGHTII----GCSRDQVKLDSLQQQ 71

Query: 64  ------------DFDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHENVL 123
                         D   D N++  A  +          K  +V +I           ++
Sbjct: 72  LSTTSLNQHFFFKLDVKSDNNVQEFAQFV---------AKNNLVPHI-----------LV 131

Query: 124 NNAGLAHEQVKIWELDAQDFDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRD 175
           NNAGLAH+  KIWELDA++FDNVIDTN+KGIAN+LRHF+PLM+    GI+VN+SS AGR 
Sbjct: 132 NNAGLAHKSAKIWELDAEEFDNVIDTNVKGIANILRHFIPLMIQNNNGIIVNMSSGAGRS 170

[Close]
BLAST of Cp4.1LG01g16890 vs. TrEMBL
Match: A0A0A0LYI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570190 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.9e-28
Identity = 79/162 (48.77%), Postives = 102/162 (62.96%), Query Frame = 1 

Query: 16  SRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQDFDNVIDTNIKG 75
           S+KVLITGVS+GLGRALALELAT+GHT+I    G + +Q K+  L  Q         +  
Sbjct: 17  SKKVLITGVSRGLGRALALELATYGHTVI----GCSRDQTKLDSLQLQ---------LSK 76

Query: 76  IANVLRHFLPLMMATKQGIVVNISSSAGRDTHEN------VLNNAGLAHEQVKIWELDAQ 135
           ++    H L L +  K    V       R   EN      ++NNAG+A+++  +WE+D Q
Sbjct: 77  VSPNANHLL-LSIDVKCNRSVE---EFARTVMENELIPDIIVNNAGVANKRSNMWEIDVQ 136

Query: 136 DFDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRD 172
           DFDNVIDTNIKG  N+LRHF+PLM+   QGI+VNISS AGRD
Sbjct: 137 DFDNVIDTNIKGTTNILRHFIPLMIPYNQGIIVNISSDAGRD 161

[Close]
BLAST of Cp4.1LG01g16890 vs. TrEMBL
Match: R0IE56_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10011121mg PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.8e-28
Identity = 76/168 (45.24%), Postives = 105/168 (62.50%), Query Frame = 1 

Query: 15  ASRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQ---DFDNVIDT 74
           A+R VLITGVSKGLGRALALELA  GHT+I    G A  Q K+  L +      ++++ T
Sbjct: 16  AARTVLITGVSKGLGRALALELAKRGHTVI----GCARTQEKLTALQSDLSSPANHLLLT 75

Query: 75  NIKGIANVLRHFLPLMMATKQGIVVNISSSAGRDTH---------ENVLNNAGLAHEQVK 134
               I+  L + +  +    Q   + ++SS     H         + ++NNAG  ++  K
Sbjct: 76  ADVVISAALPNLMSFLCCAIQSAFLKVNSSVEELAHTIMEKKGVPDIIVNNAGTINKNSK 135

Query: 135 IWELDAQDFDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGR 171
           IWE+ A+DFDNV+DTN+KG+ANVLRHF+PLM+  KQGI+VN+SS  GR
Sbjct: 136 IWEVSAEDFDNVMDTNVKGVANVLRHFIPLMLPRKQGIIVNMSSGWGR 179

[Close]
BLAST of Cp4.1LG01g16890 vs. TrEMBL
Match: V4L7T6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10008625mg PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.2e-27
Identity = 75/160 (46.88%), Postives = 103/160 (64.38%), Query Frame = 1 

Query: 15  ASRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIW----ELDAQDFDNVID 74
           A+R VLITGVSKGLGRALALELA  GHT+I    G A  Q K+     EL + D   ++ 
Sbjct: 16  AARTVLITGVSKGLGRALALELAKRGHTVI----GCARSQEKLTALRSELSSPDNHLLLP 75

Query: 75  TNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHENVLNNAGLAHEQVKIWELDAQD 134
            ++K  ++V    +   +  K+G+             + ++NNAG  ++  KIWE+ A+D
Sbjct: 76  ADVKSNSSVEE--MAHTIVEKKGVP------------DIIVNNAGTINKNSKIWEVSAED 135

Query: 135 FDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGR 171
           FDNV+DTN+KG+ANVLRHF+PLM+  KQGI+VN+SS  GR
Sbjct: 136 FDNVMDTNVKGVANVLRHFIPLMLPRKQGIIVNMSSGWGR 157

