Cp4.1LG01g16750 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g16750
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCytochrome c
LocationCp4.1LG01 : 10568345 .. 10571688 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGCTTTGACGAAGCCCCCCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCACAAGCAAGGTCCTTCTTTCTCTTACTCCATTAGGCTCTTCTTATTCATATGTAAGAATTTCTTTGCGATTGGAGATCATTTGGTCTCTGTTGGTAATATGAACGTATCCAACCGTCTTCGGGGATCGTGACGCTGATTTGAGCTAGCTTCAACCGATCTGATTGTTCTCTCTCTCTTTCTCTCCCCCCTCCCCAGCGCACTAGGTTTATAATAGTTAGTATCGGCCTTGATAAACACTTTTCGTGGAATCTCACTTGTCCTTGTCCGAGAAGGAAACCCCGAAGGCATATATATTTTGGTTATTTGATTTGATGAAACGAATTTTAACATTTAGAAACGTATACTATTATAGAAGCTATTACTAATATATCATATTTATATCTTTTTAAATTCTGGTTTTTTAGAAATTGTTATCATCTATTAACTTGGTATGATAAGGTGGTATGTTTTTGTTTGATGTGATAGACATTGTTCAATATAAATTCTGATCGAGGTTAACGATTTAATCTACATTTATCTGTGTCCATTTTTTGTATATTTTCTATTGTGGTTCTAGCTGCTATTCTTGTTATCTTATTTGTTATGATGATCAAGTTTTAACATCTCAACCTGGATGAAAATGTTGGGGTCTTAATTTAACAGAGATAAATGACCATTGAAGTATCGATTAAATGTCGGATGTAAATTTCTGGCTAAGTTACAAACAATGAATTCTAAACAAAAAAACATCGTGTAAATCAACATTTTTTAACTTTTAAAACAAGTTAAAATGACTATTTGACATTTTTTTTCCTCTTTTCTCTTTTTTTATTATTATAAATTTTTATGTTTCATGTTTTTTTTTTTAAATTGTATAATGGAAATGATGAATCACCCCTTTTGTTGATGTCAAATCCATGGATGTGGAAATATCGATGGAAATGTTGAGTCGATGGAAATTTAATTTACTGATAATGATTATATTTGACACTTTTAATTGGAGTAGAATTTGATCTCACCCCCCCGCTGGGTCATGGGGGAAAATCAGCTCTTCTTTGTTAGTATTTAAGTCGACACTAAAACTAGCAACGTCACTTGGATCTTGCAGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGGTAGATACTCTCTATTTCTTAACACTTCTTAACGTATGGCATTTGATTTAGAGTTGGTTTATTTCCCTGAGTTTTCCAGATGTCTTACTTGCCGATTAAGTGAAAATAATTGTGAACACACACCTAAATAAGCGTTGCCATGTTCTGTACTTGCTATCGGTAGCCTTGTTCTTCATAATACTTGTCCAACTGAGCAACAACTGATGAAATATTTTGGGCTCTTCGATCAACATGTCCCACCTTTTACCATCTTCTCCCTGGAGCTTTGTTAAAGTACTTTTTTTAAACATTTCAAATAGCTTCAATTAAAAGTTATCCATGGAATCTTGCACCTTTTCTACTTTAATATAGTCAAAACAAAGCCTCCCCCCACTTGGAGTTTCAATCTTGATTTAAGCTAGAATCAAAATCACCCTTAAAATTTCTCTCTTATATCTGAATATGCTTCAGACAATCTAGCATGTTAATATTTTTTTTAGCACATTGAATTTCATGATTTTCTCCAATGGCGTCTTAAGTCTCCATTAATAGAAAACACACTGGTCTCAACATAACCTAATGGTGAACCTGCACATTTGGGCATTAGTTGCGTTCCCCCCCTTGATCTTTCTTGTCCTCCTTTTGTGGCTGGGTTTGTCCCGAGTCCTGTTCTCTTATTGGAAATCCTTGTTCACCCATAAGTTTCAATGGCTTTGGTTGGTGGAAAATTTGGTCTCTTCTTTTGCCACTCTTATTTCATGGACATAATTACGAAGGGAGCAAAAATTTCTTCTCTGCTCTCAGTTTGGCATGAAAGATACTCAAAAGCTTCCAAAGAAAGTGAAATAATCTTGGTGGTAACTTTTGAGTGGAAGTATCAACTCTTGCTACATCATTTATAAAATGTGTCTTCAGAGCTGTATTTCACCAGGTTGGTCTTCTGTGTCGGAGTCCCTAGGCAATCTCCCTTTTTTTGGAAACTTGTAATGGCACTACTACTCAGATGTGGTTGGTTCTTGACCTCCTTCCCTTAAAGACACTAAAGTCCTTTCTCTTTGTTCCTTGAAGGTCATTCTTTCAAAAGTGAAAAGGTTTTGTGCATCAATGAATTGTGGGTTATTTTTGGCTTTTATGGCTCAAAGGGAAAGGAACACCACCGTTGTTTATAACAACGGAAAACCCATGTTTGGCTCATGGCTTTTAATTGAATCACCGCTGTATATTATCCATTTAATATGTTAAAAGTAAAATTATACATAAAACTTTGTTGAATATATCATAATATTTCTGTTTTGTAATAGATAAGTAATTTCTAAGTAAAATAATACCATTGTCAGGCCTTAATCTTTTTGAATAATTATTTTGAAATATAAATATTTAGTAACTTCTCAAATTGTTGGTATGAGTTTTTTAGCATATGAATCTTTGTTTAATAGTGTTCTAAACTCTTATGCTTGCTATGGTTTTGAGGAATGCGAAGTTGTCAATTTTGAGTGCTCTCAACTCCATGAATTTTGTAGACGTTCTAACAAAAATTTTGCTGTCTATTATCACACAGTATATACCCGGAACGAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAATGATACGGTGCTTCCGCCTGTCTAGAATTTGTTCACACCCTTTTTACTCCCTTCATTAAATAAGAACATTGAGGTTAGATGGAAATTTGGAGGTCACGTACAAAGTAATTCTCTGTCAGACAGATTTGTCTTGTGAAAATCACAAGAGTTCCCTTTTTTTCATTAAATTCTTATTTCCCTTCGCTATTATACATCATTTGCAGAGTTCATCCATTTGTAGCTTACGTTGTTGGTTTGTGAACATAACTGCTAAACTTTTTGGCAAAGCCGGTTATGGCAATCTTTTTTTCATAATAAATAGCACGCTTGTAAGAACCTATCAATTCATTCATCAATGCTTTATTAGAAAGAATACGCTTATGGTGGATATAATTTTGGTATTTTTGCAA