[Close]
BLAST of Cp4.1LG01g16890 vs. TrEMBL
Match: D7KKP2_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471142 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-26
Identity = 72/158 (45.57%), Postives = 98/158 (62.03%), Query Frame = 1 

Query: 15  ASRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQDFDNVIDTNIK 74
           A+R VLITGVSKGLGRALALELA  GHT+I    G A  Q K+  L ++           
Sbjct: 14  AARTVLITGVSKGLGRALALELAKRGHTVI----GCARTQEKLTALQSE----------- 73

Query: 75  GIANVLRHFLPLMMATKQGIVVNISSSA--GRDTHENVLNNAGLAHEQVKIWELDAQDFD 134
            +++   H L          V  ++ +    +   + ++NNAG  ++  KIWE+ A+DFD
Sbjct: 74  -LSSPTNHLLLTADVKSNSSVEELAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFD 133

Query: 135 NVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGR 171
           NV+DTN+KG+ANVLRHF+PLM+  KQGI+VN+SS  GR
Sbjct: 134 NVMDTNVKGVANVLRHFIPLMLPRKQGIIVNMSSGWGR 155

[Close]
BLAST of Cp4.1LG01g16890 vs. TAIR10
Match: AT1G10310.1 (AT1G10310.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 127.5 bits (319), Expect = 8.1e-30
Identity = 72/158 (45.57%), Postives = 98/158 (62.03%), Query Frame = 1 

Query: 15  ASRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQDFDNVIDTNIK 74
           A+R VLITGVSKGLGRALALELA  GHT+I    G A  Q K+  L ++           
Sbjct: 16  AARTVLITGVSKGLGRALALELAKRGHTVI----GCARSQEKLTALQSE----------- 75

Query: 75  GIANVLRHFLPLMMATKQGIVVNISSSA--GRDTHENVLNNAGLAHEQVKIWELDAQDFD 134
            +++   H L          V  ++ +    +   + ++NNAG  ++  KIWE+ A+DFD
Sbjct: 76  -LSSSTNHLLLTADVKSNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFD 135

Query: 135 NVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGR 171
           NV+DTN+KG+ANVLRHF+PLM+  KQGI+VN+SS  GR
Sbjct: 136 NVMDTNVKGVANVLRHFIPLMLPRKQGIIVNMSSGWGR 157

[Close]
BLAST of Cp4.1LG01g16890 vs. TAIR10
Match: AT3G55290.1 (AT3G55290.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-08
Identity = 49/152 (32.24%), Postives = 72/152 (47.37%), Query Frame = 1 

Query: 19  VLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQDFDNVIDTNIKGIAN 78
           VL+TG S G+GR + L+LA  G  +I      A  +V        + ++   T I+  A 
Sbjct: 23  VLVTGASSGIGREICLDLAKAGCQVIA-----AARRVDRLNSLCSEINSFSSTGIQAAA- 82

Query: 79  VLRHFLPLMMATKQGIVVNISSSAGRDTHENVLNNAGLAHEQVKIWELDAQDFDNVIDTN 138
            L   +    AT Q  V       G+   + ++NNAG+        +L   ++DNV  TN
Sbjct: 83  -LELDVSSDAATIQKAVREAWDIFGK--IDALINNAGIRGNVKSSLDLSEDEWDNVFKTN 142

Query: 139 IKGIANVLRHFLPLMMATKQ-GIVVNISSSAG 170
           +KG   V +H   LM   K+ G V+NISS AG
Sbjct: 143 LKGPWLVSKHVCMLMRDAKRGGSVINISSIAG 165

[Close]
BLAST of Cp4.1LG01g16890 vs. TAIR10
Match: AT3G55310.1 (AT3G55310.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 8.7e-08
Identity = 48/152 (31.58%), Postives = 73/152 (48.03%), Query Frame = 1 

Query: 19  VLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQDFDNVIDTNIKGIAN 78
           VL+TG S G+GR + L+LA  G  +I      A  +V        + ++   T I+  A 
Sbjct: 22  VLVTGASSGIGREICLDLAKAGCQVIA-----AARRVDRLNSLCSEINSFSSTGIQAAA- 81

Query: 79  VLRHFLPLMMATKQGIVVNISSSAGRDTHENVLNNAGLAHEQVKIWELDAQDFDNVIDTN 138
            L   +    AT Q  V       G+   + ++NNAG+        +L   ++DNV +TN
Sbjct: 82  -LELDVSSDAATIQKAVREAWDIFGK--IDALINNAGIRGNVKLSLDLSEDEWDNVFNTN 141