mRNA sequence

ATGGCGAGCTTTGACGAAGCCCCCCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCACAAGCAAGGTCCTTCTTTCTCTTACTCCATTAGGCTCTTCTTATTCATATGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGTATATACCCGGAACGAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAATGATACGGTGCTTCCGCCTGTCTAGAATTTGTTCACACCCTTTTTACTCCCTTCATTAAATAAGAACATTGAGGTTAGATGGAAATTTGGAGGTCACGTACAAAGTAATTCTCTGTCAGACAGATTTGTCTTGTGAAAATCACAAGAGTTCCCTTTTTTTCATTAAATTCTTATTTCCCTTCGCTATTATACATCATTTGCAGAGTTCATCCATTTGTAGCTTACGTTGTTGGTTTGTGAACATAACTGCTAAACTTTTTGGCAAAGCCGGTTATGGCAATCTTTTTTTCATAATAAATAGCACGCTTGTAAGAACCTATCAATTCATTCATCAATGCTTTATTAGAAAGAATACGCTTATGGTGGATATAATTTTGGTATTTTTGCAA

Coding sequence (CDS)

ATGGCGAGCTTTGACGAAGCCCCCCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCACAAGCAAGGTCCTTCTTTCTCTTACTCCATTAGGCTCTTCTTATTCATATGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGTATATACCCGGAACGAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAA

Protein sequence

MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA
Homology
[Close]
BLAST of Cp4.1LG01g16750 vs. Swiss-Prot
Match: CYC_CUCMA (Cytochrome c OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 8.2e-58
Identity = 109/125 (87.20%), Postives = 110/125 (88.00%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFGR 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFGR
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFGR 60

Query: 62  QSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 121
           QSGTTPGYSYSAANKN AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL
Sbjct: 61  QSGTTPGYSYSAANKNRAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 111

Query: 122 KESTA 127
           KE+TA
Sbjct: 121 KEATA 111

[Close]
BLAST of Cp4.1LG01g16750 vs. Swiss-Prot
Match: CYC_VIGRR (Cytochrome c OS=Vigna radiata var. radiata PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.1e-57
Identity = 108/125 (86.40%), Postives = 109/125 (87.20%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFGR 61
           ASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFGR
Sbjct: 1   ASFDEAPPGNSKSGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFGR 60

Query: 62  QSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 121
           QSGTT GYSYS ANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL
Sbjct: 61  QSGTTAGYSYSTANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 111

Query: 122 KESTA 127
           KESTA
Sbjct: 121 KESTA 111

[Close]
BLAST of Cp4.1LG01g16750 vs. Swiss-Prot
Match: CYC2_ARATH (Cytochrome c-2 OS=Arabidopsis thaliana GN=CYTC-2 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.6e-56
Identity = 106/126 (84.13%), Postives = 109/126 (86.51%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVEKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKSMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 127
           LKE TA
Sbjct: 121 LKEGTA 112

[Close]
BLAST of Cp4.1LG01g16750 vs. Swiss-Prot
Match: CYC_BRAOL (Cytochrome c OS=Brassica oleracea PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 4.5e-56
Identity = 107/125 (85.60%), Postives = 108/125 (86.40%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFGR 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFGR
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFGR 60

Query: 62  QSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 121
           QSGTT GYSYSAANKN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL
Sbjct: 61  QSGTTAGYSYSAANKNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 111

Query: 122 KESTA 127
           KE+TA
Sbjct: 121 KEATA 111

[Close]
BLAST of Cp4.1LG01g16750 vs. Swiss-Prot
Match: CYC_BRANA (Cytochrome c OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 4.5e-56
Identity = 107/125 (85.60%), Postives = 108/125 (86.40%), Query Frame = 1 

Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFGR 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFGR
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFGR 60

Query: 62  QSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 121
           QSGTT GYSYSAANKN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL
Sbjct: 61  QSGTTAGYSYSAANKNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 111

Query: 122 KESTA 127
           KE+TA
Sbjct: 121 KEATA 111

[Close]
BLAST of Cp4.1LG01g16750 vs. TrEMBL
Match: A0A0A0KPD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G244150 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-56
Identity = 110/125 (88.00%), Postives = 110/125 (88.00%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 111

Query: 121 LKEST 126
           LKEST
Sbjct: 121 LKEST 111

[Close]
BLAST of Cp4.1LG01g16750 vs. TrEMBL
Match: A0A151TAR6_CAJCA (Putative cytochrome c At4g10040 family OS=Cajanus cajan GN=KK1_018728 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-56
Identity = 110/126 (87.30%), Postives = 111/126 (88.10%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 127
           LKESTA
Sbjct: 121 LKESTA 112

[Close]
BLAST of Cp4.1LG01g16750 vs. TrEMBL
Match: A0A0D2TSA5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G266800 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.3e-56
Identity = 108/126 (85.71%), Postives = 112/126 (88.89%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASF++APPGN+KAGEKIFKTKC+QCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFEQAPPGNAKAGEKIFKTKCSQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 127
           LKESTA
Sbjct: 121 LKESTA 112

[Close]
BLAST of Cp4.1LG01g16750 vs. TrEMBL
Match: C6TJ91_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G246700 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 7.0e-56
Identity = 109/126 (86.51%), Postives = 110/126 (87.30%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKNGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYS ANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAY
Sbjct: 61  RQSGTTPGYSYSTANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAY 112