Query: 139 IKGIANVLRHFLPLMMATKQ-GIVVNISSSAG 170
           +KG   V ++   LM   K+ G V+NISS AG
Sbjct: 142 LKGPWLVAKYVCVLMRDAKRGGSVINISSVAG 164

[Close]
BLAST of Cp4.1LG01g16890 vs. TAIR10
Match: AT1G24360.1 (AT1G24360.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 52.4 bits (124), Expect = 3.3e-07
Identity = 43/151 (28.48%), Postives = 74/151 (49.01%), Query Frame = 1 

Query: 19  VLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQDFDNVIDTNIKGIAN 78
           V+ITG S+G+G+A+AL L   G  ++VN A  A E  ++    A+  +      I    +
Sbjct: 79  VVITGASRGIGKAIALALGKAGCKVLVNYARSAKEAEEV----AKQIEEYGGQAITFGGD 138

Query: 79  VLRHFLPLMMATKQGIVVNISSSAGRDTHENVLNNAGLAHEQVKIWELDAQDFDNVIDTN 138
           V +       AT    ++  +      T + V+NNAG+  + + I  +    +D VI  N
Sbjct: 139 VSK-------ATDVDAMMKTALDKW-GTIDVVVNNAGITRDTLLI-RMKQSQWDEVIALN 198

Query: 139 IKGIANVLRHFLPLMMATKQGIVVNISSSAG 170
           + G+    +  + +MM  K+G ++NISS  G
Sbjct: 199 LTGVFLCTQAAVKIMMKKKRGRIINISSVVG 216

[Close]
BLAST of Cp4.1LG01g16890 vs. TAIR10
Match: AT1G24470.1 (AT1G24470.1 beta-ketoacyl reductase 2)

HSP 1 Score: 48.5 bits (114), Expect = 4.8e-06
Identity = 35/150 (23.33%), Postives = 71/150 (47.33%), Query Frame = 1 

Query: 20  LITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQDFDNVIDTNIKGIANV 79
           ++TG ++G+GRA A ELA HG  +I+ +  L+              ++V D   +   ++
Sbjct: 56  MVTGATEGIGRAFAHELAKHGLNLILVSRNLS------------KLESVSDDFQQEFPHI 115

Query: 80  LRHFLPLMMATKQGIVVNISSSAGRDTHENVLNNAGLAHEQVKIW-ELDAQDFDNVIDTN 139
               +P   +++ G         G +    ++NN G+ + +   + E+D   +  ++  N
Sbjct: 116 KIKIIPFDFSSEGGYGAIEEGIKGLEV-GILINNVGITYPRAMFFHEVDQLTWTKILRVN 175

Query: 140 IKGIANVLRHFLPLMMATKQGIVVNISSSA 169
           ++    V R  +  M+  ++G +VNISS A
Sbjct: 176 LEATTWVTRSLIGPMLHRRRGAIVNISSGA 192

[Close]
BLAST of Cp4.1LG01g16890 vs. NCBI nr
Match: gi|659129579|ref|XP_008464744.1| (PREDICTED: uncharacterized oxidoreductase YMR226C-like [Cucumis melo])

HSP 1 Score: 147.1 bits (370), Expect = 2.8e-32
Identity = 89/177 (50.28%), Postives = 114/177 (64.41%), Query Frame = 1 

Query: 4   SQNQSSRQGSNASRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQ 63
           S N+SS Q    SRKVLITGVSKGLGRALALELA+ GHTII    G + +Q K+  L AQ
Sbjct: 6   SSNESSPQVGLGSRKVLITGVSKGLGRALALELASRGHTII----GCSRDQTKLDSLQAQ 65

Query: 64  DFDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHEN------VLNNAGLA 123
              N+  T         +H L  +       V   +    R T EN      ++NNAGL 
Sbjct: 66  -LSNLSST---------KHLLCNLDVRSNTEVEEFA----RATVENELVPNIIVNNAGLI 125

Query: 124 HEQVKIWELDAQDFDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHE 175
           +   K+WELDA +FDNVIDTN+KGIANV+RHF+PLM+++ +GI++N+SS AGRD+HE
Sbjct: 126 NRNGKMWELDAHEFDNVIDTNVKGIANVMRHFIPLMISSNKGIIINMSSMAGRDSHE 164

[Close]
BLAST of Cp4.1LG01g16890 vs. NCBI nr
Match: gi|449462820|ref|XP_004149138.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus])

HSP 1 Score: 146.4 bits (368), Expect = 4.8e-32
Identity = 89/177 (50.28%), Postives = 114/177 (64.41%), Query Frame = 1 

Query: 4   SQNQSSRQGSNASRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQ 63
           + N SS Q +  SRKVLITGVSKGLGRALALELA+ GHTII    G + +Q K+  L AQ
Sbjct: 5   TSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTII----GCSRDQTKLDSLQAQ 64

Query: 64  DFDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHEN------VLNNAGLA 123
              N+  TN       L + + +   TK            R T EN      ++NNAGL 
Sbjct: 65  -LSNLSSTNH------LLYNVDVRSNTKV-------EEFARATVENELVPNIIVNNAGLI 124

Query: 124 HEQVKIWELDAQDFDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHE 175
           +   KIWELDAQ+FDNVIDTN+KGIAN++RHF+PLM+++ +GI++N+SS AGRD  E
Sbjct: 125 NRSCKIWELDAQEFDNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRDARE 163

[Close]
BLAST of Cp4.1LG01g16890 vs. NCBI nr
Match: gi|449462804|ref|XP_004149130.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31
Identity = 86/183 (46.99%), Postives = 110/183 (60.11%), Query Frame = 1 

Query: 4   SQNQSSRQGSNASRKVLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQ 63
           S++ +  + S+  RKVLITGVSKGLGRALALELA  GHTII    G + +QVK+  L  Q
Sbjct: 12  SESMAVAEPSSCCRKVLITGVSKGLGRALALELANRGHTII----GCSRDQVKLDSLQQQ 71

Query: 64  ------------DFDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHENVL 123
                         D   D N++  A  +          K  +V +I           ++
Sbjct: 72  LSTTSLNQHFFFKLDVKSDNNVQEFAQFV---------AKNNLVPHI-----------LV 131

Query: 124 NNAGLAHEQVKIWELDAQDFDNVIDTNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRD 175
           NNAGLAH+  KIWELDA++FDNVIDTN+KGIAN+LRHF+PLM+    GI+VN+SS AGR 
Sbjct: 132 NNAGLAHKSAKIWELDAEEFDNVIDTNVKGIANILRHFIPLMIQNNNGIIVNMSSGAGRS 170

[Close]
BLAST of Cp4.1LG01g16890 vs. NCBI nr
Match: gi|659129571|ref|XP_008464740.1| (PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X1 [Cucumis melo])

HSP 1 Score: 140.2 bits (352), Expect = 3.4e-30
Identity = 79/158 (50.00%), Postives = 98/158 (62.03%), Query Frame = 1 

Query: 19  VLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQDFDNVIDTNIKGIAN 78
           VLITGVSKGLGRALALELA  GHTII    G + +Q+K+  L  Q   N           
Sbjct: 3   VLITGVSKGLGRALALELANRGHTII----GCSRDQIKLDSLQ-QQLSNTSPN------- 62

Query: 79  VLRHFLPLMMATKQGIVVNISSSAGRDT--HENVLNNAGLAHEQVKIWELDAQDFDNVID 138
             RHF   +  T    V   +    ++      ++NNAGLAH   KIWEL+A++FDNVID
Sbjct: 63  --RHFFFKLDVTSDTHVQEFAQFVAKNNLVPRILVNNAGLAHRSAKIWELEAEEFDNVID 122

Query: 139 TNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHE 175
           TN+KGIAN+LRHF+PLM+    GI+VN+SS AGR  HE
Sbjct: 123 TNVKGIANILRHFVPLMIQNNNGIIVNMSSGAGRSAHE 146

[Close]
BLAST of Cp4.1LG01g16890 vs. NCBI nr
Match: gi|659129575|ref|XP_008464742.1| (PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X3 [Cucumis melo])

HSP 1 Score: 140.2 bits (352), Expect = 3.4e-30
Identity = 79/158 (50.00%), Postives = 98/158 (62.03%), Query Frame = 1 

Query: 19  VLITGVSKGLGRALALELATHGHTIIVNNAGLAHEQVKIWELDAQDFDNVIDTNIKGIAN 78
           VLITGVSKGLGRALALELA  GHTII    G + +Q+K+  L  Q   N           
Sbjct: 3   VLITGVSKGLGRALALELANRGHTII----GCSRDQIKLDSLQ-QQLSNTSPN------- 62