Query: 121 LKESTA 127
           LKESTA
Sbjct: 121 LKESTA 112

[Close]
BLAST of Cp4.1LG01g16750 vs. TrEMBL
Match: A0A0B2QL57_GLYSO (Cytochrome c OS=Glycine soja GN=glysoja_042898 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 7.0e-56
Identity = 109/126 (86.51%), Postives = 110/126 (87.30%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKNGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYS ANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAY
Sbjct: 61  RQSGTTPGYSYSTANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAY 112

Query: 121 LKESTA 127
           LKESTA
Sbjct: 121 LKESTA 112

[Close]
BLAST of Cp4.1LG01g16750 vs. TAIR10
Match: AT4G10040.1 (AT4G10040.1 cytochrome c-2)

HSP 1 Score: 219.2 bits (557), Expect = 1.5e-57
Identity = 106/126 (84.13%), Postives = 109/126 (86.51%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVEKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKSMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 127
           LKE TA
Sbjct: 121 LKEGTA 112

[Close]
BLAST of Cp4.1LG01g16750 vs. TAIR10
Match: AT1G22840.1 (AT1G22840.1 CYTOCHROME C-1)

HSP 1 Score: 213.8 bits (543), Expect = 6.2e-56
Identity = 104/126 (82.54%), Postives = 107/126 (84.92%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNAKAGEKIFRTKCAQCHTVEAGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTT GYSYSAANKN AV WEEK LYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTAGYSYSAANKNKAVEWEEKALYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 127
           LKESTA
Sbjct: 121 LKESTA 112

[Close]
BLAST of Cp4.1LG01g16750 vs. NCBI nr
Match: gi|449457373|ref|XP_004146423.1| (PREDICTED: cytochrome c [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 2.0e-56
Identity = 110/125 (88.00%), Postives = 110/125 (88.00%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 111

Query: 121 LKEST 126
           LKEST
Sbjct: 121 LKEST 111

[Close]
BLAST of Cp4.1LG01g16750 vs. NCBI nr
Match: gi|1012352951|gb|KYP64139.1| (putative cytochrome c At4g10040 family [Cajanus cajan])

HSP 1 Score: 226.9 bits (577), Expect = 2.0e-56
Identity = 110/126 (87.30%), Postives = 111/126 (88.10%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 127
           LKESTA
Sbjct: 121 LKESTA 112

[Close]
BLAST of Cp4.1LG01g16750 vs. NCBI nr
Match: gi|659102910|ref|XP_008452381.1| (PREDICTED: cytochrome c [Cucumis melo])

HSP 1 Score: 226.9 bits (577), Expect = 2.0e-56
Identity = 110/126 (87.30%), Postives = 111/126 (88.10%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAY 112

Query: 121 LKESTA 127
           LKESTA
Sbjct: 121 LKESTA 112

[Close]
BLAST of Cp4.1LG01g16750 vs. NCBI nr
Match: gi|823227200|ref|XP_012446433.1| (PREDICTED: cytochrome c [Gossypium raimondii])

HSP 1 Score: 224.9 bits (572), Expect = 7.7e-56
Identity = 108/126 (85.71%), Postives = 112/126 (88.89%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASF++APPGN+KAGEKIFKTKC+QCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFEQAPPGNAKAGEKIFKTKCSQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 127
           LKESTA
Sbjct: 121 LKESTA 112

[Close]
BLAST of Cp4.1LG01g16750 vs. NCBI nr
Match: gi|729296184|ref|XP_010542745.1| (PREDICTED: cytochrome c [Tarenaya hassleriana])

HSP 1 Score: 224.9 bits (572), Expect = 7.7e-56
Identity = 108/126 (85.71%), Postives = 112/126 (88.89%), Query Frame = 1 

Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSKAGEKIF+TKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKAGEKIFRTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAV+WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVMWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAY 112