Query: 79  VLRHFLPLMMATKQGIVVNISSSAGRDT--HENVLNNAGLAHEQVKIWELDAQDFDNVID 138
             RHF   +  T    V   +    ++      ++NNAGLAH   KIWEL+A++FDNVID
Sbjct: 63  --RHFFFKLDVTSDTHVQEFAQFVAKNNLVPRILVNNAGLAHRSAKIWELEAEEFDNVID 122

Query: 139 TNIKGIANVLRHFLPLMMATKQGIVVNISSSAGRDTHE 175
           TN+KGIAN+LRHF+PLM+    GI+VN+SS AGR  HE
Sbjct: 123 TNVKGIANILRHFVPLMIQNNNGIIVNMSSGAGRSAHE 146

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g16890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PTALR_ARATH1.4e-2845.57NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 P... [more]
FABG_STAAR1.3e-1328.853-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain... [more]
FABG_STAAN1.3e-1328.853-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain... [more]
FABG_STAAM1.3e-1328.853-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain... [more]
FABG_STAAW1.3e-1328.853-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain... [more]
BLAST of Cp4.1LG01g16890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMF3_CUCSA7.4e-3246.99Uncharacterized protein OS=Cucumis sativus GN=Csa_5G002570 PE=3 SV=1[more]
A0A0A0LYI3_CUCSA2.9e-2848.77Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570190 PE=3 SV=1[more]
R0IE56_9BRAS3.8e-2845.24Uncharacterized protein OS=Capsella rubella GN=CARUB_v10011121mg PE=3 SV=1[more]
V4L7T6_EUTSA3.2e-2746.88Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10008625mg PE=3 SV=1[more]
D7KKP2_ARALL1.6e-2645.57Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA... [more]
BLAST of Cp4.1LG01g16890 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10310.18.1e-3045.57 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT3G55290.12.3e-0832.24 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT3G55310.18.7e-0831.58 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT1G24360.13.3e-0728.48 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT1G24470.14.8e-0623.33 beta-ketoacyl reductase 2[more]
BLAST of Cp4.1LG01g16890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129579|ref|XP_008464744.1|2.8e-3250.28PREDICTED: uncharacterized oxidoreductase YMR226C-like [Cucumis melo][more]
gi|449462820|ref|XP_004149138.1|4.8e-3250.28PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus][more]
gi|449462804|ref|XP_004149130.1|1.1e-3146.99PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus][more]
gi|659129571|ref|XP_008464740.1|3.4e-3050.00PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X1 [Cucumis melo][more]
gi|659129575|ref|XP_008464742.1|3.4e-3050.00PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR002347SDR_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0044699 single-organism process
biological_process GO:0044710 single-organism metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g16890.1Cp4.1LG01g16890.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 153..169
score: 9.7E-11coord: 18..35
score: 9.7E-11coord: 105..116
score: 9.7
IPR002347Short-chain dehydrogenase/reductase SDRPANTHERPTHR24322FAMILY NOT NAMEDcoord: 21..163
score: 3.4
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 43..106
score: 8.0E-15coord: 111..171
score: 1.6
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 5..43
score: 5.0E-7coord: 44..105
score: 1.2E-16coord: 111..170
score: 6.9
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 17..104
score: 2.57E-22coord: 110..170
score: 5.26
NoneNo IPR availablePANTHERPTHR24322:SF500SUBFAMILY NOT NAMEDcoord: 21..163
score: 3.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g16890CmoCh04G020420Cucurbita moschata (Rifu)cmocpeB686
Cp4.1LG01g16890Bhi07G000038Wax gourdcpewgoB0559
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g16890Cucumber (Chinese Long) v3cpecucB0557
Cp4.1LG01g16890Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g16890Cucurbita maxima (Rimu)cmacpeB732
Cp4.1LG01g16890Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g16890Wild cucumber (PI 183967)cpecpiB449
Cp4.1LG01g16890Cucumber (Chinese Long) v2cpecuB449
Cp4.1LG01g16890Bottle gourd (USVL1VR-Ls)cpelsiB319
Cp4.1LG01g16890Watermelon (Charleston Gray)cpewcgB365
Cp4.1LG01g16890Watermelon (Charleston Gray)cpewcgB369
Cp4.1LG01g16890Watermelon (97103) v1cpewmB455
Cp4.1LG01g16890Melon (DHL92) v3.5.1cpemeB374
Cp4.1LG01g16890Cucumber (Gy14) v2cgybcpeB663
Cp4.1LG01g16890Melon (DHL92) v3.6.1cpemedB433