Query: 121 LKESTA 127
           LKE+TA
Sbjct: 121 LKEATA 112

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g16750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CYC_CUCMA8.2e-5887.20Cytochrome c OS=Cucurbita maxima PE=1 SV=1[more]
CYC_VIGRR4.1e-5786.40Cytochrome c OS=Vigna radiata var. radiata PE=1 SV=1[more]
CYC2_ARATH2.6e-5684.13Cytochrome c-2 OS=Arabidopsis thaliana GN=CYTC-2 PE=1 SV=1[more]
CYC_BRAOL4.5e-5685.60Cytochrome c OS=Brassica oleracea PE=1 SV=1[more]
CYC_BRANA4.5e-5685.60Cytochrome c OS=Brassica napus PE=1 SV=1[more]
BLAST of Cp4.1LG01g16750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPD8_CUCSA1.4e-5688.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G244150 PE=3 SV=1[more]
A0A151TAR6_CAJCA1.4e-5687.30Putative cytochrome c At4g10040 family OS=Cajanus cajan GN=KK1_018728 PE=3 SV=1[more]
A0A0D2TSA5_GOSRA5.3e-5685.71Uncharacterized protein OS=Gossypium raimondii GN=B456_009G266800 PE=3 SV=1[more]
C6TJ91_SOYBN7.0e-5686.51Uncharacterized protein OS=Glycine max GN=GLYMA_09G246700 PE=2 SV=1[more]
A0A0B2QL57_GLYSO7.0e-5686.51Cytochrome c OS=Glycine soja GN=glysoja_042898 PE=3 SV=1[more]
BLAST of Cp4.1LG01g16750 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10040.11.5e-5784.13 cytochrome c-2[more]
AT1G22840.16.2e-5682.54 CYTOCHROME C-1[more]
BLAST of Cp4.1LG01g16750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457373|ref|XP_004146423.1|2.0e-5688.00PREDICTED: cytochrome c [Cucumis sativus][more]
gi|1012352951|gb|KYP64139.1|2.0e-5687.30putative cytochrome c At4g10040 family [Cajanus cajan][more]
gi|659102910|ref|XP_008452381.1|2.0e-5687.30PREDICTED: cytochrome c [Cucumis melo][more]
gi|823227200|ref|XP_012446433.1|7.7e-5685.71PREDICTED: cytochrome c [Gossypium raimondii][more]
gi|729296184|ref|XP_010542745.1|7.7e-5685.71PREDICTED: cytochrome c [Tarenaya hassleriana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0009055electron carrier activity
Vocabulary: INTERPRO
TermDefinition
IPR009056Cyt_c-like_dom
IPR002327Cyt_c_1A/1B
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005758 mitochondrial intermembrane space
cellular_component GO:0070469 respiratory chain
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0020037 heme binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g16750.1Cp4.1LG01g16750.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002327Cytochrome c, class IA/ IBPRINTSPR00604CYTCHRMECIABcoord: 98..108
score: 1.3E-11coord: 115..123
score: 1.3E-11coord: 22..29
score: 1.3
IPR002327Cytochrome c, class IA/ IBPANTHERPTHR11961CYTOCHROME Ccoord: 1..126
score: 3.5
IPR009056Cytochrome c-like domainGENE3DG3DSA:1.10.760.10coord: 52..124
score: 4.1E-29coord: 9..41
score: 2.
IPR009056Cytochrome c-like domainPFAMPF00034Cytochrom_Ccoord: 13..123
score: 4.6
IPR009056Cytochrome c-like domainPROFILEPS51007CYTCcoord: 10..125
score: 13
IPR009056Cytochrome c-like domainunknownSSF46626Cytochrome ccoord: 9..122
score: 2.97
NoneNo IPR availablePANTHERPTHR11961:SF8SUBFAMILY NOT NAMEDcoord: 1..126
score: 3.5

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g16750Bottle gourd (USVL1VR-Ls)cpelsiB319
Cp4.1LG01g16750Watermelon (Charleston Gray)cpewcgB365
Cp4.1LG01g16750Watermelon (Charleston Gray)cpewcgB369
Cp4.1LG01g16750Watermelon (97103) v1cpewmB455
Cp4.1LG01g16750Silver-seed gourdcarcpeB1026
Cp4.1LG01g16750Wax gourdcpewgoB0559
Cp4.1LG01g16750Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g16750Cucurbita maxima (Rimu)cmacpeB732
Cp4.1LG01g16750Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g16750Cucurbita moschata (Rifu)cmocpeB686